Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45918.t1 | XP_013449121.1 | 96.7 | 307 | 10 | 0 | 1 | 307 | 7 | 313 | 4.20E-171 | 610.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45918.t1 | Q8S9H7 | 60.2 | 264 | 96 | 5 | 5 | 263 | 1 | 260 | 6.1e-86 | 318.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45918.t1 | A0A072U1U5 | 96.7 | 307 | 10 | 0 | 1 | 307 | 7 | 313 | 3.0e-171 | 610.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene45918.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene45918 | 0.819399 | 1.19E-52 | -1.69E-46 |
| MS.gene049159 | MS.gene45918 | 0.849182 | 3.81E-60 | -1.69E-46 |
| MS.gene049254 | MS.gene45918 | 0.806236 | 9.07E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene45918 | 0.859471 | 4.04E-63 | -1.69E-46 |
| MS.gene049435 | MS.gene45918 | 0.815192 | 1.05E-51 | -1.69E-46 |
| MS.gene049501 | MS.gene45918 | 0.829173 | 5.97E-55 | -1.69E-46 |
| MS.gene049850 | MS.gene45918 | 0.826573 | 2.52E-54 | -1.69E-46 |
| MS.gene050020 | MS.gene45918 | 0.8496 | 2.91E-60 | -1.69E-46 |
| MS.gene05016 | MS.gene45918 | 0.813147 | 2.97E-51 | -1.69E-46 |
| MS.gene050237 | MS.gene45918 | 0.800187 | 1.62E-48 | -1.69E-46 |
| MS.gene050442 | MS.gene45918 | 0.825734 | 3.99E-54 | -1.69E-46 |
| MS.gene050586 | MS.gene45918 | 0.80465 | 1.95E-49 | -1.69E-46 |
| MS.gene050680 | MS.gene45918 | 0.8069 | 6.57E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene45918 | 0.806808 | 6.87E-50 | -1.69E-46 |
| MS.gene050721 | MS.gene45918 | 0.806347 | 8.60E-50 | -1.69E-46 |
| MS.gene050724 | MS.gene45918 | 0.806984 | 6.31E-50 | -1.69E-46 |
| MS.gene050807 | MS.gene45918 | 0.85999 | 2.82E-63 | -1.69E-46 |
| MS.gene050808 | MS.gene45918 | 0.816567 | 5.17E-52 | -1.69E-46 |
| MS.gene050815 | MS.gene45918 | 0.823851 | 1.11E-53 | -1.69E-46 |
| MS.gene050844 | MS.gene45918 | 0.836765 | 7.72E-57 | -1.69E-46 |
| MS.gene051180 | MS.gene45918 | 0.838537 | 2.71E-57 | -1.69E-46 |
| MS.gene051198 | MS.gene45918 | 0.830796 | 2.40E-55 | -1.69E-46 |
| MS.gene051247 | MS.gene45918 | 0.816656 | 4.94E-52 | -1.69E-46 |
| MS.gene051265 | MS.gene45918 | 0.829227 | 5.79E-55 | -1.69E-46 |
| MS.gene051279 | MS.gene45918 | 0.809683 | 1.68E-50 | -1.69E-46 |
| MS.gene051328 | MS.gene45918 | 0.802739 | 4.86E-49 | -1.69E-46 |
| MS.gene051388 | MS.gene45918 | 0.817776 | 2.77E-52 | -1.69E-46 |
| MS.gene05157 | MS.gene45918 | 0.842752 | 2.13E-58 | -1.69E-46 |
| MS.gene051719 | MS.gene45918 | 0.838792 | 2.33E-57 | -1.69E-46 |
| MS.gene051720 | MS.gene45918 | 0.82904 | 6.43E-55 | -1.69E-46 |
| MS.gene051744 | MS.gene45918 | 0.830486 | 2.86E-55 | -1.69E-46 |
| MS.gene051800 | MS.gene45918 | 0.812317 | 4.51E-51 | -1.69E-46 |
| MS.gene052012 | MS.gene45918 | 0.809575 | 1.77E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene45918 | 0.853769 | 1.92E-61 | -1.69E-46 |
| MS.gene05215 | MS.gene45918 | 0.805734 | 1.16E-49 | -1.69E-46 |
| MS.gene052190 | MS.gene45918 | 0.81877 | 1.65E-52 | -1.69E-46 |
| MS.gene052323 | MS.gene45918 | 0.836115 | 1.13E-56 | -1.69E-46 |
| MS.gene052516 | MS.gene45918 | 0.853528 | 2.25E-61 | -1.69E-46 |
| MS.gene052519 | MS.gene45918 | 0.821394 | 4.13E-53 | -1.69E-46 |
| MS.gene052582 | MS.gene45918 | 0.804936 | 1.70E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene45918 | 0.80254 | 5.35E-49 | -1.69E-46 |
| MS.gene052611 | MS.gene45918 | 0.878151 | 3.54E-69 | -1.69E-46 |
| MS.gene052612 | MS.gene45918 | 0.835768 | 1.38E-56 | -1.69E-46 |
| MS.gene052665 | MS.gene45918 | 0.849446 | 3.22E-60 | -1.69E-46 |
| MS.gene052773 | MS.gene45918 | 0.822174 | 2.73E-53 | -1.69E-46 |
| MS.gene052863 | MS.gene45918 | 0.855734 | 5.17E-62 | -1.69E-46 |
| MS.gene052896 | MS.gene45918 | 0.850573 | 1.56E-60 | -1.69E-46 |
| MS.gene053008 | MS.gene45918 | 0.833335 | 5.66E-56 | -1.69E-46 |
| MS.gene053079 | MS.gene45918 | 0.801953 | 7.06E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene45918 | 0.80193 | 7.14E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene45918 | 0.81181 | 5.81E-51 | -1.69E-46 |
| MS.gene053221 | MS.gene45918 | 0.840723 | 7.32E-58 | -1.69E-46 |
| MS.gene053226 | MS.gene45918 | 0.844333 | 8.07E-59 | -1.69E-46 |
| MS.gene053565 | MS.gene45918 | 0.836958 | 6.90E-57 | -1.69E-46 |
| MS.gene053621 | MS.gene45918 | 0.801411 | 9.12E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene45918 | 0.816189 | 6.29E-52 | -1.69E-46 |
