Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064321.t1 | XP_003620613.1 | 94.6 | 831 | 45 | 0 | 1 | 831 | 1 | 831 | 0.00E+00 | 1448.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064321.t1 | G7KPE2 | 94.6 | 831 | 45 | 0 | 1 | 831 | 1 | 831 | 0.0e+00 | 1448.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene064321 | 0.845096 | 5.02E-59 | -1.69E-46 |
| MS.gene049159 | MS.gene064321 | 0.821586 | 3.73E-53 | -1.69E-46 |
| MS.gene04918 | MS.gene064321 | 0.804405 | 2.19E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene064321 | 0.852769 | 3.71E-61 | -1.69E-46 |
| MS.gene049272 | MS.gene064321 | 0.80226 | 6.10E-49 | -1.69E-46 |
| MS.gene049343 | MS.gene064321 | 0.807577 | 4.72E-50 | -1.69E-46 |
| MS.gene049350 | MS.gene064321 | 0.800813 | 1.21E-48 | -1.69E-46 |
| MS.gene049404 | MS.gene064321 | 0.81536 | 9.62E-52 | -1.69E-46 |
| MS.gene049441 | MS.gene064321 | 0.802441 | 5.60E-49 | -1.69E-46 |
| MS.gene049499 | MS.gene064321 | 0.809138 | 2.19E-50 | -1.69E-46 |
| MS.gene049501 | MS.gene064321 | 0.83202 | 1.20E-55 | -1.69E-46 |
| MS.gene049666 | MS.gene064321 | 0.802263 | 6.09E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene064321 | 0.828644 | 8.02E-55 | -1.69E-46 |
| MS.gene049821 | MS.gene064321 | 0.80879 | 2.60E-50 | -1.69E-46 |
| MS.gene049824 | MS.gene064321 | 0.829264 | 5.67E-55 | -1.69E-46 |
| MS.gene049825 | MS.gene064321 | 0.826113 | 3.24E-54 | -1.69E-46 |
| MS.gene049850 | MS.gene064321 | 0.820232 | 7.65E-53 | -1.69E-46 |
| MS.gene049873 | MS.gene064321 | 0.814634 | 1.39E-51 | -1.69E-46 |
| MS.gene050026 | MS.gene064321 | 0.846764 | 1.77E-59 | -1.69E-46 |
| MS.gene050029 | MS.gene064321 | 0.804729 | 1.88E-49 | -1.69E-46 |
| MS.gene050125 | MS.gene064321 | 0.804019 | 2.64E-49 | -1.69E-46 |
| MS.gene050156 | MS.gene064321 | 0.80964 | 1.71E-50 | -1.69E-46 |
| MS.gene050355 | MS.gene064321 | 0.812338 | 4.46E-51 | -1.69E-46 |
| MS.gene05045 | MS.gene064321 | 0.808475 | 3.04E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene064321 | 0.816861 | 4.44E-52 | -1.69E-46 |
| MS.gene050561 | MS.gene064321 | 0.819005 | 1.46E-52 | -1.69E-46 |
| MS.gene050562 | MS.gene064321 | 0.813637 | 2.31E-51 | -1.69E-46 |
| MS.gene050799 | MS.gene064321 | 0.811717 | 6.09E-51 | -1.69E-46 |
| MS.gene050901 | MS.gene064321 | 0.811154 | 8.07E-51 | -1.69E-46 |
| MS.gene051198 | MS.gene064321 | 0.830192 | 3.37E-55 | -1.69E-46 |
| MS.gene051247 | MS.gene064321 | 0.852039 | 6.00E-61 | -1.69E-46 |
| MS.gene051279 | MS.gene064321 | 0.853329 | 2.57E-61 | -1.69E-46 |
| MS.gene051332 | MS.gene064321 | 0.818454 | 1.94E-52 | -1.69E-46 |
| MS.gene051388 | MS.gene064321 | 0.805918 | 1.06E-49 | -1.69E-46 |
| MS.gene051594 | MS.gene064321 | 0.823631 | 1.25E-53 | -1.69E-46 |
| MS.gene051700 | MS.gene064321 | 0.831662 | 1.47E-55 | -1.69E-46 |
| MS.gene051719 | MS.gene064321 | 0.852626 | 4.08E-61 | -1.69E-46 |
| MS.gene051720 | MS.gene064321 | 0.852654 | 4.00E-61 | -1.69E-46 |
| MS.gene051744 | MS.gene064321 | 0.879179 | 1.54E-69 | -1.69E-46 |
| MS.gene051957 | MS.gene064321 | 0.822389 | 2.43E-53 | -1.69E-46 |
| MS.gene052020 | MS.gene064321 | 0.804024 | 2.63E-49 | -1.69E-46 |
| MS.gene052208 | MS.gene064321 | 0.809423 | 1.91E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene064321 | 0.801722 | 7.87E-49 | -1.69E-46 |
| MS.gene052488 | MS.gene064321 | 0.815933 | 7.17E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene064321 | 0.813251 | 2.81E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene064321 | 0.848666 | 5.30E-60 | -1.69E-46 |
| MS.gene052582 | MS.gene064321 | 0.861081 | 1.32E-63 | -1.69E-46 |
| MS.gene052584 | MS.gene064321 | 0.872235 | 3.72E-67 | -1.69E-46 |
| MS.gene052611 | MS.gene064321 | 0.801009 | 1.10E-48 | -1.69E-46 |
| MS.gene052773 | MS.gene064321 | 0.855322 | 6.82E-62 | -1.69E-46 |
| MS.gene052863 | MS.gene064321 | 0.803182 | 3.94E-49 | -1.69E-46 |
| MS.gene052867 | MS.gene064321 | 0.829107 | 6.19E-55 | -1.69E-46 |
| MS.gene053079 | MS.gene064321 | 0.844055 | 9.58E-59 | -1.69E-46 |
| MS.gene05308 | MS.gene064321 | 0.809145 | 2.19E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene064321 | 0.844459 | 7.46E-59 | -1.69E-46 |
| MS.gene053144 | MS.gene064321 | 0.821591 | 3.72E-53 | -1.69E-46 |
| MS.gene053164 | MS.gene064321 | 0.802337 | 5.89E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene064321 | 0.890091 | 1.35E-73 | -1.69E-46 |
| MS.gene053296 | MS.gene064321 | 0.803559 | 3.29E-49 | -1.69E-46 |
| MS.gene053592 | MS.gene064321 | 0.809155 | 2.18E-50 | -1.69E-46 |
| MS.gene053599 | MS.gene064321 | 0.803978 | 2.69E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene064321 | 0.809326 | 2.00E-50 | -1.69E-46 |
