Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58501.t1 | XP_013443853.1 | 97.6 | 378 | 8 | 1 | 1 | 377 | 103 | 480 | 1.60E-217 | 765 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58501.t1 | A0A072TM35 | 97.6 | 378 | 8 | 1 | 1 | 377 | 103 | 480 | 1.2e-217 | 765.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene58501 | 0.80259 | 5.22E-49 | -1.69E-46 |
| MS.gene049150 | MS.gene58501 | 0.819065 | 1.41E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene58501 | 0.82175 | 3.42E-53 | -1.69E-46 |
| MS.gene049346 | MS.gene58501 | 0.818612 | 1.79E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene58501 | 0.888314 | 6.59E-73 | -1.69E-46 |
| MS.gene049356 | MS.gene58501 | 0.848206 | 7.10E-60 | -1.69E-46 |
| MS.gene049369 | MS.gene58501 | 0.800931 | 1.14E-48 | -1.69E-46 |
| MS.gene049427 | MS.gene58501 | 0.825735 | 3.99E-54 | -1.69E-46 |
| MS.gene049491 | MS.gene58501 | 0.82031 | 7.34E-53 | -1.69E-46 |
| MS.gene049661 | MS.gene58501 | 0.857735 | 1.33E-62 | -1.69E-46 |
| MS.gene049662 | MS.gene58501 | 0.856182 | 3.82E-62 | -1.69E-46 |
| MS.gene049681 | MS.gene58501 | 0.801699 | 7.96E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene58501 | 0.872978 | 2.10E-67 | -1.69E-46 |
| MS.gene049910 | MS.gene58501 | 0.816212 | 6.21E-52 | -1.69E-46 |
| MS.gene050076 | MS.gene58501 | 0.838446 | 2.86E-57 | -1.69E-46 |
| MS.gene050099 | MS.gene58501 | 0.82365 | 1.24E-53 | -1.69E-46 |
| MS.gene050128 | MS.gene58501 | 0.832249 | 1.05E-55 | -1.69E-46 |
| MS.gene050231 | MS.gene58501 | 0.801481 | 8.82E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene58501 | 0.90817 | 2.29E-81 | -1.69E-46 |
| MS.gene050397 | MS.gene58501 | 0.845136 | 4.90E-59 | -1.69E-46 |
| MS.gene050404 | MS.gene58501 | 0.801631 | 8.22E-49 | -1.69E-46 |
| MS.gene050406 | MS.gene58501 | 0.823046 | 1.71E-53 | -1.69E-46 |
| MS.gene050432 | MS.gene58501 | 0.863488 | 2.40E-64 | -1.69E-46 |
| MS.gene050464 | MS.gene58501 | 0.821034 | 5.00E-53 | -1.69E-46 |
| MS.gene050529 | MS.gene58501 | 0.854274 | 1.37E-61 | -1.69E-46 |
| MS.gene050558 | MS.gene58501 | 0.825932 | 3.58E-54 | -1.69E-46 |
| MS.gene050642 | MS.gene58501 | 0.800247 | 1.58E-48 | -1.69E-46 |
| MS.gene050650 | MS.gene58501 | 0.803756 | 3.00E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene58501 | 0.882283 | 1.19E-70 | -1.69E-46 |
| MS.gene050767 | MS.gene58501 | 0.807285 | 5.45E-50 | -1.69E-46 |
| MS.gene050770 | MS.gene58501 | 0.811129 | 8.17E-51 | -1.69E-46 |
| MS.gene050783 | MS.gene58501 | 0.817301 | 3.54E-52 | -1.69E-46 |
| MS.gene050812 | MS.gene58501 | 0.852848 | 3.53E-61 | -1.69E-46 |
| MS.gene05101 | MS.gene58501 | 0.880965 | 3.55E-70 | -1.69E-46 |
| MS.gene05105 | MS.gene58501 | 0.853931 | 1.72E-61 | -1.69E-46 |
| MS.gene05119 | MS.gene58501 | -0.803065 | 4.17E-49 | -1.69E-46 |
| MS.gene051255 | MS.gene58501 | 0.824177 | 9.30E-54 | -1.69E-46 |
| MS.gene051360 | MS.gene58501 | 0.80577 | 1.14E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene58501 | 0.817963 | 2.51E-52 | -1.69E-46 |
| MS.gene051471 | MS.gene58501 | 0.861472 | 1.00E-63 | -1.69E-46 |
| MS.gene051525 | MS.gene58501 | 0.825945 | 3.55E-54 | -1.69E-46 |
| MS.gene051582 | MS.gene58501 | 0.862054 | 6.65E-64 | -1.69E-46 |
| MS.gene051663 | MS.gene58501 | 0.836279 | 1.03E-56 | -1.69E-46 |
| MS.gene051860 | MS.gene58501 | 0.845034 | 5.22E-59 | -1.69E-46 |
| MS.gene051877 | MS.gene58501 | 0.817967 | 2.51E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene58501 | 0.80713 | 5.87E-50 | -1.69E-46 |
| MS.gene052011 | MS.gene58501 | -0.840418 | 8.80E-58 | -1.69E-46 |
| MS.gene052077 | MS.gene58501 | 0.821955 | 3.07E-53 | -1.69E-46 |
| MS.gene052078 | MS.gene58501 | 0.868895 | 4.65E-66 | -1.69E-46 |
| MS.gene052178 | MS.gene58501 | 0.823027 | 1.73E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene58501 | 0.906392 | 1.56E-80 | -1.69E-46 |
| MS.gene052207 | MS.gene58501 | 0.829776 | 4.26E-55 | -1.69E-46 |
| MS.gene052253 | MS.gene58501 | 0.901923 | 1.64E-78 | -1.69E-46 |
| MS.gene052255 | MS.gene58501 | 0.822572 | 2.20E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene58501 | 0.873004 | 2.06E-67 | -1.69E-46 |
| MS.gene052322 | MS.gene58501 | 0.845316 | 4.38E-59 | -1.69E-46 |
| MS.gene052326 | MS.gene58501 | 0.857486 | 1.58E-62 | -1.69E-46 |
| MS.gene052340 | MS.gene58501 | 0.877074 | 8.41E-69 | -1.69E-46 |
| MS.gene052421 | MS.gene58501 | 0.83925 | 1.77E-57 | -1.69E-46 |
| MS.gene052481 | MS.gene58501 | 0.823478 | 1.36E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene58501 | 0.874989 | 4.39E-68 | -1.69E-46 |
| MS.gene052982 | MS.gene58501 | 0.825264 | 5.15E-54 | -1.69E-46 |
| MS.gene05316 | MS.gene58501 | 0.810368 | 1.19E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene58501 | 0.869498 | 2.96E-66 | -1.69E-46 |
| MS.gene053322 | MS.gene58501 | 0.808473 | 3.04E-50 | -1.69E-46 |
| MS.gene053557 | MS.gene58501 | 0.847186 | 1.36E-59 | -1.69E-46 |
| MS.gene053758 | MS.gene58501 | 0.810885 | 9.23E-51 | -1.69E-46 |
| MS.gene053813 | MS.gene58501 | 0.802316 | 5.94E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene58501 | 0.895507 | 8.97E-76 | -1.69E-46 |
| MS.gene053907 | MS.gene58501 | 0.814778 | 1.30E-51 | -1.69E-46 |
| MS.gene053928 | MS.gene58501 | 0.865125 | 7.41E-65 | -1.69E-46 |
| MS.gene054010 | MS.gene58501 | 0.816186 | 6.30E-52 | -1.69E-46 |
| MS.gene054011 | MS.gene58501 | 0.82989 | 4.00E-55 | -1.69E-46 |
| MS.gene054012 | MS.gene58501 | 0.819714 | 1.00E-52 | -1.69E-46 |
| MS.gene054013 | MS.gene58501 | 0.811745 | 6.00E-51 | -1.69E-46 |
| MS.gene054123 | MS.gene58501 | 0.894302 | 2.80E-75 | -1.69E-46 |
| MS.gene054183 | MS.gene58501 | 0.837801 | 4.19E-57 | -1.69E-46 |
