AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69459


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69459.t1 MTR_3g112280 96.137 466 18 0 1 466 1 466 0.0 923
MS.gene69459.t1 MTR_3g112280 96.094 384 15 0 1 384 1 384 0.0 761
MS.gene69459.t1 MTR_4g011910 29.372 446 238 10 72 456 224 653 1.35e-41 157
MS.gene69459.t1 MTR_4g069840 28.698 453 246 11 72 461 194 632 3.64e-39 150
MS.gene69459.t1 MTR_3g112270 44.706 170 44 5 283 451 34 154 2.65e-30 115
MS.gene69459.t1 MTR_2g102283 46.610 118 62 1 345 461 592 709 5.97e-22 99.8
MS.gene69459.t1 MTR_2g102283 29.924 264 140 11 68 303 248 494 5.31e-19 90.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69459.t1 AT1G75420 76.149 457 104 3 8 464 7 458 0.0 675
MS.gene69459.t1 AT1G75420 78.505 428 88 2 37 464 9 432 0.0 650
MS.gene69459.t1 AT1G19710 73.404 470 118 4 1 464 1 469 0.0 647
MS.gene69459.t1 AT1G75420 81.769 373 68 0 92 464 1 373 0.0 634
MS.gene69459.t1 AT1G52420 29.801 453 250 11 68 461 226 669 2.20e-44 165
MS.gene69459.t1 AT3G15940 28.690 481 244 13 68 461 228 696 6.47e-38 147
MS.gene69459.t1 AT3G15940 28.690 481 244 13 68 461 228 696 6.47e-38 147

Find 111 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCACATAACATTGTGAAAT+TGG 0.197530 3.3:-92572812 MS.gene69459:CDS
ACGAAATGCCATTGCTTCTA+TGG 0.222266 3.3:+92574146 None:intergenic
TCGCACGAACTATCTCTTTC+TGG 0.222877 3.3:-92576698 MS.gene69459:CDS
GTGGCTGGATGCCGTCTTAA+AGG 0.261650 3.3:-92575472 MS.gene69459:CDS
GGGTTCTTCGTGAGCATGTT+AGG 0.272900 3.3:-92575098 MS.gene69459:CDS
AATAGGACCAGGGAGAGTTT+AGG 0.282610 3.3:-92575306 MS.gene69459:CDS
TGATCAGGTTATTTATAGTT+TGG 0.290255 3.3:-92576585 MS.gene69459:CDS
TGGAAATAGCAAGGAACTTA+TGG 0.291694 3.3:-92575148 MS.gene69459:CDS
AGATGTACAACATAAGTTTC+AGG 0.314019 3.3:+92575171 None:intergenic
TGAAAGTTTGCAGCTCATTC+AGG 0.315271 3.3:-92574742 MS.gene69459:CDS
GAGAGTGAAAGAGAGGTTTC+TGG 0.327030 3.3:-92572743 MS.gene69459:CDS
ATAGGACCAGGGAGAGTTTA+GGG 0.339089 3.3:-92575305 MS.gene69459:intron
TCTTTGCATGCTATAGTTGT+AGG 0.358411 3.3:-92574699 MS.gene69459:CDS
GTCACACCATCCTTGCCTTC+AGG 0.359263 3.3:+92572841 None:intergenic
CAGTCACGGGGAGAATGTTT+TGG 0.367113 3.3:-92574177 MS.gene69459:CDS
TGTTGAGAAGAGGCTGACTA+TGG 0.372554 3.3:-92572782 MS.gene69459:CDS
ACTGTGGAGATCGTGGTTAA+TGG 0.373098 3.3:-92572883 MS.gene69459:CDS
GAAACTTATGTTGTACATCT+TGG 0.390726 3.3:-92575168 MS.gene69459:CDS
AATGTTGGACAGAGGAGTTC+AGG 0.395727 3.3:-92576555 MS.gene69459:intron
CTGCAGAGTACTGGAAGAAT+AGG 0.404454 3.3:-92575323 MS.gene69459:CDS
CTAGGTAAGGAGCCACTGTC+AGG 0.405315 3.3:+92574580 None:intergenic
CTGTGGAGATCGTGGTTAAT+GGG 0.408149 3.3:-92572882 MS.gene69459:CDS
TGCTCAGACAAAGTTTGAAA+TGG 0.409480 3.3:-92574664 MS.gene69459:CDS
TTCATGAAATCCAAGGGGCT+TGG 0.414417 3.3:+92576743 None:intergenic
GTGTTGGTTCTGATGTTGTT+TGG 0.416917 3.3:-92576634 MS.gene69459:CDS
ATCATAGCACCTGCAACAAA+AGG 0.424798 3.3:+92575360 None:intergenic
TACAGCTCTTAAAGCTGATC+TGG 0.435509 3.3:-92575523 MS.gene69459:CDS
ATCGTGGTTAATGGGACAAC+CGG 0.438418 3.3:-92572874 MS.gene69459:CDS
CAGGTGTTTCACGTGGTAAA+GGG 0.445043 3.3:-92574791 MS.gene69459:CDS
GCAGGTGTTTCACGTGGTAA+AGG 0.451121 3.3:-92574792 MS.gene69459:intron
ATGAAAGCTAGTAACATTAA+CGG 0.460740 3.3:+92576893 None:intergenic
CCTGCCTGCAAAAGGTGAAA+AGG 0.463848 3.3:-92575553 MS.gene69459:CDS
CTGATTCCGTTGTGCTTCGA+AGG 0.470227 3.3:+92576802 None:intergenic
CACATATAACTGCAGAGTAC+TGG 0.470342 3.3:-92575332 MS.gene69459:CDS
CTTTGTGGTGTTGCATGAAT+CGG 0.474570 3.3:+92576826 None:intergenic
ATTCTAAATACTGCTGTAGC+TGG 0.475189 3.3:-92575498 MS.gene69459:CDS
GGCATTTCGTCTGCCTGTAC+TGG 0.475966 3.3:-92574133 MS.gene69459:intron
TCCGTCGGAAATGCACCATC+TGG 0.478042 3.3:-92576767 MS.gene69459:CDS
TAGTTTGGAGAGTAAAATGT+TGG 0.480059 3.3:-92576570 MS.gene69459:CDS
TTGCATGAATCGGAATTGTT+CGG 0.482273 3.3:+92576836 None:intergenic
GCCTTCAGGATGCAGCAAAC+CGG 0.485028 3.3:+92572855 None:intergenic
TGCTGTAGCTGGAAAGTGGC+TGG 0.486096 3.3:-92575487 MS.gene69459:CDS
TGATAGGTCCTGCCTGCAAA+AGG 0.486905 3.3:-92575561 MS.gene69459:intron
TGTTCTTGTTCAGAATTCTC+AGG 0.489341 3.3:-92574547 MS.gene69459:intron
GGTTCTTCGTGAGCATGTTA+GGG 0.489601 3.3:-92575097 MS.gene69459:CDS
AGGCTGACTATGGGAAAGAA+AGG 0.492284 3.3:-92572772 MS.gene69459:CDS
TTGTGCTTCGAAGGTCTTTG+TGG 0.502365 3.3:+92576811 None:intergenic
TGAATCCACCATAAAACCTT+CGG 0.503051 3.3:+92575429 None:intergenic
GTATCCTGCTGAACATGATC+AGG 0.504998 3.3:-92576600 MS.gene69459:CDS
CTTTGCATGCTATAGTTGTA+GGG 0.505856 3.3:-92574698 MS.gene69459:CDS
CAGAAGATAGTGTAGCAAAG+AGG 0.510374 3.3:-92575119 MS.gene69459:CDS
CTTCGATTTCATGAAATCCA+AGG 0.514716 3.3:+92576736 None:intergenic
