Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045265.t1 | XP_003601798.1 | 97.8 | 182 | 4 | 0 | 1 | 182 | 1 | 182 | 1.20E-93 | 352.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045265.t1 | P51413 | 88.0 | 175 | 21 | 0 | 1 | 175 | 1 | 175 | 2.9e-83 | 309.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045265.t1 | G7JC06 | 97.8 | 182 | 4 | 0 | 1 | 182 | 1 | 182 | 8.8e-94 | 352.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045265.t1 | MTR_3g085490 | 97.802 | 182 | 4 | 0 | 1 | 182 | 1 | 182 | 8.56e-135 | 374 |
| MS.gene045265.t1 | MTR_8g080460 | 97.688 | 173 | 4 | 0 | 1 | 173 | 1 | 173 | 1.12e-127 | 356 |
| MS.gene045265.t1 | MTR_3g085490 | 98.137 | 161 | 3 | 0 | 1 | 161 | 1 | 161 | 1.33e-119 | 335 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045265.t1 | AT1G67430 | 88.000 | 175 | 21 | 0 | 1 | 175 | 1 | 175 | 1.00e-115 | 326 |
| MS.gene045265.t1 | AT1G27400 | 88.953 | 172 | 19 | 0 | 1 | 172 | 1 | 172 | 3.05e-115 | 325 |
| MS.gene045265.t1 | AT1G67430 | 65.143 | 175 | 17 | 1 | 1 | 175 | 1 | 131 | 1.04e-72 | 215 |
Find 55 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTGTTTGTTGCCAAC+TGG | 0.236433 | 3.2:-73327548 | None:intergenic |
| AACATCTTCTAAGTATCTTT+TGG | 0.263817 | 3.2:-73326879 | None:intergenic |
| AACAACGCAATACCTCTTTC+TGG | 0.294555 | 3.2:-73327444 | None:intergenic |
| AAGATACTTAGAAGATGTTT+TGG | 0.295183 | 3.2:+73326883 | MS.gene045265:CDS |
| GGTGGGATTGTCGGGCTCTT+TGG | 0.298164 | 3.2:-73325731 | None:intergenic |
| CTTCTTGTTTGTTGCCAACT+GGG | 0.310845 | 3.2:-73327547 | None:intergenic |
| GTTTGTTGCCAACTGGGTCT+CGG | 0.315567 | 3.2:-73327541 | None:intergenic |
| AACCCTAAGGTCAGCACCTC+TGG | 0.343663 | 3.2:-73325873 | None:intergenic |
| GACGTTTCTGTCGTGGTGTT+GGG | 0.366723 | 3.2:+73326930 | MS.gene045265:CDS |
| AGGCCAGAGGTGCTGACCTT+AGG | 0.368932 | 3.2:+73325870 | MS.gene045265:CDS |
| TAGAGTGTCTGTTCTTAGCT+TGG | 0.376754 | 3.2:-73326961 | None:intergenic |
| TGACCTTAGGGTTCATTTCA+AGG | 0.383447 | 3.2:+73325883 | MS.gene045265:CDS |
| AAGGTCAGCACCTCTGGCCT+TGG | 0.384955 | 3.2:-73325867 | None:intergenic |
| TTACATTTGGTGGGATTGTC+GGG | 0.385846 | 3.2:-73325739 | None:intergenic |
| GGCCAGAGGTGCTGACCTTA+GGG | 0.395315 | 3.2:+73325871 | MS.gene045265:CDS |
| AGACGTTTCTGTCGTGGTGT+TGG | 0.397264 | 3.2:+73326929 | MS.gene045265:CDS |
| AGAGTGTCTGTTCTTAGCTT+GGG | 0.404467 | 3.2:-73326960 | None:intergenic |
| GCTAAGAACAGACACTCTAA+TGG | 0.408761 | 3.2:+73326965 | MS.gene045265:CDS |
| TTTGTTGCCAACTGGGTCTC+GGG | 0.429555 | 3.2:-73327540 | None:intergenic |
| GGGAAACAGCGTTTGCCATC+AGG | 0.433818 | 3.2:+73326837 | MS.gene045265:CDS |
