AlfalfaGEDB | MS.gene99819

M. sativa cultivar XinJiangDaYe / MS.gene99819

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene99819.t1	XP_003596633.1	97.2	215	6	0	1	215	1	215	2.70E-108	401.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene99819.t1	G7IJL4	97.2	215	6	0	1	215	1	215	2.0e-108	401.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049134	MS.gene99819	-0.80185	7.41E-49	-1.69E-46
MS.gene049137	MS.gene99819	0.838088	3.54E-57	-1.69E-46
MS.gene049284	MS.gene99819	0.820104	8.18E-53	-1.69E-46
MS.gene049346	MS.gene99819	0.831068	2.06E-55	-1.69E-46
MS.gene049351	MS.gene99819	0.885407	8.35E-72	-1.69E-46
MS.gene049389	MS.gene99819	0.808157	3.56E-50	-1.69E-46
MS.gene049427	MS.gene99819	0.884735	1.49E-71	-1.69E-46
MS.gene049491	MS.gene99819	0.848571	5.63E-60	-1.69E-46
MS.gene049609	MS.gene99819	0.810221	1.28E-50	-1.69E-46
MS.gene049661	MS.gene99819	0.884556	1.73E-71	-1.69E-46
MS.gene049662	MS.gene99819	0.877346	6.77E-69	-1.69E-46
MS.gene049758	MS.gene99819	0.8683	7.24E-66	-1.69E-46
MS.gene049760	MS.gene99819	0.828074	1.10E-54	-1.69E-46
MS.gene049805	MS.gene99819	0.845969	2.91E-59	-1.69E-46
MS.gene049910	MS.gene99819	0.823755	1.17E-53	-1.69E-46
MS.gene050076	MS.gene99819	0.887557	1.29E-72	-1.69E-46
MS.gene050099	MS.gene99819	0.818393	2.01E-52	-1.69E-46
MS.gene050231	MS.gene99819	0.818403	2.00E-52	-1.69E-46
MS.gene050301	MS.gene99819	0.912606	1.61E-83	-1.69E-46
MS.gene050397	MS.gene99819	0.884949	1.24E-71	-1.69E-46
MS.gene050406	MS.gene99819	0.835032	2.12E-56	-1.69E-46
MS.gene050426	MS.gene99819	-0.802051	6.74E-49	-1.69E-46
MS.gene050432	MS.gene99819	0.898168	6.91E-77	-1.69E-46
MS.gene050464	MS.gene99819	0.885112	1.08E-71	-1.69E-46
MS.gene050529	MS.gene99819	0.890959	6.14E-74	-1.69E-46
MS.gene050558	MS.gene99819	0.810439	1.15E-50	-1.69E-46
MS.gene050593	MS.gene99819	0.856611	2.86E-62	-1.69E-46
MS.gene050670	MS.gene99819	0.899973	1.17E-77	-1.69E-46
MS.gene050767	MS.gene99819	0.841041	6.04E-58	-1.69E-46
MS.gene050770	MS.gene99819	0.841879	3.63E-58	-1.69E-46
MS.gene050783	MS.gene99819	0.863083	3.21E-64	-1.69E-46
MS.gene050812	MS.gene99819	0.845395	4.17E-59	-1.69E-46
MS.gene05101	MS.gene99819	0.909012	9.11E-82	-1.69E-46
MS.gene05105	MS.gene99819	0.878752	2.18E-69	-1.69E-46
MS.gene051255	MS.gene99819	0.802535	5.36E-49	-1.69E-46
MS.gene051387	MS.gene99819	0.883693	3.62E-71	-1.69E-46
MS.gene051471	MS.gene99819	0.869992	2.04E-66	-1.69E-46
MS.gene051525	MS.gene99819	0.846988	1.54E-59	-1.69E-46
MS.gene051582	MS.gene99819	0.907708	3.78E-81	-1.69E-46
MS.gene051663	MS.gene99819	0.820337	7.23E-53	-1.69E-46
MS.gene051666	MS.gene99819	0.856464	3.16E-62	-1.69E-46
