Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23893.t1 | RHN42290.1 | 98.9 | 363 | 4 | 0 | 1 | 363 | 1 | 363 | 4.40E-127 | 464.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23893.t1 | F4IP06 | 58.1 | 360 | 146 | 2 | 9 | 363 | 4 | 363 | 1.7e-71 | 271.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23893.t1 | A0A396GMM6 | 98.9 | 363 | 4 | 0 | 1 | 363 | 1 | 363 | 3.2e-127 | 464.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene23893 | 0.853591 | 2.16E-61 | -1.69E-46 |
| MS.gene049159 | MS.gene23893 | 0.854837 | 9.43E-62 | -1.69E-46 |
| MS.gene049190 | MS.gene23893 | 0.834592 | 2.74E-56 | -1.69E-46 |
| MS.gene049254 | MS.gene23893 | 0.816105 | 6.56E-52 | -1.69E-46 |
| MS.gene049404 | MS.gene23893 | 0.824975 | 6.03E-54 | -1.69E-46 |
| MS.gene049435 | MS.gene23893 | 0.818431 | 1.97E-52 | -1.69E-46 |
| MS.gene049501 | MS.gene23893 | 0.83436 | 3.14E-56 | -1.69E-46 |
| MS.gene049647 | MS.gene23893 | 0.802275 | 6.06E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene23893 | 0.801366 | 9.31E-49 | -1.69E-46 |
| MS.gene049808 | MS.gene23893 | 0.811898 | 5.56E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene23893 | 0.839709 | 1.35E-57 | -1.69E-46 |
| MS.gene050020 | MS.gene23893 | 0.801295 | 9.63E-49 | -1.69E-46 |
| MS.gene050156 | MS.gene23893 | 0.803167 | 3.97E-49 | -1.69E-46 |
| MS.gene050237 | MS.gene23893 | 0.809882 | 1.52E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene23893 | 0.815384 | 9.50E-52 | -1.69E-46 |
| MS.gene050551 | MS.gene23893 | 0.800193 | 1.62E-48 | -1.69E-46 |
| MS.gene050559 | MS.gene23893 | 0.802294 | 6.01E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene23893 | 0.810783 | 9.71E-51 | -1.69E-46 |
| MS.gene050689 | MS.gene23893 | 0.804598 | 2.00E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene23893 | 0.834487 | 2.91E-56 | -1.69E-46 |
| MS.gene050721 | MS.gene23893 | 0.829498 | 4.98E-55 | -1.69E-46 |
| MS.gene050724 | MS.gene23893 | 0.826846 | 2.17E-54 | -1.69E-46 |
| MS.gene050807 | MS.gene23893 | 0.825859 | 3.73E-54 | -1.69E-46 |
| MS.gene050844 | MS.gene23893 | 0.821713 | 3.49E-53 | -1.69E-46 |
| MS.gene050959 | MS.gene23893 | 0.819773 | 9.74E-53 | -1.69E-46 |
| MS.gene051102 | MS.gene23893 | 0.809954 | 1.47E-50 | -1.69E-46 |
| MS.gene051180 | MS.gene23893 | 0.81723 | 3.67E-52 | -1.69E-46 |
| MS.gene051198 | MS.gene23893 | 0.827054 | 1.93E-54 | -1.69E-46 |
| MS.gene051247 | MS.gene23893 | 0.834488 | 2.91E-56 | -1.69E-46 |
| MS.gene051265 | MS.gene23893 | 0.800955 | 1.13E-48 | -1.69E-46 |
| MS.gene051279 | MS.gene23893 | 0.817985 | 2.48E-52 | -1.69E-46 |
| MS.gene051328 | MS.gene23893 | 0.816323 | 5.87E-52 | -1.69E-46 |
| MS.gene051388 | MS.gene23893 | 0.812641 | 3.83E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene23893 | 0.817194 | 3.74E-52 | -1.69E-46 |
| MS.gene051719 | MS.gene23893 | 0.837302 | 5.63E-57 | -1.69E-46 |
| MS.gene051720 | MS.gene23893 | 0.827198 | 1.79E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene23893 | 0.851856 | 6.76E-61 | -1.69E-46 |
| MS.gene051800 | MS.gene23893 | 0.809801 | 1.58E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene23893 | 0.844486 | 7.34E-59 | -1.69E-46 |
| MS.gene052323 | MS.gene23893 | 0.846391 | 2.24E-59 | -1.69E-46 |
| MS.gene052384 | MS.gene23893 | 0.81612 | 6.51E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene23893 | 0.8461 | 2.69E-59 | -1.69E-46 |
| MS.gene052519 | MS.gene23893 | 0.817445 | 3.29E-52 | -1.69E-46 |
| MS.gene052561 | MS.gene23893 | 0.800681 | 1.29E-48 | -1.69E-46 |
| MS.gene052582 | MS.gene23893 | 0.812137 | 4.93E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene23893 | 0.811176 | 7.98E-51 | -1.69E-46 |
| MS.gene052611 | MS.gene23893 | 0.845981 | 2.89E-59 | -1.69E-46 |
| MS.gene052612 | MS.gene23893 | 0.80958 | 1.76E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene23893 | 0.833664 | 4.68E-56 | -1.69E-46 |
| MS.gene052773 | MS.gene23893 | 0.824926 | 6.19E-54 | -1.69E-46 |
| MS.gene052863 | MS.gene23893 | 0.841666 | 4.14E-58 | -1.69E-46 |
| MS.gene052896 | MS.gene23893 | 0.851982 | 6.22E-61 | -1.69E-46 |
| MS.gene053008 | MS.gene23893 | 0.832384 | 9.75E-56 | -1.69E-46 |
| MS.gene053079 | MS.gene23893 | 0.852727 | 3.82E-61 | -1.69E-46 |
| MS.gene053144 | MS.gene23893 | 0.84451 | 7.23E-59 | -1.69E-46 |
| MS.gene053221 | MS.gene23893 | 0.809883 | 1.52E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene23893 | 0.854504 | 1.18E-61 | -1.69E-46 |
| MS.gene053331 | MS.gene23893 | 0.801479 | 8.83E-49 | -1.69E-46 |
| MS.gene053565 | MS.gene23893 | 0.827196 | 1.79E-54 | -1.69E-46 |
| MS.gene053966 | MS.gene23893 | 0.800494 | 1.40E-48 | -1.69E-46 |
| MS.gene053998 | MS.gene23893 | 0.837638 | 4.62E-57 | -1.69E-46 |
| MS.gene054467 | MS.gene23893 | 0.813698 | 2.24E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene23893 | 0.809563 | 1.78E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene23893 | 0.854028 | 1.62E-61 | -1.69E-46 |
| MS.gene05458 | MS.gene23893 | 0.806676 | 7.33E-50 | -1.69E-46 |
| MS.gene05462 | MS.gene23893 | 0.837528 | 4.93E-57 | -1.69E-46 |
| MS.gene054651 | MS.gene23893 | 0.825422 | 4.73E-54 | -1.69E-46 |
| MS.gene054775 | MS.gene23893 | 0.805235 | 1.47E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene23893 | 0.808906 | 2.46E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene23893 | 0.827978 | 1.16E-54 | -1.69E-46 |