| MS.gene053894 | MS.gene45918 | 0.800101 | 1.69E-48 | -1.69E-46 |
| MS.gene053966 | MS.gene45918 | 0.816688 | 4.86E-52 | -1.69E-46 |
| MS.gene054139 | MS.gene45918 | 0.801204 | 1.01E-48 | -1.69E-46 |
| MS.gene054236 | MS.gene45918 | 0.807779 | 4.28E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene45918 | 0.829172 | 5.97E-55 | -1.69E-46 |
| MS.gene054468 | MS.gene45918 | 0.812686 | 3.74E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene45918 | 0.818987 | 1.47E-52 | -1.69E-46 |
| MS.gene05447 | MS.gene45918 | 0.809433 | 1.90E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene45918 | 0.80841 | 3.14E-50 | -1.69E-46 |
| MS.gene05462 | MS.gene45918 | 0.810017 | 1.42E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene45918 | 0.841594 | 4.32E-58 | -1.69E-46 |
| MS.gene054775 | MS.gene45918 | 0.834941 | 2.24E-56 | -1.69E-46 |
| MS.gene054801 | MS.gene45918 | 0.817051 | 4.03E-52 | -1.69E-46 |
| MS.gene055227 | MS.gene45918 | 0.846231 | 2.47E-59 | -1.69E-46 |
| MS.gene055228 | MS.gene45918 | 0.812351 | 4.43E-51 | -1.69E-46 |
| MS.gene055356 | MS.gene45918 | 0.8427 | 2.20E-58 | -1.69E-46 |
| MS.gene055357 | MS.gene45918 | 0.836605 | 8.49E-57 | -1.69E-46 |
| MS.gene055358 | MS.gene45918 | 0.839665 | 1.38E-57 | -1.69E-46 |
| MS.gene055465 | MS.gene45918 | 0.837839 | 4.10E-57 | -1.69E-46 |
| MS.gene055466 | MS.gene45918 | 0.858635 | 7.20E-63 | -1.69E-46 |
| MS.gene055468 | MS.gene45918 | 0.839053 | 1.99E-57 | -1.69E-46 |
| MS.gene055512 | MS.gene45918 | 0.843184 | 1.64E-58 | -1.69E-46 |
| MS.gene055608 | MS.gene45918 | 0.82622 | 3.06E-54 | -1.69E-46 |
| MS.gene055623 | MS.gene45918 | 0.805412 | 1.35E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene45918 | 0.815716 | 8.02E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene45918 | 0.856341 | 3.43E-62 | -1.69E-46 |
| MS.gene055890 | MS.gene45918 | 0.809367 | 1.96E-50 | -1.69E-46 |
| MS.gene055926 | MS.gene45918 | 0.8377 | 4.45E-57 | -1.69E-46 |
| MS.gene05604 | MS.gene45918 | 0.838027 | 3.67E-57 | -1.69E-46 |
| MS.gene056050 | MS.gene45918 | 0.816426 | 5.56E-52 | -1.69E-46 |
| MS.gene056173 | MS.gene45918 | 0.830838 | 2.34E-55 | -1.69E-46 |
| MS.gene056174 | MS.gene45918 | 0.804101 | 2.54E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene45918 | 0.833286 | 5.82E-56 | -1.69E-46 |
| MS.gene056366 | MS.gene45918 | 0.847057 | 1.47E-59 | -1.69E-46 |
| MS.gene056498 | MS.gene45918 | 0.805861 | 1.09E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene45918 | 0.807713 | 4.42E-50 | -1.69E-46 |
| MS.gene056542 | MS.gene45918 | 0.805638 | 1.21E-49 | -1.69E-46 |
| MS.gene056543 | MS.gene45918 | 0.809761 | 1.61E-50 | -1.69E-46 |
| MS.gene056545 | MS.gene45918 | 0.809718 | 1.65E-50 | -1.69E-46 |
| MS.gene056553 | MS.gene45918 | 0.874164 | 8.36E-68 | -1.69E-46 |
| MS.gene056595 | MS.gene45918 | 0.800013 | 1.76E-48 | -1.69E-46 |
| MS.gene056643 | MS.gene45918 | 0.803005 | 4.29E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene45918 | 0.802556 | 5.30E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene45918 | 0.822357 | 2.47E-53 | -1.69E-46 |
| MS.gene057200 | MS.gene45918 | 0.808855 | 2.52E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene45918 | 0.842196 | 3.00E-58 | -1.69E-46 |
| MS.gene057693 | MS.gene45918 | 0.837928 | 3.89E-57 | -1.69E-46 |
| MS.gene057869 | MS.gene45918 | 0.819487 | 1.13E-52 | -1.69E-46 |
| MS.gene057915 | MS.gene45918 | 0.833134 | 6.35E-56 | -1.69E-46 |
| MS.gene058010 | MS.gene45918 | 0.830746 | 2.47E-55 | -1.69E-46 |
| MS.gene058168 | MS.gene45918 | 0.810661 | 1.03E-50 | -1.69E-46 |
| MS.gene05847 | MS.gene45918 | 0.822168 | 2.74E-53 | -1.69E-46 |
| MS.gene058625 | MS.gene45918 | 0.84034 | 9.23E-58 | -1.69E-46 |
| MS.gene058636 | MS.gene45918 | 0.820323 | 7.29E-53 | -1.69E-46 |
| MS.gene058829 | MS.gene45918 | 0.848768 | 4.97E-60 | -1.69E-46 |
| MS.gene058979 | MS.gene45918 | 0.833973 | 3.92E-56 | -1.69E-46 |
| MS.gene059570 | MS.gene45918 | 0.806405 | 8.36E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene45918 | 0.819275 | 1.26E-52 | -1.69E-46 |
| MS.gene059725 | MS.gene45918 | 0.843778 | 1.14E-58 | -1.69E-46 |
| MS.gene05978 | MS.gene45918 | 0.803902 | 2.79E-49 | -1.69E-46 |
| MS.gene059789 | MS.gene45918 | 0.810188 | 1.30E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene45918 | 0.846137 | 2.62E-59 | -1.69E-46 |