| MS.gene054349 | MS.gene58501 | 0.82764 | 1.40E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene58501 | 0.816084 | 6.63E-52 | -1.69E-46 |
| MS.gene054473 | MS.gene58501 | 0.826307 | 2.91E-54 | -1.69E-46 |
| MS.gene054556 | MS.gene58501 | 0.831758 | 1.39E-55 | -1.69E-46 |
| MS.gene05455 | MS.gene58501 | 0.842158 | 3.07E-58 | -1.69E-46 |
| MS.gene054719 | MS.gene58501 | 0.805956 | 1.04E-49 | -1.69E-46 |
| MS.gene054802 | MS.gene58501 | 0.811702 | 6.14E-51 | -1.69E-46 |
| MS.gene054803 | MS.gene58501 | 0.811353 | 7.31E-51 | -1.69E-46 |
| MS.gene054804 | MS.gene58501 | 0.813942 | 1.98E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene58501 | 0.842206 | 2.98E-58 | -1.69E-46 |
| MS.gene05505 | MS.gene58501 | 0.813265 | 2.79E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene58501 | 0.879226 | 1.48E-69 | -1.69E-46 |
| MS.gene055277 | MS.gene58501 | 0.895051 | 1.38E-75 | -1.69E-46 |
| MS.gene055369 | MS.gene58501 | 0.819131 | 1.36E-52 | -1.69E-46 |
| MS.gene055390 | MS.gene58501 | 0.878809 | 2.08E-69 | -1.69E-46 |
| MS.gene055412 | MS.gene58501 | 0.879277 | 1.42E-69 | -1.69E-46 |
| MS.gene055422 | MS.gene58501 | 0.897324 | 1.57E-76 | -1.69E-46 |
| MS.gene055428 | MS.gene58501 | 0.878649 | 2.37E-69 | -1.69E-46 |
| MS.gene05553 | MS.gene58501 | 0.850516 | 1.61E-60 | -1.69E-46 |
| MS.gene055564 | MS.gene58501 | 0.817787 | 2.75E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene58501 | 0.863951 | 1.72E-64 | -1.69E-46 |
| MS.gene055712 | MS.gene58501 | 0.805921 | 1.06E-49 | -1.69E-46 |
| MS.gene05594 | MS.gene58501 | 0.818087 | 2.35E-52 | -1.69E-46 |
| MS.gene05602 | MS.gene58501 | 0.826824 | 2.19E-54 | -1.69E-46 |
| MS.gene056191 | MS.gene58501 | 0.845209 | 4.68E-59 | -1.69E-46 |
| MS.gene056407 | MS.gene58501 | 0.8848 | 1.41E-71 | -1.69E-46 |
| MS.gene056410 | MS.gene58501 | 0.815301 | 9.91E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene58501 | 0.800429 | 1.45E-48 | -1.69E-46 |
| MS.gene056609 | MS.gene58501 | 0.846371 | 2.27E-59 | -1.69E-46 |
| MS.gene056612 | MS.gene58501 | 0.859896 | 3.01E-63 | -1.69E-46 |
| MS.gene056659 | MS.gene58501 | 0.887637 | 1.20E-72 | -1.69E-46 |
| MS.gene056723 | MS.gene58501 | 0.861602 | 9.14E-64 | -1.69E-46 |
| MS.gene056796 | MS.gene58501 | 0.842733 | 2.16E-58 | -1.69E-46 |
| MS.gene056902 | MS.gene58501 | 0.829956 | 3.85E-55 | -1.69E-46 |
| MS.gene056979 | MS.gene58501 | 0.80322 | 3.87E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene58501 | 0.838558 | 2.68E-57 | -1.69E-46 |
| MS.gene05702 | MS.gene58501 | 0.866218 | 3.35E-65 | -1.69E-46 |
| MS.gene057121 | MS.gene58501 | 0.881059 | 3.29E-70 | -1.69E-46 |
| MS.gene057124 | MS.gene58501 | 0.879163 | 1.56E-69 | -1.69E-46 |
| MS.gene057146 | MS.gene58501 | 0.800665 | 1.30E-48 | -1.69E-46 |
| MS.gene057207 | MS.gene58501 | 0.844333 | 8.07E-59 | -1.69E-46 |
| MS.gene057245 | MS.gene58501 | 0.847307 | 1.26E-59 | -1.69E-46 |
| MS.gene057295 | MS.gene58501 | 0.805499 | 1.30E-49 | -1.69E-46 |
| MS.gene05733 | MS.gene58501 | 0.818077 | 2.37E-52 | -1.69E-46 |
| MS.gene057396 | MS.gene58501 | 0.849719 | 2.70E-60 | -1.69E-46 |
| MS.gene057439 | MS.gene58501 | 0.825162 | 5.45E-54 | -1.69E-46 |
| MS.gene057448 | MS.gene58501 | 0.852882 | 3.45E-61 | -1.69E-46 |
| MS.gene057449 | MS.gene58501 | 0.835297 | 1.82E-56 | -1.69E-46 |
| MS.gene057450 | MS.gene58501 | 0.848666 | 5.30E-60 | -1.69E-46 |
| MS.gene057469 | MS.gene58501 | 0.828486 | 8.75E-55 | -1.69E-46 |
| MS.gene057749 | MS.gene58501 | 0.858757 | 6.61E-63 | -1.69E-46 |
| MS.gene057823 | MS.gene58501 | 0.856627 | 2.83E-62 | -1.69E-46 |
| MS.gene057825 | MS.gene58501 | 0.816339 | 5.82E-52 | -1.69E-46 |
| MS.gene057845 | MS.gene58501 | 0.802677 | 5.01E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene58501 | 0.907001 | 8.12E-81 | -1.69E-46 |
| MS.gene058007 | MS.gene58501 | 0.817496 | 3.20E-52 | -1.69E-46 |
| MS.gene058082 | MS.gene58501 | 0.842069 | 3.24E-58 | -1.69E-46 |
| MS.gene05811 | MS.gene58501 | 0.882585 | 9.21E-71 | -1.69E-46 |
| MS.gene058142 | MS.gene58501 | 0.871992 | 4.48E-67 | -1.69E-46 |
| MS.gene058233 | MS.gene58501 | 0.856402 | 3.30E-62 | -1.69E-46 |
| MS.gene058276 | MS.gene58501 | 0.858889 | 6.04E-63 | -1.69E-46 |
| MS.gene058293 | MS.gene58501 | 0.877891 | 4.37E-69 | -1.69E-46 |
| MS.gene058365 | MS.gene58501 | 0.889115 | 3.23E-73 | -1.69E-46 |
| MS.gene05842 | MS.gene58501 | 0.801681 | 8.03E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene58501 | 0.896324 | 4.11E-76 | -1.69E-46 |
| MS.gene058700 | MS.gene58501 | 0.812172 | 4.85E-51 | -1.69E-46 |
| MS.gene058710 | MS.gene58501 | 0.84739 | 1.19E-59 | -1.69E-46 |
| MS.gene058749 | MS.gene58501 | 0.826596 | 2.49E-54 | -1.69E-46 |
| MS.gene058787 | MS.gene58501 | 0.847879 | 8.74E-60 | -1.69E-46 |
| MS.gene058845 | MS.gene58501 | 0.821097 | 4.84E-53 | -1.69E-46 |
| MS.gene05886 | MS.gene58501 | 0.870985 | 9.65E-67 | -1.69E-46 |
| MS.gene058928 | MS.gene58501 | 0.85003 | 2.21E-60 | -1.69E-46 |
| MS.gene058948 | MS.gene58501 | 0.840635 | 7.72E-58 | -1.69E-46 |
| MS.gene058949 | MS.gene58501 | 0.850045 | 2.19E-60 | -1.69E-46 |
| MS.gene058993 | MS.gene58501 | 0.826903 | 2.10E-54 | -1.69E-46 |
| MS.gene059011 | MS.gene58501 | 0.808214 | 3.46E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene58501 | 0.875621 | 2.67E-68 | -1.69E-46 |
| MS.gene059141 | MS.gene58501 | 0.821343 | 4.25E-53 | -1.69E-46 |
| MS.gene059285 | MS.gene58501 | 0.840276 | 9.59E-58 | -1.69E-46 |
| MS.gene059342 | MS.gene58501 | 0.810882 | 9.24E-51 | -1.69E-46 |
| MS.gene059366 | MS.gene58501 | 0.82983 | 4.13E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene58501 | 0.875323 | 3.37E-68 | -1.69E-46 |