| MS.gene05365 | MS.gene064321 | 0.842075 | 3.23E-58 | -1.69E-46 |
| MS.gene053883 | MS.gene064321 | 0.828914 | 6.90E-55 | -1.69E-46 |
| MS.gene053900 | MS.gene064321 | 0.802821 | 4.68E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene064321 | 0.806853 | 6.72E-50 | -1.69E-46 |
| MS.gene053974 | MS.gene064321 | 0.814801 | 1.28E-51 | -1.69E-46 |
| MS.gene053998 | MS.gene064321 | 0.803644 | 3.16E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene064321 | 0.803656 | 3.14E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene064321 | 0.829593 | 4.72E-55 | -1.69E-46 |
| MS.gene054236 | MS.gene064321 | 0.813314 | 2.73E-51 | -1.69E-46 |
| MS.gene05423 | MS.gene064321 | 0.846177 | 2.56E-59 | -1.69E-46 |
| MS.gene054576 | MS.gene064321 | 0.833139 | 6.33E-56 | -1.69E-46 |
| MS.gene054584 | MS.gene064321 | 0.824583 | 7.46E-54 | -1.69E-46 |
| MS.gene05458 | MS.gene064321 | 0.825637 | 4.21E-54 | -1.69E-46 |
| MS.gene054651 | MS.gene064321 | 0.867008 | 1.88E-65 | -1.69E-46 |
| MS.gene054775 | MS.gene064321 | 0.867931 | 9.51E-66 | -1.69E-46 |
| MS.gene054991 | MS.gene064321 | 0.844238 | 8.56E-59 | -1.69E-46 |
| MS.gene055228 | MS.gene064321 | 0.834669 | 2.62E-56 | -1.69E-46 |
| MS.gene05531 | MS.gene064321 | 0.807434 | 5.06E-50 | -1.69E-46 |
| MS.gene055357 | MS.gene064321 | 0.802066 | 6.69E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene064321 | 0.832833 | 7.54E-56 | -1.69E-46 |
| MS.gene055466 | MS.gene064321 | 0.843636 | 1.24E-58 | -1.69E-46 |
| MS.gene055468 | MS.gene064321 | 0.823907 | 1.08E-53 | -1.69E-46 |
| MS.gene055513 | MS.gene064321 | 0.82215 | 2.76E-53 | -1.69E-46 |
| MS.gene055537 | MS.gene064321 | 0.814075 | 1.85E-51 | -1.69E-46 |
| MS.gene055580 | MS.gene064321 | -0.82414 | 9.48E-54 | -1.69E-46 |
| MS.gene055586 | MS.gene064321 | 0.834996 | 2.17E-56 | -1.69E-46 |
| MS.gene055589 | MS.gene064321 | 0.833089 | 6.52E-56 | -1.69E-46 |
| MS.gene055694 | MS.gene064321 | 0.853155 | 2.88E-61 | -1.69E-46 |
| MS.gene055725 | MS.gene064321 | 0.809364 | 1.96E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene064321 | 0.830393 | 3.01E-55 | -1.69E-46 |
| MS.gene055808 | MS.gene064321 | 0.80503 | 1.62E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene064321 | 0.828464 | 8.86E-55 | -1.69E-46 |
| MS.gene056050 | MS.gene064321 | 0.855983 | 4.37E-62 | -1.69E-46 |
| MS.gene056162 | MS.gene064321 | 0.80722 | 5.62E-50 | -1.69E-46 |
| MS.gene056173 | MS.gene064321 | 0.81407 | 1.86E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene064321 | 0.83186 | 1.31E-55 | -1.69E-46 |
| MS.gene056215 | MS.gene064321 | 0.851864 | 6.72E-61 | -1.69E-46 |
| MS.gene056308 | MS.gene064321 | 0.832243 | 1.06E-55 | -1.69E-46 |
| MS.gene056366 | MS.gene064321 | 0.849531 | 3.05E-60 | -1.69E-46 |
| MS.gene056595 | MS.gene064321 | 0.839098 | 1.94E-57 | -1.69E-46 |
| MS.gene05686 | MS.gene064321 | 0.847743 | 9.53E-60 | -1.69E-46 |
| MS.gene05689 | MS.gene064321 | 0.8013 | 9.61E-49 | -1.69E-46 |
| MS.gene05690 | MS.gene064321 | 0.845608 | 3.65E-59 | -1.69E-46 |
| MS.gene057026 | MS.gene064321 | 0.801636 | 8.20E-49 | -1.69E-46 |
| MS.gene057027 | MS.gene064321 | 0.815758 | 7.85E-52 | -1.69E-46 |
| MS.gene057060 | MS.gene064321 | 0.812431 | 4.25E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene064321 | 0.803034 | 4.23E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene064321 | 0.811651 | 6.29E-51 | -1.69E-46 |
| MS.gene057314 | MS.gene064321 | 0.82268 | 2.08E-53 | -1.69E-46 |
| MS.gene057414 | MS.gene064321 | 0.815723 | 7.99E-52 | -1.69E-46 |
| MS.gene057444 | MS.gene064321 | 0.862328 | 5.48E-64 | -1.69E-46 |
| MS.gene057598 | MS.gene064321 | 0.840293 | 9.49E-58 | -1.69E-46 |
| MS.gene057693 | MS.gene064321 | 0.804096 | 2.55E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene064321 | 0.823553 | 1.30E-53 | -1.69E-46 |
| MS.gene058008 | MS.gene064321 | 0.801412 | 9.12E-49 | -1.69E-46 |
| MS.gene058009 | MS.gene064321 | 0.826115 | 3.24E-54 | -1.69E-46 |
| MS.gene058010 | MS.gene064321 | 0.828186 | 1.03E-54 | -1.69E-46 |
| MS.gene058037 | MS.gene064321 | 0.845709 | 3.43E-59 | -1.69E-46 |
| MS.gene058625 | MS.gene064321 | 0.860269 | 2.32E-63 | -1.69E-46 |
| MS.gene058636 | MS.gene064321 | 0.806078 | 9.79E-50 | -1.69E-46 |
| MS.gene058781 | MS.gene064321 | 0.804929 | 1.71E-49 | -1.69E-46 |
| MS.gene058783 | MS.gene064321 | 0.808318 | 3.29E-50 | -1.69E-46 |
| MS.gene058829 | MS.gene064321 | 0.817109 | 3.91E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene064321 | 0.855108 | 7.87E-62 | -1.69E-46 |