TTCGATTTCATGAAATCCAA+GGG 0.516013 3.3:+92576737 None:intergenic
GGCGAAGCATTCAGTAGCAT+TGG 0.516216 3.3:-92576930 MS.gene69459:CDS
TGGTGCATTTCCGACGGAAG+AGG 0.519098 3.3:+92576772 None:intergenic
CTGCAATTCTATGTGACATA+TGG 0.519548 3.3:+92572716 None:intergenic
GGTATGAGAGAGTGAAAGAG+AGG 0.524664 3.3:-92572750 MS.gene69459:CDS
GCCAATTCCATCAAAAGTAA+AGG 0.527566 3.3:+92576671 None:intergenic
AGAAGATAGTGTAGCAAAGA+GGG 0.528791 3.3:-92575118 MS.gene69459:CDS
ATAACCTGATCATGTTCAGC+AGG 0.529328 3.3:+92576596 None:intergenic
AGTTACCCTCGTTCTTCCGA+AGG 0.529697 3.3:-92575445 MS.gene69459:CDS
TCCAAGGGGCTTGGACCAGA+TGG 0.531755 3.3:+92576752 None:intergenic
GAGCATGTTAGGGAATCTCT+TGG 0.531903 3.3:-92575087 MS.gene69459:CDS
ACAACTATAGCATGCAAAGA+TGG 0.532628 3.3:+92574702 None:intergenic
TAGCATTGGCGAAGAAAAGA+TGG 0.533158 3.3:-92576916 MS.gene69459:CDS
GAAATCGAAGCTAGTTCTCA+TGG 0.534458 3.3:-92576723 MS.gene69459:CDS
AGTGAAGGACGTACCAGTAC+AGG 0.541451 3.3:+92574120 None:intergenic
CAAGAACATCAATAGAAGCT+AGG 0.543899 3.3:+92574562 None:intergenic
AACATACCCTAAACTCTCCC+TGG 0.543946 3.3:+92575299 None:intergenic
GGTGCATTTCCGACGGAAGA+GGG 0.544846 3.3:+92576773 None:intergenic
TTCACAATGTTATGTGCAAG+AGG 0.545519 3.3:+92572817 None:intergenic
TTGCAGGGCACTGCAGCTGG+AGG 0.549732 3.3:-92572907 MS.gene69459:intron
ACCATCTGGTCCAAGCCCCT+TGG 0.551441 3.3:-92576753 MS.gene69459:CDS
TAGTGACATACTATTTATGA+TGG 0.554440 3.3:+92575038 None:intergenic
CTGCATCCTGAAGGCAAGGA+TGG 0.559919 3.3:-92572847 MS.gene69459:CDS
TCATAGCACCTGCAACAAAA+GGG 0.561260 3.3:+92575361 None:intergenic
ACATCAATAGAAGCTAGGTA+AGG 0.568775 3.3:+92574567 None:intergenic
ATGTTCAGCAGGATACTGAT+TGG 0.569395 3.3:+92576607 None:intergenic
TAGAATTGCAGTGGTTCTCA+AGG 0.573300 3.3:-92572704 MS.gene69459:CDS
ACCGGTTTGCTGCATCCTGA+AGG 0.579599 3.3:-92572856 MS.gene69459:CDS
AGTACTGGAAGAATAGGACC+AGG 0.581747 3.3:-92575317 MS.gene69459:CDS
GAGCTGCAAACTTTCATGAA+AGG 0.583871 3.3:+92574749 None:intergenic
GAGAGTAAAATGTTGGACAG+AGG 0.584323 3.3:-92576563 MS.gene69459:CDS
CACGAACTATCTCTTTCTGG+TGG 0.584552 3.3:-92576695 MS.gene69459:CDS
AAGGATAACCATAGAAGCAA+TGG 0.585803 3.3:-92574154 MS.gene69459:CDS
GCGAGGGAATTATTTCAAAG+AGG 0.586349 3.3:-92575400 MS.gene69459:CDS
GTTGAGAAGAGGCTGACTAT+GGG 0.594669 3.3:-92572781 MS.gene69459:CDS
GGCTGACTATGGGAAAGAAA+GGG 0.596427 3.3:-92572771 MS.gene69459:CDS
ACCAGATGGTGCATTTCCGA+CGG 0.597524 3.3:+92576766 None:intergenic
TTTGCTGCATCCTGAAGGCA+AGG 0.599998 3.3:-92572851 MS.gene69459:CDS
CAGATTCACCCCTCTTCCGT+CGG 0.601811 3.3:-92576782 MS.gene69459:CDS
TGGTGGATTCATGAAATGCG+AGG 0.616138 3.3:-92575417 MS.gene69459:CDS
TGGCAAGTCATGTTGAGAAG+AGG 0.617321 3.3:-92572792 MS.gene69459:CDS
CACTGCAGCTGGAGGCACTG+TGG 0.621939 3.3:-92572899 MS.gene69459:CDS
TGGAGGCACTGTGGAGATCG+TGG 0.626460 3.3:-92572890 MS.gene69459:CDS
GTGCATTTCCGACGGAAGAG+GGG 0.627718 3.3:+92576774 None:intergenic
ATACTGCTGTAGCTGGAAAG+TGG 0.634836 3.3:-92575491 MS.gene69459:CDS
TGTACATCTTGGAAATAGCA+AGG 0.635730 3.3:-92575157 MS.gene69459:CDS
GGTGGATTCATGAAATGCGA+GGG 0.637828 3.3:-92575416 MS.gene69459:CDS
TGTTAACAAAACCCTGACAG+TGG 0.644245 3.3:-92574592 MS.gene69459:CDS
TAGGTAAGGAGCCACTGTCA+GGG 0.644824 3.3:+92574581 None:intergenic
AACTTTCATGAAAGGCACGA+AGG 0.649061 3.3:+92574757 None:intergenic
TTAAATGCAGGTGTTTCACG+TGG 0.656172 3.3:-92574798 MS.gene69459:intron
ATAAAACCTTCGGAAGAACG+AGG 0.660037 3.3:+92575439 None:intergenic
TATGTCACATAGAATTGCAG+TGG 0.663579 3.3:-92572713 MS.gene69459:CDS
TAAAACCTTCGGAAGAACGA+GGG 0.689246 3.3:+92575440 None:intergenic
CAAAGACCTTCGAAGCACAA+CGG 0.690089 3.3:-92576808 MS.gene69459:CDS
TAGCACCTGCAACAAAAGGG+AGG 0.690112 3.3:+92575364 None:intergenic
TTCTCTTCATACCAGTCACG+GGG 0.693192 3.3:-92574189 MS.gene69459:intron
GTACTGGAAGAATAGGACCA+GGG 0.700205 3.3:-92575316 MS.gene69459:CDS
TCGATTTCATGAAATCCAAG+GGG 0.703979 3.3:+92576738 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATTATTAAATGAATC+TGG + chr3.3:92574335-92574354 None:intergenic 10.0%
!! TAATTCATTGTATAAATTAA+CGG - chr3.3:92573327-92573346 MS.gene69459:intron 10.0%
!! TAATTTATACAATGAATTAT+AGG + chr3.3:92573326-92573345 None:intergenic 10.0%
!!! AAAGTATTATTTTAGTTTTT+GGG - chr3.3:92575377-92575396 MS.gene69459:CDS 10.0%
!!! TAAAGTATTATTTTAGTTTT+TGG - chr3.3:92575376-92575395 MS.gene69459:CDS 10.0%
!! AAAAATAATACTGTTAAAGT+TGG - chr3.3:92576339-92576358 MS.gene69459:intron 15.0%
!! ATGAAACCAAAATAATAAAA+AGG + chr3.3:92575785-92575804 None:intergenic 15.0%
!!! ACTATTTTTTTACTAATTTG+TGG - chr3.3:92575987-92576006 MS.gene69459:intron 15.0%
!! AGTAAAAAAATAGTTACACA+GGG + chr3.3:92575981-92576000 None:intergenic 20.0%