| MS.gene059937 | MS.gene45918 | 0.835124 | 2.01E-56 | -1.69E-46 |
| MS.gene060137 | MS.gene45918 | -0.831243 | 1.86E-55 | -1.69E-46 |
| MS.gene060310 | MS.gene45918 | 0.818265 | 2.15E-52 | -1.69E-46 |
| MS.gene060322 | MS.gene45918 | 0.863943 | 1.73E-64 | -1.69E-46 |
| MS.gene060355 | MS.gene45918 | 0.805979 | 1.03E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene45918 | 0.811113 | 8.24E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene45918 | 0.850886 | 1.27E-60 | -1.69E-46 |
| MS.gene060637 | MS.gene45918 | 0.811679 | 6.20E-51 | -1.69E-46 |
| MS.gene060683 | MS.gene45918 | 0.810373 | 1.19E-50 | -1.69E-46 |
| MS.gene060685 | MS.gene45918 | 0.813428 | 2.57E-51 | -1.69E-46 |
| MS.gene060802 | MS.gene45918 | 0.805528 | 1.28E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene45918 | 0.838134 | 3.44E-57 | -1.69E-46 |
| MS.gene060918 | MS.gene45918 | 0.8194 | 1.18E-52 | -1.69E-46 |
| MS.gene060998 | MS.gene45918 | 0.815382 | 9.51E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45918.t1 | MTR_7g067080 | 96.743 | 307 | 10 | 0 | 1 | 307 | 7 | 313 | 0.0 | 619 |
| MS.gene45918.t1 | MTR_5g069710 | 58.360 | 317 | 107 | 9 | 1 | 306 | 1 | 303 | 6.17e-114 | 332 |
| MS.gene45918.t1 | MTR_3g462790 | 53.681 | 326 | 112 | 12 | 5 | 305 | 5 | 316 | 5.96e-104 | 306 |
| MS.gene45918.t1 | MTR_5g081860 | 62.981 | 208 | 68 | 2 | 5 | 210 | 3 | 203 | 3.96e-88 | 265 |
| MS.gene45918.t1 | MTR_1g111830 | 50.549 | 182 | 73 | 4 | 27 | 202 | 22 | 192 | 3.29e-54 | 177 |
| MS.gene45918.t1 | MTR_4g111975 | 37.857 | 280 | 131 | 7 | 24 | 272 | 3 | 270 | 4.13e-51 | 171 |
| MS.gene45918.t1 | MTR_8g063600 | 48.023 | 177 | 79 | 3 | 28 | 201 | 9 | 175 | 2.92e-46 | 158 |
| MS.gene45918.t1 | MTR_8g063870 | 37.805 | 246 | 126 | 7 | 27 | 269 | 6 | 227 | 5.80e-39 | 138 |
| MS.gene45918.t1 | MTR_4g015130 | 69.412 | 85 | 24 | 1 | 143 | 227 | 2 | 84 | 1.73e-33 | 118 |
| MS.gene45918.t1 | MTR_6g092540 | 78.873 | 71 | 15 | 0 | 128 | 198 | 91 | 161 | 5.97e-33 | 123 |
| MS.gene45918.t1 | MTR_4g100630 | 66.667 | 81 | 27 | 0 | 126 | 206 | 87 | 167 | 6.72e-31 | 118 |
| MS.gene45918.t1 | MTR_2g100930 | 74.648 | 71 | 18 | 0 | 129 | 199 | 104 | 174 | 7.37e-31 | 119 |
| MS.gene45918.t1 | MTR_8g101650 | 76.056 | 71 | 16 | 1 | 128 | 198 | 99 | 168 | 2.16e-30 | 116 |
| MS.gene45918.t1 | MTR_5g037080 | 67.949 | 78 | 25 | 0 | 128 | 205 | 96 | 173 | 2.54e-27 | 108 |
| MS.gene45918.t1 | MTR_4g107230 | 66.667 | 78 | 26 | 0 | 122 | 199 | 72 | 149 | 2.18e-25 | 103 |
| MS.gene45918.t1 | MTR_3g104370 | 48.718 | 117 | 53 | 3 | 92 | 208 | 54 | 163 | 8.59e-25 | 100 |
| MS.gene45918.t1 | MTR_5g075790 | 33.854 | 192 | 109 | 5 | 28 | 217 | 21 | 196 | 1.65e-24 | 99.4 |
| MS.gene45918.t1 | MTR_5g075760 | 34.872 | 195 | 104 | 7 | 28 | 217 | 12 | 188 | 1.21e-23 | 96.7 |
| MS.gene45918.t1 | MTR_0036s0260 | 47.000 | 100 | 53 | 0 | 134 | 233 | 28 | 127 | 6.66e-23 | 94.4 |
| MS.gene45918.t1 | MTR_1g033620 | 76.667 | 60 | 14 | 0 | 150 | 209 | 21 | 80 | 1.06e-22 | 94.7 |
| MS.gene45918.t1 | MTR_5g088010 | 53.086 | 81 | 35 | 1 | 123 | 200 | 49 | 129 | 1.36e-22 | 94.7 |
| MS.gene45918.t1 | MTR_2g090305 | 62.121 | 66 | 25 | 0 | 134 | 199 | 28 | 93 | 7.46e-22 | 91.3 |
| MS.gene45918.t1 | MTR_1g033600 | 39.098 | 133 | 70 | 3 | 24 | 148 | 7 | 136 | 8.57e-22 | 89.7 |
| MS.gene45918.t1 | MTR_5g088060 | 61.765 | 68 | 23 | 1 | 136 | 200 | 274 | 341 | 8.77e-21 | 92.4 |
| MS.gene45918.t1 | MTR_5g488160 | 61.765 | 68 | 23 | 1 | 136 | 200 | 274 | 341 | 8.77e-21 | 92.4 |
| MS.gene45918.t1 | MTR_5g027570 | 57.534 | 73 | 29 | 1 | 130 | 200 | 88 | 160 | 1.02e-20 | 89.4 |
| MS.gene45918.t1 | MTR_5g027550 | 57.895 | 76 | 29 | 1 | 130 | 202 | 73 | 148 | 9.51e-20 | 86.3 |
| MS.gene45918.t1 | MTR_3g111880 | 51.282 | 78 | 35 | 1 | 27 | 101 | 5 | 82 | 4.46e-19 | 80.9 |
| MS.gene45918.t1 | MTR_1g022290 | 50.000 | 72 | 36 | 0 | 24 | 95 | 2 | 73 | 8.92e-19 | 80.1 |
| MS.gene45918.t1 | MTR_5g020170 | 48.000 | 75 | 39 | 0 | 17 | 91 | 7 | 81 | 2.38e-18 | 79.0 |
| MS.gene45918.t1 | MTR_1g048660 | 46.835 | 79 | 42 | 0 | 135 | 213 | 13 | 91 | 2.99e-18 | 78.6 |
| MS.gene45918.t1 | MTR_3g116720 | 51.471 | 68 | 33 | 0 | 27 | 94 | 14 | 81 | 1.26e-17 | 76.6 |
| MS.gene45918.t1 | MTR_8g077360 | 51.429 | 70 | 33 | 1 | 26 | 95 | 2 | 70 | 4.44e-17 | 74.7 |