| ATTACATTTGGTGGGATTGT+CGG | 0.454131 | 3.2:-73325740 | None:intergenic |
| TCACTTCTAGGTGAAAGGTT+TGG | 0.454273 | 3.2:+73327176 | MS.gene045265:intron |
| CTAAGAACAGACACTCTAAT+GGG | 0.469410 | 3.2:+73326966 | MS.gene045265:CDS |
| GATGGCAAACGCTGTTTCCC+TGG | 0.472125 | 3.2:-73326834 | None:intergenic |
| ATGAATTTAGCTGACTTGAC+AGG | 0.481469 | 3.2:-73327001 | None:intergenic |
| TGAAAGGAATGGCCTGTTTG+TGG | 0.487121 | 3.2:-73326907 | None:intergenic |
| AACAAAGAAGACGTACCTAC+AGG | 0.490498 | 3.2:+73327247 | MS.gene045265:CDS |
| GAAAGGAATGGCCTGTTTGT+GGG | 0.496437 | 3.2:-73326906 | None:intergenic |
| CCTTTCAGACGTTTCTGTCG+TGG | 0.497413 | 3.2:+73326923 | MS.gene045265:CDS |
| ATTGTTCACTTCTAGGTGAA+AGG | 0.499870 | 3.2:+73327171 | MS.gene045265:intron |
| AGACGTACCTACAGGGCTCA+TGG | 0.520971 | 3.2:+73327255 | MS.gene045265:CDS |
| ACTCTAATGGGCAAGGACGC+TGG | 0.524787 | 3.2:+73326978 | MS.gene045265:CDS |
| AGAGAGGAATTACATTTGGT+GGG | 0.528638 | 3.2:-73325748 | None:intergenic |
| TCTCTACGTGTCTCATATCC+AGG | 0.529280 | 3.2:+73327209 | MS.gene045265:CDS |
| GAGAGAGGAATTACATTTGG+TGG | 0.535354 | 3.2:-73325749 | None:intergenic |
| ATCTGTAATTGCAGCAACCA+AGG | 0.554826 | 3.2:+73325850 | MS.gene045265:intron |
| GGTCAGGGGCAACTTCCTGA+TGG | 0.558655 | 3.2:-73326852 | None:intergenic |
| GGAAGAGGCTGTCCAGAAAG+AGG | 0.559016 | 3.2:+73327432 | MS.gene045265:CDS |
| GATTCTTCCATGAGCCCTGT+AGG | 0.559080 | 3.2:-73327262 | None:intergenic |
| TTACCTTGAAATGAACCCTA+AGG | 0.566981 | 3.2:-73325886 | None:intergenic |
| GATACTATCTGAGAAGGAAG+AGG | 0.578357 | 3.2:+73327417 | MS.gene045265:CDS |
| CCACGACAGAAACGTCTGAA+AGG | 0.578584 | 3.2:-73326923 | None:intergenic |
| CTAGGTGAAAGGTTTGGATG+TGG | 0.599987 | 3.2:+73327182 | MS.gene045265:intron |
| TCTGTAGCCCGAGACCCAGT+TGG | 0.601405 | 3.2:+73327533 | MS.gene045265:intron |
| GTTTCTGTCGTGGTGTTGGG+AGG | 0.606753 | 3.2:+73326933 | MS.gene045265:CDS |
| CTCTTTGGAGTACTTCACCA+TGG | 0.611437 | 3.2:-73325716 | None:intergenic |
| ACAAAGAAGACGTACCTACA+GGG | 0.613276 | 3.2:+73327248 | MS.gene045265:CDS |
| CGAACTGATACTATCTGAGA+AGG | 0.615825 | 3.2:+73327411 | MS.gene045265:CDS |
| AACAGACACTCTAATGGGCA+AGG | 0.616551 | 3.2:+73326971 | MS.gene045265:CDS |
| ACAGAAACGTCTGAAAGGAA+TGG | 0.620803 | 3.2:-73326918 | None:intergenic |
| AAGTCTCAAGCTGTTCGAAG+TGG | 0.631486 | 3.2:+73327570 | MS.gene045265:CDS |
| AGTATCAGTTCGATGTGGCA+AGG | 0.635093 | 3.2:-73327400 | None:intergenic |
| ATTGCAGCAACCAAGGCCAG+AGG | 0.682613 | 3.2:+73325857 | MS.gene045265:intron |
| GTGGCAAGGAGATGACATGT+AGG | 0.691037 | 3.2:-73327386 | None:intergenic |