MS.gene051692	MS.gene99819	0.83821	3.29E-57	-1.69E-46
MS.gene051860	MS.gene99819	0.845391	4.18E-59	-1.69E-46
MS.gene051877	MS.gene99819	0.866414	2.90E-65	-1.69E-46
MS.gene052011	MS.gene99819	-0.84216	3.06E-58	-1.69E-46
MS.gene052077	MS.gene99819	0.816224	6.17E-52	-1.69E-46
MS.gene052078	MS.gene99819	0.88712	1.89E-72	-1.69E-46
MS.gene052178	MS.gene99819	0.826984	2.01E-54	-1.69E-46
MS.gene052188	MS.gene99819	0.862968	3.48E-64	-1.69E-46
MS.gene052207	MS.gene99819	0.813021	3.16E-51	-1.69E-46
MS.gene052253	MS.gene99819	0.887837	1.00E-72	-1.69E-46
MS.gene052310	MS.gene99819	0.907163	6.82E-81	-1.69E-46
MS.gene052322	MS.gene99819	0.866384	2.96E-65	-1.69E-46
MS.gene052326	MS.gene99819	0.87801	3.97E-69	-1.69E-46
MS.gene052340	MS.gene99819	0.864715	9.96E-65	-1.69E-46
MS.gene052379	MS.gene99819	0.808293	3.33E-50	-1.69E-46
MS.gene052421	MS.gene99819	0.862195	6.02E-64	-1.69E-46
MS.gene052481	MS.gene99819	0.893915	4.03E-75	-1.69E-46
MS.gene052484	MS.gene99819	0.852563	4.25E-61	-1.69E-46
MS.gene052485	MS.gene99819	0.888471	5.73E-73	-1.69E-46
MS.gene052501	MS.gene99819	0.801244	9.87E-49	-1.69E-46
MS.gene052505	MS.gene99819	0.818981	1.48E-52	-1.69E-46
MS.gene052508	MS.gene99819	0.800059	1.72E-48	-1.69E-46
MS.gene052615	MS.gene99819	0.811821	5.78E-51	-1.69E-46
MS.gene052982	MS.gene99819	0.841406	4.84E-58	-1.69E-46
MS.gene053103	MS.gene99819	0.85657	2.94E-62	-1.69E-46
MS.gene053104	MS.gene99819	0.834401	3.06E-56	-1.69E-46
MS.gene053107	MS.gene99819	0.844079	9.44E-59	-1.69E-46
MS.gene053207	MS.gene99819	0.808273	3.36E-50	-1.69E-46
MS.gene053209	MS.gene99819	0.860816	1.59E-63	-1.69E-46
MS.gene053213	MS.gene99819	0.805302	1.43E-49	-1.69E-46
MS.gene053322	MS.gene99819	0.871432	6.86E-67	-1.69E-46
MS.gene053557	MS.gene99819	0.837186	6.03E-57	-1.69E-46
MS.gene053579	MS.gene99819	0.81019	1.30E-50	-1.69E-46
MS.gene053758	MS.gene99819	0.809797	1.58E-50	-1.69E-46
MS.gene053813	MS.gene99819	0.824669	7.12E-54	-1.69E-46
MS.gene053836	MS.gene99819	0.898951	3.21E-77	-1.69E-46
MS.gene053907	MS.gene99819	0.817997	2.47E-52	-1.69E-46
MS.gene053928	MS.gene99819	0.824965	6.06E-54	-1.69E-46
MS.gene053971	MS.gene99819	0.839752	1.31E-57	-1.69E-46
MS.gene054010	MS.gene99819	0.819023	1.44E-52	-1.69E-46
MS.gene054011	MS.gene99819	0.824717	6.94E-54	-1.69E-46
MS.gene054012	MS.gene99819	0.814587	1.43E-51	-1.69E-46
MS.gene054013	MS.gene99819	0.810714	1.00E-50	-1.69E-46
MS.gene054123	MS.gene99819	0.859631	3.62E-63	-1.69E-46
MS.gene054183	MS.gene99819	0.819256	1.28E-52	-1.69E-46
MS.gene054376	MS.gene99819	0.862104	6.42E-64	-1.69E-46
MS.gene054473	MS.gene99819	0.841585	4.35E-58	-1.69E-46
MS.gene05455	MS.gene99819	0.874532	6.28E-68	-1.69E-46