| MS.gene059015 | MS.gene064321 | 0.817631 | 2.98E-52 | -1.69E-46 |
| MS.gene059084 | MS.gene064321 | 0.837331 | 5.54E-57 | -1.69E-46 |
| MS.gene05925 | MS.gene064321 | 0.815493 | 8.99E-52 | -1.69E-46 |
| MS.gene059272 | MS.gene064321 | 0.831152 | 1.96E-55 | -1.69E-46 |
| MS.gene059458 | MS.gene064321 | 0.800323 | 1.52E-48 | -1.69E-46 |
| MS.gene059459 | MS.gene064321 | 0.809892 | 1.51E-50 | -1.69E-46 |
| MS.gene059460 | MS.gene064321 | 0.830917 | 2.24E-55 | -1.69E-46 |
| MS.gene05954 | MS.gene064321 | 0.824263 | 8.88E-54 | -1.69E-46 |
| MS.gene059570 | MS.gene064321 | 0.834228 | 3.38E-56 | -1.69E-46 |
| MS.gene059601 | MS.gene064321 | 0.804351 | 2.25E-49 | -1.69E-46 |
| MS.gene059602 | MS.gene064321 | 0.801987 | 6.95E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene064321 | 0.954056 | 6.96E-112 | -1.69E-46 |
| MS.gene059842 | MS.gene064321 | 0.806108 | 9.65E-50 | -1.69E-46 |
| MS.gene059935 | MS.gene064321 | 0.807617 | 4.63E-50 | -1.69E-46 |
| MS.gene060258 | MS.gene064321 | 0.803492 | 3.40E-49 | -1.69E-46 |
| MS.gene060310 | MS.gene064321 | 0.812549 | 4.01E-51 | -1.69E-46 |
| MS.gene060355 | MS.gene064321 | 0.804256 | 2.36E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene064321 | 0.816735 | 4.75E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene064321 | 0.835203 | 1.92E-56 | -1.69E-46 |
| MS.gene060519 | MS.gene064321 | 0.803768 | 2.98E-49 | -1.69E-46 |
| MS.gene060521 | MS.gene064321 | 0.826574 | 2.52E-54 | -1.69E-46 |
| MS.gene060572 | MS.gene064321 | 0.813711 | 2.23E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene064321 | 0.830163 | 3.43E-55 | -1.69E-46 |
| MS.gene060935 | MS.gene064321 | 0.817261 | 3.61E-52 | -1.69E-46 |
| MS.gene060937 | MS.gene064321 | 0.808846 | 2.53E-50 | -1.69E-46 |
| MS.gene06094 | MS.gene064321 | 0.821574 | 3.76E-53 | -1.69E-46 |
| MS.gene061100 | MS.gene064321 | 0.818423 | 1.98E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064321.t1 | MTR_6g087760 | 94.585 | 831 | 45 | 0 | 1 | 831 | 1 | 831 | 0.0 | 1598 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064321.t1 | AT3G24630 | 41.463 | 205 | 102 | 8 | 1 | 198 | 10 | 203 | 3.99e-27 | 118 |
| MS.gene064321.t1 | AT3G24630 | 41.463 | 205 | 102 | 8 | 1 | 198 | 10 | 203 | 3.99e-27 | 118 |
Find 122 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAGTGTCTTCTCTCTTTC+TGG | 0.005612 | 6.1:-76646316 | None:intergenic |
| TTCTGAGACTAAACTTATTT+TGG | 0.076991 | 6.1:+76648201 | MS.gene064321:CDS |
| ATCCAATACAAGACTCTATT+TGG | 0.158315 | 6.1:+76648012 | MS.gene064321:CDS |
| TCAATCTTTGGTAGGATCTT+AGG | 0.207375 | 6.1:-76647977 | None:intergenic |
| TTCAAGATTGCAAATCTCTT+TGG | 0.228602 | 6.1:+76648120 | MS.gene064321:CDS |
| GGAACTTAAGAAAGTGATTA+AGG | 0.234384 | 6.1:+76645961 | MS.gene064321:CDS |
| ATTGCAAAGGATTTGTTAAA+AGG | 0.236779 | 6.1:+76645734 | MS.gene064321:CDS |
| TTTGAACACAATTCAGCTTA+TGG | 0.266042 | 6.1:+76645917 | MS.gene064321:CDS |
| ATTCCATTAGTTTCAATCTT+TGG | 0.272555 | 6.1:-76647989 | None:intergenic |
| GAAAGTGATTAAGGAGAGTT+TGG | 0.281612 | 6.1:+76645970 | MS.gene064321:CDS |
| GCAAATCTCTTTGGGAAGTT+TGG | 0.283823 | 6.1:+76648129 | MS.gene064321:CDS |
| CCACACTCAACAACTCCTTT+TGG | 0.288999 | 6.1:-76645467 | None:intergenic |
| ACCTCGGCGCGCTTCGTATC+AGG | 0.299020 | 6.1:+76646480 | MS.gene064321:CDS |
| CCCTACACAAGTTAGCAATA+AGG | 0.311630 | 6.1:-76648095 | None:intergenic |
| GCAAGAAGCTTCGAATAGTA+TGG | 0.317136 | 6.1:+76645799 | MS.gene064321:CDS |
| CTTCAGAAGTGCTTGTGCTT+TGG | 0.319474 | 6.1:-76646009 | None:intergenic |
| TGCAACAATAGGTTGATAAA+TGG | 0.321009 | 6.1:+76648259 | MS.gene064321:CDS |
| CATCATCAACTGAAGAATTC+TGG | 0.321444 | 6.1:-76647718 | None:intergenic |
| CCTACACAAGTTAGCAATAA+GGG | 0.324395 | 6.1:-76648094 | None:intergenic |
| ACAATAGGTTTAGCTGCTTC+AGG | 0.328588 | 6.1:-76647072 | None:intergenic |
| GATTGACTTGAGCTTGTAGA+AGG | 0.330319 | 6.1:-76646058 | None:intergenic |
| TGAACCTTCCCTTGGTTTGA+AGG | 0.332725 | 6.1:-76646584 | None:intergenic |
| CAAGTCAATCTTCTGTTGTT+TGG | 0.332774 | 6.1:+76646071 | MS.gene064321:CDS |
| GAGTTTCTCAATCTTGATAT+TGG | 0.338989 | 6.1:+76647950 | MS.gene064321:CDS |
| CGAAGCCTGTGCTCTCTAAT+AGG | 0.344717 | 6.1:-76646385 | None:intergenic |
| GATGAAATGCTCTTTCTAGA+TGG | 0.352127 | 6.1:-76646949 | None:intergenic |
| AGCTCAGAAGTGTCTTTGTC+TGG | 0.357390 | 6.1:-76647881 | None:intergenic |
| CTACCAAAGATTGAAACTAA+TGG | 0.362800 | 6.1:+76647986 | MS.gene064321:CDS |
| TCAAGATTGCAAATCTCTTT+GGG | 0.367770 | 6.1:+76648121 | MS.gene064321:CDS |
| CTCAAGATCAAGGCGAAATC+AGG | 0.377524 | 6.1:+76646866 | MS.gene064321:CDS |
| CTTGAAACTACTCATTTCAA+TGG | 0.383813 | 6.1:+76646346 | MS.gene064321:CDS |