| CAGATAGTATCAGTTCGATG+TGG | 0.705561 | 3.2:-73327405 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATAAATACATATGAA+GGG | - | chr3.2:73326575-73326594 | None:intergenic | 10.0% |
| !! | TTAAAAATAAATACATATGA+AGG | - | chr3.2:73326576-73326595 | None:intergenic | 10.0% |
| !!! | AATTAACTTTTTTATCCAAA+AGG | - | chr3.2:73326304-73326323 | None:intergenic | 15.0% |
| !! | GATTAATTTAACCTAATTTG+TGG | + | chr3.2:73325822-73325841 | MS.gene045265:intron | 20.0% |
| !! | TATTATTCATAATCTTGTCA+AGG | + | chr3.2:73326088-73326107 | MS.gene045265:intron | 20.0% |
| !!! | CGGTGTTTTTTTTTTTTTTT+TGG | + | chr3.2:73327360-73327379 | MS.gene045265:intron | 20.0% |
| ! | ACAAAATGCAATTTCTCTAT+AGG | - | chr3.2:73326249-73326268 | None:intergenic | 25.0% |
| ! | ATTAGTTGAAAATGGTCATT+TGG | + | chr3.2:73326535-73326554 | MS.gene045265:intron | 25.0% |
| ! | GCATTCTTATACTTATATAC+TGG | + | chr3.2:73327337-73327356 | MS.gene045265:intron | 25.0% |
| ! | TTCTTATACTTATATACTGG+CGG | + | chr3.2:73327340-73327359 | MS.gene045265:intron | 25.0% |
| !! | AACATCTTCTAAGTATCTTT+TGG | - | chr3.2:73326882-73326901 | None:intergenic | 25.0% |
| !! | AAGATACTTAGAAGATGTTT+TGG | + | chr3.2:73326883-73326902 | MS.gene045265:CDS | 25.0% |
| !! | ATCAGTAGATTAGTTGAAAA+TGG | + | chr3.2:73326527-73326546 | MS.gene045265:intron | 25.0% |
| !!! | ACTTTTTTATCCAAAAGGTA+AGG | - | chr3.2:73326299-73326318 | None:intergenic | 25.0% |
| AAACATAAGCCAATCCAAAA+GGG | - | chr3.2:73326039-73326058 | None:intergenic | 30.0% | |
| AAGTCATAAGTTCTCACTAA+CGG | - | chr3.2:73326150-73326169 | None:intergenic | 30.0% | |
| ACAGATCAAAACCACAAATT+AGG | - | chr3.2:73325836-73325855 | None:intergenic | 30.0% | |
| AGTGGAGATGAAAATTCAAA+AGG | - | chr3.2:73327476-73327495 | None:intergenic | 30.0% | |
| CAATTTCTCTATAGGACATA+GGG | - | chr3.2:73326241-73326260 | None:intergenic | 30.0% | |
| CTAAGAACAAAAACAACAAC+AGG | - | chr3.2:73326767-73326786 | None:intergenic | 30.0% | |
| GTAGAGATAGATCATGATAT+AGG | + | chr3.2:73325938-73325957 | MS.gene045265:intron | 30.0% | |
| TAAGCACTAATGAGAATCTT+TGG | - | chr3.2:73326506-73326525 | None:intergenic | 30.0% | |
| TAGCTGATCTAGTGAATTTA+CGG | + | chr3.2:73326012-73326031 | MS.gene045265:intron | 30.0% | |
| TATTCTTATTCGTGTTTGGA+TGG | + | chr3.2:73327300-73327319 | MS.gene045265:intron | 30.0% | |
| TTGTTTGATTGTTCACTTCT+AGG | + | chr3.2:73327164-73327183 | MS.gene045265:intron | 30.0% | |
| ! | ATTTTCATCTCCACTCTAAA+AGG | + | chr3.2:73327481-73327500 | MS.gene045265:intron | 30.0% |
| !! | TTTTCATCTCCACTCTAAAA+GGG | + | chr3.2:73327482-73327501 | MS.gene045265:intron | 30.0% |
| !!! | TTCTAAGTATCTTTTGGCTT+TGG | - | chr3.2:73326876-73326895 | None:intergenic | 30.0% |