| MS.gene45918.t1 | MTR_8g077380 | 51.429 | 70 | 33 | 1 | 26 | 95 | 2 | 70 | 5.09e-17 | 74.7 |
| MS.gene45918.t1 | MTR_8g077390 | 51.429 | 70 | 33 | 1 | 26 | 95 | 2 | 70 | 5.09e-17 | 74.7 |
| MS.gene45918.t1 | MTR_6g004250 | 44.928 | 69 | 38 | 0 | 24 | 92 | 5 | 73 | 1.10e-15 | 71.2 |
| MS.gene45918.t1 | MTR_8g077420 | 48.571 | 70 | 35 | 1 | 26 | 95 | 2 | 70 | 1.75e-14 | 67.8 |
| MS.gene45918.t1 | MTR_3g013440 | 44.706 | 85 | 37 | 2 | 29 | 112 | 10 | 85 | 1.89e-14 | 68.2 |
| MS.gene45918.t1 | MTR_7g089210 | 53.846 | 65 | 30 | 0 | 33 | 97 | 16 | 80 | 3.08e-14 | 67.4 |
| MS.gene45918.t1 | MTR_5g020540 | 50.794 | 63 | 30 | 1 | 27 | 89 | 2 | 63 | 8.12e-14 | 65.5 |
| MS.gene45918.t1 | MTR_3g070110 | 48.000 | 75 | 32 | 1 | 136 | 203 | 97 | 171 | 2.67e-13 | 68.2 |
| MS.gene45918.t1 | MTR_1g083180 | 52.113 | 71 | 29 | 2 | 136 | 202 | 63 | 132 | 6.13e-13 | 66.6 |
| MS.gene45918.t1 | MTR_8g072990 | 44.068 | 59 | 33 | 0 | 122 | 180 | 88 | 146 | 7.01e-11 | 61.6 |
| MS.gene45918.t1 | MTR_6g043490 | 44.828 | 58 | 32 | 0 | 123 | 180 | 96 | 153 | 7.25e-11 | 61.6 |
| MS.gene45918.t1 | MTR_6g043480 | 44.828 | 58 | 32 | 0 | 123 | 180 | 96 | 153 | 7.39e-11 | 61.6 |
| MS.gene45918.t1 | MTR_3g111920 | 44.444 | 63 | 35 | 0 | 29 | 91 | 3 | 65 | 9.16e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45918.t1 | AT2G38090 | 74.178 | 213 | 48 | 2 | 1 | 206 | 1 | 213 | 6.17e-117 | 339 |
| MS.gene45918.t1 | AT5G58900 | 64.651 | 215 | 59 | 5 | 5 | 205 | 1 | 212 | 1.88e-91 | 274 |
| MS.gene45918.t1 | AT5G01200 | 59.361 | 219 | 64 | 6 | 1 | 203 | 6 | 215 | 1.97e-81 | 247 |
| MS.gene45918.t1 | AT3G11280 | 58.937 | 207 | 66 | 4 | 5 | 203 | 1 | 196 | 5.63e-76 | 233 |
| MS.gene45918.t1 | AT3G11280 | 58.937 | 207 | 66 | 4 | 5 | 203 | 1 | 196 | 5.63e-76 | 233 |
| MS.gene45918.t1 | AT5G05790 | 57.971 | 207 | 70 | 5 | 27 | 230 | 29 | 221 | 1.00e-72 | 226 |
| MS.gene45918.t1 | AT5G05790 | 57.971 | 207 | 70 | 5 | 27 | 230 | 29 | 221 | 1.00e-72 | 226 |
| MS.gene45918.t1 | AT5G08520 | 50.267 | 187 | 92 | 1 | 24 | 209 | 7 | 193 | 5.50e-55 | 181 |
| MS.gene45918.t1 | AT1G49010 | 48.500 | 200 | 80 | 4 | 27 | 204 | 6 | 204 | 4.09e-50 | 169 |
| MS.gene45918.t1 | AT5G04760 | 47.568 | 185 | 85 | 3 | 27 | 211 | 4 | 176 | 3.27e-49 | 163 |
| MS.gene45918.t1 | AT5G23650 | 45.304 | 181 | 91 | 2 | 26 | 201 | 10 | 187 | 2.62e-45 | 157 |
| MS.gene45918.t1 | AT3G10580 | 38.503 | 187 | 93 | 5 | 29 | 214 | 8 | 173 | 2.06e-32 | 120 |
| MS.gene45918.t1 | AT3G10580 | 38.503 | 187 | 93 | 5 | 29 | 214 | 8 | 173 | 3.73e-32 | 121 |
| MS.gene45918.t1 | AT5G47390 | 76.712 | 73 | 17 | 0 | 126 | 198 | 88 | 160 | 1.06e-31 | 121 |
| MS.gene45918.t1 | AT5G61620 | 56.436 | 101 | 37 | 1 | 105 | 205 | 86 | 179 | 8.53e-29 | 112 |
| MS.gene45918.t1 | AT4G09450 | 39.655 | 174 | 82 | 4 | 28 | 200 | 6 | 157 | 3.60e-28 | 108 |
| MS.gene45918.t1 | AT5G56840 | 59.551 | 89 | 34 | 2 | 129 | 215 | 86 | 174 | 7.90e-28 | 108 |
| MS.gene45918.t1 | AT1G70000 | 72.222 | 72 | 20 | 0 | 128 | 199 | 92 | 163 | 1.56e-26 | 105 |
| MS.gene45918.t1 | AT1G70000 | 72.222 | 72 | 20 | 0 | 128 | 199 | 92 | 163 | 1.56e-26 | 105 |
| MS.gene45918.t1 | AT3G16350 | 84.906 | 53 | 8 | 0 | 129 | 181 | 132 | 184 | 2.35e-25 | 104 |
| MS.gene45918.t1 | AT1G19000 | 64.474 | 76 | 27 | 0 | 130 | 205 | 98 | 173 | 1.29e-23 | 98.2 |
| MS.gene45918.t1 | AT1G19000 | 64.474 | 76 | 27 | 0 | 130 | 205 | 98 | 173 | 1.29e-23 | 98.2 |
| MS.gene45918.t1 | AT1G74840 | 80.769 | 52 | 10 | 0 | 129 | 180 | 91 | 142 | 1.74e-23 | 97.1 |
| MS.gene45918.t1 | AT1G74840 | 80.769 | 52 | 10 | 0 | 129 | 180 | 91 | 142 | 2.38e-23 | 97.1 |
| MS.gene45918.t1 | AT3G10590 | 35.714 | 196 | 117 | 7 | 28 | 220 | 6 | 195 | 2.66e-21 | 90.1 |
| MS.gene45918.t1 | AT1G75250 | 55.224 | 67 | 30 | 0 | 27 | 93 | 10 | 76 | 1.25e-18 | 79.7 |
| MS.gene45918.t1 | AT1G75250 | 55.224 | 67 | 30 | 0 | 27 | 93 | 10 | 76 | 2.78e-18 | 79.7 |
| MS.gene45918.t1 | AT4G39250 | 50.000 | 66 | 33 | 0 | 29 | 94 | 14 | 79 | 2.41e-16 | 73.6 |
| MS.gene45918.t1 | AT2G21650 | 49.254 | 67 | 34 | 0 | 29 | 95 | 14 | 80 | 4.81e-15 | 70.1 |
| MS.gene45918.t1 | AT1G19510 | 45.455 | 77 | 39 | 1 | 33 | 109 | 16 | 89 | 7.12e-14 | 67.0 |
| MS.gene45918.t1 | AT2G18328 | 46.032 | 63 | 34 | 0 | 33 | 95 | 15 | 77 | 8.98e-12 | 60.5 |
Find 71 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAACAACCAATTGGAATTT+TGG | 0.118121 | 7.2:-45678499 | None:intergenic |