| TCCATCTTCTTTGCAGCTTG+TGG | 0.385624 | 6.1:+76645628 | MS.gene064321:CDS |
| GTCTTTGTCTGGCTCGAAAT+CGG | 0.387248 | 6.1:-76647870 | None:intergenic |
| CAATCTTGTTGCAAGGTTGA+TGG | 0.390483 | 6.1:+76646153 | MS.gene064321:CDS |
| CACAAGCACTTCTGAAGGAT+TGG | 0.417407 | 6.1:+76646015 | MS.gene064321:CDS |
| ATGGTCAATAAATGATTTGC+TGG | 0.418671 | 6.1:-76647921 | None:intergenic |
| GAAAACTCTTCTCGAGGAAC+CGG | 0.426957 | 6.1:-76646523 | None:intergenic |
| GTGGAAGTCTGAGGAGATAT+AGG | 0.427056 | 6.1:+76645486 | MS.gene064321:CDS |
| GAACTATGCTTTCTTACCTT+CGG | 0.429427 | 6.1:-76646280 | None:intergenic |
| GAGATATGAAGTGCAACAAT+AGG | 0.438346 | 6.1:+76648248 | MS.gene064321:CDS |
| TGTTTGGTATGACAAACTTT+CGG | 0.440918 | 6.1:+76646087 | MS.gene064321:CDS |
| ATCCAAATAGAGTCTTGTAT+TGG | 0.447170 | 6.1:-76648014 | None:intergenic |
| TCAATCCTCGACACACTTCG+CGG | 0.449222 | 6.1:-76646913 | None:intergenic |
| CAAGAAGAAGGAATGAGTTT+CGG | 0.458989 | 6.1:+76647238 | MS.gene064321:CDS |
| TTTAGAAATCCAAAAGCAAA+AGG | 0.462194 | 6.1:+76646547 | MS.gene064321:CDS |
| CAGAAAGAGAGAAGACACTA+AGG | 0.462255 | 6.1:+76646317 | MS.gene064321:CDS |
| AATTGTAATGTTCTTTACCT+TGG | 0.464078 | 6.1:-76646791 | None:intergenic |
| ACAGATGGAAATGTTCTTGA+AGG | 0.464421 | 6.1:-76646190 | None:intergenic |
| TTGGTAGTTGAACCTTCCCT+TGG | 0.465370 | 6.1:-76646592 | None:intergenic |
| AATCTTGTTGCAAGGTTGAT+GGG | 0.467441 | 6.1:+76646154 | MS.gene064321:CDS |
| GGATCATCACATGTCACAAA+TGG | 0.467560 | 6.1:-76645446 | None:intergenic |
| GGATAATATTTGTGCAATGT+TGG | 0.470489 | 6.1:+76648222 | MS.gene064321:CDS |
| CATCAACCTTGCAACAAGAT+TGG | 0.470581 | 6.1:-76646152 | None:intergenic |
| CCCTTATTGCTAACTTGTGT+AGG | 0.479938 | 6.1:+76648094 | MS.gene064321:CDS |
| CAAATCCTTTGCAATATCAT+CGG | 0.484517 | 6.1:-76645726 | None:intergenic |
| CTAACTGTGATGACTCTTGA+AGG | 0.485315 | 6.1:-76648066 | None:intergenic |
| ATCTTCTTTGCAGCTTGTGG+AGG | 0.488367 | 6.1:+76645631 | MS.gene064321:CDS |
| ATTGATGCAAATGTGAATGA+TGG | 0.489421 | 6.1:+76645866 | MS.gene064321:CDS |
| CAACATGAGAAAAGAGATGA+TGG | 0.491361 | 6.1:+76646612 | MS.gene064321:CDS |
| GTCAAATTCTCACAAAATGA+AGG | 0.492656 | 6.1:+76645508 | MS.gene064321:CDS |
| AAAGAAGAGAAGGTATCAAA+AGG | 0.495584 | 6.1:+76645584 | MS.gene064321:CDS |
| TCCACAAGCTGCAAAGAAGA+TGG | 0.495903 | 6.1:-76645629 | None:intergenic |
| CCTTATTGCTAACTTGTGTA+GGG | 0.510663 | 6.1:+76648095 | MS.gene064321:CDS |
| CATTAGTTTCAATCTTTGGT+AGG | 0.513835 | 6.1:-76647985 | None:intergenic |
| TAAGACAAAGTGCCGAAAGC+CGG | 0.516544 | 6.1:+76645532 | MS.gene064321:CDS |
| ATGGAATGTGGAACTGTGGT+TGG | 0.517006 | 6.1:+76648278 | MS.gene064321:CDS |
| CACAAAACCAAAGACACAAA+AGG | 0.518586 | 6.1:+76646990 | MS.gene064321:CDS |
| CGAGGTTTCATGAGTACAAT+CGG | 0.522887 | 6.1:-76646463 | None:intergenic |
| TCTCAGAAAACCGATACAAA+AGG | 0.524589 | 6.1:+76646813 | MS.gene064321:CDS |
| ACCTCTAGTCTTATTTGCAT+AGG | 0.528727 | 6.1:-76647344 | None:intergenic |
| CAGCTTGTGGAGGTCTCTAG+AGG | 0.534580 | 6.1:+76645641 | MS.gene064321:CDS |
| GTGGCAAAAGCTCAAGATCA+AGG | 0.536217 | 6.1:+76646856 | MS.gene064321:CDS |
| GTAGTCCTATTAGAGAGCAC+AGG | 0.539680 | 6.1:+76646380 | MS.gene064321:CDS |
| TTTGCAGATAATTGCGAGGA+GGG | 0.540057 | 6.1:+76647695 | MS.gene064321:intron |
| TGGAACTGTGGTTGGAGGCA+TGG | 0.542412 | 6.1:+76648286 | MS.gene064321:CDS |
| CAGATGGAAATGTTCTTGAA+GGG | 0.547681 | 6.1:-76646189 | None:intergenic |
| CAAAGCACAAGCACTTCTGA+AGG | 0.559925 | 6.1:+76646010 | MS.gene064321:CDS |
| GTCTCTAGAGATGCTTCGTA+AGG | 0.563353 | 6.1:+76645775 | MS.gene064321:CDS |
| ACGAGCTTCCTCAGCAAGGA+TGG | 0.565299 | 6.1:-76647774 | None:intergenic |
| AAAGTACCAATCTTGTTGCA+AGG | 0.570805 | 6.1:+76646146 | MS.gene064321:CDS |
| TAAACAAGACAAAGAAGAGA+AGG | 0.573687 | 6.1:+76645574 | MS.gene064321:CDS |
| AGATGGAAATGTTCTTGAAG+GGG | 0.581235 | 6.1:-76646188 | None:intergenic |
| CAAGAAGCTTCGAATAGTAT+GGG | 0.582027 | 6.1:+76645800 | MS.gene064321:CDS |
| ATGATTGAGTCGTGGTCTAG+AGG | 0.582241 | 6.1:+76645683 | MS.gene064321:CDS |
| ATATGATGTGAAAGAAATCA+AGG | 0.588240 | 6.1:+76646699 | MS.gene064321:CDS |
| ATTGACTTGAGCTTGTAGAA+GGG | 0.591382 | 6.1:-76646057 | None:intergenic |
| ACAAAAGGTTAACAGTTCAA+AGG | 0.591951 | 6.1:+76647005 | MS.gene064321:CDS |
| AAAACCTTCAAACCAAGGGA+AGG | 0.592501 | 6.1:+76646580 | MS.gene064321:CDS |
| ATTGCTGACACCGTCTGTAT+CGG | 0.594229 | 6.1:+76647842 | MS.gene064321:CDS |
| GAAACAAGTTTCACTGACGC+TGG | 0.594603 | 6.1:-76647804 | None:intergenic |
| GGTGTGTCAATCTCGAACAC+AGG | 0.598187 | 6.1:-76646259 | None:intergenic |