!! ATGAAACTAATATTATTCTG+AGG - chr3.3:92576271-92576290 MS.gene69459:intron 20.0%
!! TAACACGTATAGATATAAAA+GGG + chr3.3:92575545-92575564 None:intergenic 20.0%
!! TAGTAAAAAAATAGTTACAC+AGG + chr3.3:92575982-92576001 None:intergenic 20.0%
!! TATAAATTAACGGTAGAATT+TGG - chr3.3:92573337-92573356 MS.gene69459:intron 20.0%
!! TTAACACGTATAGATATAAA+AGG + chr3.3:92575546-92575565 None:intergenic 20.0%
!!! AACTTTTTTTTTCATCTGAT+TGG - chr3.3:92574019-92574038 MS.gene69459:intron 20.0%
!!! CATATTTGGAATTATGAATA+GGG - chr3.3:92573201-92573220 MS.gene69459:intron 20.0%
!!! CATTTTAATTCTACAAAATC+AGG + chr3.3:92574416-92574435 None:intergenic 20.0%
!!! TAGTTATGTTTTTCCATATT+TGG - chr3.3:92573187-92573206 MS.gene69459:intron 20.0%
!!! TTTTGTTAACAAAATGAACA+CGG + chr3.3:92575006-92575025 None:intergenic 20.0%
!!! TTTTTTAGATTTTTTTCGAC+AGG + chr3.3:92575827-92575846 None:intergenic 20.0%
! AACTTGTGTAACATTAATTG+AGG - chr3.3:92576400-92576419 MS.gene69459:intron 25.0%
! AAGGAAAATTAGTGAATTTG+AGG + chr3.3:92576122-92576141 None:intergenic 25.0%
! AATGAATATTGAATGAGTAC+AGG + chr3.3:92574595-92574614 None:intergenic 25.0%
! AGGTACACACTATATTAAAT+TGG + chr3.3:92574731-92574750 None:intergenic 25.0%
! ATCATTCAAAAAAGGCAATT+TGG + chr3.3:92575891-92575910 None:intergenic 25.0%
! ATGAAAGCTAGTAACATTAA+CGG + chr3.3:92572717-92572736 None:intergenic 25.0%
! CAATAAAGATCAAAACGAAA+AGG + chr3.3:92573099-92573118 None:intergenic 25.0%
! CCTATTCATAATTCCAAATA+TGG + chr3.3:92573203-92573222 None:intergenic 25.0%
! CTGATGTTATCATTCAAAAA+AGG + chr3.3:92575899-92575918 None:intergenic 25.0%
! GTAAAAAAATAGTTACACAG+GGG + chr3.3:92575980-92575999 None:intergenic 25.0%
! TAGTGACATACTATTTATGA+TGG + chr3.3:92574572-92574591 None:intergenic 25.0%
! TGATCAGGTTATTTATAGTT+TGG - chr3.3:92573022-92573041 MS.gene69459:intron 25.0%
! TGTGAACTATGTTTATCAAA+TGG + chr3.3:92573862-92573881 None:intergenic 25.0%
! TTAAAACAACTAGGATAACA+TGG + chr3.3:92576175-92576194 None:intergenic 25.0%
! TTACAAATAGATTCCGAAAT+TGG + chr3.3:92576618-92576637 None:intergenic 25.0%
!! ATCATGCAATCTAAAGTTTA+AGG + chr3.3:92575173-92575192 None:intergenic 25.0%
!! CCATATTTGGAATTATGAAT+AGG - chr3.3:92573200-92573219 MS.gene69459:intron 25.0%
!! TCAAACTTTTGACATTATGA+TGG - chr3.3:92575143-92575162 MS.gene69459:CDS 25.0%
!! TCATGCAATCTAAAGTTTAA+GGG + chr3.3:92575172-92575191 None:intergenic 25.0%
!! TGTCTGCCTTTTTATTATTT+TGG - chr3.3:92575776-92575795 MS.gene69459:intron 25.0%
!!! ATACATTACCAAGTTGATTA+TGG - chr3.3:92575097-92575116 MS.gene69459:CDS 25.0%
!!! TGCAATATGTTTTGGAAATT+AGG + chr3.3:92575207-92575226 None:intergenic 25.0%
AAATAGGGATTTGACTCAAA+TGG - chr3.3:92573239-92573258 MS.gene69459:intron 30.0%
ACAAATCGATATGAGAAGAA+AGG + chr3.3:92575273-92575292 None:intergenic 30.0%
ACAACTCAAATATCTAGTGA+AGG + chr3.3:92575505-92575524 None:intergenic 30.0%
ACAATGGTGAAATCCAATAA+GGG + chr3.3:92573448-92573467 None:intergenic 30.0%
ACGTATAGATATAAAAGGGA+AGG + chr3.3:92575541-92575560 None:intergenic 30.0%
ACGTCAAAAAGTTCATTAAG+TGG + chr3.3:92573777-92573796 None:intergenic 30.0%
AGATGTACAACATAAGTTTC+AGG + chr3.3:92574439-92574458 None:intergenic 30.0%
AGTTGCAACTAACAAATGAA+TGG + chr3.3:92576384-92576403 None:intergenic 30.0%
ATGATTGCTTAAGTTTATGG+AGG - chr3.3:92573488-92573507 MS.gene69459:intron 30.0%
ATTCAGTGTGTCTACAAATA+GGG - chr3.3:92573224-92573243 MS.gene69459:intron 30.0%
CAATCATGTTATCAAAGCAT+TGG + chr3.3:92576316-92576335 None:intergenic 30.0%
CTTAGAAGTTCAATAACACA+TGG + chr3.3:92573996-92574015 None:intergenic 30.0%
GAAACTTATGTTGTACATCT+TGG - chr3.3:92574439-92574458 MS.gene69459:intron 30.0%
GTATCATGTACATTTCCTTA+AGG + chr3.3:92575681-92575700 None:intergenic 30.0%
TACAATGGTGAAATCCAATA+AGG + chr3.3:92573449-92573468 None:intergenic 30.0%
TAGTTTGGAGAGTAAAATGT+TGG - chr3.3:92573037-92573056 MS.gene69459:intron 30.0%
TCATATATAGACACAGAAGA+GGG + chr3.3:92573710-92573729 None:intergenic 30.0%
TCCATAAACTTAAGCAATCA+TGG + chr3.3:92573489-92573508 None:intergenic 30.0%
TGATAAACATAGTTCACATG+TGG - chr3.3:92573864-92573883 MS.gene69459:intron 30.0%
TGCACATAACATTGTGAAAT+TGG - chr3.3:92576795-92576814 MS.gene69459:CDS 30.0%
TGTAAAAAAGTGAACAGAAG+AGG + chr3.3:92574751-92574770 None:intergenic 30.0%
TGTAATCAGTTTGATAGAGT+TGG - chr3.3:92573924-92573943 MS.gene69459:intron 30.0%
TGTTTCAGAGAAAAAGATTC+AGG - chr3.3:92574979-92574998 MS.gene69459:intron 30.0%
TTCGATTTCATGAAATCCAA+GGG + chr3.3:92572873-92572892 None:intergenic 30.0%
! CATGATATTTTCATCCAATG+CGG - chr3.3:92574636-92574655 MS.gene69459:CDS 30.0%
! GCTGACTTATAATCAATTCT+TGG - chr3.3:92576424-92576443 MS.gene69459:intron 30.0%