MS.gene054719	MS.gene99819	0.807233	5.59E-50	-1.69E-46
MS.gene054802	MS.gene99819	0.870486	1.41E-66	-1.69E-46
MS.gene054803	MS.gene99819	0.866862	2.09E-65	-1.69E-46
MS.gene054804	MS.gene99819	0.869964	2.09E-66	-1.69E-46
MS.gene054918	MS.gene99819	0.826246	3.01E-54	-1.69E-46
MS.gene054955	MS.gene99819	0.841059	5.98E-58	-1.69E-46
MS.gene054983	MS.gene99819	0.816323	5.87E-52	-1.69E-46
MS.gene05505	MS.gene99819	0.836749	7.80E-57	-1.69E-46
MS.gene055116	MS.gene99819	0.902064	1.42E-78	-1.69E-46
MS.gene055206	MS.gene99819	0.800145	1.65E-48	-1.69E-46
MS.gene055277	MS.gene99819	0.916202	2.36E-85	-1.69E-46
MS.gene055289	MS.gene99819	0.803639	3.17E-49	-1.69E-46
MS.gene055303	MS.gene99819	0.808455	3.07E-50	-1.69E-46
MS.gene055369	MS.gene99819	0.824794	6.66E-54	-1.69E-46
MS.gene055370	MS.gene99819	0.814865	1.24E-51	-1.69E-46
MS.gene055390	MS.gene99819	0.886904	2.28E-72	-1.69E-46
MS.gene055397	MS.gene99819	0.818307	2.10E-52	-1.69E-46
MS.gene055412	MS.gene99819	0.84543	4.08E-59	-1.69E-46
MS.gene055422	MS.gene99819	0.893715	4.86E-75	-1.69E-46
MS.gene055428	MS.gene99819	0.905102	6.12E-80	-1.69E-46
MS.gene055499	MS.gene99819	0.836718	7.94E-57	-1.69E-46
MS.gene055533	MS.gene99819	0.830662	2.59E-55	-1.69E-46
MS.gene05553	MS.gene99819	0.850829	1.32E-60	-1.69E-46
MS.gene055564	MS.gene99819	0.856439	3.21E-62	-1.69E-46
MS.gene055604	MS.gene99819	0.833806	4.32E-56	-1.69E-46
MS.gene055647	MS.gene99819	0.829875	4.03E-55	-1.69E-46
MS.gene055712	MS.gene99819	0.825212	5.30E-54	-1.69E-46
MS.gene055896	MS.gene99819	0.83853	2.72E-57	-1.69E-46
MS.gene05592	MS.gene99819	0.828492	8.73E-55	-1.69E-46
MS.gene05594	MS.gene99819	0.846469	2.13E-59	-1.69E-46
MS.gene05602	MS.gene99819	0.812113	4.99E-51	-1.69E-46
MS.gene056191	MS.gene99819	0.883905	3.02E-71	-1.69E-46
MS.gene056337	MS.gene99819	0.815606	8.48E-52	-1.69E-46
MS.gene056407	MS.gene99819	0.916317	2.06E-85	-1.69E-46
MS.gene056410	MS.gene99819	0.856188	3.81E-62	-1.69E-46
MS.gene056451	MS.gene99819	0.840139	1.04E-57	-1.69E-46
MS.gene056452	MS.gene99819	0.840792	7.02E-58	-1.69E-46
MS.gene056497	MS.gene99819	0.808276	3.35E-50	-1.69E-46
MS.gene056511	MS.gene99819	0.857244	1.86E-62	-1.69E-46
MS.gene056609	MS.gene99819	0.82286	1.89E-53	-1.69E-46
MS.gene056612	MS.gene99819	0.877011	8.84E-69	-1.69E-46
MS.gene056659	MS.gene99819	0.816108	6.55E-52	-1.69E-46
MS.gene056723	MS.gene99819	0.84353	1.32E-58	-1.69E-46
MS.gene056796	MS.gene99819	0.8633	2.75E-64	-1.69E-46
MS.gene056846	MS.gene99819	0.829538	4.87E-55	-1.69E-46
MS.gene056897	MS.gene99819	0.803822	2.90E-49	-1.69E-46
MS.gene056899	MS.gene99819	-0.832593	8.65E-56	-1.69E-46
MS.gene056902	MS.gene99819	0.809523	1.81E-50	-1.69E-46