| ACGAAGGCGGTTTCGTTTCT+TGG | 0.182523 | 7.2:-45679828 | None:intergenic |
| TATTTCATTAGGCAGCTTTC+AGG | 0.241192 | 7.2:+45679754 | MS.gene45918:CDS |
| AAGAAAACAATGGTTCAAAA+TGG | 0.270050 | 7.2:+45678522 | MS.gene45918:CDS |
| AGGGTTGCTGAGATGATTCC+TGG | 0.340116 | 7.2:+45678617 | MS.gene45918:CDS |
| TCCTTCTTCTCTGGACCATT+TGG | 0.345458 | 7.2:+45679864 | MS.gene45918:CDS |
| TGCTTTAGCTTATTATGATA+AGG | 0.378761 | 7.2:+45678574 | MS.gene45918:CDS |
| ATGCTCAGAAGTATTTCATT+AGG | 0.387800 | 7.2:+45679743 | MS.gene45918:CDS |
| TTAGTTGAATTGAAAACAAA+TGG | 0.411456 | 7.2:-45679973 | None:intergenic |
| AAAAGTATGGCAAGGGAGAC+TGG | 0.414734 | 7.2:+45679665 | MS.gene45918:CDS |
| CCTATATCCAAAATTCCAAT+TGG | 0.417676 | 7.2:+45678492 | MS.gene45918:CDS |
| TGATGTGATTAAACAGTATA+GGG | 0.417708 | 7.2:+45678652 | MS.gene45918:CDS |
| GCTGGTTTGATACCAGTTCC+TGG | 0.417898 | 7.2:+45678704 | MS.gene45918:CDS |
| TAGTATCAAAAGGTGAAAAC+TGG | 0.419071 | 7.2:-45680089 | None:intergenic |
| GCAACCCTTATCCATCTATC+AGG | 0.422928 | 7.2:-45678602 | None:intergenic |
| TTCTCTGGACCATTTGGTGA+AGG | 0.432138 | 7.2:+45679870 | MS.gene45918:CDS |
| ATAAGGATACTCCTGATAGA+TGG | 0.435285 | 7.2:+45678591 | MS.gene45918:CDS |
| TTCGACTCGGCCGTCGGAGC+AGG | 0.442415 | 7.2:+45678820 | MS.gene45918:CDS |
| AAGTAACGATCCTTCTTCTC+TGG | 0.444961 | 7.2:+45679855 | MS.gene45918:CDS |
| ACAAATGGCATGCCTTCATC+TGG | 0.446288 | 7.2:-45679958 | None:intergenic |
| TTTGTCCAGCATGGTTAAGC+AGG | 0.451543 | 7.2:+45679918 | MS.gene45918:CDS |
| TTTCAGGAGGGAAGGATAAG+AGG | 0.455606 | 7.2:+45679770 | MS.gene45918:CDS |
| GATGTGTGTGTTATTGAAGC+TGG | 0.457311 | 7.2:+45678686 | MS.gene45918:CDS |
| AATGGTTCAAAATGGACTTC+AGG | 0.473941 | 7.2:+45678530 | MS.gene45918:CDS |
| ATACTCCTGATAGATGGATA+AGG | 0.478456 | 7.2:+45678597 | MS.gene45918:CDS |
| GATTTGCAACCTTCACCAAA+TGG | 0.478639 | 7.2:-45679879 | None:intergenic |
| GTGATGTGATTAAACAGTAT+AGG | 0.483162 | 7.2:+45678651 | MS.gene45918:CDS |
| GACTGGAAATTACCAGATGA+AGG | 0.483800 | 7.2:+45679946 | MS.gene45918:CDS |
| TACTCCTGATAGATGGATAA+GGG | 0.485001 | 7.2:+45678598 | MS.gene45918:CDS |
| ACCAAATGGTCCAGAGAAGA+AGG | 0.487953 | 7.2:-45679865 | None:intergenic |
| TTCTTCCTTTCCTGCTCCGA+CGG | 0.488987 | 7.2:-45678830 | None:intergenic |
| CTAGTTGTATAACCAGGAAC+TGG | 0.504989 | 7.2:-45678716 | None:intergenic |
| ATTTGCAAAATAGTATCAAA+AGG | 0.512642 | 7.2:-45680099 | None:intergenic |
| CTCGGCCGTCGGAGCAGGAA+AGG | 0.514515 | 7.2:+45678825 | MS.gene45918:CDS |
| CTATGCTCCTCTTCAGTCCA+TGG | 0.515244 | 7.2:-45678860 | None:intergenic |
| TTCACAAGAATCGAAATCAC+CGG | 0.522859 | 7.2:+45680032 | MS.gene45918:CDS |
| AGTGTTGGTGGGAAAAGAAA+TGG | 0.524651 | 7.2:+45678797 | MS.gene45918:CDS |
| GATTGACCACTGTGATATCA+TGG | 0.524764 | 7.2:-45679804 | None:intergenic |
| AACTAAAGGAAACATGTTTG+TGG | 0.525249 | 7.2:+45679990 | MS.gene45918:CDS |
| TGGTTAAGCAGGAATTTGAC+TGG | 0.530767 | 7.2:+45679929 | MS.gene45918:CDS |
| GGTATCCATGATGAGTGCTT+CGG | 0.532341 | 7.2:-45680068 | None:intergenic |
| AAATTCCTGCTTAACCATGC+TGG | 0.533010 | 7.2:-45679923 | None:intergenic |
| GCATGACTTGCGACTTGAGT+TGG | 0.545637 | 7.2:-45679724 | None:intergenic |
| GAATCATAATTTGTCCAGCA+TGG | 0.552113 | 7.2:+45679909 | MS.gene45918:CDS |
| TTCATTAGGCAGCTTTCAGG+AGG | 0.562103 | 7.2:+45679757 | MS.gene45918:CDS |
| ATGTTTGTGGCACCGTCGTG+CGG | 0.567658 | 7.2:+45680003 | MS.gene45918:CDS |
| TCACAAGAATCGAAATCACC+GGG | 0.573301 | 7.2:+45680033 | MS.gene45918:CDS |
| TGTTTGTGGCACCGTCGTGC+GGG | 0.575136 | 7.2:+45680004 | MS.gene45918:CDS |
| TTATCTAGAACAATGAATAG+AGG | 0.579227 | 7.2:+45678446 | None:intergenic |
| GAGACTGGAGAAACATCTCT+AGG | 0.579618 | 7.2:+45679680 | MS.gene45918:CDS |
| TAGGCAGCTTTCAGGAGGGA+AGG | 0.581740 | 7.2:+45679762 | MS.gene45918:CDS |
| TCGGAGCAGGAAAGGAAGAA+AGG | 0.584815 | 7.2:+45678833 | MS.gene45918:CDS |
| GTACTCCGAAGCACTCATCA+TGG | 0.587369 | 7.2:+45680063 | MS.gene45918:CDS |
| AAATGGTTCGACTCGGCCGT+CGG | 0.594573 | 7.2:+45678814 | MS.gene45918:CDS |
| GACTTGAGTTGGTGTTCTTG+TGG | 0.595027 | 7.2:-45679713 | None:intergenic |
| TTGGATTGGGATAACAGTGA+AGG | 0.598870 | 7.2:+45678749 | MS.gene45918:CDS |
| TCGTTACTTTCTGACGAAGG+CGG | 0.604880 | 7.2:-45679841 | None:intergenic |
| AAAGGAAGAAAGGTGTGCCA+TGG | 0.605391 | 7.2:+45678843 | MS.gene45918:CDS |
| CATGGACTGAAGAGGAGCAT+AGG | 0.606328 | 7.2:+45678861 | MS.gene45918:CDS |