! TTCCGTTAAAAACTTTTGCA+GGG - chr3.3:92576685-92576704 MS.gene69459:CDS 30.0%
! TTTCCGTTAAAAACTTTTGC+AGG - chr3.3:92576684-92576703 MS.gene69459:CDS 30.0%
! TTTTGCTAGTATGTATTCTG+AGG - chr3.3:92574775-92574794 MS.gene69459:CDS 30.0%
!! ACAAAGTTTGCTAGTTTAGA+AGG - chr3.3:92575315-92575334 MS.gene69459:CDS 30.0%
!! ACCATTGTAGTGTTTTTATG+TGG - chr3.3:92573460-92573479 MS.gene69459:intron 30.0%
!! ACCTTTACTTTTGATGGAAT+TGG - chr3.3:92572935-92572954 MS.gene69459:intron 30.0%
!! AGCATGTCTTTAAAACAACT+AGG + chr3.3:92576184-92576203 None:intergenic 30.0%
!! CAAAGTTTGCTAGTTTAGAA+GGG - chr3.3:92575316-92575335 MS.gene69459:CDS 30.0%
!! GATCTTTATTGTTGTTTACG+TGG - chr3.3:92573108-92573127 MS.gene69459:intron 30.0%
!! GGTAACTTTTTCCTTTAAGA+CGG + chr3.3:92574149-92574168 None:intergenic 30.0%
!! TGCTTAACTCGTATTTTTGT+GGG + chr3.3:92573900-92573919 None:intergenic 30.0%
!! TTGCTTAACTCGTATTTTTG+TGG + chr3.3:92573901-92573920 None:intergenic 30.0%
AAACAACTAGGATAACATGG+TGG + chr3.3:92576172-92576191 None:intergenic 35.0%
AACTGAATCAATTCGGAAGT+GGG + chr3.3:92575230-92575249 None:intergenic 35.0%
AACTTTGTCTCCATACATCA+TGG + chr3.3:92575303-92575322 None:intergenic 35.0%
AAGGATAACCATAGAAGCAA+TGG - chr3.3:92575453-92575472 MS.gene69459:CDS 35.0%
AATAACCAGCTGAACTAATG+AGG + chr3.3:92576466-92576485 None:intergenic 35.0%
ACAAAAGAACAGTGCAAATG+TGG + chr3.3:92576086-92576105 None:intergenic 35.0%
ACAACTATAGCATGCAAAGA+TGG + chr3.3:92574908-92574927 None:intergenic 35.0%
ACATCAATAGAAGCTAGGTA+AGG + chr3.3:92575043-92575062 None:intergenic 35.0%
AGAAGATAGTGTAGCAAAGA+GGG - chr3.3:92574489-92574508 MS.gene69459:intron 35.0%
AGTGTTAAATTAATGCTGCG+TGG - chr3.3:92573143-92573162 MS.gene69459:intron 35.0%
ATGGCAGAACTGAATCAATT+CGG + chr3.3:92575237-92575256 None:intergenic 35.0%
ATTCTAAATACTGCTGTAGC+TGG - chr3.3:92574109-92574128 MS.gene69459:intron 35.0%
CAAGAACATCAATAGAAGCT+AGG + chr3.3:92575048-92575067 None:intergenic 35.0%
CATATATAGACACAGAAGAG+GGG + chr3.3:92573709-92573728 None:intergenic 35.0%
CTCATATATAGACACAGAAG+AGG + chr3.3:92573711-92573730 None:intergenic 35.0%
CTGCAATTCTATGTGACATA+TGG + chr3.3:92576894-92576913 None:intergenic 35.0%
CTTCGATTTCATGAAATCCA+AGG + chr3.3:92572874-92572893 None:intergenic 35.0%
CTTTGCATGCTATAGTTGTA+GGG - chr3.3:92574909-92574928 MS.gene69459:intron 35.0%
GATAATGAGAAAACTGACAC+AGG + chr3.3:92575579-92575598 None:intergenic 35.0%
GATTCAGTGTGTCTACAAAT+AGG - chr3.3:92573223-92573242 MS.gene69459:intron 35.0%
GCCAATTCCATCAAAAGTAA+AGG + chr3.3:92572939-92572958 None:intergenic 35.0%
GCCACATAAAAACACTACAA+TGG + chr3.3:92573464-92573483 None:intergenic 35.0%
GCCATGATTGCTTAAGTTTA+TGG - chr3.3:92573485-92573504 MS.gene69459:intron 35.0%
TAAGGAAACAACAACTGAGT+AGG + chr3.3:92575938-92575957 None:intergenic 35.0%
TATCTTCATTTCTTCGCCAA+GGG + chr3.3:92576043-92576062 None:intergenic 35.0%
TATGTCACATAGAATTGCAG+TGG - chr3.3:92576894-92576913 MS.gene69459:CDS 35.0%
TCGATTTCATGAAATCCAAG+GGG + chr3.3:92572872-92572891 None:intergenic 35.0%
TCTAGGCATTTCATACAGAT+TGG + chr3.3:92573959-92573978 None:intergenic 35.0%
TCTTTGCATGCTATAGTTGT+AGG - chr3.3:92574908-92574927 MS.gene69459:intron 35.0%
TGAATCCACCATAAAACCTT+CGG + chr3.3:92574181-92574200 None:intergenic 35.0%
TGCTCAGACAAAGTTTGAAA+TGG - chr3.3:92574943-92574962 MS.gene69459:intron 35.0%
TGGAAATAGCAAGGAACTTA+TGG - chr3.3:92574459-92574478 MS.gene69459:intron 35.0%
TGTACATCTTGGAAATAGCA+AGG - chr3.3:92574450-92574469 MS.gene69459:intron 35.0%
TGTTCTTGTTCAGAATTCTC+AGG - chr3.3:92575060-92575079 MS.gene69459:CDS 35.0%
TTATCTTCATTTCTTCGCCA+AGG + chr3.3:92576044-92576063 None:intergenic 35.0%
TTCACAATGTTATGTGCAAG+AGG + chr3.3:92576793-92576812 None:intergenic 35.0%
TTGCATGAATCGGAATTGTT+CGG + chr3.3:92572774-92572793 None:intergenic 35.0%
TTTAAGAAACCGTCCCTTAT+TGG - chr3.3:92573432-92573451 MS.gene69459:intron 35.0%
TTTAGAAGGGACTTGAAGAT+AGG - chr3.3:92575329-92575348 MS.gene69459:CDS 35.0%
! ACTTTTTGACGTTGCTCTAT+TGG - chr3.3:92573785-92573804 MS.gene69459:intron 35.0%
! TCATGGATTGTGCTCATTTA+AGG - chr3.3:92573290-92573309 MS.gene69459:intron 35.0%
! TGATGTAAGAGAAGCTTTGA+CGG - chr3.3:92573386-92573405 MS.gene69459:intron 35.0%
! TGCCCTGCAAAAGTTTTTAA+CGG + chr3.3:92576690-92576709 None:intergenic 35.0%
! TGGTTCTCAAGGAAGTTTTA+CGG - chr3.3:92576914-92576933 MS.gene69459:CDS 35.0%
! TGTGGATTCAACTGAGTTTT+AGG - chr3.3:92576005-92576024 MS.gene69459:intron 35.0%
! TGTTTGACTTCCATGATGTA+TGG - chr3.3:92575290-92575309 MS.gene69459:intron 35.0%
!! AGTATGTATTCTGAGGTCTA+GGG - chr3.3:92574782-92574801 MS.gene69459:CDS 35.0%
!! TAGTATGTATTCTGAGGTCT+AGG - chr3.3:92574781-92574800 MS.gene69459:CDS 35.0%