MS.gene056931	MS.gene99819	0.806558	7.76E-50	-1.69E-46
MS.gene056933	MS.gene99819	0.804455	2.14E-49	-1.69E-46
MS.gene056935	MS.gene99819	0.805124	1.55E-49	-1.69E-46
MS.gene057011	MS.gene99819	0.890888	6.55E-74	-1.69E-46
MS.gene05702	MS.gene99819	0.900758	5.32E-78	-1.69E-46
MS.gene057121	MS.gene99819	0.864236	1.41E-64	-1.69E-46
MS.gene057123	MS.gene99819	0.875477	2.99E-68	-1.69E-46
MS.gene057124	MS.gene99819	0.847201	1.34E-59	-1.69E-46
MS.gene057129	MS.gene99819	0.839338	1.68E-57	-1.69E-46
MS.gene057146	MS.gene99819	0.886042	4.82E-72	-1.69E-46
MS.gene057196	MS.gene99819	0.804187	2.44E-49	-1.69E-46
MS.gene057245	MS.gene99819	0.846306	2.36E-59	-1.69E-46
MS.gene057295	MS.gene99819	0.833396	5.46E-56	-1.69E-46
MS.gene057310	MS.gene99819	0.806072	9.82E-50	-1.69E-46
MS.gene057331	MS.gene99819	0.814587	1.43E-51	-1.69E-46
MS.gene05733	MS.gene99819	0.835991	1.22E-56	-1.69E-46
MS.gene057396	MS.gene99819	0.806523	7.89E-50	-1.69E-46
MS.gene057416	MS.gene99819	0.849855	2.47E-60	-1.69E-46
MS.gene057439	MS.gene99819	0.816492	5.38E-52	-1.69E-46
MS.gene057448	MS.gene99819	0.838614	2.59E-57	-1.69E-46
MS.gene057449	MS.gene99819	0.841459	4.69E-58	-1.69E-46
MS.gene057450	MS.gene99819	0.841813	3.78E-58	-1.69E-46
MS.gene057469	MS.gene99819	0.810782	9.71E-51	-1.69E-46
MS.gene057476	MS.gene99819	0.819162	1.34E-52	-1.69E-46
MS.gene057749	MS.gene99819	0.874305	7.49E-68	-1.69E-46
MS.gene057779	MS.gene99819	0.803248	3.82E-49	-1.69E-46
MS.gene057823	MS.gene99819	0.869817	2.33E-66	-1.69E-46
MS.gene057825	MS.gene99819	0.817237	3.66E-52	-1.69E-46
MS.gene057845	MS.gene99819	0.813571	2.39E-51	-1.69E-46
MS.gene058002	MS.gene99819	0.902054	1.43E-78	-1.69E-46
MS.gene058006	MS.gene99819	0.831882	1.30E-55	-1.69E-46
MS.gene058007	MS.gene99819	0.821746	3.43E-53	-1.69E-46
MS.gene058019	MS.gene99819	0.867315	1.50E-65	-1.69E-46
MS.gene058082	MS.gene99819	0.821687	3.54E-53	-1.69E-46
MS.gene05811	MS.gene99819	0.870101	1.88E-66	-1.69E-46
MS.gene058142	MS.gene99819	0.830982	2.16E-55	-1.69E-46
MS.gene058233	MS.gene99819	0.896497	3.49E-76	-1.69E-46
MS.gene058276	MS.gene99819	0.834795	2.44E-56	-1.69E-46
MS.gene058293	MS.gene99819	0.899727	1.49E-77	-1.69E-46
MS.gene058323	MS.gene99819	0.817526	3.15E-52	-1.69E-46
MS.gene058365	MS.gene99819	0.833517	5.10E-56	-1.69E-46
MS.gene058376	MS.gene99819	0.805725	1.16E-49	-1.69E-46
MS.gene05842	MS.gene99819	0.82255	2.23E-53	-1.69E-46
MS.gene058660	MS.gene99819	0.938976	2.75E-99	-1.69E-46
MS.gene058700	MS.gene99819	0.824439	8.07E-54	-1.69E-46
MS.gene058710	MS.gene99819	0.802484	5.49E-49	-1.69E-46
MS.gene058787	MS.gene99819	0.838106	3.50E-57	-1.69E-46