| MS.gene055466 | MS.gene23893 | 0.833641 | 4.75E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene23893 | 0.815392 | 9.46E-52 | -1.69E-46 |
| MS.gene055469 | MS.gene23893 | 0.813352 | 2.67E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene23893 | 0.864102 | 1.55E-64 | -1.69E-46 |
| MS.gene055513 | MS.gene23893 | 0.800205 | 1.61E-48 | -1.69E-46 |
| MS.gene055537 | MS.gene23893 | 0.807652 | 4.55E-50 | -1.69E-46 |
| MS.gene055580 | MS.gene23893 | -0.812634 | 3.84E-51 | -1.69E-46 |
| MS.gene055608 | MS.gene23893 | 0.808258 | 3.38E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene23893 | 0.803542 | 3.32E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene23893 | 0.826443 | 2.71E-54 | -1.69E-46 |
| MS.gene055890 | MS.gene23893 | 0.836808 | 7.53E-57 | -1.69E-46 |
| MS.gene055891 | MS.gene23893 | 0.827858 | 1.24E-54 | -1.69E-46 |
| MS.gene055926 | MS.gene23893 | 0.821587 | 3.73E-53 | -1.69E-46 |
| MS.gene05604 | MS.gene23893 | 0.804955 | 1.68E-49 | -1.69E-46 |
| MS.gene056050 | MS.gene23893 | 0.832943 | 7.08E-56 | -1.69E-46 |
| MS.gene056173 | MS.gene23893 | 0.834481 | 2.92E-56 | -1.69E-46 |
| MS.gene056174 | MS.gene23893 | 0.804421 | 2.18E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene23893 | 0.82186 | 3.23E-53 | -1.69E-46 |
| MS.gene056366 | MS.gene23893 | 0.836397 | 9.58E-57 | -1.69E-46 |
| MS.gene056507 | MS.gene23893 | 0.826305 | 2.92E-54 | -1.69E-46 |
| MS.gene056553 | MS.gene23893 | 0.845973 | 2.91E-59 | -1.69E-46 |
| MS.gene056643 | MS.gene23893 | 0.808607 | 2.85E-50 | -1.69E-46 |
| MS.gene056760 | MS.gene23893 | 0.800205 | 1.61E-48 | -1.69E-46 |
| MS.gene05686 | MS.gene23893 | 0.808146 | 3.57E-50 | -1.69E-46 |
| MS.gene057314 | MS.gene23893 | 0.835903 | 1.28E-56 | -1.69E-46 |
| MS.gene057444 | MS.gene23893 | 0.819516 | 1.11E-52 | -1.69E-46 |
| MS.gene057598 | MS.gene23893 | 0.811791 | 5.87E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene23893 | 0.804376 | 2.22E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene23893 | 0.841517 | 4.53E-58 | -1.69E-46 |
| MS.gene057915 | MS.gene23893 | 0.848087 | 7.66E-60 | -1.69E-46 |
| MS.gene058009 | MS.gene23893 | 0.818595 | 1.81E-52 | -1.69E-46 |
| MS.gene058010 | MS.gene23893 | 0.841349 | 5.02E-58 | -1.69E-46 |
| MS.gene05847 | MS.gene23893 | 0.805338 | 1.40E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene23893 | 0.836206 | 1.07E-56 | -1.69E-46 |
| MS.gene058636 | MS.gene23893 | 0.819458 | 1.15E-52 | -1.69E-46 |
| MS.gene058829 | MS.gene23893 | 0.829051 | 6.39E-55 | -1.69E-46 |
| MS.gene058979 | MS.gene23893 | 0.846408 | 2.21E-59 | -1.69E-46 |
| MS.gene059015 | MS.gene23893 | 0.805013 | 1.64E-49 | -1.69E-46 |
| MS.gene059154 | MS.gene23893 | 0.807124 | 5.89E-50 | -1.69E-46 |
| MS.gene059570 | MS.gene23893 | 0.836414 | 9.49E-57 | -1.69E-46 |
| MS.gene059625 | MS.gene23893 | 0.832249 | 1.05E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene23893 | 0.814428 | 1.55E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene23893 | 0.832326 | 1.01E-55 | -1.69E-46 |
| MS.gene05978 | MS.gene23893 | 0.807619 | 4.63E-50 | -1.69E-46 |
| MS.gene059789 | MS.gene23893 | 0.804033 | 2.62E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene23893 | 0.816031 | 6.82E-52 | -1.69E-46 |
| MS.gene059937 | MS.gene23893 | 0.830001 | 3.75E-55 | -1.69E-46 |
| MS.gene060167 | MS.gene23893 | 0.802373 | 5.78E-49 | -1.69E-46 |
| MS.gene060310 | MS.gene23893 | 0.803934 | 2.75E-49 | -1.69E-46 |
| MS.gene060312 | MS.gene23893 | 0.800942 | 1.14E-48 | -1.69E-46 |
| MS.gene060322 | MS.gene23893 | 0.819661 | 1.03E-52 | -1.69E-46 |
| MS.gene060355 | MS.gene23893 | 0.807017 | 6.21E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene23893 | 0.811408 | 7.11E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene23893 | 0.85156 | 8.20E-61 | -1.69E-46 |
| MS.gene060637 | MS.gene23893 | 0.80842 | 3.12E-50 | -1.69E-46 |
| MS.gene060918 | MS.gene23893 | 0.803764 | 2.98E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene23893 | 0.812115 | 4.99E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23893.t1 | AT2G36740 | 59.710 | 345 | 130 | 3 | 14 | 351 | 9 | 351 | 1.77e-129 | 375 |
| MS.gene23893.t1 | AT2G36740 | 62.126 | 301 | 105 | 3 | 10 | 303 | 5 | 303 | 2.01e-116 | 341 |
Find 62 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCATCATTATCATCAATTT+TGG | 0.077559 | 4.4:-18383390 | None:intergenic |
| GAAGAAAATCTTATCTAATT+TGG | 0.115613 | 4.4:+18383358 | MS.gene23893:CDS |
| GGCTTATATGATTCAGTTTC+TGG | 0.127458 | 4.4:+18387081 | MS.gene23893:CDS |
| AATTATGAACTTGAGGAATT+TGG | 0.176156 | 4.4:+18384364 | MS.gene23893:CDS |
| TCGCCTTTCTTCCTTATTAC+TGG | 0.196750 | 4.4:-18384181 | None:intergenic |
| TATGATTCAGTTTCTGGATA+TGG | 0.207235 | 4.4:+18387087 | MS.gene23893:CDS |
| GTGCATAAAACTGTCTTTAA+TGG | 0.216607 | 4.4:+18384431 | MS.gene23893:CDS |
| CCGCGATTTCAGCTTCTTCT+TGG | 0.241131 | 4.4:-18383107 | None:intergenic |
| TTCAACAAGATGAATTGTTC+TGG | 0.284399 | 4.4:+18383043 | MS.gene23893:CDS |
| CAACCTGTTTGCGTTATTAC+TGG | 0.293930 | 4.4:+18385942 | MS.gene23893:CDS |
| CTCTAGAAAAGAAACGAATA+TGG | 0.304931 | 4.4:+18387056 | MS.gene23893:CDS |
| GGCTGTTCTTCATCGGGTTC+AGG | 0.307025 | 4.4:-18383254 | None:intergenic |
| GCGAACAATGACGGAAGTTC+TGG | 0.369171 | 4.4:-18383486 | None:intergenic |
| ACAATGGAGGAAAAGAATTC+AGG | 0.384881 | 4.4:+18382931 | None:intergenic |
| ATAACGCAAACAGGTTGTTC+TGG | 0.392827 | 4.4:-18385936 | None:intergenic |