!! TGTTTCTTGCTGTTTCAACT+TGG - chr3.3:92576587-92576606 MS.gene69459:CDS 35.0%
!!! GTCTAGGGTTTTTTAAATGC+AGG - chr3.3:92574797-92574816 MS.gene69459:intron 35.0%
AACACATGGATATGAACTGC+AGG + chr3.3:92573982-92574001 None:intergenic 40.0%
AACGTAGGAATACCGAATCA+GGG - chr3.3:92576210-92576229 MS.gene69459:intron 40.0%
ACGAAATGCCATTGCTTCTA+TGG + chr3.3:92575464-92575483 None:intergenic 40.0%
ATAAAACCTTCGGAAGAACG+AGG + chr3.3:92574171-92574190 None:intergenic 40.0%
ATAACCTGATCATGTTCAGC+AGG + chr3.3:92573014-92573033 None:intergenic 40.0%
ATCATAGCACCTGCAACAAA+AGG + chr3.3:92574250-92574269 None:intergenic 40.0%
ATGTTCAGCAGGATACTGAT+TGG + chr3.3:92573003-92573022 None:intergenic 40.0%
CAACTTGGCTACTCCAATTT+CGG - chr3.3:92576602-92576621 MS.gene69459:CDS 40.0%
CAAGGCAAATTGACATCGTT+TGG - chr3.3:92574674-92574693 MS.gene69459:CDS 40.0%
CACATATAACTGCAGAGTAC+TGG - chr3.3:92574275-92574294 MS.gene69459:intron 40.0%
CAGAAGATAGTGTAGCAAAG+AGG - chr3.3:92574488-92574507 MS.gene69459:intron 40.0%
GAACTGAATCAATTCGGAAG+TGG + chr3.3:92575231-92575250 None:intergenic 40.0%
GAGAGTAAAATGTTGGACAG+AGG - chr3.3:92573044-92573063 MS.gene69459:intron 40.0%
GAGCTGCAAACTTTCATGAA+AGG + chr3.3:92574861-92574880 None:intergenic 40.0%
GCGAGGGAATTATTTCAAAG+AGG - chr3.3:92574207-92574226 MS.gene69459:intron 40.0%
GCTCTGTTCCATAATCAACT+TGG + chr3.3:92575108-92575127 None:intergenic 40.0%
GTTTCCTTATGCATGCCAAT+TGG - chr3.3:92575949-92575968 MS.gene69459:intron 40.0%
TAAAACCTTCGGAAGAACGA+GGG + chr3.3:92574170-92574189 None:intergenic 40.0%
TACAGCTCTTAAAGCTGATC+TGG - chr3.3:92574084-92574103 MS.gene69459:intron 40.0%
TACAGTCACACAGAACACAT+AGG + chr3.3:92574361-92574380 None:intergenic 40.0%
TAGAATTGCAGTGGTTCTCA+AGG - chr3.3:92576903-92576922 MS.gene69459:CDS 40.0%
TCATAGCACCTGCAACAAAA+GGG + chr3.3:92574249-92574268 None:intergenic 40.0%
TCCACATGTGTAGCAAATCA+TGG - chr3.3:92573273-92573292 MS.gene69459:intron 40.0%
TGAAAGTTTGCAGCTCATTC+AGG - chr3.3:92574865-92574884 MS.gene69459:intron 40.0%
TGGCTAGAAATCACACCTTA+AGG - chr3.3:92575663-92575682 MS.gene69459:intron 40.0%
TGGTGAAATCCAATAAGGGA+CGG + chr3.3:92573444-92573463 None:intergenic 40.0%
TGTTAACAAAACCCTGACAG+TGG - chr3.3:92575015-92575034 MS.gene69459:intron 40.0%
TTAAATGCAGGTGTTTCACG+TGG - chr3.3:92574809-92574828 MS.gene69459:intron 40.0%
TTCAGTTCTGCCATCTTCAT+TGG - chr3.3:92575243-92575262 MS.gene69459:intron 40.0%
! AACTTTCATGAAAGGCACGA+AGG + chr3.3:92574853-92574872 None:intergenic 40.0%
! GAAATCGAAGCTAGTTCTCA+TGG - chr3.3:92572884-92572903 MS.gene69459:CDS 40.0%
! GAAGTGGGTGCAATATGTTT+TGG + chr3.3:92575215-92575234 None:intergenic 40.0%
! GAATTGGCGTTTTTGTTGAG+AGG - chr3.3:92572951-92572970 MS.gene69459:intron 40.0%
! GATGTAAGAGAAGCTTTGAC+GGG - chr3.3:92573387-92573406 MS.gene69459:intron 40.0%
! TAACGGTAGAATTTGGTGAG+AGG - chr3.3:92573344-92573363 MS.gene69459:intron 40.0%
! TAGGATAACATGGTGGAGAA+AGG + chr3.3:92576165-92576184 None:intergenic 40.0%
! TAGGCACTTGAATTTTCCCT+TGG - chr3.3:92576024-92576043 MS.gene69459:intron 40.0%
! TCGTTCTTCCGAAGGTTTTA+TGG - chr3.3:92574170-92574189 MS.gene69459:CDS 40.0%
! TCTCAAGGAAGTTTTACGGA+AGG - chr3.3:92576918-92576937 MS.gene69459:CDS 40.0%
! TGGTATGAAGAGAAGCACAT+TGG + chr3.3:92575412-92575431 None:intergenic 40.0%
!! CTGCGTGGAAATGTTTTAAG+AGG - chr3.3:92573158-92573177 MS.gene69459:intron 40.0%
!! CTTTGTGGTGTTGCATGAAT+CGG + chr3.3:92572784-92572803 None:intergenic 40.0%
!! GCTCTATTGGAGTTGATAGT+TGG - chr3.3:92573798-92573817 MS.gene69459:intron 40.0%
!! GTGTTGGTTCTGATGTTGTT+TGG - chr3.3:92572973-92572992 MS.gene69459:intron 40.0%
!! TAGCATTGGCGAAGAAAAGA+TGG - chr3.3:92572691-92572710 MS.gene69459:CDS 40.0%
!! TCATCTGATTGGCTTCTGAT+AGG - chr3.3:92574030-92574049 MS.gene69459:intron 40.0%
!! TCCATGATTTGCTACACATG+TGG + chr3.3:92573277-92573296 None:intergenic 40.0%
!! TGGTGGACCTTTACTTTTGA+TGG - chr3.3:92572929-92572948 MS.gene69459:intron 40.0%
!! TTCTTCCGAAGGTTTTATGG+TGG - chr3.3:92574173-92574192 MS.gene69459:CDS 40.0%
!! TTTTTCGACAGGAGTGATAG+TGG + chr3.3:92575816-92575835 None:intergenic 40.0%
AAAGGGAAGGTCATATCGAC+AGG + chr3.3:92575528-92575547 None:intergenic 45.0%
AACATACCCTAAACTCTCCC+TGG + chr3.3:92574311-92574330 None:intergenic 45.0%
AACATAGTTCACATGTGGCG+TGG - chr3.3:92573869-92573888 MS.gene69459:intron 45.0%
AACCATGTCATGTACCGCAT+TGG + chr3.3:92574653-92574672 None:intergenic 45.0%
AATAGGACCAGGGAGAGTTT+AGG - chr3.3:92574301-92574320 MS.gene69459:intron 45.0%
AATGTTGGACAGAGGAGTTC+AGG - chr3.3:92573052-92573071 MS.gene69459:intron 45.0%
ACGTAGGAATACCGAATCAG+GGG - chr3.3:92576211-92576230 MS.gene69459:intron 45.0%