| TGGATTGGGATAACAGTGAA+GGG | 0.609140 | 7.2:+45678750 | MS.gene45918:CDS |
| AGGTGTGCCATGGACTGAAG+AGG | 0.618331 | 7.2:+45678853 | MS.gene45918:CDS |
| CTGGACAAATTATGATTCTG+TGG | 0.628813 | 7.2:-45679904 | None:intergenic |
| AAAGAGCTAGTTGTATAACC+AGG | 0.644968 | 7.2:-45678722 | None:intergenic |
| GGATCGTTACTTTCTGACGA+AGG | 0.646642 | 7.2:-45679844 | None:intergenic |
| TCATTAGGCAGCTTTCAGGA+GGG | 0.651718 | 7.2:+45679758 | MS.gene45918:CDS |
| CTTCGGAGTACATTACGCCC+CGG | 0.658628 | 7.2:-45680051 | None:intergenic |
| TGGTTGTTTCAAGAAAACAA+TGG | 0.668637 | 7.2:+45678512 | MS.gene45918:CDS |
| GGAAAAGAAATGGTTCGACT+CGG | 0.671112 | 7.2:+45678807 | MS.gene45918:CDS |
| TGTGAAGAAATCCCGCACGA+CGG | 0.712958 | 7.2:-45680015 | None:intergenic |
| CACAAGAATCGAAATCACCG+GGG | 0.784252 | 7.2:+45680034 | MS.gene45918:CDS |
| AAGTATCCATGATATCACAG+TGG | 0.791298 | 7.2:+45679798 | MS.gene45918:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAGTTAGTGAAATTAT+AGG | + | chr7.2:45678976-45678995 | MS.gene45918:intron | 15.0% |
| !! | ATTTGCAAAATAGTATCAAA+AGG | - | chr7.2:45680102-45680121 | None:intergenic | 20.0% |
| !! | TATGGTTGATTAACATAAAA+AGG | - | chr7.2:45679624-45679643 | None:intergenic | 20.0% |
| !! | TTAGTTGAATTGAAAACAAA+TGG | - | chr7.2:45679976-45679995 | None:intergenic | 20.0% |
| !!! | CCATTTTCTAACATTATTAA+CGG | - | chr7.2:45679397-45679416 | None:intergenic | 20.0% |
| !!! | TTTGTTTTCAATTCAACTAA+AGG | + | chr7.2:45679976-45679995 | MS.gene45918:CDS | 20.0% |
| !!! | TTTTTATGTTAATCAACCAT+AGG | + | chr7.2:45679623-45679642 | MS.gene45918:intron | 20.0% |
| ! | AAAAACCTTCAATCATTCTA+GGG | - | chr7.2:45679121-45679140 | None:intergenic | 25.0% |
| ! | AAGAAAACAATGGTTCAAAA+TGG | + | chr7.2:45678522-45678541 | MS.gene45918:CDS | 25.0% |
| ! | AATGATTCCATAGTGTAAAT+CGG | + | chr7.2:45679158-45679177 | MS.gene45918:intron | 25.0% |
| ! | ACTATGGAATCATTCTAATA+TGG | - | chr7.2:45679152-45679171 | None:intergenic | 25.0% |
| ! | ACTTAACCAAAGAACTAATA+TGG | - | chr7.2:45679069-45679088 | None:intergenic | 25.0% |
| ! | CCGTTAATAATGTTAGAAAA+TGG | + | chr7.2:45679394-45679413 | MS.gene45918:intron | 25.0% |
| ! | GGGTTACATAGATTATTATA+TGG | + | chr7.2:45679499-45679518 | MS.gene45918:intron | 25.0% |
| ! | TAAAAACCTTCAATCATTCT+AGG | - | chr7.2:45679122-45679141 | None:intergenic | 25.0% |
| ! | TATAATAATCTATGTAACCC+CGG | - | chr7.2:45679499-45679518 | None:intergenic | 25.0% |
| ! | TGATGTGATTAAACAGTATA+GGG | + | chr7.2:45678652-45678671 | MS.gene45918:CDS | 25.0% |
| ! | TTAGTGAAATTATAGGTGTT+AGG | + | chr7.2:45678983-45679002 | MS.gene45918:intron | 25.0% |
| ! | TTGATAAATGCTTTACTTGT+TGG | + | chr7.2:45679529-45679548 | MS.gene45918:intron | 25.0% |
| !! | AACAAGTAAAGCATTTATCA+AGG | - | chr7.2:45679530-45679549 | None:intergenic | 25.0% |
| !! | AATTTTGTGCTTGAAATGAA+TGG | + | chr7.2:45679007-45679026 | MS.gene45918:intron | 25.0% |
| !! | TGCTTTAGCTTATTATGATA+AGG | + | chr7.2:45678574-45678593 | MS.gene45918:CDS | 25.0% |
| !!! | GTTTTTGTGCTTTGAAATTA+TGG | + | chr7.2:45679282-45679301 | MS.gene45918:intron | 25.0% |
| AACTAAAGGAAACATGTTTG+TGG | + | chr7.2:45679990-45680009 | MS.gene45918:CDS | 30.0% | |
| ATCGATGATTTGAATAATCG+AGG | + | chr7.2:45679196-45679215 | MS.gene45918:intron | 30.0% | |
| ATGATTTGAATAATCGAGGA+AGG | + | chr7.2:45679200-45679219 | MS.gene45918:intron | 30.0% | |
| CCTATATCCAAAATTCCAAT+TGG | + | chr7.2:45678492-45678511 | MS.gene45918:CDS | 30.0% | |
| GTGATGTGATTAAACAGTAT+AGG | + | chr7.2:45678651-45678670 | MS.gene45918:CDS | 30.0% | |
| TAGTATCAAAAGGTGAAAAC+TGG | - | chr7.2:45680092-45680111 | None:intergenic | 30.0% | |
| TGTTTGAGCGATTATAAATC+AGG | + | chr7.2:45679324-45679343 | MS.gene45918:intron | 30.0% | |
| TTGAATGTAACTACACGTTT+CGG | + | chr7.2:45679420-45679439 | MS.gene45918:intron | 30.0% | |
| ! | AACCATAGGCAATTTTTGTT+GGG | + | chr7.2:45679637-45679656 | MS.gene45918:intron | 30.0% |
| ! | CCAATTGGAATTTTGGATAT+AGG | - | chr7.2:45678495-45678514 | None:intergenic | 30.0% |
| ! | GAAACAACCAATTGGAATTT+TGG | - | chr7.2:45678502-45678521 | None:intergenic | 30.0% |
| ! | GTTTTCTTGAAACAACCAAT+TGG | - | chr7.2:45678510-45678529 | None:intergenic | 30.0% |
| ! | TAGCTCTTTTACATTGGATT+GGG | + | chr7.2:45678736-45678755 | MS.gene45918:CDS | 30.0% |