| AGAGAGGAATTACATTTGGT+GGG | - | chr3.2:73325751-73325770 | None:intergenic | 35.0% | |
| AGCTGATCTAGTGAATTTAC+GGG | + | chr3.2:73326013-73326032 | MS.gene045265:intron | 35.0% | |
| ATACATATGAAGGGCAAGTT+TGG | - | chr3.2:73326566-73326585 | None:intergenic | 35.0% | |
| ATCGAGAGAGGAATTACATT+TGG | - | chr3.2:73325755-73325774 | None:intergenic | 35.0% | |
| ATGAAAGAAGAAATCGAGAG+AGG | - | chr3.2:73325767-73325786 | None:intergenic | 35.0% | |
| ATTGTTCACTTCTAGGTGAA+AGG | + | chr3.2:73327171-73327190 | MS.gene045265:intron | 35.0% | |
| CAAACATAAGCCAATCCAAA+AGG | - | chr3.2:73326040-73326059 | None:intergenic | 35.0% | |
| CTAAGAACAGACACTCTAAT+GGG | + | chr3.2:73326966-73326985 | MS.gene045265:CDS | 35.0% | |
| GCAATTTCTCTATAGGACAT+AGG | - | chr3.2:73326242-73326261 | None:intergenic | 35.0% | |
| GCACTATTCTTATTCGTGTT+TGG | + | chr3.2:73327296-73327315 | MS.gene045265:intron | 35.0% | |
| TATAGGACATAGGGTTCATT+TGG | - | chr3.2:73326232-73326251 | None:intergenic | 35.0% | |
| TTACCTTGAAATGAACCCTA+AGG | - | chr3.2:73325889-73325908 | None:intergenic | 35.0% | |
| TTATTTCCCTATGCTCTCAA+AGG | - | chr3.2:73326438-73326457 | None:intergenic | 35.0% | |
| ! | AACTATCCTTTGAGAGCATA+GGG | + | chr3.2:73326429-73326448 | MS.gene045265:intron | 35.0% |
| ! | ATTACATTTGGTGGGATTGT+CGG | - | chr3.2:73325743-73325762 | None:intergenic | 35.0% |
| ! | GAGAATCTTTGGAAGACATA+TGG | - | chr3.2:73326495-73326514 | None:intergenic | 35.0% |
| ! | TTATAACCTGCCTTACCTTT+TGG | + | chr3.2:73326286-73326305 | MS.gene045265:intron | 35.0% |
| ! | TTTTATCCAAAAGGTAAGGC+AGG | - | chr3.2:73326295-73326314 | None:intergenic | 35.0% |
| !! | ATGAATTTAGCTGACTTGAC+AGG | - | chr3.2:73327004-73327023 | None:intergenic | 35.0% |
| !! | GATACAATACCCTTTTAGAG+TGG | - | chr3.2:73327494-73327513 | None:intergenic | 35.0% |
| !! | TCAAATTTGGTGGACTAGTT+TGG | + | chr3.2:73326721-73326740 | MS.gene045265:intron | 35.0% |
| AACAAAGAAGACGTACCTAC+AGG | + | chr3.2:73327247-73327266 | MS.gene045265:CDS | 40.0% | |
| AACAACGCAATACCTCTTTC+TGG | - | chr3.2:73327447-73327466 | None:intergenic | 40.0% | |
| ACAAAGAAGACGTACCTACA+GGG | + | chr3.2:73327248-73327267 | MS.gene045265:CDS | 40.0% | |
| ACAGAAACGTCTGAAAGGAA+TGG | - | chr3.2:73326921-73326940 | None:intergenic | 40.0% | |
| ACCATCATGGCAAATCAAGT+GGG | - | chr3.2:73326641-73326660 | None:intergenic | 40.0% | |
| ATCTGTAATTGCAGCAACCA+AGG | + | chr3.2:73325850-73325869 | MS.gene045265:intron | 40.0% | |
| CAGATAGTATCAGTTCGATG+TGG | - | chr3.2:73327408-73327427 | None:intergenic | 40.0% | |
| CGAACTGATACTATCTGAGA+AGG | + | chr3.2:73327411-73327430 | MS.gene045265:CDS | 40.0% | |