ACTGTGGAGATCGTGGTTAA+TGG - chr3.3:92576724-92576743 MS.gene69459:CDS 45.0%
AGAGTCCTCATTAGTTCAGC+TGG - chr3.3:92576458-92576477 MS.gene69459:intron 45.0%
AGGCTGACTATGGGAAAGAA+AGG - chr3.3:92576835-92576854 MS.gene69459:CDS 45.0%
AGTTGGCTGTCAGATGATAC+AGG - chr3.3:92576356-92576375 MS.gene69459:intron 45.0%
ATACTGCTGTAGCTGGAAAG+TGG - chr3.3:92574116-92574135 MS.gene69459:intron 45.0%
ATAGGACCAGGGAGAGTTTA+GGG - chr3.3:92574302-92574321 MS.gene69459:intron 45.0%
ATCCAATGCGGTACATGACA+TGG - chr3.3:92574648-92574667 MS.gene69459:CDS 45.0%
ATCGTGGTTAATGGGACAAC+CGG - chr3.3:92576733-92576752 MS.gene69459:CDS 45.0%
ATTCGGTATTCCTACGTTCG+TGG + chr3.3:92576208-92576227 None:intergenic 45.0%
CAAAGACCTTCGAAGCACAA+CGG - chr3.3:92572799-92572818 MS.gene69459:CDS 45.0%
CACGAACTATCTCTTTCTGG+TGG - chr3.3:92572912-92572931 MS.gene69459:intron 45.0%
CAGGGGAGACATGTATGTTT+CGG - chr3.3:92576228-92576247 MS.gene69459:intron 45.0%
CAGGTGTTTCACGTGGTAAA+GGG - chr3.3:92574816-92574835 MS.gene69459:intron 45.0%
CATACATGTCTCCCCTGATT+CGG + chr3.3:92576225-92576244 None:intergenic 45.0%
CTGTGGAGATCGTGGTTAAT+GGG - chr3.3:92576725-92576744 MS.gene69459:CDS 45.0%
CTTCTCTTCATACCAGTCAC+GGG - chr3.3:92575417-92575436 MS.gene69459:CDS 45.0%
GAAAGGCCAACCAATGAAGA+TGG + chr3.3:92575256-92575275 None:intergenic 45.0%
GAACGTAGGAATACCGAATC+AGG - chr3.3:92576209-92576228 MS.gene69459:intron 45.0%
GAGAGTGAAAGAGAGGTTTC+TGG - chr3.3:92576864-92576883 MS.gene69459:CDS 45.0%
GAGCATGTTAGGGAATCTCT+TGG - chr3.3:92574520-92574539 MS.gene69459:intron 45.0%
GCTTCTCTTCATACCAGTCA+CGG - chr3.3:92575416-92575435 MS.gene69459:CDS 45.0%
GGCTGACTATGGGAAAGAAA+GGG - chr3.3:92576836-92576855 MS.gene69459:CDS 45.0%
GGTATGAGAGAGTGAAAGAG+AGG - chr3.3:92576857-92576876 MS.gene69459:CDS 45.0%
GGTTCTTCGTGAGCATGTTA+GGG - chr3.3:92574510-92574529 MS.gene69459:intron 45.0%
GTACTGGAAGAATAGGACCA+GGG - chr3.3:92574291-92574310 MS.gene69459:intron 45.0%
GTAGCCAATTGGCATGCATA+AGG + chr3.3:92575956-92575975 None:intergenic 45.0%
GTATCCTGCTGAACATGATC+AGG - chr3.3:92573007-92573026 MS.gene69459:intron 45.0%
GTTCTGCCATCTTCATTGGT+TGG - chr3.3:92575247-92575266 MS.gene69459:intron 45.0%
GTTGAGAAGAGGCTGACTAT+GGG - chr3.3:92576826-92576845 MS.gene69459:CDS 45.0%
TCGCACGAACTATCTCTTTC+TGG - chr3.3:92572909-92572928 MS.gene69459:intron 45.0%
TGGATATGAACTGCAGGTCT+AGG + chr3.3:92573976-92573995 None:intergenic 45.0%
TGGCAAGTCATGTTGAGAAG+AGG - chr3.3:92576815-92576834 MS.gene69459:CDS 45.0%
TGTTGAGAAGAGGCTGACTA+TGG - chr3.3:92576825-92576844 MS.gene69459:CDS 45.0%
TTCATGAAATCCAAGGGGCT+TGG + chr3.3:92572867-92572886 None:intergenic 45.0%
TTCTCTTCATACCAGTCACG+GGG - chr3.3:92575418-92575437 MS.gene69459:CDS 45.0%
TTGTGCTTCGAAGGTCTTTG+TGG + chr3.3:92572799-92572818 None:intergenic 45.0%
! ACAGCCTTTTCACCTTTTGC+AGG + chr3.3:92574061-92574080 None:intergenic 45.0%
! AGGAAGTTTTACGGAAGGCA+AGG - chr3.3:92576923-92576942 MS.gene69459:CDS 45.0%
! AGTACTGGAAGAATAGGACC+AGG - chr3.3:92574290-92574309 MS.gene69459:intron 45.0%
! CTTTTGGTCAAGTAGCCTAG+TGG - chr3.3:92575643-92575662 MS.gene69459:intron 45.0%
! GATAACATGGTGGAGAAAGG+TGG + chr3.3:92576162-92576181 None:intergenic 45.0%
! GGTGGATTCATGAAATGCGA+GGG - chr3.3:92574191-92574210 MS.gene69459:intron 45.0%
!! AGGTGTGATTTCTAGCCACT+AGG + chr3.3:92575661-92575680 None:intergenic 45.0%
!! CTGCAGAGTACTGGAAGAAT+AGG - chr3.3:92574284-92574303 MS.gene69459:intron 45.0%
!! GCGTTTTTGTTGAGAGGTGT+TGG - chr3.3:92572957-92572976 MS.gene69459:intron 45.0%
!! TGGTGGATTCATGAAATGCG+AGG - chr3.3:92574190-92574209 MS.gene69459:intron 45.0%
!!! TTATTTATTATATATTCTTT+TGG - chr3.3:92575627-92575646 MS.gene69459:intron 5.0%
AAGGTGGAGGGTTGAGCAAA+TGG + chr3.3:92576146-92576165 None:intergenic 50.0%
ACCAGATGGTGCATTTCCGA+CGG + chr3.3:92572844-92572863 None:intergenic 50.0%
AGACATGCTTCCACGAACGT+AGG - chr3.3:92576195-92576214 MS.gene69459:intron 50.0%
AGGTGGAGGGTTGAGCAAAT+GGG + chr3.3:92576145-92576164 None:intergenic 50.0%
AGTGAAGGACGTACCAGTAC+AGG + chr3.3:92575490-92575509 None:intergenic 50.0%
AGTTACCCTCGTTCTTCCGA+AGG - chr3.3:92574162-92574181 MS.gene69459:CDS 50.0%
ATAGACACAGAAGAGGGGCA+AGG + chr3.3:92573704-92573723 None:intergenic 50.0%
CAAAACATTCTCCCCGTGAC+TGG + chr3.3:92575432-92575451 None:intergenic 50.0%
CCTGCCTGCAAAAGGTGAAA+AGG - chr3.3:92574054-92574073 MS.gene69459:intron 50.0%
CGGTACATGACATGGTTGCA+AGG - chr3.3:92574656-92574675 MS.gene69459:CDS 50.0%
CTGATTCCGTTGTGCTTCGA+AGG + chr3.3:92572808-92572827 None:intergenic 50.0%
GCAGGTGTTTCACGTGGTAA+AGG - chr3.3:92574815-92574834 MS.gene69459:intron 50.0%
GGGTTCTTCGTGAGCATGTT+AGG - chr3.3:92574509-92574528 MS.gene69459:intron 50.0%