| ! | TGGTTGTTTCAAGAAAACAA+TGG | + | chr7.2:45678512-45678531 | MS.gene45918:CDS | 30.0% |
| !! | ATGCTCAGAAGTATTTCATT+AGG | + | chr7.2:45679743-45679762 | MS.gene45918:CDS | 30.0% |
| !! | TACAACTAGCTCTTTTACAT+TGG | + | chr7.2:45678730-45678749 | MS.gene45918:CDS | 30.0% |
| !! | TATCTATGAAGCATTGATAC+TGG | + | chr7.2:45679361-45679380 | MS.gene45918:intron | 30.0% |
| AAAGAGCTAGTTGTATAACC+AGG | - | chr7.2:45678725-45678744 | None:intergenic | 35.0% | |
| AAGTATCCATGATATCACAG+TGG | + | chr7.2:45679798-45679817 | MS.gene45918:CDS | 35.0% | |
| AGAGTCAGATATCAAATGCA+AGG | - | chr7.2:45679557-45679576 | None:intergenic | 35.0% | |
| ATAAGGATACTCCTGATAGA+TGG | + | chr7.2:45678591-45678610 | MS.gene45918:CDS | 35.0% | |
| ATACTCCTGATAGATGGATA+AGG | + | chr7.2:45678597-45678616 | MS.gene45918:CDS | 35.0% | |
| ATGATTCCTGGAAAAACTGT+TGG | + | chr7.2:45678629-45678648 | MS.gene45918:CDS | 35.0% | |
| CTGGACAAATTATGATTCTG+TGG | - | chr7.2:45679907-45679926 | None:intergenic | 35.0% | |
| GAGCATAGGTAATTACGTTT+CGG | + | chr7.2:45678875-45678894 | MS.gene45918:intron | 35.0% | |
| TAAAGCCCTAGAATGATTGA+AGG | + | chr7.2:45679113-45679132 | MS.gene45918:intron | 35.0% | |
| TACTCCTGATAGATGGATAA+GGG | + | chr7.2:45678598-45678617 | MS.gene45918:CDS | 35.0% | |
| TATTTCATTAGGCAGCTTTC+AGG | + | chr7.2:45679754-45679773 | MS.gene45918:CDS | 35.0% | |
| TTCACAAGAATCGAAATCAC+CGG | + | chr7.2:45680032-45680051 | MS.gene45918:CDS | 35.0% | |
| TTGTTGGGTCTGAAAAAGTA+TGG | + | chr7.2:45679652-45679671 | MS.gene45918:CDS | 35.0% | |
| ! | AATGGTTCAAAATGGACTTC+AGG | + | chr7.2:45678530-45678549 | MS.gene45918:CDS | 35.0% |
| ! | CAACCATAGGCAATTTTTGT+TGG | + | chr7.2:45679636-45679655 | MS.gene45918:intron | 35.0% |
| ! | CATCAGCCATATTAGTTCTT+TGG | + | chr7.2:45679060-45679079 | MS.gene45918:intron | 35.0% |
| ! | GAATCATAATTTGTCCAGCA+TGG | + | chr7.2:45679909-45679928 | MS.gene45918:CDS | 35.0% |
| ! | GAATTTTGGATATAGGAAGC+TGG | - | chr7.2:45678488-45678507 | None:intergenic | 35.0% |
| !! | ATCCAGTGTTTTTGCTTCTT+TGG | + | chr7.2:45679581-45679600 | MS.gene45918:intron | 35.0% |
| !! | CTAGCTCTTTTACATTGGAT+TGG | + | chr7.2:45678735-45678754 | MS.gene45918:CDS | 35.0% |
| !! | TGAATCACCGATTTACACTA+TGG | - | chr7.2:45679168-45679187 | None:intergenic | 35.0% |
| !! | TTCAAGCAGTTTTGTAGTGT+TGG | + | chr7.2:45678782-45678801 | MS.gene45918:CDS | 35.0% |
| AAATTCCTGCTTAACCATGC+TGG | - | chr7.2:45679926-45679945 | None:intergenic | 40.0% | |
| AAGTAACGATCCTTCTTCTC+TGG | + | chr7.2:45679855-45679874 | MS.gene45918:CDS | 40.0% | |
| AGCCAAAGAAGCAAAAACAC+TGG | - | chr7.2:45679586-45679605 | None:intergenic | 40.0% | |
| ATCGAGGAAGGAAGAATCAT+TGG | + | chr7.2:45679212-45679231 | MS.gene45918:intron | 40.0% | |
| CTAGTTGTATAACCAGGAAC+TGG | - | chr7.2:45678719-45678738 | None:intergenic | 40.0% | |
| GACCCAACAAAAATTGCCTA+TGG | - | chr7.2:45679642-45679661 | None:intergenic | 40.0% | |
| GACTGGAAATTACCAGATGA+AGG | + | chr7.2:45679946-45679965 | MS.gene45918:CDS | 40.0% | |
| GACTTCAGAGTTTAGACTGA+AGG | - | chr7.2:45679477-45679496 | None:intergenic | 40.0% | |
| GATTGACCACTGTGATATCA+TGG | - | chr7.2:45679807-45679826 | None:intergenic | 40.0% | |
| GATTTGCAACCTTCACCAAA+TGG | - | chr7.2:45679882-45679901 | None:intergenic | 40.0% | |
| GGAAAAGAAATGGTTCGACT+CGG | + | chr7.2:45678807-45678826 | MS.gene45918:CDS | 40.0% | |
| TCACAAGAATCGAAATCACC+GGG | + | chr7.2:45680033-45680052 | MS.gene45918:CDS | 40.0% | |
| TGGTTAAGCAGGAATTTGAC+TGG | + | chr7.2:45679929-45679948 | MS.gene45918:CDS | 40.0% | |
| ! | ACATCACCAACAGTTTTTCC+AGG | - | chr7.2:45678638-45678657 | None:intergenic | 40.0% |
| ! | GATGTGTGTGTTATTGAAGC+TGG | + | chr7.2:45678686-45678705 | MS.gene45918:CDS | 40.0% |
| ! | GGCTGATGATTTTCAACTTC+AGG | - | chr7.2:45679048-45679067 | None:intergenic | 40.0% |
| ! | GGTCTGAAAAAGTATGGCAA+GGG | + | chr7.2:45679658-45679677 | MS.gene45918:CDS | 40.0% |
| ! | TGGATTGGGATAACAGTGAA+GGG | + | chr7.2:45678750-45678769 | MS.gene45918:CDS | 40.0% |
| ! | TTGGATTGGGATAACAGTGA+AGG | + | chr7.2:45678749-45678768 | MS.gene45918:CDS | 40.0% |
| !! | AAGCAGTTTTGTAGTGTTGG+TGG | + | chr7.2:45678785-45678804 | MS.gene45918:CDS | 40.0% |
| !! | AGTGTTGGTGGGAAAAGAAA+TGG | + | chr7.2:45678797-45678816 | MS.gene45918:CDS | 40.0% |
| !! | TCAGTCTAAACTCTGAAGTC+CGG | + | chr7.2:45679477-45679496 | MS.gene45918:intron | 40.0% |