MS.gene05883	MS.gene99819	0.809465	1.87E-50	-1.69E-46
MS.gene058845	MS.gene99819	0.807571	4.74E-50	-1.69E-46
MS.gene05886	MS.gene99819	0.848488	5.94E-60	-1.69E-46
MS.gene058928	MS.gene99819	0.855152	7.64E-62	-1.69E-46
MS.gene058993	MS.gene99819	0.8239	1.08E-53	-1.69E-46
MS.gene058995	MS.gene99819	0.830019	3.72E-55	-1.69E-46
MS.gene059011	MS.gene99819	0.802476	5.51E-49	-1.69E-46
MS.gene05907	MS.gene99819	0.915042	9.41E-85	-1.69E-46
MS.gene059082	MS.gene99819	0.80195	7.07E-49	-1.69E-46
MS.gene059141	MS.gene99819	0.883329	4.92E-71	-1.69E-46
MS.gene059285	MS.gene99819	0.801545	8.56E-49	-1.69E-46
MS.gene059294	MS.gene99819	0.830837	2.35E-55	-1.69E-46
MS.gene059326	MS.gene99819	0.840723	7.32E-58	-1.69E-46
MS.gene05934	MS.gene99819	0.818572	1.83E-52	-1.69E-46
MS.gene059366	MS.gene99819	0.815927	7.19E-52	-1.69E-46
MS.gene059420	MS.gene99819	0.869873	2.23E-66	-1.69E-46
MS.gene059462	MS.gene99819	0.820388	7.04E-53	-1.69E-46
MS.gene059518	MS.gene99819	0.835284	1.84E-56	-1.69E-46
MS.gene059536	MS.gene99819	0.892506	1.49E-74	-1.69E-46
MS.gene059597	MS.gene99819	0.892529	1.46E-74	-1.69E-46
MS.gene05959	MS.gene99819	0.826078	3.30E-54	-1.69E-46
MS.gene059676	MS.gene99819	0.895049	1.39E-75	-1.69E-46
MS.gene059688	MS.gene99819	0.916545	1.57E-85	-1.69E-46
MS.gene059692	MS.gene99819	0.90856	1.50E-81	-1.69E-46
MS.gene059695	MS.gene99819	0.914019	3.13E-84	-1.69E-46
MS.gene059708	MS.gene99819	0.815074	1.11E-51	-1.69E-46
MS.gene05984	MS.gene99819	0.859623	3.64E-63	-1.69E-46
MS.gene059894	MS.gene99819	0.86038	2.15E-63	-1.69E-46
MS.gene059960	MS.gene99819	0.881317	2.65E-70	-1.69E-46
MS.gene060193	MS.gene99819	0.817304	3.53E-52	-1.69E-46
MS.gene06037	MS.gene99819	0.861124	1.28E-63	-1.69E-46
MS.gene060403	MS.gene99819	0.901297	3.09E-78	-1.69E-46
MS.gene060407	MS.gene99819	0.8415	4.58E-58	-1.69E-46
MS.gene060559	MS.gene99819	0.816394	5.66E-52	-1.69E-46
MS.gene060804	MS.gene99819	0.879536	1.15E-69	-1.69E-46
MS.gene060818	MS.gene99819	0.821635	3.64E-53	-1.69E-46
MS.gene060835	MS.gene99819	0.806613	7.56E-50	-1.69E-46
MS.gene060837	MS.gene99819	0.836954	6.91E-57	-1.69E-46
MS.gene06090	MS.gene99819	0.846122	2.65E-59	-1.69E-46
MS.gene06092	MS.gene99819	0.810765	9.79E-51	-1.69E-46
MS.gene060986	MS.gene99819	0.819367	1.21E-52	-1.69E-46
MS.gene061041	MS.gene99819	0.834779	2.46E-56	-1.69E-46
MS.gene061049	MS.gene99819	0.901258	3.21E-78	-1.69E-46
MS.gene061051	MS.gene99819	-0.869018	4.24E-66	-1.69E-46
MS.gene061154	MS.gene99819	0.840013	1.12E-57	-1.69E-46
MS.gene061159	MS.gene99819	0.827365	1.63E-54	-1.69E-46
MS.gene061200	MS.gene99819	0.868461	6.42E-66	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene99819.t1	MTR_2g082930	97.209	215	6	0	1	215	1	215	3.85e-156	431

