Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071987.t1 | XP_003593096.1 | 98.9 | 181 | 2 | 0 | 1 | 181 | 48 | 228 | 1.70E-95 | 358.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071987.t1 | A4FV84 | 53.3 | 165 | 76 | 1 | 1 | 165 | 48 | 211 | 4.9e-43 | 175.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071987.t1 | A2Q489 | 98.9 | 181 | 2 | 0 | 1 | 181 | 48 | 228 | 1.2e-95 | 358.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049178 | MS.gene071987 | 0.807117 | 5.91E-50 | -1.69E-46 |
| MS.gene049350 | MS.gene071987 | 0.801308 | 9.57E-49 | -1.69E-46 |
| MS.gene049441 | MS.gene071987 | 0.808887 | 2.48E-50 | -1.69E-46 |
| MS.gene049473 | MS.gene071987 | 0.809201 | 2.13E-50 | -1.69E-46 |
| MS.gene049580 | MS.gene071987 | 0.814832 | 1.26E-51 | -1.69E-46 |
| MS.gene049824 | MS.gene071987 | 0.850862 | 1.29E-60 | -1.69E-46 |
| MS.gene049825 | MS.gene071987 | 0.867801 | 1.05E-65 | -1.69E-46 |
| MS.gene049873 | MS.gene071987 | 0.831523 | 1.59E-55 | -1.69E-46 |
| MS.gene050277 | MS.gene071987 | 0.820197 | 7.79E-53 | -1.69E-46 |
| MS.gene050303 | MS.gene071987 | 0.855395 | 6.49E-62 | -1.69E-46 |
| MS.gene050838 | MS.gene071987 | 0.800194 | 1.62E-48 | -1.69E-46 |
| MS.gene050885 | MS.gene071987 | 0.808035 | 3.77E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene071987 | 0.802048 | 6.75E-49 | -1.69E-46 |
| MS.gene051330 | MS.gene071987 | 0.831946 | 1.25E-55 | -1.69E-46 |
| MS.gene051451 | MS.gene071987 | 0.81442 | 1.55E-51 | -1.69E-46 |
| MS.gene051676 | MS.gene071987 | 0.808965 | 2.39E-50 | -1.69E-46 |
| MS.gene051700 | MS.gene071987 | 0.875156 | 3.85E-68 | -1.69E-46 |
| MS.gene051746 | MS.gene071987 | 0.847051 | 1.48E-59 | -1.69E-46 |
| MS.gene051748 | MS.gene071987 | 0.838944 | 2.13E-57 | -1.69E-46 |
| MS.gene05188 | MS.gene071987 | 0.877865 | 4.46E-69 | -1.69E-46 |
| MS.gene051903 | MS.gene071987 | 0.837349 | 5.48E-57 | -1.69E-46 |
| MS.gene051975 | MS.gene071987 | 0.860351 | 2.19E-63 | -1.69E-46 |
| MS.gene052582 | MS.gene071987 | 0.801269 | 9.75E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene071987 | 0.815132 | 1.08E-51 | -1.69E-46 |
| MS.gene052717 | MS.gene071987 | 0.818696 | 1.71E-52 | -1.69E-46 |
| MS.gene052889 | MS.gene071987 | 0.802085 | 6.63E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene071987 | 0.873098 | 1.91E-67 | -1.69E-46 |
| MS.gene053058 | MS.gene071987 | 0.81528 | 1.00E-51 | -1.69E-46 |
| MS.gene053122 | MS.gene071987 | 0.840977 | 6.28E-58 | -1.69E-46 |
| MS.gene053226 | MS.gene071987 | 0.855187 | 7.46E-62 | -1.69E-46 |
| MS.gene053294 | MS.gene071987 | 0.809752 | 1.62E-50 | -1.69E-46 |
| MS.gene053298 | MS.gene071987 | 0.803916 | 2.77E-49 | -1.69E-46 |