| !!! | AGCAGTTTTGTAGTGTTGGT+GGG | + | chr7.2:45678786-45678805 | MS.gene45918:CDS | 40.0% |
| ACAAATGGCATGCCTTCATC+TGG | - | chr7.2:45679961-45679980 | None:intergenic | 45.0% | |
| ACCAAATGGTCCAGAGAAGA+AGG | - | chr7.2:45679868-45679887 | None:intergenic | 45.0% | |
| CACAAGAATCGAAATCACCG+GGG | + | chr7.2:45680034-45680053 | MS.gene45918:CDS | 45.0% | |
| GAGACTGGAGAAACATCTCT+AGG | + | chr7.2:45679680-45679699 | MS.gene45918:CDS | 45.0% | |
| GCAACCCTTATCCATCTATC+AGG | - | chr7.2:45678605-45678624 | None:intergenic | 45.0% | |
| GGTATCCATGATGAGTGCTT+CGG | - | chr7.2:45680071-45680090 | None:intergenic | 45.0% | |
| TACACGTTTCGGTTTCGTGT+CGG | + | chr7.2:45679431-45679450 | MS.gene45918:intron | 45.0% | |
| TCATTAGGCAGCTTTCAGGA+GGG | + | chr7.2:45679758-45679777 | MS.gene45918:CDS | 45.0% | |
| TCCTTCTTCTCTGGACCATT+TGG | + | chr7.2:45679864-45679883 | MS.gene45918:CDS | 45.0% | |
| TTCATTAGGCAGCTTTCAGG+AGG | + | chr7.2:45679757-45679776 | MS.gene45918:CDS | 45.0% | |
| TTTCAGGAGGGAAGGATAAG+AGG | + | chr7.2:45679770-45679789 | MS.gene45918:CDS | 45.0% | |
| TTTGTCCAGCATGGTTAAGC+AGG | + | chr7.2:45679918-45679937 | MS.gene45918:CDS | 45.0% | |
| ! | AAAAGTATGGCAAGGGAGAC+TGG | + | chr7.2:45679665-45679684 | MS.gene45918:CDS | 45.0% |
| ! | AAAGGAAGAAAGGTGTGCCA+TGG | + | chr7.2:45678843-45678862 | MS.gene45918:CDS | 45.0% |
| ! | GGATCGTTACTTTCTGACGA+AGG | - | chr7.2:45679847-45679866 | None:intergenic | 45.0% |
| ! | GGGTCTGAAAAAGTATGGCA+AGG | + | chr7.2:45679657-45679676 | MS.gene45918:CDS | 45.0% |
| ! | TCGTTACTTTCTGACGAAGG+CGG | - | chr7.2:45679844-45679863 | None:intergenic | 45.0% |
| ! | TTCTCTGGACCATTTGGTGA+AGG | + | chr7.2:45679870-45679889 | MS.gene45918:CDS | 45.0% |
| !! | AGTCTAAACTCTGAAGTCCG+GGG | + | chr7.2:45679479-45679498 | MS.gene45918:intron | 45.0% |
| !! | CAGTCTAAACTCTGAAGTCC+GGG | + | chr7.2:45679478-45679497 | MS.gene45918:intron | 45.0% |
| !! | GACTTGAGTTGGTGTTCTTG+TGG | - | chr7.2:45679716-45679735 | None:intergenic | 45.0% |
| ACGAAGGCGGTTTCGTTTCT+TGG | - | chr7.2:45679831-45679850 | None:intergenic | 50.0% | |
| AGGGTTGCTGAGATGATTCC+TGG | + | chr7.2:45678617-45678636 | MS.gene45918:CDS | 50.0% | |
| CTATGCTCCTCTTCAGTCCA+TGG | - | chr7.2:45678863-45678882 | None:intergenic | 50.0% | |
| TCGGAGCAGGAAAGGAAGAA+AGG | + | chr7.2:45678833-45678852 | MS.gene45918:CDS | 50.0% | |
| TGTGAAGAAATCCCGCACGA+CGG | - | chr7.2:45680018-45680037 | None:intergenic | 50.0% | |
| TTCTTCCTTTCCTGCTCCGA+CGG | - | chr7.2:45678833-45678852 | None:intergenic | 50.0% | |
| ! | CATGGACTGAAGAGGAGCAT+AGG | + | chr7.2:45678861-45678880 | MS.gene45918:CDS | 50.0% |
| ! | GCATGACTTGCGACTTGAGT+TGG | - | chr7.2:45679727-45679746 | None:intergenic | 50.0% |
| ! | GTACTCCGAAGCACTCATCA+TGG | + | chr7.2:45680063-45680082 | MS.gene45918:CDS | 50.0% |
| ! | TTTCGGTTTCGTGTCGGCAT+TGG | + | chr7.2:45679437-45679456 | MS.gene45918:intron | 50.0% |
| !! | GCTGGTTTGATACCAGTTCC+TGG | + | chr7.2:45678704-45678723 | MS.gene45918:CDS | 50.0% |
| ATGTTTGTGGCACCGTCGTG+CGG | + | chr7.2:45680003-45680022 | MS.gene45918:CDS | 55.0% | |
| CTTCGGAGTACATTACGCCC+CGG | - | chr7.2:45680054-45680073 | None:intergenic | 55.0% | |
| TAGGCAGCTTTCAGGAGGGA+AGG | + | chr7.2:45679762-45679781 | MS.gene45918:CDS | 55.0% | |
| ! | AGGTGTGCCATGGACTGAAG+AGG | + | chr7.2:45678853-45678872 | MS.gene45918:CDS | 55.0% |
| !! | AAATGGTTCGACTCGGCCGT+CGG | + | chr7.2:45678814-45678833 | MS.gene45918:CDS | 55.0% |
| TGTTTGTGGCACCGTCGTGC+GGG | + | chr7.2:45680004-45680023 | MS.gene45918:CDS | 60.0% | |
| CTCGGCCGTCGGAGCAGGAA+AGG | + | chr7.2:45678825-45678844 | MS.gene45918:CDS | 70.0% | |
| !! | TTCGACTCGGCCGTCGGAGC+AGG | + | chr7.2:45678820-45678839 | MS.gene45918:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 45678458 | 45680143 | 45678458 | ID=MS.gene45918 |
| chr7.2 | mRNA | 45678458 | 45680143 | 45678458 | ID=MS.gene45918.t1;Parent=MS.gene45918 |
| chr7.2 | exon | 45678458 | 45678882 | 45678458 | ID=MS.gene45918.t1.exon1;Parent=MS.gene45918.t1 |
| chr7.2 | CDS | 45678458 | 45678882 | 45678458 | ID=cds.MS.gene45918.t1;Parent=MS.gene45918.t1 |
| chr7.2 | exon | 45679645 | 45680143 | 45679645 | ID=MS.gene45918.t1.exon2;Parent=MS.gene45918.t1 |
| chr7.2 | CDS | 45679645 | 45680143 | 45679645 | ID=cds.MS.gene45918.t1;Parent=MS.gene45918.t1 |
| Gene Sequence |
| Protein sequence |