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene99819.t1	AT1G51100	69.780	182	47	4	37	215	35	211	1.20e-81	242

Find 38 sgRNAs with CRISPR-Local

Find 50 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCCAACCTATTTCAAAATT+TGG	0.094353	2.3:+14671361	None:intergenic
TTCTCTATAGGAAATGTTTC+TGG	0.167892	2.3:+14671448	None:intergenic
TCAGAAGATGTGGAATTTAA+TGG	0.265594	2.3:+14671517	None:intergenic
CTGTTCATTGTAGTGTTTGT+AGG	0.309624	2.3:+14671472	None:intergenic
GAGGTTGATGGAAATGGATT+TGG	0.355148	2.3:-14671122	MS.gene99819:CDS
GAACTTATGAAGAAGGAATA+TGG	0.383069	2.3:-14671268	MS.gene99819:CDS
ATTGTAGTGTTTGTAGGGTC+TGG	0.399199	2.3:+14671478	None:intergenic
TGTTCATTGTAGTGTTTGTA+GGG	0.442377	2.3:+14671473	None:intergenic
GTTGGAGGAACTTATGAAGA+AGG	0.476939	2.3:-14671275	MS.gene99819:CDS
TGGCTCGGCATTTGCAAGGT+CGG	0.477066	2.3:+14671384	None:intergenic
CAACCTATTTCAAAATTTGG+TGG	0.478009	2.3:+14671364	None:intergenic
AGGAAAAGTTGAGGAGAGAA+TGG	0.490855	2.3:-14671167	MS.gene99819:CDS
ATGAAGAGTTAAAATTCAAA+AGG	0.492536	2.3:+14671006	None:intergenic
GAGAGATGAAGGAAAAGTTG+AGG	0.497620	2.3:-14671176	MS.gene99819:CDS
ACAGAACTGTTGGCAAAAGT+TGG	0.501386	2.3:-14671241	MS.gene99819:CDS
TATTTCAAAATTTGGTGGCT+CGG	0.505623	2.3:+14671369	None:intergenic
TGAAAGGTGTGAAGATGTGT+TGG	0.506225	2.3:+14671588	None:intergenic
TATGGTGAAAGCTTCTGTTA+AGG	0.539994	2.3:-14671098	MS.gene99819:CDS
AGGAAGATACTTTGAATGAG+AGG	0.541636	2.3:-14671078	MS.gene99819:CDS
TTGTGTAGATGATGAGGTGT+AGG	0.543834	2.3:+14671622	None:intergenic
ATATGGTTCAACAGAACTGT+TGG	0.553725	2.3:-14671251	MS.gene99819:CDS
GATGGAAATGGATTTGGCTA+TGG	0.555092	2.3:-14671116	MS.gene99819:CDS
AAATTCTTGCTCAGAAGATG+TGG	0.558444	2.3:+14671507	None:intergenic
CAGAGATAATCAGACAAAGA+AGG	0.559049	2.3:-14671414	MS.gene99819:CDS
AGTGTTTGTAGGGTCTGGTG+TGG	0.564863	2.3:+14671483	None:intergenic
TCAGCTACCACATACCCTAC+TGG	0.567101	2.3:+14671310	None:intergenic
TGAGAAGCCAGTAGGGTATG+TGG	0.573091	2.3:-14671317	MS.gene99819:CDS
TTGGTGGCTCGGCATTTGCA+AGG	0.573166	2.3:+14671380	None:intergenic
ATCAAGCTAAGGCTAGGTGC+AGG	0.575411	2.3:-14671051	MS.gene99819:CDS
ATTAACCTTGAGAAGCCAGT+AGG	0.578990	2.3:-14671325	MS.gene99819:CDS
GTGTTTGTAGGGTCTGGTGT+GGG	0.588160	2.3:+14671484	None:intergenic
TGAGAGGCTTGATCAAGCTA+AGG	0.591500	2.3:-14671062	MS.gene99819:CDS
TGTGAGGAATGTTGAAGCCA+TGG	0.619146	2.3:+14671648	None:intergenic
GGCTTGATCAAGCTAAGGCT+AGG	0.619994	2.3:-14671057	MS.gene99819:CDS
TTAACCTTGAGAAGCCAGTA+GGG	0.629422	2.3:-14671324	MS.gene99819:CDS
CATACCCTACTGGCTTCTCA+AGG	0.644603	2.3:+14671320	None:intergenic