| CGTATTTGGAGTTTACTAAA+GGG | 0.400482 | 4.4:+18384573 | MS.gene23893:CDS |
| GCGTATGGCAGCCCAGTCTT+TGG | 0.402777 | 4.4:-18386144 | None:intergenic |
| GATATTGGAGATAACCTTGT+AGG | 0.403997 | 4.4:-18383549 | None:intergenic |
| ATGCGAAGGAGGTAATGATT+AGG | 0.411108 | 4.4:+18383456 | MS.gene23893:CDS |
| AGATGAATTGTTCTGGGGTC+AGG | 0.416421 | 4.4:+18383050 | MS.gene23893:CDS |
| ATACACTACATATCACAAAA+TGG | 0.416807 | 4.4:+18384461 | MS.gene23893:CDS |
| AAGAAGCGATTGGTATATCC+TGG | 0.422746 | 4.4:+18383305 | MS.gene23893:CDS |
| AGTTACGTCTTGGTCGAAAT+CGG | 0.439480 | 4.4:-18383142 | None:intergenic |
| TCAACAAGATGAATTGTTCT+GGG | 0.454323 | 4.4:+18383044 | MS.gene23893:CDS |
| TTAGCCAATGTCGCCTTCCC+AGG | 0.459198 | 4.4:-18383323 | None:intergenic |
| TCGTATTTGGAGTTTACTAA+AGG | 0.472369 | 4.4:+18384572 | MS.gene23893:CDS |
| CCTCCTTCGCATCATCGTCC+TGG | 0.473697 | 4.4:-18383445 | None:intergenic |
| CACATGATCGGTCCTTGGCT+CGG | 0.478772 | 4.4:+18387160 | MS.gene23893:CDS |
| GAATGGCTTCTCTTTCAGCT+TGG | 0.491571 | 4.4:-18383508 | None:intergenic |
| GAGATCGAATCTTCTACTGC+TGG | 0.496740 | 4.4:+18382963 | MS.gene23893:CDS |
| AAACCAGTAATAACGCAAAC+AGG | 0.498211 | 4.4:-18385945 | None:intergenic |
| AAGAAAGGCTCTTACTTGGC+AGG | 0.501328 | 4.4:-18385969 | None:intergenic |
| TTCAGCTTGGCGAACAATGA+CGG | 0.524822 | 4.4:-18383495 | None:intergenic |
| ACATCCACATGATCGGTCCT+TGG | 0.525200 | 4.4:+18387155 | MS.gene23893:CDS |
| AGGTACCGTGATCCAAAGAC+TGG | 0.525622 | 4.4:+18386132 | MS.gene23893:intron |
| GAATCTTCATCCTCAAAAGT+AGG | 0.528439 | 4.4:-18387195 | None:intergenic |
| CTGCAGAAATTATGAACTTG+AGG | 0.529753 | 4.4:+18384357 | MS.gene23893:intron |
| TGCTTTGAGAGCTTCGCGAA+TGG | 0.533499 | 4.4:-18383525 | None:intergenic |
| TCTAGAAAAGAAACGAATAT+GGG | 0.542033 | 4.4:+18387057 | MS.gene23893:CDS |
| ATATCCTGGGAAGGCGACAT+TGG | 0.555043 | 4.4:+18383319 | MS.gene23893:CDS |
| AAAATATACATCCACATGAT+CGG | 0.556585 | 4.4:+18387148 | MS.gene23893:CDS |
| AAAATTGATGATAATGATGA+CGG | 0.559093 | 4.4:+18383392 | MS.gene23893:CDS |
| CAGCCAGTAATAAGGAAGAA+AGG | 0.573774 | 4.4:+18384178 | MS.gene23893:intron |
| AGCTCTCAAAGCAACCTACA+AGG | 0.574053 | 4.4:+18383535 | MS.gene23893:CDS |
| CGTGCATCTCGAGCGACAAG+AGG | 0.584790 | 4.4:+18382988 | MS.gene23893:CDS |
| AGAAGCGATTGGTATATCCT+GGG | 0.596937 | 4.4:+18383306 | MS.gene23893:CDS |
| GTATTTGGAGTTTACTAAAG+GGG | 0.598121 | 4.4:+18384574 | MS.gene23893:CDS |
| CGCACATTCTTGAGACGTTG+TGG | 0.601571 | 4.4:-18384618 | None:intergenic |
| CGAGCCAAGGACCGATCATG+TGG | 0.604117 | 4.4:-18387159 | None:intergenic |
| GGAGAAGAAAATGTCACAAG+AGG | 0.609231 | 4.4:+18384204 | MS.gene23893:CDS |
| TGTGATATGTAGTGTATCTG+TGG | 0.609479 | 4.4:-18384455 | None:intergenic |
| GCAGCCCAGTCTTTGGATCA+CGG | 0.611548 | 4.4:-18386137 | None:intergenic |
| CAACCAGGACGATGATGCGA+AGG | 0.612565 | 4.4:+18383442 | MS.gene23893:CDS |
| AAACAACAAGAACAACAACC+AGG | 0.612812 | 4.4:+18383427 | MS.gene23893:CDS |
| CCAGGACGATGATGCGAAGG+AGG | 0.615528 | 4.4:+18383445 | MS.gene23893:CDS |
| GCGATTGGTATATCCTGGGA+AGG | 0.627485 | 4.4:+18383310 | MS.gene23893:CDS |
| AGAAAAGAAACGAATATGGG+AGG | 0.647868 | 4.4:+18387060 | MS.gene23893:CDS |
| AATTCTACGAAACCGAGCCA+AGG | 0.655235 | 4.4:-18387172 | None:intergenic |
| CAACAAGATGAATTGTTCTG+GGG | 0.658361 | 4.4:+18383045 | MS.gene23893:CDS |
| CCAAGAAGAAGCTGAAATCG+CGG | 0.669602 | 4.4:+18383107 | MS.gene23893:CDS |
| AGTAATAAGGAAGAAAGGCG+AGG | 0.677909 | 4.4:+18384183 | MS.gene23893:CDS |
| GGTACCGTGATCCAAAGACT+GGG | 0.697285 | 4.4:+18386133 | MS.gene23893:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGTTTTTTTTCTTTTTTT+TGG | + | chr4.4:18384153-18384172 | MS.gene23893:intron | 10.0% |
| !! | TACTGTTATAAAAGAATATT+AGG | - | chr4.4:18386256-18386275 | None:intergenic | 15.0% |
| !! | TTATAAGAACAATTATAACT+AGG | - | chr4.4:18386770-18386789 | None:intergenic | 15.0% |
| !! | TTCAATACAAAAAAAATTGA+CGG | + | chr4.4:18385581-18385600 | MS.gene23893:intron | 15.0% |
| !!! | ATCATAAAAAGTTATCTTTT+TGG | - | chr4.4:18386324-18386343 | None:intergenic | 15.0% |
| !!! | CTAACTAATTTTTGTAAATT+CGG | - | chr4.4:18384986-18385005 | None:intergenic | 15.0% |
| !!! | GTTTAATTAGTTTAAAGTTA+GGG | + | chr4.4:18385603-18385622 | MS.gene23893:intron | 15.0% |
| !!! | TTTAATCTATTGTTGTTATA+AGG | - | chr4.4:18383797-18383816 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAATAGTTCAGC+CGG | + | chr4.4:18386046-18386065 | MS.gene23893:intron | 20.0% |
| !! | AAATATAGTGCTAGAATAAA+AGG | - | chr4.4:18384646-18384665 | None:intergenic | 20.0% |
| !! | AACTTAAATGCTTATCATAT+AGG | - | chr4.4:18384074-18384093 | None:intergenic | 20.0% |
| !! | AATATAGTGCTAGAATAAAA+GGG | - | chr4.4:18384645-18384664 | None:intergenic | 20.0% |
| !! | CGAATTTACAAAAATTAGTT+AGG | + | chr4.4:18384984-18385003 | MS.gene23893:intron | 20.0% |
| !! | CTTATTTCAATAATCTTTCT+GGG | - | chr4.4:18383869-18383888 | None:intergenic | 20.0% |
| !! | GAAGAAAATCTTATCTAATT+TGG | + | chr4.4:18383358-18383377 | MS.gene23893:CDS | 20.0% |
| !! | TAATTCAATAACATCATAGT+GGG | - | chr4.4:18386437-18386456 | None:intergenic | 20.0% |
| !! | TACAAAAATTAGTTAGGTTT+AGG | + | chr4.4:18384990-18385009 | MS.gene23893:intron | 20.0% |
| !! | TTATTTCAATAATCTTTCTG+GGG | - | chr4.4:18383868-18383887 | None:intergenic | 20.0% |
| !!! | AAAATTGATGATAATGATGA+CGG | + | chr4.4:18383392-18383411 | MS.gene23893:CDS | 20.0% |
| !!! | AAATATAAAAGCATTCATGT+GGG | + | chr4.4:18386888-18386907 | MS.gene23893:intron | 20.0% |