| MS.gene059462 | MS.gene58501 | 0.804232 | 2.38E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene58501 | 0.8569 | 2.35E-62 | -1.69E-46 |
| MS.gene059597 | MS.gene58501 | 0.869009 | 4.27E-66 | -1.69E-46 |
| MS.gene05959 | MS.gene58501 | 0.843693 | 1.20E-58 | -1.69E-46 |
| MS.gene059676 | MS.gene58501 | 0.8675 | 1.31E-65 | -1.69E-46 |
| MS.gene059688 | MS.gene58501 | 0.898647 | 4.32E-77 | -1.69E-46 |
| MS.gene059692 | MS.gene58501 | 0.905039 | 6.54E-80 | -1.69E-46 |
| MS.gene059695 | MS.gene58501 | 0.908691 | 1.30E-81 | -1.69E-46 |
| MS.gene059708 | MS.gene58501 | 0.82897 | 6.68E-55 | -1.69E-46 |
| MS.gene059711 | MS.gene58501 | 0.800094 | 1.69E-48 | -1.69E-46 |
| MS.gene05984 | MS.gene58501 | 0.875745 | 2.42E-68 | -1.69E-46 |
| MS.gene059894 | MS.gene58501 | 0.862165 | 6.15E-64 | -1.69E-46 |
| MS.gene059899 | MS.gene58501 | 0.805454 | 1.32E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene58501 | 0.822263 | 2.60E-53 | -1.69E-46 |
| MS.gene059974 | MS.gene58501 | 0.808941 | 2.42E-50 | -1.69E-46 |
| MS.gene060247 | MS.gene58501 | 0.811154 | 8.07E-51 | -1.69E-46 |
| MS.gene06037 | MS.gene58501 | 0.866302 | 3.15E-65 | -1.69E-46 |
| MS.gene060403 | MS.gene58501 | 0.828684 | 7.84E-55 | -1.69E-46 |
| MS.gene060407 | MS.gene58501 | 0.849117 | 3.97E-60 | -1.69E-46 |
| MS.gene060804 | MS.gene58501 | 0.812155 | 4.89E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene58501 | 0.818387 | 2.01E-52 | -1.69E-46 |
| MS.gene06090 | MS.gene58501 | 0.836734 | 7.87E-57 | -1.69E-46 |
| MS.gene060971 | MS.gene58501 | 0.809008 | 2.34E-50 | -1.69E-46 |
| MS.gene060986 | MS.gene58501 | 0.802211 | 6.25E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene58501 | 0.889234 | 2.91E-73 | -1.69E-46 |
| MS.gene061051 | MS.gene58501 | -0.860153 | 2.52E-63 | -1.69E-46 |
| MS.gene061154 | MS.gene58501 | 0.847696 | 9.82E-60 | -1.69E-46 |
| MS.gene061159 | MS.gene58501 | 0.813771 | 2.16E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene58501 | 0.808953 | 2.40E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58501.t1 | MTR_8g007155 | 97.619 | 378 | 8 | 1 | 1 | 377 | 103 | 480 | 0.0 | 771 |
| MS.gene58501.t1 | MTR_8g007155 | 95.844 | 385 | 8 | 2 | 1 | 377 | 103 | 487 | 0.0 | 764 |
| MS.gene58501.t1 | MTR_8g007155 | 97.305 | 334 | 8 | 1 | 45 | 377 | 1 | 334 | 0.0 | 675 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58501.t1 | AT2G44760 | 66.142 | 381 | 107 | 3 | 1 | 377 | 131 | 493 | 0.0 | 518 |
Find 104 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGCAGTCTCAGTGGAATT+TGG | 0.196435 | 8.4:+79606861 | MS.gene58501:CDS |
| AAATCCAAAGGAAGGTTAAT+TGG | 0.216672 | 8.4:+79607026 | MS.gene58501:CDS |
| ATCAGCGCTACTCCGGTCTA+TGG | 0.306706 | 8.4:+79608788 | MS.gene58501:CDS |
| GCGACGGCACTGCCTCTATA+CGG | 0.317264 | 8.4:-79606982 | None:intergenic |
| CATTTATGAATTCTATAGTA+TGG | 0.319358 | 8.4:-79608097 | None:intergenic |
| GTACATTTAAAACAGTGATA+TGG | 0.322051 | 8.4:+79608688 | MS.gene58501:intron |
| TGCAGGATGGATCTTATTCT+AGG | 0.335281 | 8.4:+79607486 | MS.gene58501:intron |
| CATACTATAGAATTCATAAA+TGG | 0.344839 | 8.4:+79608098 | MS.gene58501:CDS |
| TTCTCCAATCACTGCTGAAA+TGG | 0.356302 | 8.4:+79606904 | MS.gene58501:CDS |
| GCACCCACTGAAATATTCAT+AGG | 0.369182 | 8.4:-79607512 | None:intergenic |
| TATGACCATTCTATGGCTTC+CGG | 0.376585 | 8.4:+79608943 | MS.gene58501:CDS |
| TCACCCAATTAACCTTCCTT+TGG | 0.377747 | 8.4:-79607030 | None:intergenic |
| CTTGTGATGGAAAGAGATTA+TGG | 0.389804 | 8.4:+79609049 | MS.gene58501:CDS |
| GGCTCCATTTCAGCAGTGAT+TGG | 0.397415 | 8.4:-79606908 | None:intergenic |
| TTCTTGACACTTATTTCCAT+TGG | 0.410247 | 8.4:-79606929 | None:intergenic |
| TGTTACTGGTGCTATGTTGA+TGG | 0.411163 | 8.4:+79605296 | None:intergenic |
| ATGACCATTCTATGGCTTCC+GGG | 0.414312 | 8.4:+79608944 | MS.gene58501:CDS |
| TGCAGGATATGACCATTCTA+TGG | 0.418224 | 8.4:+79608936 | MS.gene58501:CDS |
| GGCATAGCTAAGAATGGTTC+CGG | 0.424612 | 8.4:+79607097 | MS.gene58501:CDS |
| CCAAAGTAGTTGGCACTATC+CGG | 0.442331 | 8.4:-79608893 | None:intergenic |
| ATGTTATGTTGATATCAATA+AGG | 0.445468 | 8.4:+79608976 | MS.gene58501:CDS |
| AATCCAAAGGAAGGTTAATT+GGG | 0.448257 | 8.4:+79607027 | MS.gene58501:CDS |
| TGGTTAAAGGCTGCCACAAA+AGG | 0.448879 | 8.4:+79608063 | MS.gene58501:CDS |
| CATGACCCTGTCAACTCTGA+TGG | 0.454717 | 8.4:-79608752 | None:intergenic |
| CCCTGTCAACTCTGATGGAT+TGG | 0.456022 | 8.4:-79608747 | None:intergenic |
| AGAGGCAGTGCCGTCGCATT+CGG | 0.457112 | 8.4:+79606988 | MS.gene58501:CDS |
| ACTTGTTCAAACTTGAAAGT+TGG | 0.459938 | 8.4:-79607563 | None:intergenic |
| TGTTGCGGCATTTCACCATA+AGG | 0.462205 | 8.4:-79607061 | None:intergenic |
| GATGTCATGGGCTGTGAACC+TGG | 0.464218 | 8.4:+79607232 | MS.gene58501:CDS |
| CCGGATAGTGCCAACTACTT+TGG | 0.466476 | 8.4:+79608893 | MS.gene58501:CDS |
| TCAGCGCTACTCCGGTCTAT+GGG | 0.470374 | 8.4:+79608789 | MS.gene58501:CDS |
| GGAGGAGAGGCTTGACATGC+AGG | 0.472665 | 8.4:+79608919 | MS.gene58501:CDS |
| CTATACTCTTTCCCGTATAG+AGG | 0.475509 | 8.4:+79606970 | MS.gene58501:CDS |
| CACTGCTGAAATGGAGCCAA+TGG | 0.477776 | 8.4:+79606913 | MS.gene58501:CDS |
| TGCTGTGTATGAAGAGGAAT+GGG | 0.483464 | 8.4:+79608148 | MS.gene58501:CDS |
| TGGGTGACTTTGAATCCTTA+TGG | 0.484540 | 8.4:+79607046 | MS.gene58501:CDS |
| AAGTCAAAGGATTCAAATGT+AGG | 0.488900 | 8.4:-79607184 | None:intergenic |
| CTCCTCCTCGCCAAAGTAGT+TGG | 0.490934 | 8.4:-79608903 | None:intergenic |
| GCAGGATGGATCTTATTCTA+GGG | 0.494716 | 8.4:+79607487 | MS.gene58501:intron |
| GGAAATCAGAGATGAAGAGA+AGG | 0.496039 | 8.4:+79609101 | MS.gene58501:CDS |
| TTGTGATGGAAAGAGATTAT+GGG | 0.505191 | 8.4:+79609050 | MS.gene58501:CDS |