AAGAGATTGTGTAGATGATG+AGG	0.673918	2.3:+14671616	None:intergenic
GATGAGGTGTAGGATATGTG+AGG	0.690908	2.3:+14671632	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTATGAAAAAGTGCTTTT+TGG	+	chr2.3:14671121-14671140	None:intergenic	20.0%
!	TTCCAACCTATTTCAAAATT+TGG	+	chr2.3:14671309-14671328	None:intergenic	25.0%
!!!	ATTTTGAAATAGGTTGGAAA+AGG	-	chr2.3:14671310-14671329	MS.gene99819:CDS	25.0%
	CAACCTATTTCAAAATTTGG+TGG	+	chr2.3:14671306-14671325	None:intergenic	30.0%
	GAACTTATGAAGAAGGAATA+TGG	-	chr2.3:14671399-14671418	MS.gene99819:CDS	30.0%
	TCAGAAGATGTGGAATTTAA+TGG	+	chr2.3:14671153-14671172	None:intergenic	30.0%
	TGTTCATTGTAGTGTTTGTA+GGG	+	chr2.3:14671197-14671216	None:intergenic	30.0%
	TTCTCTATAGGAAATGTTTC+TGG	+	chr2.3:14671222-14671241	None:intergenic	30.0%
!	GATCTTCTTCTTTTCTCTAT+AGG	+	chr2.3:14671234-14671253	None:intergenic	30.0%
!	TATTTCAAAATTTGGTGGCT+CGG	+	chr2.3:14671301-14671320	None:intergenic	30.0%
!!!	CACCAAATTTTGAAATAGGT+TGG	-	chr2.3:14671304-14671323	MS.gene99819:CDS	30.0%
!!!	TTGAACTCTTTAGAGTTTTG+AGG	-	chr2.3:14671526-14671545	MS.gene99819:CDS	30.0%
!!!	TTTTGTTGTTGTGAGTTGAA+AGG	+	chr2.3:14671098-14671117	None:intergenic	30.0%
	AAATTCTTGCTCAGAAGATG+TGG	+	chr2.3:14671163-14671182	None:intergenic	35.0%
	AAGAGATTGTGTAGATGATG+AGG	+	chr2.3:14671054-14671073	None:intergenic	35.0%
	AGGAAGATACTTTGAATGAG+AGG	-	chr2.3:14671589-14671608	MS.gene99819:CDS	35.0%
	ATATGGTTCAACAGAACTGT+TGG	-	chr2.3:14671416-14671435	MS.gene99819:CDS	35.0%
	CAGAGATAATCAGACAAAGA+AGG	-	chr2.3:14671253-14671272	MS.gene99819:CDS	35.0%
	CTGTTCATTGTAGTGTTTGT+AGG	+	chr2.3:14671198-14671217	None:intergenic	35.0%
	TATGGTGAAAGCTTCTGTTA+AGG	-	chr2.3:14671569-14671588	MS.gene99819:CDS	35.0%
!!	GCAGAAATTTTGAGAGATGA+AGG	-	chr2.3:14671480-14671499	MS.gene99819:CDS	35.0%
!!!	AGCTGATTTTTTGGAGAAGT+TGG	-	chr2.3:14671374-14671393	MS.gene99819:CDS	35.0%
!!!	AGTTTTGAGGTTGATGGAAA+TGG	-	chr2.3:14671539-14671558	MS.gene99819:CDS	35.0%
!!!	CTTTAGAGTTTTGAGGTTGA+TGG	-	chr2.3:14671533-14671552	MS.gene99819:CDS	35.0%
!!!	GAGCCACCAAATTTTGAAAT+AGG	-	chr2.3:14671300-14671319	MS.gene99819:CDS	35.0%
!!!	GTATGTGGTAGCTGATTTTT+TGG	-	chr2.3:14671365-14671384	MS.gene99819:CDS	35.0%
!!!	TGATTTTTTGGAGAAGTTGG+AGG	-	chr2.3:14671377-14671396	MS.gene99819:CDS	35.0%
	ACAGAACTGTTGGCAAAAGT+TGG	-	chr2.3:14671426-14671445	MS.gene99819:CDS	40.0%
	AGGAAAAGTTGAGGAGAGAA+TGG	-	chr2.3:14671500-14671519	MS.gene99819:CDS	40.0%
	ATTAACCTTGAGAAGCCAGT+AGG	-	chr2.3:14671342-14671361	MS.gene99819:CDS	40.0%
	ATTGTAGTGTTTGTAGGGTC+TGG	+	chr2.3:14671192-14671211	None:intergenic	40.0%
	GAGAGATGAAGGAAAAGTTG+AGG	-	chr2.3:14671491-14671510	MS.gene99819:CDS	40.0%