TAGACACAGAAGAGGGGCAA+GGG + chr3.3:92573703-92573722 None:intergenic 50.0%
TAGCACCTGCAACAAAAGGG+AGG + chr3.3:92574246-92574265 None:intergenic 50.0%
TAGGTAAGGAGCCACTGTCA+GGG + chr3.3:92575029-92575048 None:intergenic 50.0%
TGATAGGTCCTGCCTGCAAA+AGG - chr3.3:92574046-92574065 MS.gene69459:intron 50.0%
TTTGCTGCATCCTGAAGGCA+AGG - chr3.3:92576756-92576775 MS.gene69459:CDS 50.0%
! AACATGGTGGAGAAAGGTGG+AGG + chr3.3:92576159-92576178 None:intergenic 50.0%
! AAGCACCTCCCTTTTGTTGC+AGG - chr3.3:92574238-92574257 MS.gene69459:intron 50.0%
! ACATGGTGGAGAAAGGTGGA+GGG + chr3.3:92576158-92576177 None:intergenic 50.0%
! CAGTCACGGGGAGAATGTTT+TGG - chr3.3:92575430-92575449 MS.gene69459:CDS 50.0%
! CCTTTTCACCTTTTGCAGGC+AGG + chr3.3:92574057-92574076 None:intergenic 50.0%
! GGCGAAGCATTCAGTAGCAT+TGG - chr3.3:92572677-92572696 MS.gene69459:CDS 50.0%
! GGTAGAATTTGGTGAGAGGC+TGG - chr3.3:92573348-92573367 MS.gene69459:intron 50.0%
! TACACAGGGGTGTAGCCAAT+TGG + chr3.3:92575967-92575986 None:intergenic 50.0%
!! CACGGGGAGAATGTTTTGGA+AGG - chr3.3:92575434-92575453 MS.gene69459:CDS 50.0%
CAGATTCACCCCTCTTCCGT+CGG - chr3.3:92572825-92572844 MS.gene69459:CDS 55.0%
CAGTTGCTCTGTAGTCGCAG+AGG + chr3.3:92573621-92573640 None:intergenic 55.0%
CTAGGTAAGGAGCCACTGTC+AGG + chr3.3:92575030-92575049 None:intergenic 55.0%
CTGCATCCTGAAGGCAAGGA+TGG - chr3.3:92576760-92576779 MS.gene69459:CDS 55.0%
GCCTTCAGGATGCAGCAAAC+CGG + chr3.3:92576755-92576774 None:intergenic 55.0%
GGAGGGTTGAGCAAATGGGA+AGG + chr3.3:92576141-92576160 None:intergenic 55.0%
GGCATTTCGTCTGCCTGTAC+TGG - chr3.3:92575474-92575493 MS.gene69459:CDS 55.0%
GGTGCATTTCCGACGGAAGA+GGG + chr3.3:92572837-92572856 None:intergenic 55.0%
GTCACACCATCCTTGCCTTC+AGG + chr3.3:92576769-92576788 None:intergenic 55.0%
GTGCATTTCCGACGGAAGAG+GGG + chr3.3:92572836-92572855 None:intergenic 55.0%
GTGGCTGGATGCCGTCTTAA+AGG - chr3.3:92574135-92574154 MS.gene69459:CDS 55.0%
TCCGTCGGAAATGCACCATC+TGG - chr3.3:92572840-92572859 MS.gene69459:CDS 55.0%
TGCTCTGTAGTCGCAGAGGT+AGG + chr3.3:92573617-92573636 None:intergenic 55.0%
TGCTGTAGCTGGAAAGTGGC+TGG - chr3.3:92574120-92574139 MS.gene69459:intron 55.0%
TGGTGCATTTCCGACGGAAG+AGG + chr3.3:92572838-92572857 None:intergenic 55.0%
!! ACCGGTTTGCTGCATCCTGA+AGG - chr3.3:92576751-92576770 MS.gene69459:CDS 55.0%
ACAGAAGAGGGGCAAGGGAC+GGG + chr3.3:92573698-92573717 None:intergenic 60.0%
ACCATCTGGTCCAAGCCCCT+TGG - chr3.3:92572854-92572873 MS.gene69459:CDS 60.0%
CACAGAAGAGGGGCAAGGGA+CGG + chr3.3:92573699-92573718 None:intergenic 60.0%
GTCGCAGAGGTAGGCACAAG+CGG + chr3.3:92573608-92573627 None:intergenic 60.0%
TCCAAGGGGCTTGGACCAGA+TGG + chr3.3:92572858-92572877 None:intergenic 60.0%
!! TGGAGGCACTGTGGAGATCG+TGG - chr3.3:92576717-92576736 MS.gene69459:CDS 60.0%
!!! CTTTTGCAGGGCACTGCAGC+TGG - chr3.3:92576697-92576716 MS.gene69459:CDS 60.0%
AGAAGAGGGGCAAGGGACGG+GGG + chr3.3:92573696-92573715 None:intergenic 65.0%
CAGAAGAGGGGCAAGGGACG+GGG + chr3.3:92573697-92573716 None:intergenic 65.0%
!! CACTGCAGCTGGAGGCACTG+TGG - chr3.3:92576708-92576727 MS.gene69459:CDS 65.0%
!! TTGCAGGGCACTGCAGCTGG+AGG - chr3.3:92576700-92576719 MS.gene69459:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 92572675 92576954 92572675 ID=MS.gene69459
chr3.3 mRNA 92572675 92576954 92572675 ID=MS.gene69459.t1;Parent=MS.gene69459
chr3.3 exon 92576556 92576954 92576556 ID=MS.gene69459.t1.exon1;Parent=MS.gene69459.t1
chr3.3 CDS 92576556 92576954 92576556 ID=cds.MS.gene69459.t1;Parent=MS.gene69459.t1
chr3.3 exon 92575306 92575577 92575306 ID=MS.gene69459.t1.exon2;Parent=MS.gene69459.t1
chr3.3 CDS 92575306 92575577 92575306 ID=cds.MS.gene69459.t1;Parent=MS.gene69459.t1
chr3.3 exon 92575049 92575203 92575049 ID=MS.gene69459.t1.exon3;Parent=MS.gene69459.t1
chr3.3 CDS 92575049 92575203 92575049 ID=cds.MS.gene69459.t1;Parent=MS.gene69459.t1
chr3.3 exon 92574548 92574810 92574548 ID=MS.gene69459.t1.exon4;Parent=MS.gene69459.t1
chr3.3 CDS 92574548 92574810 92574548 ID=cds.MS.gene69459.t1;Parent=MS.gene69459.t1
chr3.3 exon 92574134 92574196 92574134 ID=MS.gene69459.t1.exon5;Parent=MS.gene69459.t1
chr3.3 CDS 92574134 92574196 92574134 ID=cds.MS.gene69459.t1;Parent=MS.gene69459.t1
chr3.3 exon 92572675 92572923 92572675 ID=MS.gene69459.t1.exon6;Parent=MS.gene69459.t1
chr3.3 CDS 92572675 92572923 92572675 ID=cds.MS.gene69459.t1;Parent=MS.gene69459.t1
Gene Sequence

>MS.gene69459