| GAAAGAGATTATGGGTTGGA+TGG | 0.505505 | 8.4:+79609058 | MS.gene58501:CDS |
| ACCAATCCATCAGAGTTGAC+AGG | 0.511162 | 8.4:+79608746 | MS.gene58501:CDS |
| GATCTTAAAGCTCCTATAGC+CGG | 0.517766 | 8.4:+79607121 | MS.gene58501:CDS |
| TTCTATGCATCGGAGTTGGC+TGG | 0.518081 | 8.4:+79609005 | MS.gene58501:CDS |
| CGACGGCACTGCCTCTATAC+GGG | 0.521684 | 8.4:-79606981 | None:intergenic |
| CTAGCAAATGTGTTCCATGC+TGG | 0.522985 | 8.4:-79606842 | None:intergenic |
| CCATTGTCTTCAACTTGTTG+CGG | 0.527673 | 8.4:-79607076 | None:intergenic |
| ACATAACATGTCACACCTCC+CGG | 0.529213 | 8.4:-79608962 | None:intergenic |
| ACTTCAAAGTAAACAAGGCC+AGG | 0.530340 | 8.4:-79607250 | None:intergenic |
| ATCTTAAAGCTCCTATAGCC+GGG | 0.530397 | 8.4:+79607122 | MS.gene58501:CDS |
| TGAAACTGTTCTTCAGACTC+AGG | 0.533405 | 8.4:+79605323 | MS.gene58501:CDS |
| GACAATGGCATAGCTAAGAA+TGG | 0.533653 | 8.4:+79607091 | MS.gene58501:CDS |
| ACCTCCCGGAAGCCATAGAA+TGG | 0.535315 | 8.4:-79608948 | None:intergenic |
| GAAAACTTAAAGATGTGAGA+TGG | 0.535360 | 8.4:+79609080 | MS.gene58501:CDS |
| GAGACTAAAGCGGAAGAAGA+AGG | 0.536295 | 8.4:+79608815 | MS.gene58501:CDS |
| CATCAGAGTTGACAGGGTCA+TGG | 0.540108 | 8.4:+79608753 | MS.gene58501:CDS |
| GGTATTCTATGCATCGGAGT+TGG | 0.543166 | 8.4:+79609001 | MS.gene58501:CDS |
| CTTCAAGAAAAGTGATGTGA+TGG | 0.543502 | 8.4:+79607204 | MS.gene58501:CDS |
| GTACAGAAACTCTGAAGAAG+AGG | 0.545629 | 8.4:+79608864 | MS.gene58501:CDS |
| TTAGTCTCCTCCCCATAGAC+CGG | 0.546679 | 8.4:-79608800 | None:intergenic |
| GTCATCAACACAAGTAGGAC+TGG | 0.557404 | 8.4:-79608171 | None:intergenic |
| TATGTTGATATCAATAAGGA+TGG | 0.564472 | 8.4:+79608980 | MS.gene58501:CDS |
| CACCCACTGAAATATTCATA+GGG | 0.565047 | 8.4:-79607511 | None:intergenic |
| GTTGGCTGGTACTCTGATGA+AGG | 0.567557 | 8.4:+79609019 | MS.gene58501:CDS |
| CTTTGAAATCAGCGCTACTC+CGG | 0.574322 | 8.4:+79608781 | MS.gene58501:CDS |
| TCTTCAGAGTTTCTGTACAA+AGG | 0.577038 | 8.4:-79608859 | None:intergenic |
| CATAATCTCTTTCCATCACA+AGG | 0.578509 | 8.4:-79609048 | None:intergenic |
| TATAGGAGCTTTAAGATCAC+CGG | 0.582052 | 8.4:-79607116 | None:intergenic |
| TTGCTGTGTATGAAGAGGAA+TGG | 0.582897 | 8.4:+79608147 | MS.gene58501:CDS |
| ACTACTTTGGCGAGGAGGAG+AGG | 0.584851 | 8.4:+79608906 | MS.gene58501:CDS |
| AAAGAGTATAGCAGTCGTAA+AGG | 0.589911 | 8.4:-79606958 | None:intergenic |
| CGCTACTCCGGTCTATGGGG+AGG | 0.591916 | 8.4:+79608793 | MS.gene58501:CDS |
| AGTGGAATTTGGAAAGGTGT+AGG | 0.593266 | 8.4:+79606872 | MS.gene58501:CDS |
| TGAAGGAATCAACCTTGTGA+TGG | 0.594121 | 8.4:+79609036 | MS.gene58501:CDS |
| CCAATCCATCAGAGTTGACA+GGG | 0.594885 | 8.4:+79608747 | MS.gene58501:CDS |
| TACATCTCAAATCCAAAGGA+AGG | 0.595112 | 8.4:+79607018 | MS.gene58501:CDS |
| AAGGATGGTATTCTATGCAT+CGG | 0.599587 | 8.4:+79608995 | MS.gene58501:CDS |
| TGCCAACTACTTTGGCGAGG+AGG | 0.603070 | 8.4:+79608901 | MS.gene58501:CDS |
| AACGTACATCTCAAATCCAA+AGG | 0.605463 | 8.4:+79607014 | MS.gene58501:CDS |
| CTCATGTCATCAACACAAGT+AGG | 0.612339 | 8.4:-79608176 | None:intergenic |
| GGCCCTATGAATATTTCAGT+GGG | 0.617268 | 8.4:+79607509 | MS.gene58501:CDS |
| AACCAGTAATAAAACCAGCA+TGG | 0.618754 | 8.4:+79606828 | MS.gene58501:CDS |
| TCTGAAGAAGAGGAGCTCGC+CGG | 0.619209 | 8.4:+79608874 | MS.gene58501:CDS |
| CAGGATGGATCTTATTCTAG+GGG | 0.620220 | 8.4:+79607488 | MS.gene58501:intron |
| TCTGTACAAAGGTAGACATA+CGG | 0.623226 | 8.4:-79608848 | None:intergenic |
| AGTCTCAGTGGAATTTGGAA+AGG | 0.623926 | 8.4:+79606866 | MS.gene58501:CDS |
| GGGCCCTATGAATATTTCAG+TGG | 0.628624 | 8.4:+79607508 | MS.gene58501:CDS |
| CAGCGCTACTCCGGTCTATG+GGG | 0.629844 | 8.4:+79608790 | MS.gene58501:CDS |
| GATGGAAAGAGATTATGGGT+TGG | 0.632791 | 8.4:+79609054 | MS.gene58501:CDS |
| TGTGATGGAAGAAGATGTCA+TGG | 0.637077 | 8.4:+79607219 | MS.gene58501:CDS |
| ACTATAGAATTCATAAATGG+CGG | 0.642562 | 8.4:+79608101 | MS.gene58501:CDS |
| TACTTACTTCAAAGTAAACA+AGG | 0.646661 | 8.4:-79607255 | None:intergenic |
| CCGCAACAAGTTGAAGACAA+TGG | 0.648696 | 8.4:+79607076 | MS.gene58501:CDS |
| GAGAGTTGCTGTGTATGAAG+AGG | 0.667649 | 8.4:+79608142 | MS.gene58501:CDS |
| CTATGGGGAGGAGACTAAAG+CGG | 0.670545 | 8.4:+79608805 | MS.gene58501:CDS |
| ACATTTGCTAGCAGTCTCAG+TGG | 0.670727 | 8.4:+79606854 | MS.gene58501:CDS |
| TAGTGCCAACTACTTTGGCG+AGG | 0.679262 | 8.4:+79608898 | MS.gene58501:CDS |
| CTACTTGTGTTGATGACATG+AGG | 0.683815 | 8.4:+79608177 | MS.gene58501:CDS |
| GTACGTTCATCCGAATGCGA+CGG | 0.691972 | 8.4:-79606998 | None:intergenic |
| ACCATTCTATGGCTTCCGGG+AGG | 0.697610 | 8.4:+79608947 | MS.gene58501:CDS |
| ATTCTATAGTATGGACAATG+CGG | 0.711770 | 8.4:-79608088 | None:intergenic |
| GTGATGGAAGAAGATGTCAT+GGG | 0.752957 | 8.4:+79607220 | MS.gene58501:CDS |
| ACAAAGGTAGACATACGGAG+CGG | 0.804538 | 8.4:-79608843 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATCTTATTGTTAATTATT+AGG | - | chr8.4:79608575-79608594 | None:intergenic | 10.0% |
| !! | AACAAATATGTTTATATTAC+CGG | - | chr8.4:79607677-79607696 | None:intergenic | 15.0% |
| !! | AACACAATTTCATAAAAAAA+AGG | - | chr8.4:79605491-79605510 | None:intergenic | 15.0% |
| !! | AATAACTTTATTGAAATCAA+TGG | - | chr8.4:79608660-79608679 | None:intergenic | 15.0% |
| !! | AGTTATTTACAAATGATAAA+AGG | - | chr8.4:79607453-79607472 | None:intergenic | 15.0% |
| !! | ATCTTCAAATAAAATTTGAA+TGG | - | chr8.4:79606263-79606282 | None:intergenic | 15.0% |
| !! | TAGAAATAAAACAAAAAGAA+GGG | - | chr8.4:79606703-79606722 | None:intergenic | 15.0% |
| !! | TATAGAAAGTTTATTTCAAA+TGG | + | chr8.4:79606066-79606085 | MS.gene58501:intron | 15.0% |
| !!! | AAAATTAAAATTTGCTTCTA+CGG | + | chr8.4:79607803-79607822 | MS.gene58501:intron | 15.0% |