| !!! | ACTAAGTGTTTTAGATAATT+AGG | + | chr4.4:18385274-18385293 | MS.gene23893:intron | 20.0% |
| !!! | ATTAGTTTATAGACAATAAC+TGG | + | chr4.4:18384801-18384820 | MS.gene23893:intron | 20.0% |
| !!! | ATTTTTGTAAATTCGGTATT+TGG | - | chr4.4:18384979-18384998 | None:intergenic | 20.0% |
| !!! | CTAAGTGTTTTAGATAATTA+GGG | + | chr4.4:18385275-18385294 | MS.gene23893:intron | 20.0% |
| !!! | CTTGTAATTGATTTTAATTG+GGG | + | chr4.4:18387000-18387019 | MS.gene23893:intron | 20.0% |
| !!! | CTTTTAAAATAATTCGACAA+CGG | + | chr4.4:18386178-18386197 | MS.gene23893:CDS | 20.0% |
| !!! | GCTTGTAATTGATTTTAATT+GGG | + | chr4.4:18386999-18387018 | MS.gene23893:intron | 20.0% |
| !!! | GGTTTAATTAGTTTAAAGTT+AGG | + | chr4.4:18385602-18385621 | MS.gene23893:intron | 20.0% |
| !!! | GTAAAACTTTTTCTACTTAA+AGG | - | chr4.4:18385394-18385413 | None:intergenic | 20.0% |
| !!! | TAAATATAAAAGCATTCATG+TGG | + | chr4.4:18386887-18386906 | MS.gene23893:intron | 20.0% |
| !!! | TCATCATTATCATCAATTTT+GGG | - | chr4.4:18383392-18383411 | None:intergenic | 20.0% |
| !!! | TGCTTGTAATTGATTTTAAT+TGG | + | chr4.4:18386998-18387017 | MS.gene23893:intron | 20.0% |
| !!! | TTCATGTTATTATCAGTTTT+TGG | + | chr4.4:18383607-18383626 | MS.gene23893:intron | 20.0% |
| !!! | TTTATTCTAGCACTATATTT+TGG | + | chr4.4:18384646-18384665 | MS.gene23893:intron | 20.0% |
| ! | AAAATATACATCCACATGAT+CGG | + | chr4.4:18387148-18387167 | MS.gene23893:CDS | 25.0% |
| ! | AAATTAGTTAGGTTTAGGAA+AGG | + | chr4.4:18384995-18385014 | MS.gene23893:intron | 25.0% |
| ! | AAGCATAATTGAAACATCAA+AGG | - | chr4.4:18384331-18384350 | None:intergenic | 25.0% |
| ! | AATAAGCTTATAACAGCTTA+TGG | + | chr4.4:18383883-18383902 | MS.gene23893:intron | 25.0% |
| ! | AATGAATAAAAAGAAGCGAT+TGG | + | chr4.4:18383295-18383314 | MS.gene23893:CDS | 25.0% |
| ! | AATGACGAAACAATTTCTTT+GGG | - | chr4.4:18384745-18384764 | None:intergenic | 25.0% |
| ! | AATTATGAACTTGAGGAATT+TGG | + | chr4.4:18384364-18384383 | MS.gene23893:CDS | 25.0% |
| ! | AATTCAATAACATCATAGTG+GGG | - | chr4.4:18386436-18386455 | None:intergenic | 25.0% |
| ! | ACAGATTGCTATATGTAAAA+TGG | - | chr4.4:18384535-18384554 | None:intergenic | 25.0% |
| ! | AGGATTAAACACAATTTCAT+GGG | - | chr4.4:18386750-18386769 | None:intergenic | 25.0% |
| ! | ATACACTACATATCACAAAA+TGG | + | chr4.4:18384461-18384480 | MS.gene23893:CDS | 25.0% |
| ! | ATGTAATATATTCCGTTTCT+TGG | + | chr4.4:18384688-18384707 | MS.gene23893:intron | 25.0% |
| ! | ATGTATAGTAAACAATGAGT+AGG | + | chr4.4:18385037-18385056 | MS.gene23893:intron | 25.0% |
| ! | CTTAACAGAATCTATGTAAA+TGG | + | chr4.4:18383975-18383994 | MS.gene23893:intron | 25.0% |
| ! | GAATTCGTTAGAGAAAAAAT+TGG | + | chr4.4:18385552-18385571 | MS.gene23893:intron | 25.0% |
| ! | GCTTATTTCAATAATCTTTC+TGG | - | chr4.4:18383870-18383889 | None:intergenic | 25.0% |
| ! | GTAATTCAATAACATCATAG+TGG | - | chr4.4:18386438-18386457 | None:intergenic | 25.0% |
| ! | TAAGATTTGCAACTATGTAT+GGG | + | chr4.4:18385424-18385443 | MS.gene23893:intron | 25.0% |
| ! | TACATAGATTCTGTTAAGAT+TGG | - | chr4.4:18383973-18383992 | None:intergenic | 25.0% |
| ! | TAGGATTAAACACAATTTCA+TGG | - | chr4.4:18386751-18386770 | None:intergenic | 25.0% |
| ! | TCTAGAAAAGAAACGAATAT+GGG | + | chr4.4:18387057-18387076 | MS.gene23893:CDS | 25.0% |
| ! | TGAATCACAGAAAAAGATAT+TGG | - | chr4.4:18383567-18383586 | None:intergenic | 25.0% |
| ! | TTGTACCTCAAATATTGTTA+AGG | + | chr4.4:18386093-18386112 | MS.gene23893:intron | 25.0% |
| !! | ATCTTTTTCTGTGATTCATT+AGG | + | chr4.4:18383569-18383588 | MS.gene23893:intron | 25.0% |
| !! | GTCATCATTATCATCAATTT+TGG | - | chr4.4:18383393-18383412 | None:intergenic | 25.0% |
| !! | TAACAATATTTGAGGTACAA+TGG | - | chr4.4:18386093-18386112 | None:intergenic | 25.0% |
| !! | TAATTAGTGTGAATGAGTTT+TGG | - | chr4.4:18383174-18383193 | None:intergenic | 25.0% |
| !! | TAATTCTTCTTGATTTTCTC+AGG | + | chr4.4:18383229-18383248 | MS.gene23893:intron | 25.0% |
| !! | TATCTAAAACACTTAGTTGT+GGG | - | chr4.4:18385271-18385290 | None:intergenic | 25.0% |
| !! | TCTTTTTCTGTGATTCATTA+GGG | + | chr4.4:18383570-18383589 | MS.gene23893:intron | 25.0% |
| !! | TGATGTTTCAATTATGCTTT+TGG | + | chr4.4:18384332-18384351 | MS.gene23893:intron | 25.0% |
| !! | TTATCTAAAACACTTAGTTG+TGG | - | chr4.4:18385272-18385291 | None:intergenic | 25.0% |
| !!! | AGCAATCTGTTTATTTTTTC+AGG | + | chr4.4:18384545-18384564 | MS.gene23893:intron | 25.0% |
| AAGTTTACTTGCAATCAAGA+AGG | - | chr4.4:18386209-18386228 | None:intergenic | 30.0% | |
| ACATAGTTGCAAATCTTACT+AGG | - | chr4.4:18385422-18385441 | None:intergenic | 30.0% | |
| ACTACATATCACAAAATGGT+TGG | + | chr4.4:18384465-18384484 | MS.gene23893:intron | 30.0% | |
| ATAGTAAACAATGAGTAGGA+AGG | + | chr4.4:18385041-18385060 | MS.gene23893:intron | 30.0% | |
| ATTGTTGGATAGCTAATGAT+GGG | + | chr4.4:18386633-18386652 | MS.gene23893:intron | 30.0% | |
| CAAAGAAATTGTTTCGTCAT+TGG | + | chr4.4:18384744-18384763 | MS.gene23893:intron | 30.0% | |
| CAAGTAAACTTTCTCTGAAT+GGG | + | chr4.4:18386218-18386237 | MS.gene23893:intron | 30.0% | |
| CAATGACGAAACAATTTCTT+TGG | - | chr4.4:18384746-18384765 | None:intergenic | 30.0% | |
| CTATCTTGAAAAACAGCTTA+TGG | - | chr4.4:18383738-18383757 | None:intergenic | 30.0% | |
| GAAAACTAAAACAAACAAGC+AGG | - | chr4.4:18384301-18384320 | None:intergenic | 30.0% | |
| GAACTCCTTAACAATATTTG+AGG | - | chr4.4:18386101-18386120 | None:intergenic | 30.0% | |