| GAGAGAGGAATTACATTTGG+TGG | - | chr3.2:73325752-73325771 | None:intergenic | 40.0% | |
| GATACTATCTGAGAAGGAAG+AGG | + | chr3.2:73327417-73327436 | MS.gene045265:CDS | 40.0% | |
| GCTAAGAACAGACACTCTAA+TGG | + | chr3.2:73326965-73326984 | MS.gene045265:CDS | 40.0% | |
| TCACTTCTAGGTGAAAGGTT+TGG | + | chr3.2:73327176-73327195 | MS.gene045265:intron | 40.0% | |
| TCCACCAAATTTGACACCAA+GGG | - | chr3.2:73326715-73326734 | None:intergenic | 40.0% | |
| TGACCTTAGGGTTCATTTCA+AGG | + | chr3.2:73325883-73325902 | MS.gene045265:CDS | 40.0% | |
| TGCAGTTTGATGCGTTTAAC+TGG | + | chr3.2:73327121-73327140 | MS.gene045265:intron | 40.0% | |
| ! | AGAGTGTCTGTTCTTAGCTT+GGG | - | chr3.2:73326963-73326982 | None:intergenic | 40.0% |
| ! | ATTTTACTGTGCAGAACACC+AGG | + | chr3.2:73326816-73326835 | MS.gene045265:intron | 40.0% |
| ! | CTTCTTGTTTGTTGCCAACT+GGG | - | chr3.2:73327550-73327569 | None:intergenic | 40.0% |
| ! | GAACTATCCTTTGAGAGCAT+AGG | + | chr3.2:73326428-73326447 | MS.gene045265:intron | 40.0% |
| ! | GGCAAATCAAGTGGGTTTAA+AGG | - | chr3.2:73326633-73326652 | None:intergenic | 40.0% |
| ! | TAGAGTGTCTGTTCTTAGCT+TGG | - | chr3.2:73326964-73326983 | None:intergenic | 40.0% |
| ! | TCTTCTTGTTTGTTGCCAAC+TGG | - | chr3.2:73327551-73327570 | None:intergenic | 40.0% |
| ! | TTACATTTGGTGGGATTGTC+GGG | - | chr3.2:73325742-73325761 | None:intergenic | 40.0% |
| ! | TTTTACTGTGCAGAACACCA+GGG | + | chr3.2:73326817-73326836 | MS.gene045265:intron | 40.0% |
| !! | GTTTTTGAGCTTGATTGACC+TGG | - | chr3.2:73327230-73327249 | None:intergenic | 40.0% |
| !! | TTTCCCCTTGGTGTCAAATT+TGG | + | chr3.2:73326708-73326727 | MS.gene045265:intron | 40.0% |
| !!! | AGTATCTTTTGGCTTTGGTC+AGG | - | chr3.2:73326871-73326890 | None:intergenic | 40.0% |
| !!! | GTATCTTTTGGCTTTGGTCA+GGG | - | chr3.2:73326870-73326889 | None:intergenic | 40.0% |
| !!! | TATCTTTTGGCTTTGGTCAG+GGG | - | chr3.2:73326869-73326888 | None:intergenic | 40.0% |
| AACAAACCTGAGACCTTTGG+AGG | - | chr3.2:73326690-73326709 | None:intergenic | 45.0% | |
| AAGTCTCAAGCTGTTCGAAG+TGG | + | chr3.2:73327570-73327589 | MS.gene045265:CDS | 45.0% | |
| AGTATCAGTTCGATGTGGCA+AGG | - | chr3.2:73327403-73327422 | None:intergenic | 45.0% | |
| CACCATCATGGCAAATCAAG+TGG | - | chr3.2:73326642-73326661 | None:intergenic | 45.0% | |
| CCACCAAATTTGACACCAAG+GGG | - | chr3.2:73326714-73326733 | None:intergenic | 45.0% | |
| CTAGGTGAAAGGTTTGGATG+TGG | + | chr3.2:73327182-73327201 | MS.gene045265:intron | 45.0% | |
| GAAAGGAATGGCCTGTTTGT+GGG | - | chr3.2:73326909-73326928 | None:intergenic | 45.0% | |
| GATCAGCTATTCTGACAGCT+CGG | - | chr3.2:73326001-73326020 | None:intergenic | 45.0% | |