| !!! | AATGTTTTTTTTTTTTCATC+TGG | + | chr8.4:79605347-79605366 | MS.gene58501:intron | 15.0% |
| !!! | AGAAGCAAATTTTAATTTTA+TGG | - | chr8.4:79607802-79607821 | None:intergenic | 15.0% |
| !!! | ATAAAATTTATGTTTTCTGT+TGG | + | chr8.4:79607887-79607906 | MS.gene58501:intron | 15.0% |
| !!! | ATGTTTTTTTTTTTTCATCT+GGG | + | chr8.4:79605348-79605367 | MS.gene58501:intron | 15.0% |
| !!! | TTTAAAATAAATGTATAGTG+TGG | + | chr8.4:79606036-79606055 | MS.gene58501:intron | 15.0% |
| !! | AATGAAATGATAAATAGTGA+AGG | + | chr8.4:79608314-79608333 | MS.gene58501:intron | 20.0% |
| !! | AATGTTATCCACAAAAATAA+TGG | - | chr8.4:79606621-79606640 | None:intergenic | 20.0% |
| !! | AGAAATAAAACAAAAAGAAG+GGG | - | chr8.4:79606702-79606721 | None:intergenic | 20.0% |
| !! | AGCTACAAAATAAATACATT+AGG | - | chr8.4:79607297-79607316 | None:intergenic | 20.0% |
| !! | ATGAAATGATAAATAGTGAA+GGG | + | chr8.4:79608315-79608334 | MS.gene58501:intron | 20.0% |
| !! | ATGTTATGTTGATATCAATA+AGG | + | chr8.4:79608976-79608995 | MS.gene58501:CDS | 20.0% |
| !! | CATACTATAGAATTCATAAA+TGG | + | chr8.4:79608098-79608117 | MS.gene58501:CDS | 20.0% |
| !! | CATTTATGAATTCTATAGTA+TGG | - | chr8.4:79608100-79608119 | None:intergenic | 20.0% |
| !! | GATGTTGAAATTGATAAAAT+TGG | + | chr8.4:79606013-79606032 | MS.gene58501:intron | 20.0% |
| !! | GGTAATATAAACATATTTGT+TGG | + | chr8.4:79607676-79607695 | MS.gene58501:intron | 20.0% |
| !! | GTAGAAATAAAACAAAAAGA+AGG | - | chr8.4:79606704-79606723 | None:intergenic | 20.0% |
| !! | GTGTTAAAAAATATTTACAC+CGG | - | chr8.4:79605572-79605591 | None:intergenic | 20.0% |
| !! | TTTAGCACAAAATGTAAATA+AGG | - | chr8.4:79608211-79608230 | None:intergenic | 20.0% |
| !!! | AATTTTAATTTTATGGCATG+CGG | - | chr8.4:79607795-79607814 | None:intergenic | 20.0% |
| !!! | GTTTTAAAATAACAAATGCA+TGG | - | chr8.4:79607751-79607770 | None:intergenic | 20.0% |
| ! | AAAGAGAAAGAAACAATCAA+CGG | - | chr8.4:79607426-79607445 | None:intergenic | 25.0% |
| ! | AAATAAATGTATAGTGTGGT+TGG | + | chr8.4:79606040-79606059 | MS.gene58501:intron | 25.0% |
| ! | AACTACATTTGATAAATTGC+AGG | + | chr8.4:79607469-79607488 | MS.gene58501:intron | 25.0% |
| ! | AACTAGGGTTAAATTGATTA+GGG | + | chr8.4:79605431-79605450 | MS.gene58501:intron | 25.0% |
| ! | AACTTTATTGAAATCAATGG+AGG | - | chr8.4:79608657-79608676 | None:intergenic | 25.0% |
| ! | AATAAATGTATAGTGTGGTT+GGG | + | chr8.4:79606041-79606060 | MS.gene58501:intron | 25.0% |
| ! | ACATAGTACTAAATGTAGTA+TGG | + | chr8.4:79608452-79608471 | MS.gene58501:intron | 25.0% |
| ! | ACTATAGAATTCATAAATGG+CGG | + | chr8.4:79608101-79608120 | MS.gene58501:CDS | 25.0% |
| ! | ATAACATTCAACTTCAAGTA+CGG | + | chr8.4:79606633-79606652 | MS.gene58501:intron | 25.0% |
| ! | ATGAATTGAGTTTATTGTGT+TGG | + | chr8.4:79606183-79606202 | MS.gene58501:intron | 25.0% |
| ! | TAACTAGGGTTAAATTGATT+AGG | + | chr8.4:79605430-79605449 | MS.gene58501:intron | 25.0% |
| ! | TACTTACTTCAAAGTAAACA+AGG | - | chr8.4:79607258-79607277 | None:intergenic | 25.0% |
| ! | TATGCATCATAATTAGGAAT+AGG | + | chr8.4:79605735-79605754 | MS.gene58501:intron | 25.0% |
| ! | TATGTTGATATCAATAAGGA+TGG | + | chr8.4:79608980-79608999 | MS.gene58501:CDS | 25.0% |
| ! | TCAACTAACTATTCCATAAA+AGG | - | chr8.4:79605992-79606011 | None:intergenic | 25.0% |
| ! | TCGTAAACTATGGAAATTAA+TGG | - | chr8.4:79606492-79606511 | None:intergenic | 25.0% |
| !! | AAAGTTTTTGTCTTTTGCTT+TGG | + | chr8.4:79605398-79605417 | MS.gene58501:intron | 25.0% |
| !! | AACGTAAATCTTTTCATACT+AGG | - | chr8.4:79608617-79608636 | None:intergenic | 25.0% |
| !! | AAGTTTTTGTCTTTTGCTTT+GGG | + | chr8.4:79605399-79605418 | MS.gene58501:intron | 25.0% |
| !! | ACAAATACCCAAATGAATTT+TGG | - | chr8.4:79606664-79606683 | None:intergenic | 25.0% |
| !! | ATAAACATATTTGTTGGTGT+TGG | + | chr8.4:79607682-79607701 | MS.gene58501:intron | 25.0% |
| !! | GATCAGCTTATATATGTTTT+AGG | - | chr8.4:79606157-79606176 | None:intergenic | 25.0% |
| !! | GTACATTTAAAACAGTGATA+TGG | + | chr8.4:79608688-79608707 | MS.gene58501:intron | 25.0% |
| !! | TTATCCACAAAAATAATGGA+TGG | - | chr8.4:79606617-79606636 | None:intergenic | 25.0% |
| !!! | AAATCCATCCATTATTTTTG+TGG | + | chr8.4:79606610-79606629 | MS.gene58501:intron | 25.0% |
| !!! | ACGATTTGTTATTTTTTCAC+TGG | - | chr8.4:79607158-79607177 | None:intergenic | 25.0% |
| !!! | ATTTTAATTTTATGGCATGC+GGG | - | chr8.4:79607794-79607813 | None:intergenic | 25.0% |
| !!! | GTTCTTTTTCTTTGAGAAAA+TGG | - | chr8.4:79608728-79608747 | None:intergenic | 25.0% |
| !!! | TAGTTCTAAATAGCTTATTG+CGG | - | chr8.4:79606398-79606417 | None:intergenic | 25.0% |
| !!! | TGGTTATGATGTTTTTTGAA+TGG | + | chr8.4:79605669-79605688 | MS.gene58501:intron | 25.0% |
| AAATCCAAAGGAAGGTTAAT+TGG | + | chr8.4:79607026-79607045 | MS.gene58501:CDS | 30.0% | |
| AAGTCAAAGGATTCAAATGT+AGG | - | chr8.4:79607187-79607206 | None:intergenic | 30.0% | |
| AATCCAAAGGAAGGTTAATT+GGG | + | chr8.4:79607027-79607046 | MS.gene58501:CDS | 30.0% | |
| AATTTGAATGGAGAAGTTTC+TGG | - | chr8.4:79606251-79606270 | None:intergenic | 30.0% | |
| ACATTTGATAAATTGCAGGA+TGG | + | chr8.4:79607473-79607492 | MS.gene58501:intron | 30.0% | |
| ACTTGTTCAAACTTGAAAGT+TGG | - | chr8.4:79607566-79607585 | None:intergenic | 30.0% | |
| ATGAAAACAAATGACCAATG+AGG | - | chr8.4:79605886-79605905 | None:intergenic | 30.0% | |
| ATGGAATCATGAAGAATTCT+TGG | + | chr8.4:79605780-79605799 | MS.gene58501:intron | 30.0% | |
| ATTCTATAGTATGGACAATG+CGG | - | chr8.4:79608091-79608110 | None:intergenic | 30.0% | |
| CACATAGCAAGAAAATCAAT+AGG | - | chr8.4:79608385-79608404 | None:intergenic | 30.0% | |