| GAACTTTATGAACCAAGAAA+CGG | - | chr4.4:18384703-18384722 | None:intergenic | 30.0% | |
| GGTCAATATTAGAATACACT+TGG | + | chr4.4:18384253-18384272 | MS.gene23893:intron | 30.0% | |
| GTAAGATTTGCAACTATGTA+TGG | + | chr4.4:18385423-18385442 | MS.gene23893:intron | 30.0% | |
| GTGCATAAAACTGTCTTTAA+TGG | + | chr4.4:18384431-18384450 | MS.gene23893:CDS | 30.0% | |
| GTTAATGTGATTCACTTCAT+AGG | + | chr4.4:18386277-18386296 | MS.gene23893:intron | 30.0% | |
| TAGACAATAACTGGAATAAC+TGG | + | chr4.4:18384810-18384829 | MS.gene23893:intron | 30.0% | |
| TATTGTTGGATAGCTAATGA+TGG | + | chr4.4:18386632-18386651 | MS.gene23893:intron | 30.0% | |
| TCAACAAGATGAATTGTTCT+GGG | + | chr4.4:18383044-18383063 | MS.gene23893:CDS | 30.0% | |
| TCACATCAATACATCAAGAA+AGG | - | chr4.4:18385987-18386006 | None:intergenic | 30.0% | |
| TCTGAAAAGCTAGAGAAATT+GGG | - | chr4.4:18386691-18386710 | None:intergenic | 30.0% | |
| TGACATTATAACAAGTGCTA+AGG | + | chr4.4:18384903-18384922 | MS.gene23893:intron | 30.0% | |
| TTATAATCCAACTGAACTAC+TGG | - | chr4.4:18386027-18386046 | None:intergenic | 30.0% | |
| TTCAACAAGATGAATTGTTC+TGG | + | chr4.4:18383043-18383062 | MS.gene23893:CDS | 30.0% | |
| ! | AACATTTTCAGACCATAATC+AGG | - | chr4.4:18384139-18384158 | None:intergenic | 30.0% |
| ! | ATTCTTTCATCATCGTTTTG+TGG | - | chr4.4:18383278-18383297 | None:intergenic | 30.0% |
| ! | CGTATTTGGAGTTTACTAAA+GGG | + | chr4.4:18384573-18384592 | MS.gene23893:CDS | 30.0% |
| ! | CTCTAGAAAAGAAACGAATA+TGG | + | chr4.4:18387056-18387075 | MS.gene23893:CDS | 30.0% |
| ! | GCAGTTGAACATAAATGTTT+TGG | + | chr4.4:18384927-18384946 | MS.gene23893:intron | 30.0% |
| ! | GTATTTGGAGTTTACTAAAG+GGG | + | chr4.4:18384574-18384593 | MS.gene23893:CDS | 30.0% |
| ! | TACATAGAATTTTCTGATGC+CGG | - | chr4.4:18385798-18385817 | None:intergenic | 30.0% |
| ! | TATGATTCAGTTTCTGGATA+TGG | + | chr4.4:18387087-18387106 | MS.gene23893:CDS | 30.0% |
| ! | TCATTATCATCAATTTTGGG+AGG | - | chr4.4:18383389-18383408 | None:intergenic | 30.0% |
| ! | TCGTATTTGGAGTTTACTAA+AGG | + | chr4.4:18384572-18384591 | MS.gene23893:CDS | 30.0% |
| ! | TGAGAAGAATTTAAAGTACC+CGG | + | chr4.4:18385776-18385795 | MS.gene23893:intron | 30.0% |
| ! | TTCAGATGGTATCATTTTAC+TGG | + | chr4.4:18384870-18384889 | MS.gene23893:intron | 30.0% |
| !! | ATGTTGGTAACTCTTACAAA+TGG | + | chr4.4:18385709-18385728 | MS.gene23893:intron | 30.0% |
| !! | TGCATTTAGTTTGGTTGTAT+TGG | + | chr4.4:18384503-18384522 | MS.gene23893:intron | 30.0% |
| !! | TGTTGGTAACTCTTACAAAT+GGG | + | chr4.4:18385710-18385729 | MS.gene23893:intron | 30.0% |
| !!! | ATAAATGTTTTGGAGACCAA+GGG | + | chr4.4:18384937-18384956 | MS.gene23893:intron | 30.0% |
| !!! | TTTTTCAGGTTGTTCGTATT+TGG | + | chr4.4:18384559-18384578 | MS.gene23893:intron | 30.0% |
| AAACAACAAGAACAACAACC+AGG | + | chr4.4:18383427-18383446 | MS.gene23893:CDS | 35.0% | |
| AAACCAGTAATAACGCAAAC+AGG | - | chr4.4:18385948-18385967 | None:intergenic | 35.0% | |
| AAGTTAGGGTAGCTACTATA+TGG | + | chr4.4:18385617-18385636 | MS.gene23893:intron | 35.0% | |
| AATAACTGGACACATTCCAA+AGG | + | chr4.4:18384824-18384843 | MS.gene23893:intron | 35.0% | |
| ACAACCAAACTAAATGCACA+TGG | - | chr4.4:18384501-18384520 | None:intergenic | 35.0% | |
| AGAAAAGAAACGAATATGGG+AGG | + | chr4.4:18387060-18387079 | MS.gene23893:CDS | 35.0% | |
| AGATAGCTTATGCTTCTGTT+TGG | + | chr4.4:18383752-18383771 | MS.gene23893:intron | 35.0% | |
| AGGATGAAGATTCTGACTAA+AGG | + | chr4.4:18387205-18387224 | MS.gene23893:CDS | 35.0% | |
| ATAATATGCGAGGTTGAAGA+TGG | + | chr4.4:18385685-18385704 | MS.gene23893:intron | 35.0% | |
| ATAGACAAAGGGAAATCTTC+CGG | - | chr4.4:18386068-18386087 | None:intergenic | 35.0% | |
| ATGTATGGGTCAGAAATGTT+GGG | + | chr4.4:18385438-18385457 | MS.gene23893:intron | 35.0% | |
| CAACAAGATGAATTGTTCTG+GGG | + | chr4.4:18383045-18383064 | MS.gene23893:CDS | 35.0% | |
| CATTCCATGTGCATTTAGTT+TGG | + | chr4.4:18384494-18384513 | MS.gene23893:intron | 35.0% | |
| CTGCAGAAATTATGAACTTG+AGG | + | chr4.4:18384357-18384376 | MS.gene23893:intron | 35.0% | |
| CTTAAGATGACATGGTTCAT+TGG | - | chr4.4:18386514-18386533 | None:intergenic | 35.0% | |
| CTTATAACAGCTTATGGACA+TGG | + | chr4.4:18383889-18383908 | MS.gene23893:intron | 35.0% | |
| CTTTCCTTCTTAAGATGACA+TGG | - | chr4.4:18386522-18386541 | None:intergenic | 35.0% | |
| GAATCTTCATCCTCAAAAGT+AGG | - | chr4.4:18387198-18387217 | None:intergenic | 35.0% | |
| GATATTGGAGATAACCTTGT+AGG | - | chr4.4:18383552-18383571 | None:intergenic | 35.0% | |
| GCAAGTAAACTTTCTCTGAA+TGG | + | chr4.4:18386217-18386236 | MS.gene23893:intron | 35.0% | |
| GCAATCATGAGCATAAATGA+TGG | + | chr4.4:18385470-18385489 | MS.gene23893:intron | 35.0% | |
| GGCTTATATGATTCAGTTTC+TGG | + | chr4.4:18387081-18387100 | MS.gene23893:CDS | 35.0% | |
| GGGTCTATCTTACAAAAGAA+AGG | + | chr4.4:18385295-18385314 | MS.gene23893:intron | 35.0% | |
| GGTTTGATCTAATGTTCCAT+AGG | + | chr4.4:18386388-18386407 | MS.gene23893:intron | 35.0% | |
| GTAACTCTTACAAATGGGTA+GGG | + | chr4.4:18385715-18385734 | MS.gene23893:intron | 35.0% | |
| GTACAATGGCTATAGACAAA+GGG | - | chr4.4:18386079-18386098 | None:intergenic | 35.0% | |
| GTTCTTCTAAACAATATCCC+AGG | + | chr4.4:18383917-18383936 | MS.gene23893:intron | 35.0% | |
| TAAACACAATTTCATGGGTG+TGG | - | chr4.4:18386745-18386764 | None:intergenic | 35.0% | |
| TAACTCTTACAAATGGGTAG+GGG | + | chr4.4:18385716-18385735 | MS.gene23893:intron | 35.0% | |