ATGGCGAAGCATTCAGTAGCATTGGCGAAGAAAAGATGGCCGTTAATGTTACTAGCTTTCATATCAATTTCAACAGTGATGATTCTTTTCATGAGACCGAACAATTCCGATTCATGCAACACCACAAAGACCTTCGAAGCACAACGGAATCAGATTCACCCCTCTTCCGTCGGAAATGCACCATCTGGTCCAAGCCCCTTGGATTTCATGAAATCGAAGCTAGTTCTCATGGTTTCGCACGAACTATCTCTTTCTGGTGGACCTTTACTTTTGATGGAATTGGCGTTTTTGTTGAGAGGTGTTGGTTCTGATGTTGTTTGGATTACCAATCAGTATCCTGCTGAACATGATCAGGTTATTTATAGTTTGGAGAGTAAAATGTTGGACAGAGGAGTTCAGGTATATTTCTCTTTTTTCTTCGCCTTTTCGTTTTGATCTTTATTGTTGTTTACGTGGTTGATTTTTTTTAGTGTTAAATTAATGCTGCGTGGAAATGTTTTAAGAGGTTTGAGTAGTTATGTTTTTCCATATTTGGAATTATGAATAGGGATTCAGTGTGTCTACAAATAGGGATTTGACTCAAATGGTTGATATTTTGTCCACATGTGTAGCAAATCATGGATTGTGCTCATTTAAGGAGAACTAGATCCTATAATTCATTGTATAAATTAACGGTAGAATTTGGTGAGAGGCTGGAGAGTGAATATGCTGTGATGTAAGAGAAGCTTTGACGGGAGTTGCTTATTGAGTTCTTAAATTTAAGAAACCGTCCCTTATTGGATTTCACCATTGTAGTGTTTTTATGTGGCAGCCATGATTGCTTAAGTTTATGGAGGATTCTCGAACACAATTGTTAGAACAGCAAACAGAAGATTAAAGAAAATGAAAATCGCAAGACAATGAAACACGATCGTTTGTTTACGCAGATCACCGCTTGTGCCTACCTCTGCGACTACAGAGCAACTGTAGTTCAGTATATATTACTTGAGTGAATTTGCAACGCTGCACTAGCTCAGCTCCCCCGTCCCTTGCCCCTCTTCTGTGTCTATATATGAGACATACTCGACAACAATCAACTCAGTTCTCTAATTTGTGATATCCACTTAATGAACTTTTTGACGTTGCTCTATTGGAGTTGATAGTTGGTTAAAGTACAATCAACTTAGATCACTAATTTGTGAGATCCATTTGATAAACATAGTTCACATGTGGCGTGGTAGAACCCACAAAAATACGAGTTAAGCAACTGTGTAATCAGTTTGATAGAGTTGGATAATAATTCCAATCTGTATGAAATGCCTAGACCTGCAGTTCATATCCATGTGTTATTGAACTTCTAAGTGTAACTTTTTTTTTCATCTGATTGGCTTCTGATAGGTCCTGCCTGCAAAAGGTGAAAAGGCTGTAGATACAGCTCTTAAAGCTGATCTGGTCATTCTAAATACTGCTGTAGCTGGAAAGTGGCTGGATGCCGTCTTAAAGGAAAAAGTTACCCTCGTTCTTCCGAAGGTTTTATGGTGGATTCATGAAATGCGAGGGAATTATTTCAAAGAGGCATATGTCAAGCACCTCCCTTTTGTTGCAGGTGCTATGATTGATTCACATATAACTGCAGAGTACTGGAAGAATAGGACCAGGGAGAGTTTAGGGTATGTTTCCAGATTCATTTAATAATATATTACTCCTATGTGTTCTGTGTGACTGTAACTTAAGTCGTGTTTCTAACTGTATGCTTTTGCCTGATTTTGTAGAATTAAAATGCCTGAAACTTATGTTGTACATCTTGGAAATAGCAAGGAACTTATGGAAGTTGCAGAAGATAGTGTAGCAAAGAGGGTTCTTCGTGAGCATGTTAGGGAATCTCTTGGAGTAAGAAATGATGATCTACTTTTTGCCATCATAAATAGTATGTCACTACCTGTACTCATTCAATATTCATTTTTCAATCATTGCATTAGTTTCATGATATTTTCATCCAATGCGGTACATGACATGGTTGCAAGGCAAATTGACATCGTTTGGCTTGTTGTTTCTCTTTTCTTTGTTATGCATGCCAATTTAATATAGTGTGTACCTCTTCTGTTCACTTTTTTACATTTCTTTTGCTAGTATGTATTCTGAGGTCTAGGGTTTTTTAAATGCAGGTGTTTCACGTGGTAAAGGGCAAAATCTATTCCTTCGTGCCTTTCATGAAAGTTTGCAGCTCATTCAGGAGAAGAAACTCAAGTTGCCATCTTTGCATGCTATAGTTGTAGGGAGTGATATGAATGCTCAGACAAAGTTTGAAATGGAACTGCGCGAATTTGTTTCAGAGAAAAAGATTCAGGACCGTGTTCATTTTGTTAACAAAACCCTGACAGTGGCTCCTTACCTAGCTTCTATTGATGTTCTTGTTCAGAATTCTCAGGTATCTTCTGATAATATACATTACCAAGTTGATTATGGAACAGAGCATGCTATGATGACTCTCAAACTTTTGACATTATGATGGCAACCCTTAAACTTTAGATTGCATGATTAAACATTTTTCCTAATTTCCAAAACATATTGCACCCACTTCCGAATTGATTCAGTTCTGCCATCTTCATTGGTTGGCCTTTCTTCTCATATCGATTTGTTTGACTTCCATGATGTATGGAGACAAAGTTTGCTAGTTTAGAAGGGACTTGAAGATAGGAATTTTTTTATTATAAATTGTGTTTAAAGTATTATTTTAGTTTTTGGGCTTCATTCACCAATGTGCTTCTCTTCATACCAGTCACGGGGAGAATGTTTTGGAAGGATAACCATAGAAGCAATGGCATTTCGTCTGCCTGTACTGGTACGTCCTTCACTAGATATTTGAGTTGTCCTGTCGATATGACCTTCCCTTTTATATCTATACGTGTTAAATTACTACTACCTGTGTCAGTTTTCTCATTATCGCATTTGACATATAATAATGTGCTTTATTTATTTATTATATATTCTTTTGGTCAAGTAGCCTAGTGGCTAGAAATCACACCTTAAGGAAATGTACATGATACGTGTTTATAATGTGCTTTATTTATACGTGTTTATAATATACTTTATTTATTCATCTTTAATCTCTTCTATCTTTCTGTCTGCCTTTTTATTATTTTGGTTTCATAATTCATACCACTATCACTCCTGTCGAAAAAAATCTAAAAAATAGAAACAAAAAAGTTACTTCATTTTTGCAATATCATAGCACCAAATTGCCTTTTTTGAATGATAACATCAGAGTAATATTTATTTTTCCTACTCAGTTGTTGTTTCCTTATGCATGCCAATTGGCTACACCCCTGTGTAACTATTTTTTTACTAATTTGTGGATTCAACTGAGTTTTAGGCACTTGAATTTTCCCTTGGCGAAGAAATGAAGATAACTGTTCAGCAACTTTAACTCCACATTTGCACTGTTCTTTTGTTTGAATATGTCAGCCTCAAATTCACTAATTTTCCTTCCCATTTGCTCAACCCTCCACCTTTCTCCACCATGTTATCCTAGTTGTTTTAAAGACATGCTTCCACGAACGTAGGAATACCGAATCAGGGGAGACATGTATGTTTCGGTTTTTGCAAGTCTGTTTTTCATGAAACTAATATTATTCTGAGGAAGTTATAGCAATATATTACCAATGCTTTGATAACATGATTGCGAAAAAATAATACTGTTAAAGTTGGCTGTCAGATGATACAGGCTCCATTCATTTGTTAGTTGCAACTTGTGTAACATTAATTGAGGTGCTGACTTATAATCAATTCTTGGTAATTTCAATTAGAGTCCTCATTAGTTCAGCTGGTTATTTTCTGTTACTGATATTGATATTCAATTAATACTCATAAATGAGACGAGAGTAAATGTTTTTATTTGAAAAAAATTTTAACGCACAATAGTAGTAAATTGTTTGTTTCTTGCTGTTTCAACTTGGCTACTCCAATTTCGGAATCTATTTGTAAACATGTTCGTACATGTCTACTTTTATTTTTTCACGTACTATTTTTGTTTCCGTTAAAAACTTTTGCAGGGCACTGCAGCTGGAGGCACTGTGGAGATCGTGGTTAATGGGACAACCGGTTTGCTGCATCCTGAAGGCAAGGATGGTGTGACACCTCTTGCACATAACATTGTGAAATTGGCAAGTCATGTTGAGAAGAGGCTGACTATGGGAAAGAAAGGGTATGAGAGAGTGAAAGAGAGGTTTCTGGAGCACCATATGTCACATAGAATTGCAGTGGTTCTCAAGGAAGTTTTACGGAAGGCAAGGCACAATTAA

Protein sequence

>MS.gene69459.t1

MAKHSVALAKKRWPLMLLAFISISTVMILFMRPNNSDSCNTTKTFEAQRNQIHPSSVGNAPSGPSPLDFMKSKLVLMVSHELSLSGGPLLLMELAFLLRGVGSDVVWITNQYPAEHDQVIYSLESKMLDRGVQVLPAKGEKAVDTALKADLVILNTAVAGKWLDAVLKEKVTLVLPKVLWWIHEMRGNYFKEAYVKHLPFVAGAMIDSHITAEYWKNRTRESLGIKMPETYVVHLGNSKELMEVAEDSVAKRVLREHVRESLGVRNDDLLFAIINSVSRGKGQNLFLRAFHESLQLIQEKKLKLPSLHAIVVGSDMNAQTKFEMELREFVSEKKIQDRVHFVNKTLTVAPYLASIDVLVQNSQSRGECFGRITIEAMAFRLPVLGTAAGGTVEIVVNGTTGLLHPEGKDGVTPLAHNIVKLASHVEKRLTMGKKGYERVKERFLEHHMSHRIAVVLKEVLRKARHN