| CATCATAATTAGGAATAGGT+AGG | + | chr8.4:79605739-79605758 | MS.gene58501:intron | 30.0% | |
| GAAAACTTAAAGATGTGAGA+TGG | + | chr8.4:79609080-79609099 | MS.gene58501:CDS | 30.0% | |
| GGCATTACCAAAATTCATTT+GGG | + | chr8.4:79606654-79606673 | MS.gene58501:intron | 30.0% | |
| TCTCTGCAATAAATACTTGA+AGG | - | chr8.4:79608281-79608300 | None:intergenic | 30.0% | |
| TGTTCCATTACTTACACAAT+CGG | - | chr8.4:79606094-79606113 | None:intergenic | 30.0% | |
| TTAATTCCAACGAGTAAGTT+TGG | - | chr8.4:79606570-79606589 | None:intergenic | 30.0% | |
| TTCTGAGTTTCATGTATGAT+TGG | + | chr8.4:79605649-79605668 | MS.gene58501:intron | 30.0% | |
| TTCTTGACACTTATTTCCAT+TGG | - | chr8.4:79606932-79606951 | None:intergenic | 30.0% | |
| TTTGTTAGTGACTGAAGAAT+TGG | + | chr8.4:79607318-79607337 | MS.gene58501:intron | 30.0% | |
| ! | GTGAGTACTTTTATCTAAAC+TGG | - | chr8.4:79607866-79607885 | None:intergenic | 30.0% |
| ! | TTGTGATGGAAAGAGATTAT+GGG | + | chr8.4:79609050-79609069 | MS.gene58501:CDS | 30.0% |
| ! | TTTGGGATGAGAATTAACTA+GGG | + | chr8.4:79605416-79605435 | MS.gene58501:intron | 30.0% |
| ! | TTTTTCCAGTGTTTGGTTAA+AGG | + | chr8.4:79608050-79608069 | MS.gene58501:intron | 30.0% |
| !! | ATCACTTTTCTTGAAGTCAA+AGG | - | chr8.4:79607200-79607219 | None:intergenic | 30.0% |
| !! | GAACATTATACTGATTTGAG+TGG | + | chr8.4:79606792-79606811 | MS.gene58501:intron | 30.0% |
| !! | GTCATTTGTTTTCATGGATT+AGG | + | chr8.4:79605891-79605910 | MS.gene58501:intron | 30.0% |
| !! | TCATTGGTCATTTGTTTTCA+TGG | + | chr8.4:79605885-79605904 | MS.gene58501:intron | 30.0% |
| AAATTCCATTCACGCTATAG+TGG | - | chr8.4:79606357-79606376 | None:intergenic | 35.0% | |
| AACCAGTAATAAAACCAGCA+TGG | + | chr8.4:79606828-79606847 | MS.gene58501:CDS | 35.0% | |
| AACGTACATCTCAAATCCAA+AGG | + | chr8.4:79607014-79607033 | MS.gene58501:CDS | 35.0% | |
| AAGGATGGTATTCTATGCAT+CGG | + | chr8.4:79608995-79609014 | MS.gene58501:CDS | 35.0% | |
| ACAAATTCCATGCTTGAACA+AGG | - | chr8.4:79607944-79607963 | None:intergenic | 35.0% | |
| ACAGCGTATGCATCATAATT+AGG | + | chr8.4:79605729-79605748 | MS.gene58501:intron | 35.0% | |
| AGAGTCTATGTACAGAAGTT+TGG | + | chr8.4:79606291-79606310 | MS.gene58501:intron | 35.0% | |
| AGATTATTACCGATGAATGG+TGG | + | chr8.4:79606131-79606150 | MS.gene58501:intron | 35.0% | |
| CAACGAGTAAGTTTGGAAAA+CGG | - | chr8.4:79606563-79606582 | None:intergenic | 35.0% | |
| CACCCACTGAAATATTCATA+GGG | - | chr8.4:79607514-79607533 | None:intergenic | 35.0% | |
| CACTCAGTTAAACAAAGTTC+AGG | - | chr8.4:79606211-79606230 | None:intergenic | 35.0% | |
| CATAATCTCTTTCCATCACA+AGG | - | chr8.4:79609051-79609070 | None:intergenic | 35.0% | |
| CGGAACAAATGAAAATCGAT+TGG | + | chr8.4:79607823-79607842 | MS.gene58501:intron | 35.0% | |
| CGGCATTACCAAAATTCATT+TGG | + | chr8.4:79606653-79606672 | MS.gene58501:intron | 35.0% | |
| CTTCAAGAAAAGTGATGTGA+TGG | + | chr8.4:79607204-79607223 | MS.gene58501:CDS | 35.0% | |
| CTTCATCAATTCCTTTACTG+TGG | + | chr8.4:79608521-79608540 | MS.gene58501:intron | 35.0% | |
| GAAGGAAAATACCACAGTAA+AGG | - | chr8.4:79608535-79608554 | None:intergenic | 35.0% | |
| GAATGACACTAAGATGATGA+AGG | - | chr8.4:79608553-79608572 | None:intergenic | 35.0% | |
| GACAGATTATTACCGATGAA+TGG | + | chr8.4:79606128-79606147 | MS.gene58501:intron | 35.0% | |
| GTACTAAATGTAGTATGGCA+TGG | + | chr8.4:79608457-79608476 | MS.gene58501:intron | 35.0% | |
| GTAGTGTATAACTCTGAACA+TGG | + | chr8.4:79605761-79605780 | MS.gene58501:intron | 35.0% | |
| GTGTTGTCAATCGTAAACTA+TGG | - | chr8.4:79606502-79606521 | None:intergenic | 35.0% | |
| TACATCTCAAATCCAAAGGA+AGG | + | chr8.4:79607018-79607037 | MS.gene58501:CDS | 35.0% | |
| TAGCTTATTGCGGAACAATA+AGG | - | chr8.4:79606388-79606407 | None:intergenic | 35.0% | |
| TCTGTACAAAGGTAGACATA+CGG | - | chr8.4:79608851-79608870 | None:intergenic | 35.0% | |
| TCTTCAGAGTTTCTGTACAA+AGG | - | chr8.4:79608862-79608881 | None:intergenic | 35.0% | |
| TGATACTAACTCGTTGATAC+CGG | + | chr8.4:79607655-79607674 | MS.gene58501:intron | 35.0% | |
| TTGAATTCCTTGTTCAAGCA+TGG | + | chr8.4:79607934-79607953 | MS.gene58501:intron | 35.0% | |
| ! | AAAGAGTATAGCAGTCGTAA+AGG | - | chr8.4:79606961-79606980 | None:intergenic | 35.0% |
| ! | ACTTCTCTTTTTCCAGTGTT+TGG | + | chr8.4:79608043-79608062 | MS.gene58501:intron | 35.0% |
| ! | CATTTTCTACAGTTTAGTGC+AGG | - | chr8.4:79606754-79606773 | None:intergenic | 35.0% |
| ! | CTGAACTTTGTTTAACTGAG+TGG | + | chr8.4:79606209-79606228 | MS.gene58501:intron | 35.0% |
| ! | CTTGTGATGGAAAGAGATTA+TGG | + | chr8.4:79609049-79609068 | MS.gene58501:CDS | 35.0% |
| !! | CTTTGGGATGAGAATTAACT+AGG | + | chr8.4:79605415-79605434 | MS.gene58501:intron | 35.0% |
| !! | TATAGGAGCTTTAAGATCAC+CGG | - | chr8.4:79607119-79607138 | None:intergenic | 35.0% |
| !!! | TTCCATGCTGGTTTTATTAC+TGG | - | chr8.4:79606833-79606852 | None:intergenic | 35.0% |
| ACTTCAAAGTAAACAAGGCC+AGG | - | chr8.4:79607253-79607272 | None:intergenic | 40.0% | |
| AGTCTCAGTGGAATTTGGAA+AGG | + | chr8.4:79606866-79606885 | MS.gene58501:CDS | 40.0% | |
| AGTCTGTGTCATCGTTTCAT+AGG | - | chr8.4:79607635-79607654 | None:intergenic | 40.0% | |
| ATCTTAAAGCTCCTATAGCC+GGG | + | chr8.4:79607122-79607141 | MS.gene58501:CDS | 40.0% | |
| ATGGAACACAAACAATGCCA+TGG | + | chr8.4:79606106-79606125 | MS.gene58501:intron | 40.0% | |
| ATTTGAGTGGACACTCTTTC+AGG | + | chr8.4:79606805-79606824 | MS.gene58501:intron | 40.0% | |
| CAATCAACGGTAGTTTATGC+TGG | - | chr8.4:79607413-79607432 | None:intergenic | 40.0% | |
| CAGGATGGATCTTATTCTAG+GGG | + | chr8.4:79607488-79607507 | MS.gene58501:intron | 40.0% | |
| CATCGGTAATAATCTGTCCA+TGG | - | chr8.4:79606126-79606145 | None:intergenic | 40.0% | |