| GGAAACAAACCTGAGACCTT+TGG | - | chr3.2:73326693-73326712 | None:intergenic | 45.0% | |
| GTCCACCAAATTTGACACCA+AGG | - | chr3.2:73326716-73326735 | None:intergenic | 45.0% | |
| TCTCTACGTGTCTCATATCC+AGG | + | chr3.2:73327209-73327228 | MS.gene045265:CDS | 45.0% | |
| TGAAAGGAATGGCCTGTTTG+TGG | - | chr3.2:73326910-73326929 | None:intergenic | 45.0% | |
| ! | AACAGACACTCTAATGGGCA+AGG | + | chr3.2:73326971-73326990 | MS.gene045265:CDS | 45.0% |
| ! | AGTGAATTTACGGGCCCTTT+TGG | + | chr3.2:73326022-73326041 | MS.gene045265:intron | 45.0% |
| ! | ATTTACGGGCCCTTTTGGAT+TGG | + | chr3.2:73326027-73326046 | MS.gene045265:intron | 45.0% |
| !! | ACCCACTTGATTTGCCATGA+TGG | + | chr3.2:73326637-73326656 | MS.gene045265:intron | 45.0% |
| !! | TGCCATGATGGTGTTGACTT+GGG | + | chr3.2:73326649-73326668 | MS.gene045265:intron | 45.0% |
| !! | TTGCCATGATGGTGTTGACT+TGG | + | chr3.2:73326648-73326667 | MS.gene045265:intron | 45.0% |
| !!! | AGATGTTTTGGCCCACAAAC+AGG | + | chr3.2:73326895-73326914 | MS.gene045265:CDS | 45.0% |
| AGACGTTTCTGTCGTGGTGT+TGG | + | chr3.2:73326929-73326948 | MS.gene045265:CDS | 50.0% | |
| CCACGACAGAAACGTCTGAA+AGG | - | chr3.2:73326926-73326945 | None:intergenic | 50.0% | |
| CCTTTCAGACGTTTCTGTCG+TGG | + | chr3.2:73326923-73326942 | MS.gene045265:CDS | 50.0% | |
| GACGTTTCTGTCGTGGTGTT+GGG | + | chr3.2:73326930-73326949 | MS.gene045265:CDS | 50.0% | |
| GATTCTTCCATGAGCCCTGT+AGG | - | chr3.2:73327265-73327284 | None:intergenic | 50.0% | |
| GTGGCAAGGAGATGACATGT+AGG | - | chr3.2:73327389-73327408 | None:intergenic | 50.0% | |
| TTTGTTGCCAACTGGGTCTC+GGG | - | chr3.2:73327543-73327562 | None:intergenic | 50.0% | |
| ! | GTCTCAGGTTTGTTTCCCCT+TGG | + | chr3.2:73326696-73326715 | MS.gene045265:intron | 50.0% |
| ! | GTTTGTTGCCAACTGGGTCT+CGG | - | chr3.2:73327544-73327563 | None:intergenic | 50.0% |
| !! | CCCCTTGGTGTCAAATTTGG+TGG | + | chr3.2:73326711-73326730 | MS.gene045265:intron | 50.0% |
| !! | GCCATGATGGTGTTGACTTG+GGG | + | chr3.2:73326650-73326669 | MS.gene045265:intron | 50.0% |
| AACCCTAAGGTCAGCACCTC+TGG | - | chr3.2:73325876-73325895 | None:intergenic | 55.0% | |
| AGACGTACCTACAGGGCTCA+TGG | + | chr3.2:73327255-73327274 | MS.gene045265:CDS | 55.0% | |
| AGTGCTCCTCCAAAGGTCTC+AGG | + | chr3.2:73326681-73326700 | MS.gene045265:intron | 55.0% | |
| ATTGCAGCAACCAAGGCCAG+AGG | + | chr3.2:73325857-73325876 | MS.gene045265:intron | 55.0% | |
| GCCCCAAGTCAACACCATCA+TGG | - | chr3.2:73326654-73326673 | None:intergenic | 55.0% | |
| GGAAGAGGCTGTCCAGAAAG+AGG | + | chr3.2:73327432-73327451 | MS.gene045265:CDS | 55.0% | |