| CTAAAGGAAAACTCTTCTCG+AGG | 0.598786 | 6.1:-76646529 | None:intergenic |
| ATAGGTTGATAAATGGAATG+TGG | 0.600587 | 6.1:+76648266 | MS.gene064321:CDS |
| TCTAGAGGTGTGAGGTACGA+TGG | 0.603601 | 6.1:+76645698 | MS.gene064321:CDS |
| CTCTTCAAGTAGTTGTAGAG+AGG | 0.610288 | 6.1:+76645940 | MS.gene064321:CDS |
| GAATGTGGAACTGTGGTTGG+AGG | 0.612560 | 6.1:+76648281 | MS.gene064321:CDS |
| AGAAAGAGAGAAGACACTAA+GGG | 0.612920 | 6.1:+76646318 | MS.gene064321:CDS |
| GATTGAGAAACTCATCTGCA+TGG | 0.613355 | 6.1:-76647940 | None:intergenic |
| AAAATCCGATGATATTGCAA+AGG | 0.617942 | 6.1:+76645721 | MS.gene064321:CDS |
| CAAGGCTGTTGAAAGCAAGA+AGG | 0.619477 | 6.1:+76646717 | MS.gene064321:CDS |
| TCGATTGAAGAGAAGACAAG+AGG | 0.624969 | 6.1:+76645823 | MS.gene064321:CDS |
| CAGAAAACCGATACAAAAGG+AGG | 0.626337 | 6.1:+76646816 | MS.gene064321:CDS |
| GTGACATGTGATGATCCAAA+AGG | 0.628008 | 6.1:+76645452 | MS.gene064321:CDS |
| CCAAAAGGAGTTGTTGAGTG+TGG | 0.631426 | 6.1:+76645467 | MS.gene064321:CDS |
| GTTCGTAGAAACGTACGAGC+CGG | 0.631601 | 6.1:+76646504 | MS.gene064321:CDS |
| ACCTATGCAAATAAGACTAG+AGG | 0.635482 | 6.1:+76647343 | MS.gene064321:CDS |
| CTACACAAGTTAGCAATAAG+GGG | 0.636387 | 6.1:-76648093 | None:intergenic |
| GAAAGCCGCGAAGTGTGTCG+AGG | 0.637298 | 6.1:+76646908 | MS.gene064321:CDS |
| CGATTGTACTCATGAAACCT+CGG | 0.638305 | 6.1:+76646464 | MS.gene064321:CDS |
| TCCTGATACGAAGCGCGCCG+AGG | 0.641562 | 6.1:-76646481 | None:intergenic |
| AAATGATACCATCCTTGCTG+AGG | 0.642227 | 6.1:+76647766 | MS.gene064321:CDS |
| TTGTTGAGTGTGGAAGTCTG+AGG | 0.647195 | 6.1:+76645477 | MS.gene064321:CDS |
| GGTTTCAAAAGCTAAAATTG+TGG | 0.654649 | 6.1:+76646837 | MS.gene064321:CDS |
| TGTCACGAGCTTCCTCAGCA+AGG | 0.661150 | 6.1:-76647778 | None:intergenic |
| ATCGGTTTCACCGATACAGA+CGG | 0.665581 | 6.1:-76647852 | None:intergenic |
| ATAAATGGAATGTGGAACTG+TGG | 0.666233 | 6.1:+76648274 | MS.gene064321:CDS |
| TGAACAACATGATTGAGTCG+TGG | 0.687574 | 6.1:+76645675 | MS.gene064321:CDS |
| GTTCGAGATTGACACACCGA+AGG | 0.719145 | 6.1:+76646264 | MS.gene064321:CDS |
| AGTCGTGGTCTAGAGGTGTG+AGG | 0.724136 | 6.1:+76645690 | MS.gene064321:CDS |
| GGTTTCATGAGTACAATCGG+TGG | 0.732087 | 6.1:-76646460 | None:intergenic |
| ACAAGTTTCACTGACGCTGG+TGG | 0.738203 | 6.1:-76647801 | None:intergenic |
| AGTAACAGAAGATCTCATCG+TGG | 0.778770 | 6.1:+76647306 | MS.gene064321:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTGTCTCTAAATTTT+CGG | - | chr6.1:76645558-76645577 | None:intergenic | 15.0% |
| !! | ATTATACTATTTATCCAAAC+AGG | - | chr6.1:76647404-76647423 | None:intergenic | 20.0% |
| !! | CATATAAGTTCTTATGTATA+TGG | + | chr6.1:76647450-76647469 | MS.gene064321:intron | 20.0% |
| !! | TTATACTATTTATCCAAACA+GGG | - | chr6.1:76647403-76647422 | None:intergenic | 20.0% |
| !!! | TAAATTTCTAAAATTGTCAC+TGG | + | chr6.1:76647366-76647385 | MS.gene064321:intron | 20.0% |
| !!! | TCATTTTTTTTTTGTCTCTA+TGG | + | chr6.1:76647106-76647125 | MS.gene064321:intron | 20.0% |
| ! | AATGAATTGAAACTCATTGA+AGG | - | chr6.1:76647189-76647208 | None:intergenic | 25.0% |
| ! | AATTGTAATGTTCTTTACCT+TGG | - | chr6.1:76646794-76646813 | None:intergenic | 25.0% |
| ! | ATATGATGTGAAAGAAATCA+AGG | + | chr6.1:76646699-76646718 | MS.gene064321:CDS | 25.0% |
| ! | ATCCAAAAAGTTTATCAAAG+AGG | + | chr6.1:76646645-76646664 | MS.gene064321:CDS | 25.0% |
| ! | ATGACAGTAAAACTTACAAT+AGG | - | chr6.1:76647090-76647109 | None:intergenic | 25.0% |
| ! | GAAAAATTAAAGCAAGAAGA+AGG | + | chr6.1:76647226-76647245 | MS.gene064321:CDS | 25.0% |
| ! | TATCATCACACTGAATAAAT+TGG | + | chr6.1:76647647-76647666 | MS.gene064321:intron | 25.0% |
| ! | TATCTTGCATAAAAGAGTTT+AGG | + | chr6.1:76647155-76647174 | MS.gene064321:intron | 25.0% |
| ! | TGCTTCTAATAATCTAACAA+GGG | - | chr6.1:76647623-76647642 | None:intergenic | 25.0% |
| ! | TTTAGAAATCCAAAAGCAAA+AGG | + | chr6.1:76646547-76646566 | MS.gene064321:CDS | 25.0% |
| !! | ATTCCATTAGTTTCAATCTT+TGG | - | chr6.1:76647992-76648011 | None:intergenic | 25.0% |
| !! | GAAGTAGAAAACATGATTTT+AGG | + | chr6.1:76648343-76648362 | MS.gene064321:CDS | 25.0% |
| !!! | ATTGCAAAGGATTTGTTAAA+AGG | + | chr6.1:76645734-76645753 | MS.gene064321:CDS | 25.0% |
| !!! | TTCTGAGACTAAACTTATTT+TGG | + | chr6.1:76648201-76648220 | MS.gene064321:CDS | 25.0% |
| !!! | TTTTGCTTTTGGATTTCTAA+AGG | - | chr6.1:76646548-76646567 | None:intergenic | 25.0% |
| AAAATCCGATGATATTGCAA+AGG | + | chr6.1:76645721-76645740 | MS.gene064321:CDS | 30.0% | |
| AATTCATTATTCTTGTGCAC+AGG | + | chr6.1:76647201-76647220 | MS.gene064321:intron | 30.0% | |
| ACAAAAGGTTAACAGTTCAA+AGG | + | chr6.1:76647005-76647024 | MS.gene064321:CDS | 30.0% | |