| CCATAAAAGGTTGCTGTCTT+TGG | - | chr8.4:79605979-79605998 | None:intergenic | 40.0% | |
| CTATACTCTTTCCCGTATAG+AGG | + | chr8.4:79606970-79606989 | MS.gene58501:CDS | 40.0% | |
| CTCATGTCATCAACACAAGT+AGG | - | chr8.4:79608179-79608198 | None:intergenic | 40.0% | |
| GACAATGGCATAGCTAAGAA+TGG | + | chr8.4:79607091-79607110 | MS.gene58501:CDS | 40.0% | |
| GATCTTAAAGCTCCTATAGC+CGG | + | chr8.4:79607121-79607140 | MS.gene58501:CDS | 40.0% | |
| GATGGAAAGAGATTATGGGT+TGG | + | chr8.4:79609054-79609073 | MS.gene58501:CDS | 40.0% | |
| GCACCCACTGAAATATTCAT+AGG | - | chr8.4:79607515-79607534 | None:intergenic | 40.0% | |
| GCAGGATGGATCTTATTCTA+GGG | + | chr8.4:79607487-79607506 | MS.gene58501:intron | 40.0% | |
| GGCCCTATGAATATTTCAGT+GGG | + | chr8.4:79607509-79607528 | MS.gene58501:CDS | 40.0% | |
| GTCTGTGTCATCGTTTCATA+GGG | - | chr8.4:79607634-79607653 | None:intergenic | 40.0% | |
| GTGGATAATCATTGCCTCAT+TGG | + | chr8.4:79605869-79605888 | MS.gene58501:intron | 40.0% | |
| TAAGAACATGCACACACCAA+AGG | - | chr8.4:79608484-79608503 | None:intergenic | 40.0% | |
| TATGACCATTCTATGGCTTC+CGG | + | chr8.4:79608943-79608962 | MS.gene58501:CDS | 40.0% | |
| TATTGTGCTGTATACACAGC+CGG | + | chr8.4:79605550-79605569 | MS.gene58501:intron | 40.0% | |
| TCACCCAATTAACCTTCCTT+TGG | - | chr8.4:79607033-79607052 | None:intergenic | 40.0% | |
| TGAAACTGTTCTTCAGACTC+AGG | + | chr8.4:79605323-79605342 | MS.gene58501:CDS | 40.0% | |
| TGAAGGAATCAACCTTGTGA+TGG | + | chr8.4:79609036-79609055 | MS.gene58501:CDS | 40.0% | |
| TGCAGGATATGACCATTCTA+TGG | + | chr8.4:79608936-79608955 | MS.gene58501:CDS | 40.0% | |
| TGCAGGATGGATCTTATTCT+AGG | + | chr8.4:79607486-79607505 | MS.gene58501:intron | 40.0% | |
| TGCTGTGTATGAAGAGGAAT+GGG | + | chr8.4:79608148-79608167 | MS.gene58501:CDS | 40.0% | |
| TGGGTGACTTTGAATCCTTA+TGG | + | chr8.4:79607046-79607065 | MS.gene58501:CDS | 40.0% | |
| TTCTCCAATCACTGCTGAAA+TGG | + | chr8.4:79606904-79606923 | MS.gene58501:CDS | 40.0% | |
| TTGCTGTGTATGAAGAGGAA+TGG | + | chr8.4:79608147-79608166 | MS.gene58501:CDS | 40.0% | |
| ! | AGTGGAATTTGGAAAGGTGT+AGG | + | chr8.4:79606872-79606891 | MS.gene58501:CDS | 40.0% |
| ! | CCAAAGACAGCAACCTTTTA+TGG | + | chr8.4:79605976-79605995 | MS.gene58501:intron | 40.0% |
| ! | CGTTTTCCAAACTTACTCGT+TGG | + | chr8.4:79606561-79606580 | MS.gene58501:intron | 40.0% |
| ! | GTACAGAAACTCTGAAGAAG+AGG | + | chr8.4:79608864-79608883 | MS.gene58501:CDS | 40.0% |
| ! | GTGATGGAAGAAGATGTCAT+GGG | + | chr8.4:79607220-79607239 | MS.gene58501:CDS | 40.0% |
| ! | TGTGATGGAAGAAGATGTCA+TGG | + | chr8.4:79607219-79607238 | MS.gene58501:CDS | 40.0% |
| !! | ATGGATTAGGATAGCGACTA+GGG | + | chr8.4:79605904-79605923 | MS.gene58501:intron | 40.0% |
| !! | CCATTGTCTTCAACTTGTTG+CGG | - | chr8.4:79607079-79607098 | None:intergenic | 40.0% |
| !! | CTACTTGTGTTGATGACATG+AGG | + | chr8.4:79608177-79608196 | MS.gene58501:CDS | 40.0% |
| !! | GAAAGAGATTATGGGTTGGA+TGG | + | chr8.4:79609058-79609077 | MS.gene58501:CDS | 40.0% |
| !! | TATTTGTTGGTGTTGGACCT+CGG | + | chr8.4:79607689-79607708 | MS.gene58501:intron | 40.0% |
| !! | TGTTTTAGGCCACCATTCAT+CGG | - | chr8.4:79606143-79606162 | None:intergenic | 40.0% |
| ACAAAGGTAGACATACGGAG+CGG | - | chr8.4:79608846-79608865 | None:intergenic | 45.0% | |
| ACATAACATGTCACACCTCC+CGG | - | chr8.4:79608965-79608984 | None:intergenic | 45.0% | |
| ACCAATCCATCAGAGTTGAC+AGG | + | chr8.4:79608746-79608765 | MS.gene58501:CDS | 45.0% | |
| ACTGTTGCGTAGTACTGTAG+CGG | + | chr8.4:79606454-79606473 | MS.gene58501:intron | 45.0% | |
| ATCCACCACCTTAAACCAGT+AGG | - | chr8.4:79605840-79605859 | None:intergenic | 45.0% | |
| ATGACCATTCTATGGCTTCC+GGG | + | chr8.4:79608944-79608963 | MS.gene58501:CDS | 45.0% | |
| CCAAAGTAGTTGGCACTATC+CGG | - | chr8.4:79608896-79608915 | None:intergenic | 45.0% | |
| CCAATCCATCAGAGTTGACA+GGG | + | chr8.4:79608747-79608766 | MS.gene58501:CDS | 45.0% | |
| CTAGCAAATGTGTTCCATGC+TGG | - | chr8.4:79606845-79606864 | None:intergenic | 45.0% | |
| CTAGCAGTCTCAGTGGAATT+TGG | + | chr8.4:79606861-79606880 | MS.gene58501:CDS | 45.0% | |
| GAGACTAAAGCGGAAGAAGA+AGG | + | chr8.4:79608815-79608834 | MS.gene58501:CDS | 45.0% | |
| GAGAGTTGCTGTGTATGAAG+AGG | + | chr8.4:79608142-79608161 | MS.gene58501:CDS | 45.0% | |
| GGCATAGCTAAGAATGGTTC+CGG | + | chr8.4:79607097-79607116 | MS.gene58501:CDS | 45.0% | |
| GGCTCCGATTGTGTAAGTAA+TGG | + | chr8.4:79606087-79606106 | MS.gene58501:intron | 45.0% | |
| GGGCCCTATGAATATTTCAG+TGG | + | chr8.4:79607508-79607527 | MS.gene58501:CDS | 45.0% | |
| GGTATTCTATGCATCGGAGT+TGG | + | chr8.4:79609001-79609020 | MS.gene58501:CDS | 45.0% | |
| GTCATCAACACAAGTAGGAC+TGG | - | chr8.4:79608174-79608193 | None:intergenic | 45.0% | |
| GTGTCATCGTTTCATAGGGA+AGG | - | chr8.4:79607630-79607649 | None:intergenic | 45.0% | |
| TGGTTAAAGGCTGCCACAAA+AGG | + | chr8.4:79608063-79608082 | MS.gene58501:CDS | 45.0% | |
| TGTAGTATGGCATGGACCTT+TGG | + | chr8.4:79608465-79608484 | MS.gene58501:intron | 45.0% | |
| TGTTGCGGCATTTCACCATA+AGG | - | chr8.4:79607064-79607083 | None:intergenic | 45.0% | |
| ! | ACATTTGCTAGCAGTCTCAG+TGG | + | chr8.4:79606854-79606873 | MS.gene58501:CDS | 45.0% |
| ! | CCGCAACAAGTTGAAGACAA+TGG | + | chr8.4:79607076-79607095 | MS.gene58501:CDS | 45.0% |
| !! | CATGGATTAGGATAGCGACT+AGG | + | chr8.4:79605903-79605922 | MS.gene58501:intron | 45.0% |
| !! | CTTTGAAATCAGCGCTACTC+CGG | + | chr8.4:79608781-79608800 | MS.gene58501:CDS | 45.0% |
| !! | TGAGTGAGCCTACTGGTTTA+AGG | + | chr8.4:79605829-79605848 | MS.gene58501:intron | 45.0% |
| AACCAGTAGGCTCACTCAGA+AGG | - | chr8.4:79605827-79605846 | None:intergenic | 50.0% | |