| TATGTATGGGTCAGAAATGT+TGG | + | chr4.4:18385437-18385456 | MS.gene23893:intron | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr4.4:18385166-18385185 | None:intergenic | 35.0% | |
| TGAACCATGTCATCTTAAGA+AGG | + | chr4.4:18386515-18386534 | MS.gene23893:intron | 35.0% | |
| TGAGCATAAATGATGGTTGT+AGG | + | chr4.4:18385477-18385496 | MS.gene23893:intron | 35.0% | |
| TGTATTTGTGCTCATCTAGT+GGG | + | chr4.4:18383658-18383677 | MS.gene23893:intron | 35.0% | |
| TGTGATATGTAGTGTATCTG+TGG | - | chr4.4:18384458-18384477 | None:intergenic | 35.0% | |
| TTAGTTAGGTTTAGGAAAGG+AGG | + | chr4.4:18384998-18385017 | MS.gene23893:intron | 35.0% | |
| TTCAACCTCGCATATTATGA+AGG | - | chr4.4:18385683-18385702 | None:intergenic | 35.0% | |
| TTCCAAACAACACCTGATTA+TGG | + | chr4.4:18384124-18384143 | MS.gene23893:intron | 35.0% | |
| TTGAAGTAGAGAAATGCTTC+AGG | + | chr4.4:18385356-18385375 | MS.gene23893:intron | 35.0% | |
| TTGATCTAATGTTCCATAGG+AGG | + | chr4.4:18386391-18386410 | MS.gene23893:intron | 35.0% | |
| TTGATTACCAGTAGTTCAGT+TGG | + | chr4.4:18386017-18386036 | MS.gene23893:intron | 35.0% | |
| ! | AAAGCTTCTTTTGTAGCGTA+TGG | - | chr4.4:18386162-18386181 | None:intergenic | 35.0% |
| ! | ACATAGAATTTTCTGATGCC+GGG | - | chr4.4:18385797-18385816 | None:intergenic | 35.0% |
| ! | AGCATTTAAGTTAGAAGCAC+TGG | + | chr4.4:18384082-18384101 | MS.gene23893:intron | 35.0% |
| ! | CATTGTCGATCTCTTTTTCT+TGG | - | chr4.4:18387121-18387140 | None:intergenic | 35.0% |
| ! | CTCTGAAAAGCTAGAGAAAT+TGG | - | chr4.4:18386692-18386711 | None:intergenic | 35.0% |
| !! | TCGTAGAATTCCTACTTTTG+AGG | + | chr4.4:18387185-18387204 | MS.gene23893:CDS | 35.0% |
| !! | TTTCTTAGTCTTGAAGTCCA+GGG | + | chr4.4:18386602-18386621 | MS.gene23893:intron | 35.0% |
| !!! | CATAAATGTTTTGGAGACCA+AGG | + | chr4.4:18384936-18384955 | MS.gene23893:intron | 35.0% |
| !!! | CTTTTTTTTTCCTTCTGCAG+TGG | + | chr4.4:18386367-18386386 | MS.gene23893:intron | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr4.4:18385165-18385184 | MS.gene23893:intron | 35.0% |
| !!! | TTTTCTTAGTCTTGAAGTCC+AGG | + | chr4.4:18386601-18386620 | MS.gene23893:intron | 35.0% |
| AACTCTTACAAATGGGTAGG+GGG | + | chr4.4:18385717-18385736 | MS.gene23893:intron | 40.0% | |
| AAGAAGCGATTGGTATATCC+TGG | + | chr4.4:18383305-18383324 | MS.gene23893:CDS | 40.0% | |
| AAGCTAGAGAAATTGGGTGA+AGG | - | chr4.4:18386685-18386704 | None:intergenic | 40.0% | |
| AAGGAGTTCTCTCTTGATAC+AGG | + | chr4.4:18386112-18386131 | MS.gene23893:intron | 40.0% | |
| ACAACTCAAGAGAAATCCCT+TGG | - | chr4.4:18384956-18384975 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr4.4:18385172-18385191 | None:intergenic | 40.0% | |
| ACATGCCTTCATAATATGCG+AGG | + | chr4.4:18385675-18385694 | MS.gene23893:intron | 40.0% | |
| AGAAGCGATTGGTATATCCT+GGG | + | chr4.4:18383306-18383325 | MS.gene23893:CDS | 40.0% | |
| AGTAATAAGGAAGAAAGGCG+AGG | + | chr4.4:18384183-18384202 | MS.gene23893:CDS | 40.0% | |
| AGTTACGTCTTGGTCGAAAT+CGG | - | chr4.4:18383145-18383164 | None:intergenic | 40.0% | |
| ATAACGCAAACAGGTTGTTC+TGG | - | chr4.4:18385939-18385958 | None:intergenic | 40.0% | |
| ATCTACTAGCATAAGCACCT+GGG | - | chr4.4:18383937-18383956 | None:intergenic | 40.0% | |
| ATGATGGTTGTAGGAATGAG+TGG | + | chr4.4:18385486-18385505 | MS.gene23893:intron | 40.0% | |
| ATGCGAAGGAGGTAATGATT+AGG | + | chr4.4:18383456-18383475 | MS.gene23893:CDS | 40.0% | |
| ATGTCCCACAATATCCAAAC+AGG | + | chr4.4:18385328-18385347 | MS.gene23893:intron | 40.0% | |
| CAACCTGTTTGCGTTATTAC+TGG | + | chr4.4:18385942-18385961 | MS.gene23893:CDS | 40.0% | |
| CAGCCAGTAATAAGGAAGAA+AGG | + | chr4.4:18384178-18384197 | MS.gene23893:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr4.4:18385171-18385190 | None:intergenic | 40.0% | |
| CATCAAGAAAGGCTCTTACT+TGG | - | chr4.4:18385976-18385995 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr4.4:18385140-18385159 | None:intergenic | 40.0% | |
| CTGAAACAAAGCCTATACCA+AGG | - | chr4.4:18384855-18384874 | None:intergenic | 40.0% | |
| CTGTAAGAGCTATTGCATGA+GGG | + | chr4.4:18386857-18386876 | MS.gene23893:intron | 40.0% | |
| CTGTCCTGTTTGGATATTGT+GGG | - | chr4.4:18385335-18385354 | None:intergenic | 40.0% | |
| GAGTACCCACAACTAAGTAA+GGG | + | chr4.4:18385066-18385085 | MS.gene23893:intron | 40.0% | |
| GCTCTCACAAATAATCTCAC+AGG | - | chr4.4:18383691-18383710 | None:intergenic | 40.0% | |
| GGAGAAGAAAATGTCACAAG+AGG | + | chr4.4:18384204-18384223 | MS.gene23893:CDS | 40.0% | |
| GGTAACTCTTACAAATGGGT+AGG | + | chr4.4:18385714-18385733 | MS.gene23893:intron | 40.0% | |
| GGTACAATGGCTATAGACAA+AGG | - | chr4.4:18386080-18386099 | None:intergenic | 40.0% | |
| GTGTATTTGTGCTCATCTAG+TGG | + | chr4.4:18383657-18383676 | MS.gene23893:intron | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | - | chr4.4:18385216-18385235 | None:intergenic | 40.0% | |
| TATCTACTAGCATAAGCACC+TGG | - | chr4.4:18383938-18383957 | None:intergenic | 40.0% | |
| TCGCCTTTCTTCCTTATTAC+TGG | - | chr4.4:18384184-18384203 | None:intergenic | 40.0% | |
| TGTAAGAGCTATTGCATGAG+GGG | + | chr4.4:18386858-18386877 | MS.gene23893:intron | 40.0% | |
| TGTAGGAATGAGTGGAGTAT+GGG | + | chr4.4:18385494-18385513 | MS.gene23893:intron | 40.0% | |
| TTAGATCAAACCACTGCAGA+AGG | - | chr4.4:18386380-18386399 | None:intergenic | 40.0% | |
| TTAGGTTTAGGAAAGGAGGA+TGG | + | chr4.4:18385002-18385021 | MS.gene23893:intron | 40.0% | |