| ATCCAATACAAGACTCTATT+TGG | + | chr6.1:76648012-76648031 | MS.gene064321:CDS | 30.0% | |
| ATCTGTTATGCAAAAACAGT+CGG | + | chr6.1:76646207-76646226 | MS.gene064321:CDS | 30.0% | |
| ATTGATGCAAATGTGAATGA+TGG | + | chr6.1:76645866-76645885 | MS.gene064321:CDS | 30.0% | |
| CAAATCCTTTGCAATATCAT+CGG | - | chr6.1:76645729-76645748 | None:intergenic | 30.0% | |
| CTACCAAAGATTGAAACTAA+TGG | + | chr6.1:76647986-76648005 | MS.gene064321:CDS | 30.0% | |
| CTTGAAACTACTCATTTCAA+TGG | + | chr6.1:76646346-76646365 | MS.gene064321:CDS | 30.0% | |
| GAGTTTCTCAATCTTGATAT+TGG | + | chr6.1:76647950-76647969 | MS.gene064321:CDS | 30.0% | |
| GGAACTTAAGAAAGTGATTA+AGG | + | chr6.1:76645961-76645980 | MS.gene064321:CDS | 30.0% | |
| GGATAATATTTGTGCAATGT+TGG | + | chr6.1:76648222-76648241 | MS.gene064321:CDS | 30.0% | |
| GGTTTCAAAAGCTAAAATTG+TGG | + | chr6.1:76646837-76646856 | MS.gene064321:CDS | 30.0% | |
| GTCAAATTCTCACAAAATGA+AGG | + | chr6.1:76645508-76645527 | MS.gene064321:CDS | 30.0% | |
| GTGCTTCTAATAATCTAACA+AGG | - | chr6.1:76647624-76647643 | None:intergenic | 30.0% | |
| TAAACAAGACAAAGAAGAGA+AGG | + | chr6.1:76645574-76645593 | MS.gene064321:CDS | 30.0% | |
| TCAAGATTGCAAATCTCTTT+GGG | + | chr6.1:76648121-76648140 | MS.gene064321:CDS | 30.0% | |
| TGTTTGGTATGACAAACTTT+CGG | + | chr6.1:76646087-76646106 | MS.gene064321:CDS | 30.0% | |
| TTCAAAAACCTTCAAACCAA+GGG | + | chr6.1:76646576-76646595 | MS.gene064321:CDS | 30.0% | |
| TTCAAGATTGCAAATCTCTT+TGG | + | chr6.1:76648120-76648139 | MS.gene064321:CDS | 30.0% | |
| TTTGAACACAATTCAGCTTA+TGG | + | chr6.1:76645917-76645936 | MS.gene064321:CDS | 30.0% | |
| ! | ATCCAAATAGAGTCTTGTAT+TGG | - | chr6.1:76648017-76648036 | None:intergenic | 30.0% |
| ! | ATGGTCAATAAATGATTTGC+TGG | - | chr6.1:76647924-76647943 | None:intergenic | 30.0% |
| ! | CATTAGTTTCAATCTTTGGT+AGG | - | chr6.1:76647988-76648007 | None:intergenic | 30.0% |
| ! | CTCCTCTTTGATAAACTTTT+TGG | - | chr6.1:76646650-76646669 | None:intergenic | 30.0% |
| ! | GTAGAAAACATGATTTTAGG+TGG | + | chr6.1:76648346-76648365 | MS.gene064321:CDS | 30.0% |
| ! | TTTTCCTTCCTTGAAAAAGT+TGG | - | chr6.1:76646127-76646146 | None:intergenic | 30.0% |
| !! | AAAGAAGAGAAGGTATCAAA+AGG | + | chr6.1:76645584-76645603 | MS.gene064321:CDS | 30.0% |
| !! | ATAGGTTGATAAATGGAATG+TGG | + | chr6.1:76648266-76648285 | MS.gene064321:CDS | 30.0% |
| !! | TGCAACAATAGGTTGATAAA+TGG | + | chr6.1:76648259-76648278 | MS.gene064321:CDS | 30.0% |
| !! | TTTGAAACCTCCTTTTGTAT+CGG | - | chr6.1:76646826-76646845 | None:intergenic | 30.0% |
| !!! | GATTTTAGGTGGATTAATTG+AGG | + | chr6.1:76648357-76648376 | MS.gene064321:CDS | 30.0% |
| AATTGTCACTGGATACACTT+TGG | + | chr6.1:76647377-76647396 | MS.gene064321:intron | 35.0% | |
| ACAGATGGAAATGTTCTTGA+AGG | - | chr6.1:76646193-76646212 | None:intergenic | 35.0% | |
| ACCTATGCAAATAAGACTAG+AGG | + | chr6.1:76647343-76647362 | MS.gene064321:CDS | 35.0% | |
| AGAAAGAGAGAAGACACTAA+GGG | + | chr6.1:76646318-76646337 | MS.gene064321:CDS | 35.0% | |
| AGATGGAAATGTTCTTGAAG+GGG | - | chr6.1:76646191-76646210 | None:intergenic | 35.0% | |
| ATAAATGGAATGTGGAACTG+TGG | + | chr6.1:76648274-76648293 | MS.gene064321:CDS | 35.0% | |
| CAACATGAGAAAAGAGATGA+TGG | + | chr6.1:76646612-76646631 | MS.gene064321:CDS | 35.0% | |
| CAAGAAGAAGGAATGAGTTT+CGG | + | chr6.1:76647238-76647257 | MS.gene064321:CDS | 35.0% | |
| CAAGAAGCTTCGAATAGTAT+GGG | + | chr6.1:76645800-76645819 | MS.gene064321:CDS | 35.0% | |
| CAAGTCAATCTTCTGTTGTT+TGG | + | chr6.1:76646071-76646090 | MS.gene064321:CDS | 35.0% | |
| CACAAAACCAAAGACACAAA+AGG | + | chr6.1:76646990-76647009 | MS.gene064321:CDS | 35.0% | |
| CAGATGGAAATGTTCTTGAA+GGG | - | chr6.1:76646192-76646211 | None:intergenic | 35.0% | |
| CATCATCAACTGAAGAATTC+TGG | - | chr6.1:76647721-76647740 | None:intergenic | 35.0% | |
| CCTACACAAGTTAGCAATAA+GGG | - | chr6.1:76648097-76648116 | None:intergenic | 35.0% | |
| CTACACAAGTTAGCAATAAG+GGG | - | chr6.1:76648096-76648115 | None:intergenic | 35.0% | |
| CTTCAAAAACCTTCAAACCA+AGG | + | chr6.1:76646575-76646594 | MS.gene064321:CDS | 35.0% | |
| GAAAGTGATTAAGGAGAGTT+TGG | + | chr6.1:76645970-76645989 | MS.gene064321:CDS | 35.0% | |
| GAACTATGCTTTCTTACCTT+CGG | - | chr6.1:76646283-76646302 | None:intergenic | 35.0% | |
| GAGATATGAAGTGCAACAAT+AGG | + | chr6.1:76648248-76648267 | MS.gene064321:CDS | 35.0% | |
| GATGAAATGCTCTTTCTAGA+TGG | - | chr6.1:76646952-76646971 | None:intergenic | 35.0% | |
| TCAATCTTTGGTAGGATCTT+AGG | - | chr6.1:76647980-76647999 | None:intergenic | 35.0% | |
| TCTCAGAAAACCGATACAAA+AGG | + | chr6.1:76646813-76646832 | MS.gene064321:CDS | 35.0% | |