| ATGGCATGCGGGAGAAAACT+GGG | - | chr8.4:79607783-79607802 | None:intergenic | 50.0% | |
| CACTGCTGAAATGGAGCCAA+TGG | + | chr8.4:79606913-79606932 | MS.gene58501:CDS | 50.0% | |
| CATCAGAGTTGACAGGGTCA+TGG | + | chr8.4:79608753-79608772 | MS.gene58501:CDS | 50.0% | |
| CATGACCCTGTCAACTCTGA+TGG | - | chr8.4:79608755-79608774 | None:intergenic | 50.0% | |
| CCGGATAGTGCCAACTACTT+TGG | + | chr8.4:79608893-79608912 | MS.gene58501:CDS | 50.0% | |
| CTATGGGGAGGAGACTAAAG+CGG | + | chr8.4:79608805-79608824 | MS.gene58501:CDS | 50.0% | |
| GGCAGCCTTTAACCAAACAC+TGG | - | chr8.4:79608058-79608077 | None:intergenic | 50.0% | |
| GGCTCCATTTCAGCAGTGAT+TGG | - | chr8.4:79606911-79606930 | None:intergenic | 50.0% | |
| GTACGTTCATCCGAATGCGA+CGG | - | chr8.4:79607001-79607020 | None:intergenic | 50.0% | |
| GTTGCTACTGACACCACAGA+AGG | - | chr8.4:79607723-79607742 | None:intergenic | 50.0% | |
| GTTGGCTGGTACTCTGATGA+AGG | + | chr8.4:79609019-79609038 | MS.gene58501:CDS | 50.0% | |
| TAGCGCCACTATAGCGTGAA+TGG | + | chr8.4:79606349-79606368 | MS.gene58501:intron | 50.0% | |
| TAGTGCCAACTACTTTGGCG+AGG | + | chr8.4:79608898-79608917 | MS.gene58501:CDS | 50.0% | |
| TATGGCATGCGGGAGAAAAC+TGG | - | chr8.4:79607784-79607803 | None:intergenic | 50.0% | |
| TTAGTCTCCTCCCCATAGAC+CGG | - | chr8.4:79608803-79608822 | None:intergenic | 50.0% | |
| TTCTATGCATCGGAGTTGGC+TGG | + | chr8.4:79609005-79609024 | MS.gene58501:CDS | 50.0% | |
| ! | CCCTGTCAACTCTGATGGAT+TGG | - | chr8.4:79608750-79608769 | None:intergenic | 50.0% |
| ! | GGACAATGCGGATCCTTTTG+TGG | - | chr8.4:79608079-79608098 | None:intergenic | 50.0% |
| ! | TAGGCTCACTCAGAAGGCAT+GGG | - | chr8.4:79605821-79605840 | None:intergenic | 50.0% |
| ! | TTCACTGGATTTTCGCAGCC+CGG | - | chr8.4:79607143-79607162 | None:intergenic | 50.0% |
| !! | AGCCTACTGGTTTAAGGTGG+TGG | + | chr8.4:79605835-79605854 | MS.gene58501:intron | 50.0% |
| !! | GGTGGTGGATATTGTGCTAG+TGG | + | chr8.4:79605850-79605869 | MS.gene58501:intron | 50.0% |
| !! | GTGAGCCTACTGGTTTAAGG+TGG | + | chr8.4:79605832-79605851 | MS.gene58501:intron | 50.0% |
| ACCATTCTATGGCTTCCGGG+AGG | + | chr8.4:79608947-79608966 | MS.gene58501:CDS | 55.0% | |
| ACCTCCCGGAAGCCATAGAA+TGG | - | chr8.4:79608951-79608970 | None:intergenic | 55.0% | |
| ACTACTTTGGCGAGGAGGAG+AGG | + | chr8.4:79608906-79608925 | MS.gene58501:CDS | 55.0% | |
| ATCAGCGCTACTCCGGTCTA+TGG | + | chr8.4:79608788-79608807 | MS.gene58501:CDS | 55.0% | |
| ATGCGGGAGAAAACTGGGGA+GGG | - | chr8.4:79607778-79607797 | None:intergenic | 55.0% | |
| CTCCTCCTCGCCAAAGTAGT+TGG | - | chr8.4:79608906-79608925 | None:intergenic | 55.0% | |
| GTAGGCTCACTCAGAAGGCA+TGG | - | chr8.4:79605822-79605841 | None:intergenic | 55.0% | |
| TCAGCGCTACTCCGGTCTAT+GGG | + | chr8.4:79608789-79608808 | MS.gene58501:CDS | 55.0% | |
| TCTGAAGAAGAGGAGCTCGC+CGG | + | chr8.4:79608874-79608893 | MS.gene58501:CDS | 55.0% | |
| TGCCAACTACTTTGGCGAGG+AGG | + | chr8.4:79608901-79608920 | MS.gene58501:CDS | 55.0% | |
| TGCCTTCTGAGTGAGCCTAC+TGG | + | chr8.4:79605822-79605841 | MS.gene58501:intron | 55.0% | |
| TGGCATGCGGGAGAAAACTG+GGG | - | chr8.4:79607782-79607801 | None:intergenic | 55.0% | |
| ! | GATGTCATGGGCTGTGAACC+TGG | + | chr8.4:79607232-79607251 | MS.gene58501:CDS | 55.0% |
| ! | GATTTTCGCAGCCCGGCTAT+AGG | - | chr8.4:79607136-79607155 | None:intergenic | 55.0% |
| !! | TTGGTGTTGGACCTCGGACA+CGG | + | chr8.4:79607695-79607714 | MS.gene58501:intron | 55.0% |
| AGAGGCAGTGCCGTCGCATT+CGG | + | chr8.4:79606988-79607007 | MS.gene58501:CDS | 60.0% | |
| CACAGAAGGATCCGTGTCCG+AGG | - | chr8.4:79607709-79607728 | None:intergenic | 60.0% | |
| CAGCGCTACTCCGGTCTATG+GGG | + | chr8.4:79608790-79608809 | MS.gene58501:CDS | 60.0% | |
| CATGCGGGAGAAAACTGGGG+AGG | - | chr8.4:79607779-79607798 | None:intergenic | 60.0% | |
| CGACGGCACTGCCTCTATAC+GGG | - | chr8.4:79606984-79607003 | None:intergenic | 60.0% | |
| CTCGGACACGGATCCTTCTG+TGG | + | chr8.4:79607707-79607726 | MS.gene58501:intron | 60.0% | |
| GCGACGGCACTGCCTCTATA+CGG | - | chr8.4:79606985-79607004 | None:intergenic | 60.0% | |
| GGAGGAGAGGCTTGACATGC+AGG | + | chr8.4:79608919-79608938 | MS.gene58501:CDS | 60.0% | |
| TGCGGGAGAAAACTGGGGAG+GGG | - | chr8.4:79607777-79607796 | None:intergenic | 60.0% | |
| CGCTACTCCGGTCTATGGGG+AGG | + | chr8.4:79608793-79608812 | MS.gene58501:CDS | 65.0% | |
| GCGGGAGAAAACTGGGGAGG+GGG | - | chr8.4:79607776-79607795 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 79605309 | 79609122 | 79605309 | ID=MS.gene58501 |
| chr8.4 | mRNA | 79605309 | 79609122 | 79605309 | ID=MS.gene58501.t1;Parent=MS.gene58501 |
| chr8.4 | exon | 79605309 | 79605344 | 79605309 | ID=MS.gene58501.t1.exon1;Parent=MS.gene58501.t1 |
| chr8.4 | CDS | 79605309 | 79605344 | 79605309 | ID=cds.MS.gene58501.t1;Parent=MS.gene58501.t1 |
| chr8.4 | exon | 79606827 | 79607270 | 79606827 | ID=MS.gene58501.t1.exon2;Parent=MS.gene58501.t1 |
| chr8.4 | CDS | 79606827 | 79607270 | 79606827 | ID=cds.MS.gene58501.t1;Parent=MS.gene58501.t1 |
| chr8.4 | exon | 79607491 | 79607583 | 79607491 | ID=MS.gene58501.t1.exon3;Parent=MS.gene58501.t1 |
| chr8.4 | CDS | 79607491 | 79607583 | 79607491 | ID=cds.MS.gene58501.t1;Parent=MS.gene58501.t1 |
| chr8.4 | exon | 79608059 | 79608198 | 79608059 | ID=MS.gene58501.t1.exon4;Parent=MS.gene58501.t1 |
| chr8.4 | CDS | 79608059 | 79608198 | 79608059 | ID=cds.MS.gene58501.t1;Parent=MS.gene58501.t1 |
| chr8.4 | exon | 79608703 | 79609122 | 79608703 | ID=MS.gene58501.t1.exon5;Parent=MS.gene58501.t1 |
| chr8.4 | CDS | 79608703 | 79609122 | 79608703 | ID=cds.MS.gene58501.t1;Parent=MS.gene58501.t1 |
| Gene Sequence |
| Protein sequence |