| TTGTAGGAATGAGTGGAGTA+TGG | + | chr4.4:18385493-18385512 | MS.gene23893:intron | 40.0% | |
| ! | AACATCATAGTGGGGAAAAC+TGG | - | chr4.4:18386428-18386447 | None:intergenic | 40.0% |
| ! | AGAGTACCCACAACTAAGTA+AGG | + | chr4.4:18385065-18385084 | MS.gene23893:intron | 40.0% |
| ! | CATATTATGAAGGCATGTGG+TGG | - | chr4.4:18385673-18385692 | None:intergenic | 40.0% |
| ! | GGGAGTTGGTTAATGATAGT+AGG | + | chr4.4:18386908-18386927 | MS.gene23893:intron | 40.0% |
| ! | GTCGATCTCTTTTTCTTGGT+TGG | - | chr4.4:18387117-18387136 | None:intergenic | 40.0% |
| ! | GTTTTGTGGCTGTTCTTCAT+CGG | - | chr4.4:18383264-18383283 | None:intergenic | 40.0% |
| ! | TCGCATATTATGAAGGCATG+TGG | - | chr4.4:18385676-18385695 | None:intergenic | 40.0% |
| ! | TTTTGTGGCTGTTCTTCATC+GGG | - | chr4.4:18383263-18383282 | None:intergenic | 40.0% |
| !! | AAAAGCATTCATGTGGGAGT+TGG | + | chr4.4:18386894-18386913 | MS.gene23893:intron | 40.0% |
| !! | CTTTTAGAAGCTGCTCAAAC+AGG | + | chr4.4:18384232-18384251 | MS.gene23893:CDS | 40.0% |
| !! | GACCATAATCAGGTGTTGTT+TGG | - | chr4.4:18384129-18384148 | None:intergenic | 40.0% |
| !! | GGGATTATTTTGCAGCATTC+TGG | + | chr4.4:18387020-18387039 | MS.gene23893:intron | 40.0% |
| !! | GGTATAGGCTTTGTTTCAGA+TGG | + | chr4.4:18384856-18384875 | MS.gene23893:intron | 40.0% |
| !! | TTACACAAGAGGCTGTTTCT+AGG | + | chr4.4:18385176-18385195 | MS.gene23893:intron | 40.0% |
| !!! | TCTAGCTTTTCAGAGAGAGA+TGG | + | chr4.4:18386697-18386716 | MS.gene23893:intron | 40.0% |
| !!! | TTTTGGCTCAGCCAGTAATA+AGG | + | chr4.4:18384170-18384189 | MS.gene23893:intron | 40.0% |
| AAGAAAGGCTCTTACTTGGC+AGG | - | chr4.4:18385972-18385991 | None:intergenic | 45.0% | |
| AATTCTACGAAACCGAGCCA+AGG | - | chr4.4:18387175-18387194 | None:intergenic | 45.0% | |
| ACAACTAAGTAAGGGCAACC+CGG | + | chr4.4:18385074-18385093 | MS.gene23893:intron | 45.0% | |
| ACATTCCAAAGGAAGGACCT+TGG | + | chr4.4:18384835-18384854 | MS.gene23893:intron | 45.0% | |
| ACTGGACACATTCCAAAGGA+AGG | + | chr4.4:18384828-18384847 | MS.gene23893:intron | 45.0% | |
| AGCTCTCAAAGCAACCTACA+AGG | + | chr4.4:18383535-18383554 | MS.gene23893:CDS | 45.0% | |
| CAAAGGAAGGACCTTGGTAT+AGG | + | chr4.4:18384841-18384860 | MS.gene23893:intron | 45.0% | |
| CCAAGAAGAAGCTGAAATCG+CGG | + | chr4.4:18383107-18383126 | MS.gene23893:CDS | 45.0% | |
| CCACAATATCCAAACAGGAC+AGG | + | chr4.4:18385333-18385352 | MS.gene23893:intron | 45.0% | |
| CCTGTCCTGTTTGGATATTG+TGG | - | chr4.4:18385336-18385355 | None:intergenic | 45.0% | |
| CTACTTCAACCTGTCCTGTT+TGG | - | chr4.4:18385345-18385364 | None:intergenic | 45.0% | |
| CTATACCAAGGTCCTTCCTT+TGG | - | chr4.4:18384843-18384862 | None:intergenic | 45.0% | |
| GAATGGCTTCTCTTTCAGCT+TGG | - | chr4.4:18383511-18383530 | None:intergenic | 45.0% | |
| GAGATCGAATCTTCTACTGC+TGG | + | chr4.4:18382963-18382982 | MS.gene23893:CDS | 45.0% | |
| GATGCTCAACTTGCGTCATT+TGG | + | chr4.4:18386558-18386577 | MS.gene23893:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr4.4:18385141-18385160 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr4.4:18385144-18385163 | None:intergenic | 45.0% | |
| GCTGTAAGAGCTATTGCATG+AGG | + | chr4.4:18386856-18386875 | MS.gene23893:intron | 45.0% | |
| GGTTGCCCTTACTTAGTTGT+GGG | - | chr4.4:18385074-18385093 | None:intergenic | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | - | chr4.4:18385210-18385229 | None:intergenic | 45.0% | |
| GTTTAGGAAAGGAGGATGGA+TGG | + | chr4.4:18385006-18385025 | MS.gene23893:intron | 45.0% | |
| TACAGCTTGACGTGTAGAGT+TGG | - | chr4.4:18386842-18386861 | None:intergenic | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | - | chr4.4:18385209-18385228 | None:intergenic | 45.0% | |
| TCCAACAATAGTATGTGCCC+TGG | - | chr4.4:18386622-18386641 | None:intergenic | 45.0% | |
| TCCAGGGCACATACTATTGT+TGG | + | chr4.4:18386618-18386637 | MS.gene23893:intron | 45.0% | |
| TTCAGCTTGGCGAACAATGA+CGG | - | chr4.4:18383498-18383517 | None:intergenic | 45.0% | |
| TTGGAGAGAGAGTTACGTCT+TGG | - | chr4.4:18383155-18383174 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4.4:18385859-18385878 | None:intergenic | 45.0% |
| ! | ACACTTAGTTGTGGGTACTG+AGG | - | chr4.4:18385263-18385282 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4.4:18385860-18385879 | None:intergenic | 45.0% |
| !! | ACTTAGTTGTGGGTACTGAG+GGG | - | chr4.4:18385261-18385280 | None:intergenic | 45.0% |
| !! | AGATGAATTGTTCTGGGGTC+AGG | + | chr4.4:18383050-18383069 | MS.gene23893:CDS | 45.0% |
| !! | CACTTAGTTGTGGGTACTGA+GGG | - | chr4.4:18385262-18385281 | None:intergenic | 45.0% |
| ACATCCACATGATCGGTCCT+TGG | + | chr4.4:18387155-18387174 | MS.gene23893:CDS | 50.0% | |
| ATATCCTGGGAAGGCGACAT+TGG | + | chr4.4:18383319-18383338 | MS.gene23893:CDS | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr4.4:18385232-18385251 | MS.gene23893:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr4.4:18385858-18385877 | MS.gene23893:intron | 50.0% | |
| CCGCGATTTCAGCTTCTTCT+TGG | - | chr4.4:18383110-18383129 | None:intergenic | 50.0% | |
| CGAGGTTGAAGATGGCATGT+TGG | + | chr4.4:18385693-18385712 | MS.gene23893:intron | 50.0% | |
| CGCACATTCTTGAGACGTTG+TGG | - | chr4.4:18384621-18384640 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr4.4:18385855-18385874 | None:intergenic | 50.0% | |
| GCGATTGGTATATCCTGGGA+AGG | + | chr4.4:18383310-18383329 | MS.gene23893:CDS | 50.0% | |
| GGGTTGCCCTTACTTAGTTG+TGG | - | chr4.4:18385075-18385094 | None:intergenic | 50.0% | |