| ! | AAAGTACCAATCTTGTTGCA+AGG | + | chr6.1:76646146-76646165 | MS.gene064321:CDS | 35.0% |
| ! | AATCTTGTTGCAAGGTTGAT+GGG | + | chr6.1:76646154-76646173 | MS.gene064321:CDS | 35.0% |
| ! | CATCATCTCTTTTCTCATGT+TGG | - | chr6.1:76646614-76646633 | None:intergenic | 35.0% |
| ! | CCTTATTGCTAACTTGTGTA+GGG | + | chr6.1:76648095-76648114 | MS.gene064321:CDS | 35.0% |
| ! | CTGTTAACCTTTTGTGTCTT+TGG | - | chr6.1:76647000-76647019 | None:intergenic | 35.0% |
| ! | TAATCTAACAAGGGCATGTT+TGG | - | chr6.1:76647614-76647633 | None:intergenic | 35.0% |
| ! | TTTGTCTCTAAATTTTCGGC+CGG | - | chr6.1:76645554-76645573 | None:intergenic | 35.0% |
| !! | AACAGTTGATGAAAAAGCCA+AGG | + | chr6.1:76646774-76646793 | MS.gene064321:CDS | 35.0% |
| !! | ACCTCTAGTCTTATTTGCAT+AGG | - | chr6.1:76647347-76647366 | None:intergenic | 35.0% |
| !! | ATTGACTTGAGCTTGTAGAA+GGG | - | chr6.1:76646060-76646079 | None:intergenic | 35.0% |
| !! | CTTGGTTTGAAGGTTTTTGA+AGG | - | chr6.1:76646577-76646596 | None:intergenic | 35.0% |
| !!! | CATGTTCACCAACTTTTTCA+AGG | + | chr6.1:76646116-76646135 | MS.gene064321:CDS | 35.0% |
| !!! | GACTGTTTTTGCATAACAGA+TGG | - | chr6.1:76646208-76646227 | None:intergenic | 35.0% |
| !!! | TTCACCAACTTTTTCAAGGA+AGG | + | chr6.1:76646120-76646139 | MS.gene064321:CDS | 35.0% |
| !!! | TTGTGTCTTTGGTTTTGTGA+TGG | - | chr6.1:76646989-76647008 | None:intergenic | 35.0% |
| AAAACCTTCAAACCAAGGGA+AGG | + | chr6.1:76646580-76646599 | MS.gene064321:CDS | 40.0% | |
| AAATGATACCATCCTTGCTG+AGG | + | chr6.1:76647766-76647785 | MS.gene064321:CDS | 40.0% | |
| ACAATAGGTTTAGCTGCTTC+AGG | - | chr6.1:76647075-76647094 | None:intergenic | 40.0% | |
| AGTAACAGAAGATCTCATCG+TGG | + | chr6.1:76647306-76647325 | MS.gene064321:CDS | 40.0% | |
| CAATCTTGTTGCAAGGTTGA+TGG | + | chr6.1:76646153-76646172 | MS.gene064321:CDS | 40.0% | |
| CAGAAAACCGATACAAAAGG+AGG | + | chr6.1:76646816-76646835 | MS.gene064321:CDS | 40.0% | |
| CAGAAAGAGAGAAGACACTA+AGG | + | chr6.1:76646317-76646336 | MS.gene064321:CDS | 40.0% | |
| CATCAACCTTGCAACAAGAT+TGG | - | chr6.1:76646155-76646174 | None:intergenic | 40.0% | |
| CCCTACACAAGTTAGCAATA+AGG | - | chr6.1:76648098-76648117 | None:intergenic | 40.0% | |
| CCTCGCAATTATCTGCAAAA+GGG | - | chr6.1:76647694-76647713 | None:intergenic | 40.0% | |
| CGAGGTTTCATGAGTACAAT+CGG | - | chr6.1:76646466-76646485 | None:intergenic | 40.0% | |
| CGATTGTACTCATGAAACCT+CGG | + | chr6.1:76646464-76646483 | MS.gene064321:CDS | 40.0% | |
| CTAAAGGAAAACTCTTCTCG+AGG | - | chr6.1:76646532-76646551 | None:intergenic | 40.0% | |
| CTAACTGTGATGACTCTTGA+AGG | - | chr6.1:76648069-76648088 | None:intergenic | 40.0% | |
| CTCTTCAAGTAGTTGTAGAG+AGG | + | chr6.1:76645940-76645959 | MS.gene064321:CDS | 40.0% | |
| CTTAGTGTCTTCTCTCTTTC+TGG | - | chr6.1:76646319-76646338 | None:intergenic | 40.0% | |
| GATTGAGAAACTCATCTGCA+TGG | - | chr6.1:76647943-76647962 | None:intergenic | 40.0% | |
| GCAAGAAGCTTCGAATAGTA+TGG | + | chr6.1:76645799-76645818 | MS.gene064321:CDS | 40.0% | |
| GGATCATCACATGTCACAAA+TGG | - | chr6.1:76645449-76645468 | None:intergenic | 40.0% | |
| GTCGATGAGCATCTCATAAA+CGG | + | chr6.1:76647545-76647564 | MS.gene064321:intron | 40.0% | |
| GTGACATGTGATGATCCAAA+AGG | + | chr6.1:76645452-76645471 | MS.gene064321:CDS | 40.0% | |
| TCCTCGCAATTATCTGCAAA+AGG | - | chr6.1:76647695-76647714 | None:intergenic | 40.0% | |
| TCGATTGAAGAGAAGACAAG+AGG | + | chr6.1:76645823-76645842 | MS.gene064321:CDS | 40.0% | |
| TGAACAACATGATTGAGTCG+TGG | + | chr6.1:76645675-76645694 | MS.gene064321:CDS | 40.0% | |
| TTTGCAGATAATTGCGAGGA+GGG | + | chr6.1:76647695-76647714 | MS.gene064321:intron | 40.0% | |
| ! | CCCTTATTGCTAACTTGTGT+AGG | + | chr6.1:76648094-76648113 | MS.gene064321:CDS | 40.0% |
| ! | GAAGGAACTCCTTTTGCTTT+TGG | - | chr6.1:76646559-76646578 | None:intergenic | 40.0% |
| ! | GCAAATCTCTTTGGGAAGTT+TGG | + | chr6.1:76648129-76648148 | MS.gene064321:CDS | 40.0% |
| ! | TTTTGCAGATAATTGCGAGG+AGG | + | chr6.1:76647694-76647713 | MS.gene064321:intron | 40.0% |
| !! | GATTGACTTGAGCTTGTAGA+AGG | - | chr6.1:76646061-76646080 | None:intergenic | 40.0% |
| ATCTTCTTTGCAGCTTGTGG+AGG | + | chr6.1:76645631-76645650 | MS.gene064321:CDS | 45.0% | |
| ATGATTGAGTCGTGGTCTAG+AGG | + | chr6.1:76645683-76645702 | MS.gene064321:CDS | 45.0% | |
| ATGGAATGTGGAACTGTGGT+TGG | + | chr6.1:76648278-76648297 | MS.gene064321:CDS | 45.0% | |
| ATTGCTGACACCGTCTGTAT+CGG | + | chr6.1:76647842-76647861 | MS.gene064321:CDS | 45.0% | |
| CAAAGCACAAGCACTTCTGA+AGG | + | chr6.1:76646010-76646029 | MS.gene064321:CDS | 45.0% | |