	GTTGGAGGAACTTATGAAGA+AGG	-	chr2.3:14671392-14671411	MS.gene99819:CDS	40.0%
	TTAACCTTGAGAAGCCAGTA+GGG	-	chr2.3:14671343-14671362	MS.gene99819:CDS	40.0%
	TTGTGTAGATGATGAGGTGT+AGG	+	chr2.3:14671048-14671067	None:intergenic	40.0%
!	GATGGAAATGGATTTGGCTA+TGG	-	chr2.3:14671551-14671570	MS.gene99819:CDS	40.0%
!	TGAAAGGTGTGAAGATGTGT+TGG	+	chr2.3:14671082-14671101	None:intergenic	40.0%
!!	GAGGTTGATGGAAATGGATT+TGG	-	chr2.3:14671545-14671564	MS.gene99819:CDS	40.0%
	GATGAGGTGTAGGATATGTG+AGG	+	chr2.3:14671038-14671057	None:intergenic	45.0%
	TGAGAGGCTTGATCAAGCTA+AGG	-	chr2.3:14671605-14671624	MS.gene99819:CDS	45.0%
!!	GCATTTGCAAGGTCGGTTTT+CGG	+	chr2.3:14671279-14671298	None:intergenic	45.0%
	AGTGTTTGTAGGGTCTGGTG+TGG	+	chr2.3:14671187-14671206	None:intergenic	50.0%
	ATCAAGCTAAGGCTAGGTGC+AGG	-	chr2.3:14671616-14671635	MS.gene99819:CDS	50.0%
	GGCTTGATCAAGCTAAGGCT+AGG	-	chr2.3:14671610-14671629	MS.gene99819:CDS	50.0%
	GTGTTTGTAGGGTCTGGTGT+GGG	+	chr2.3:14671186-14671205	None:intergenic	50.0%
	TCAGCTACCACATACCCTAC+TGG	+	chr2.3:14671360-14671379	None:intergenic	50.0%
	TGAGAAGCCAGTAGGGTATG+TGG	-	chr2.3:14671350-14671369	MS.gene99819:CDS	50.0%
!!	CATACCCTACTGGCTTCTCA+AGG	+	chr2.3:14671350-14671369	None:intergenic	50.0%
!	TGGCTCGGCATTTGCAAGGT+CGG	+	chr2.3:14671286-14671305	None:intergenic	55.0%
!	TTGGTGGCTCGGCATTTGCA+AGG	+	chr2.3:14671290-14671309	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.3	gene	14671021	14671668	14671021	ID=MS.gene99819
chr2.3	mRNA	14671021	14671668	14671021	ID=MS.gene99819.t1;Parent=MS.gene99819
chr2.3	exon	14671021	14671668	14671021	ID=MS.gene99819.t1.exon1;Parent=MS.gene99819.t1
chr2.3	CDS	14671021	14671668	14671021	ID=cds.MS.gene99819.t1;Parent=MS.gene99819.t1

Gene Sequence

>MS.gene99819

ATGGCTTCAACATTCCTCACATATCCTACACCTCATCATCTACACAATCTCTTTCAAACCAACACATCTTCACACCTTTCAACTCACAACAACAAAACCAAAAAGCACTTTTTCATAAAATGCACTACTCCATTAAATTCCACATCTTCTGAGCAAGAATTTCCCACACCAGACCCTACAAACACTACAATGAACAGTCCAGAAACATTTCCTATAGAGAAAAGAAGAAGATCAGAGATAATCAGACAAAGAAGGCCGAAAACCGACCTTGCAAATGCCGAGCCACCAAATTTTGAAATAGGTTGGAAAAGGACAAAAGAGATTAACCTTGAGAAGCCAGTAGGGTATGTGGTAGCTGATTTTTTGGAGAAGTTGGAGGAACTTATGAAGAAGGAATATGGTTCAACAGAACTGTTGGCAAAAGTTGGTGAAATTGTTGCTGAAAGAGCAAGAGAAGAAGCAGAAATTTTGAGAGATGAAGGAAAAGTTGAGGAGAGAATGGTTGTTGAACTCTTTAGAGTTTTGAGGTTGATGGAAATGGATTTGGCTATGGTGAAAGCTTCTGTTAAGGAAGATACTTTGAATGAGAGGCTTGATCAAGCTAAGGCTAGGTGCAGGCAAGCTATACTTGTTTGTTATTCCTTTTGA

Protein sequence

>MS.gene99819.t1

MASTFLTYPTPHHLHNLFQTNTSSHLSTHNNKTKKHFFIKCTTPLNSTSSEQEFPTPDPTNTTMNSPETFPIEKRRRSEIIRQRRPKTDLANAEPPNFEIGWKRTKEINLEKPVGYVVADFLEKLEELMKKEYGSTELLAKVGEIVAERAREEAEILRDEGKVEERMVVELFRVLRLMEMDLAMVKASVKEDTLNERLDQAKARCRQAILVCYSF