| GGTACCGTGATCCAAAGACT+GGG | + | chr4.4:18386133-18386152 | MS.gene23893:intron | 50.0% | |
| GTGGGCATACTGAGATGGAT+AGG | + | chr4.4:18385521-18385540 | MS.gene23893:intron | 50.0% | |
| TATAGCCGACCCCACTTAGT+GGG | + | chr4.4:18385847-18385866 | MS.gene23893:intron | 50.0% | |
| TTATAGCCGACCCCACTTAG+TGG | + | chr4.4:18385846-18385865 | MS.gene23893:intron | 50.0% | |
| ! | AGGTACCGTGATCCAAAGAC+TGG | + | chr4.4:18386132-18386151 | MS.gene23893:intron | 50.0% |
| ! | ATTGGGTGAAGGCACATGCA+TGG | - | chr4.4:18386674-18386693 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4.4:18385861-18385880 | None:intergenic | 50.0% |
| ! | GCGAACAATGACGGAAGTTC+TGG | - | chr4.4:18383489-18383508 | None:intergenic | 50.0% |
| !! | TGCTTTGAGAGCTTCGCGAA+TGG | - | chr4.4:18383528-18383547 | None:intergenic | 50.0% |
| !!! | GGAGCGAGTTTTAGCTAGAG+AGG | + | chr4.4:18384385-18384404 | MS.gene23893:CDS | 50.0% |
| CAACCAGGACGATGATGCGA+AGG | + | chr4.4:18383442-18383461 | MS.gene23893:CDS | 55.0% | |
| CACATGATCGGTCCTTGGCT+CGG | + | chr4.4:18387160-18387179 | MS.gene23893:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr4.4:18385853-18385872 | MS.gene23893:intron | 55.0% | |
| GACGAGTGGGCATACTGAGA+TGG | + | chr4.4:18385516-18385535 | MS.gene23893:intron | 55.0% | |
| GAGTGGAGTATGGGACGAGT+GGG | + | chr4.4:18385503-18385522 | MS.gene23893:intron | 55.0% | |
| GCAGCCCAGTCTTTGGATCA+CGG | - | chr4.4:18386140-18386159 | None:intergenic | 55.0% | |
| GGCTGTTCTTCATCGGGTTC+AGG | - | chr4.4:18383257-18383276 | None:intergenic | 55.0% | |
| GGTCTGCAGTCATCCTCCTA+TGG | - | chr4.4:18386407-18386426 | None:intergenic | 55.0% | |
| TGAGTGGAGTATGGGACGAG+TGG | + | chr4.4:18385502-18385521 | MS.gene23893:intron | 55.0% | |
| TTAGCCAATGTCGCCTTCCC+AGG | - | chr4.4:18383326-18383345 | None:intergenic | 55.0% | |
| !! | TGGGTACTGAGGGGTAACCT+TGG | - | chr4.4:18385252-18385271 | None:intergenic | 55.0% |
| ACTGAAGCTCCCGCATACGC+AGG | + | chr4.4:18385100-18385119 | MS.gene23893:intron | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr4.4:18385243-18385262 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr4.4:18385096-18385115 | None:intergenic | 60.0% | |
| CAGGAAGGGGTCCCACCATT+TGG | + | chr4.4:18385126-18385145 | MS.gene23893:intron | 60.0% | |
| CATACGCAGGGTCCAGGAAG+GGG | + | chr4.4:18385113-18385132 | MS.gene23893:intron | 60.0% | |
| CCAGGACGATGATGCGAAGG+AGG | + | chr4.4:18383445-18383464 | MS.gene23893:CDS | 60.0% | |
| CCTCCTTCGCATCATCGTCC+TGG | - | chr4.4:18383448-18383467 | None:intergenic | 60.0% | |
| CGAGCCAAGGACCGATCATG+TGG | - | chr4.4:18387162-18387181 | None:intergenic | 60.0% | |
| CGTGCATCTCGAGCGACAAG+AGG | + | chr4.4:18382988-18383007 | MS.gene23893:CDS | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | + | chr4.4:18385101-18385120 | MS.gene23893:intron | 60.0% | |
| CTTCCTGGACCCTGCGTATG+CGG | - | chr4.4:18385113-18385132 | None:intergenic | 60.0% | |
| GCATACGCAGGGTCCAGGAA+GGG | + | chr4.4:18385112-18385131 | MS.gene23893:intron | 60.0% | |
| GCGTATGGCAGCCCAGTCTT+TGG | - | chr4.4:18386147-18386166 | None:intergenic | 60.0% | |
| TTCCTGGACCCTGCGTATGC+GGG | - | chr4.4:18385112-18385131 | None:intergenic | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+TGG | - | chr4.4:18385128-18385147 | None:intergenic | 60.0% |
| CGCATACGCAGGGTCCAGGA+AGG | + | chr4.4:18385111-18385130 | MS.gene23893:intron | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr4.4:18385095-18385114 | None:intergenic | 65.0% | |
| CTCCCGCATACGCAGGGTCC+AGG | + | chr4.4:18385107-18385126 | MS.gene23893:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 18382934 | 18387224 | 18382934 | ID=MS.gene23893 |
| chr4.4 | mRNA | 18382934 | 18387224 | 18382934 | ID=MS.gene23893.t1;Parent=MS.gene23893 |
| chr4.4 | exon | 18382934 | 18383158 | 18382934 | ID=MS.gene23893.t1.exon1;Parent=MS.gene23893.t1 |
| chr4.4 | CDS | 18382934 | 18383158 | 18382934 | ID=cds.MS.gene23893.t1;Parent=MS.gene23893.t1 |
| chr4.4 | exon | 18383251 | 18383556 | 18383251 | ID=MS.gene23893.t1.exon2;Parent=MS.gene23893.t1 |
| chr4.4 | CDS | 18383251 | 18383556 | 18383251 | ID=cds.MS.gene23893.t1;Parent=MS.gene23893.t1 |
| chr4.4 | exon | 18384181 | 18384253 | 18384181 | ID=MS.gene23893.t1.exon3;Parent=MS.gene23893.t1 |
| chr4.4 | CDS | 18384181 | 18384253 | 18384181 | ID=cds.MS.gene23893.t1;Parent=MS.gene23893.t1 |
| chr4.4 | exon | 18384363 | 18384482 | 18384363 | ID=MS.gene23893.t1.exon4;Parent=MS.gene23893.t1 |
| chr4.4 | CDS | 18384363 | 18384482 | 18384363 | ID=cds.MS.gene23893.t1;Parent=MS.gene23893.t1 |
| chr4.4 | exon | 18384567 | 18384635 | 18384567 | ID=MS.gene23893.t1.exon5;Parent=MS.gene23893.t1 |
| chr4.4 | CDS | 18384567 | 18384635 | 18384567 | ID=cds.MS.gene23893.t1;Parent=MS.gene23893.t1 |
| chr4.4 | exon | 18385934 | 18385976 | 18385934 | ID=MS.gene23893.t1.exon6;Parent=MS.gene23893.t1 |
| chr4.4 | CDS | 18385934 | 18385976 | 18385934 | ID=cds.MS.gene23893.t1;Parent=MS.gene23893.t1 |
| chr4.4 | exon | 18386134 | 18386199 | 18386134 | ID=MS.gene23893.t1.exon7;Parent=MS.gene23893.t1 |
| chr4.4 | CDS | 18386134 | 18386199 | 18386134 | ID=cds.MS.gene23893.t1;Parent=MS.gene23893.t1 |
| chr4.4 | exon | 18387035 | 18387224 | 18387035 | ID=MS.gene23893.t1.exon8;Parent=MS.gene23893.t1 |
| chr4.4 | CDS | 18387035 | 18387224 | 18387035 | ID=cds.MS.gene23893.t1;Parent=MS.gene23893.t1 |
| Gene Sequence |
| Protein sequence |