| GGGAAACAGCGTTTGCCATC+AGG | + | chr3.2:73326837-73326856 | MS.gene045265:CDS | 55.0% | |
| ! | ACTCTAATGGGCAAGGACGC+TGG | + | chr3.2:73326978-73326997 | MS.gene045265:CDS | 55.0% |
| ! | GATGGCAAACGCTGTTTCCC+TGG | - | chr3.2:73326837-73326856 | None:intergenic | 55.0% |
| ! | GTTTCTGTCGTGGTGTTGGG+AGG | + | chr3.2:73326933-73326952 | MS.gene045265:CDS | 55.0% |
| !! | ATGGTGTTGACTTGGGGCCT+TGG | + | chr3.2:73326656-73326675 | MS.gene045265:intron | 55.0% |
| !! | CTTGGAGAGTGCTCCTCCAA+AGG | + | chr3.2:73326674-73326693 | MS.gene045265:intron | 55.0% |
| !! | CTTTGGAGGAGCACTCTCCA+AGG | - | chr3.2:73326676-73326695 | None:intergenic | 55.0% |
| AAGGTCAGCACCTCTGGCCT+TGG | - | chr3.2:73325870-73325889 | None:intergenic | 60.0% | |
| GGTCAGGGGCAACTTCCTGA+TGG | - | chr3.2:73326855-73326874 | None:intergenic | 60.0% | |
| GGTGGGATTGTCGGGCTCTT+TGG | - | chr3.2:73325734-73325753 | None:intergenic | 60.0% | |
| TCTGTAGCCCGAGACCCAGT+TGG | + | chr3.2:73327533-73327552 | MS.gene045265:intron | 60.0% | |
| !! | AGGCCAGAGGTGCTGACCTT+AGG | + | chr3.2:73325870-73325889 | MS.gene045265:CDS | 60.0% |
| !! | GGCCAGAGGTGCTGACCTTA+GGG | + | chr3.2:73325871-73325890 | MS.gene045265:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 73325718 | 73327605 | 73325718 | ID=MS.gene045265 |
| chr3.2 | mRNA | 73325718 | 73327605 | 73325718 | ID=MS.gene045265.t1;Parent=MS.gene045265 |
| chr3.2 | exon | 73325718 | 73325757 | 73325718 | ID=MS.gene045265.t1.exon1;Parent=MS.gene045265.t1 |
| chr3.2 | CDS | 73325718 | 73325757 | 73325718 | ID=cds.MS.gene045265.t1;Parent=MS.gene045265.t1 |
| chr3.2 | exon | 73325864 | 73325904 | 73325864 | ID=MS.gene045265.t1.exon2;Parent=MS.gene045265.t1 |
| chr3.2 | CDS | 73325864 | 73325904 | 73325864 | ID=cds.MS.gene045265.t1;Parent=MS.gene045265.t1 |
| chr3.2 | exon | 73326830 | 73327060 | 73326830 | ID=MS.gene045265.t1.exon3;Parent=MS.gene045265.t1 |
| chr3.2 | CDS | 73326830 | 73327060 | 73326830 | ID=cds.MS.gene045265.t1;Parent=MS.gene045265.t1 |
| chr3.2 | exon | 73327186 | 73327288 | 73327186 | ID=MS.gene045265.t1.exon4;Parent=MS.gene045265.t1 |
| chr3.2 | CDS | 73327186 | 73327288 | 73327186 | ID=cds.MS.gene045265.t1;Parent=MS.gene045265.t1 |
| chr3.2 | exon | 73327386 | 73327453 | 73327386 | ID=MS.gene045265.t1.exon5;Parent=MS.gene045265.t1 |
| chr3.2 | CDS | 73327386 | 73327453 | 73327386 | ID=cds.MS.gene045265.t1;Parent=MS.gene045265.t1 |
| chr3.2 | exon | 73327540 | 73327605 | 73327540 | ID=MS.gene045265.t1.exon6;Parent=MS.gene045265.t1 |
| chr3.2 | CDS | 73327540 | 73327605 | 73327540 | ID=cds.MS.gene045265.t1;Parent=MS.gene045265.t1 |
| Gene Sequence |
| Protein sequence |