| CAAGGCTGTTGAAAGCAAGA+AGG | + | chr6.1:76646717-76646736 | MS.gene064321:CDS | 45.0% | |
| CCAAAAGGAGTTGTTGAGTG+TGG | + | chr6.1:76645467-76645486 | MS.gene064321:CDS | 45.0% | |
| CTCAAGATCAAGGCGAAATC+AGG | + | chr6.1:76646866-76646885 | MS.gene064321:CDS | 45.0% | |
| GAAAACTCTTCTCGAGGAAC+CGG | - | chr6.1:76646526-76646545 | None:intergenic | 45.0% | |
| GAAACAAGTTTCACTGACGC+TGG | - | chr6.1:76647807-76647826 | None:intergenic | 45.0% | |
| GGTTTCATGAGTACAATCGG+TGG | - | chr6.1:76646463-76646482 | None:intergenic | 45.0% | |
| GTGGAAGTCTGAGGAGATAT+AGG | + | chr6.1:76645486-76645505 | MS.gene064321:CDS | 45.0% | |
| GTGGCAAAAGCTCAAGATCA+AGG | + | chr6.1:76646856-76646875 | MS.gene064321:CDS | 45.0% | |
| TCCACAAGCTGCAAAGAAGA+TGG | - | chr6.1:76645632-76645651 | None:intergenic | 45.0% | |
| TCCATCTTCTTTGCAGCTTG+TGG | + | chr6.1:76645628-76645647 | MS.gene064321:CDS | 45.0% | |
| TTGTTGAGTGTGGAAGTCTG+AGG | + | chr6.1:76645477-76645496 | MS.gene064321:CDS | 45.0% | |
| ! | ATCGGTTTCACCGATACAGA+CGG | - | chr6.1:76647855-76647874 | None:intergenic | 45.0% |
| ! | CACAAGCACTTCTGAAGGAT+TGG | + | chr6.1:76646015-76646034 | MS.gene064321:CDS | 45.0% |
| ! | CCACACTCAACAACTCCTTT+TGG | - | chr6.1:76645470-76645489 | None:intergenic | 45.0% |
| ! | CCCTTTTGCAGATAATTGCG+AGG | + | chr6.1:76647691-76647710 | MS.gene064321:intron | 45.0% |
| ! | GTAGTCCTATTAGAGAGCAC+AGG | + | chr6.1:76646380-76646399 | MS.gene064321:CDS | 45.0% |
| ! | GTCTCTAGAGATGCTTCGTA+AGG | + | chr6.1:76645775-76645794 | MS.gene064321:CDS | 45.0% |
| ! | GTCTTTGTCTGGCTCGAAAT+CGG | - | chr6.1:76647873-76647892 | None:intergenic | 45.0% |
| ! | TGAACCTTCCCTTGGTTTGA+AGG | - | chr6.1:76646587-76646606 | None:intergenic | 45.0% |
| ! | TTGGTAGTTGAACCTTCCCT+TGG | - | chr6.1:76646595-76646614 | None:intergenic | 45.0% |
| !! | AGCTCAGAAGTGTCTTTGTC+TGG | - | chr6.1:76647884-76647903 | None:intergenic | 45.0% |
| !! | CTAAATTTTCGGCCGGCTTT+CGG | - | chr6.1:76645547-76645566 | None:intergenic | 45.0% |
| !! | CTTCAGAAGTGCTTGTGCTT+TGG | - | chr6.1:76646012-76646031 | None:intergenic | 45.0% |
| !! | TAAGACAAAGTGCCGAAAGC+CGG | + | chr6.1:76645532-76645551 | MS.gene064321:CDS | 45.0% |
| ACAAGTTTCACTGACGCTGG+TGG | - | chr6.1:76647804-76647823 | None:intergenic | 50.0% | |
| CGAAGCCTGTGCTCTCTAAT+AGG | - | chr6.1:76646388-76646407 | None:intergenic | 50.0% | |
| GAATGTGGAACTGTGGTTGG+AGG | + | chr6.1:76648281-76648300 | MS.gene064321:CDS | 50.0% | |
| GGATACACTTTGGCCCTGTT+TGG | + | chr6.1:76647387-76647406 | MS.gene064321:intron | 50.0% | |
| GGTGTGTCAATCTCGAACAC+AGG | - | chr6.1:76646262-76646281 | None:intergenic | 50.0% | |
| GTTCGAGATTGACACACCGA+AGG | + | chr6.1:76646264-76646283 | MS.gene064321:CDS | 50.0% | |
| GTTCGTAGAAACGTACGAGC+CGG | + | chr6.1:76646504-76646523 | MS.gene064321:CDS | 50.0% | |
| TCAATCCTCGACACACTTCG+CGG | - | chr6.1:76646916-76646935 | None:intergenic | 50.0% | |
| ! | GAAGCGCGTCAACGAGTTTT+TGG | + | chr6.1:76646675-76646694 | MS.gene064321:CDS | 50.0% |
| ! | TCTAGAGGTGTGAGGTACGA+TGG | + | chr6.1:76645698-76645717 | MS.gene064321:CDS | 50.0% |
| ACGAGCTTCCTCAGCAAGGA+TGG | - | chr6.1:76647777-76647796 | None:intergenic | 55.0% | |
| CAGCTTGTGGAGGTCTCTAG+AGG | + | chr6.1:76645641-76645660 | MS.gene064321:CDS | 55.0% | |
| TGGAACTGTGGTTGGAGGCA+TGG | + | chr6.1:76648286-76648305 | MS.gene064321:CDS | 55.0% | |
| TGTCACGAGCTTCCTCAGCA+AGG | - | chr6.1:76647781-76647800 | None:intergenic | 55.0% | |
| ! | AGTCGTGGTCTAGAGGTGTG+AGG | + | chr6.1:76645690-76645709 | MS.gene064321:CDS | 55.0% |
| GAAAGCCGCGAAGTGTGTCG+AGG | + | chr6.1:76646908-76646927 | MS.gene064321:CDS | 60.0% | |
| ACCTCGGCGCGCTTCGTATC+AGG | + | chr6.1:76646480-76646499 | MS.gene064321:CDS | 65.0% | |
| TCCTGATACGAAGCGCGCCG+AGG | - | chr6.1:76646484-76646503 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 76645437 | 76648399 | 76645437 | ID=MS.gene064321 |
| chr6.1 | mRNA | 76645437 | 76648399 | 76645437 | ID=MS.gene064321.t1;Parent=MS.gene064321 |
| chr6.1 | exon | 76645437 | 76647092 | 76645437 | ID=MS.gene064321.t1.exon1;Parent=MS.gene064321.t1 |
| chr6.1 | CDS | 76645437 | 76647092 | 76645437 | ID=cds.MS.gene064321.t1;Parent=MS.gene064321.t1 |
| chr6.1 | exon | 76647223 | 76647364 | 76647223 | ID=MS.gene064321.t1.exon2;Parent=MS.gene064321.t1 |
| chr6.1 | CDS | 76647223 | 76647364 | 76647223 | ID=cds.MS.gene064321.t1;Parent=MS.gene064321.t1 |
| chr6.1 | exon | 76647702 | 76648399 | 76647702 | ID=MS.gene064321.t1.exon3;Parent=MS.gene064321.t1 |
| chr6.1 | CDS | 76647702 | 76648399 | 76647702 | ID=cds.MS.gene064321.t1;Parent=MS.gene064321.t1 |
| Gene Sequence |
| Protein sequence |