| MS.gene05365 | MS.gene071987 | 0.82957 | 4.78E-55 | -1.69E-46 |
| MS.gene053786 | MS.gene071987 | 0.81668 | 4.88E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene071987 | 0.800476 | 1.42E-48 | -1.69E-46 |
| MS.gene054576 | MS.gene071987 | 0.801612 | 8.29E-49 | -1.69E-46 |
| MS.gene054967 | MS.gene071987 | 0.811206 | 7.86E-51 | -1.69E-46 |
| MS.gene055313 | MS.gene071987 | 0.800554 | 1.36E-48 | -1.69E-46 |
| MS.gene055513 | MS.gene071987 | 0.802276 | 6.06E-49 | -1.69E-46 |
| MS.gene055555 | MS.gene071987 | 0.859726 | 3.39E-63 | -1.69E-46 |
| MS.gene055580 | MS.gene071987 | -0.804091 | 2.55E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene071987 | 0.855578 | 5.74E-62 | -1.69E-46 |
| MS.gene055778 | MS.gene071987 | 0.824374 | 8.35E-54 | -1.69E-46 |
| MS.gene055808 | MS.gene071987 | 0.874859 | 4.86E-68 | -1.69E-46 |
| MS.gene056043 | MS.gene071987 | -0.812731 | 3.66E-51 | -1.69E-46 |
| MS.gene056075 | MS.gene071987 | 0.805972 | 1.03E-49 | -1.69E-46 |
| MS.gene056091 | MS.gene071987 | 0.885781 | 6.05E-72 | -1.69E-46 |
| MS.gene056215 | MS.gene071987 | 0.832938 | 7.10E-56 | -1.69E-46 |
| MS.gene056403 | MS.gene071987 | 0.908749 | 1.22E-81 | -1.69E-46 |
| MS.gene056605 | MS.gene071987 | 0.909354 | 6.25E-82 | -1.69E-46 |
| MS.gene056631 | MS.gene071987 | 0.868588 | 5.84E-66 | -1.69E-46 |
| MS.gene05689 | MS.gene071987 | 0.893715 | 4.85E-75 | -1.69E-46 |
| MS.gene056986 | MS.gene071987 | 0.869384 | 3.22E-66 | -1.69E-46 |
| MS.gene057094 | MS.gene071987 | 0.838393 | 2.95E-57 | -1.69E-46 |
| MS.gene057102 | MS.gene071987 | 0.814829 | 1.26E-51 | -1.69E-46 |
| MS.gene057360 | MS.gene071987 | 0.807045 | 6.12E-50 | -1.69E-46 |
| MS.gene057705 | MS.gene071987 | 0.827955 | 1.18E-54 | -1.69E-46 |
| MS.gene05781 | MS.gene071987 | 0.818579 | 1.82E-52 | -1.69E-46 |
| MS.gene058084 | MS.gene071987 | 0.80726 | 5.51E-50 | -1.69E-46 |
| MS.gene058238 | MS.gene071987 | 0.808554 | 2.93E-50 | -1.69E-46 |
| MS.gene058498 | MS.gene071987 | 0.805694 | 1.18E-49 | -1.69E-46 |
| MS.gene058908 | MS.gene071987 | 0.834518 | 2.86E-56 | -1.69E-46 |
| MS.gene058911 | MS.gene071987 | 0.842583 | 2.37E-58 | -1.69E-46 |
| MS.gene059146 | MS.gene071987 | 0.814885 | 1.23E-51 | -1.69E-46 |
| MS.gene059227 | MS.gene071987 | 0.815847 | 7.49E-52 | -1.69E-46 |
| MS.gene05950 | MS.gene071987 | 0.81898 | 1.48E-52 | -1.69E-46 |
| MS.gene05953 | MS.gene071987 | 0.843366 | 1.46E-58 | -1.69E-46 |
| MS.gene05954 | MS.gene071987 | 0.846819 | 1.71E-59 | -1.69E-46 |
| MS.gene059830 | MS.gene071987 | 0.828704 | 7.75E-55 | -1.69E-46 |
| MS.gene05985 | MS.gene071987 | -0.813883 | 2.04E-51 | -1.69E-46 |
| MS.gene059901 | MS.gene071987 | -0.821518 | 3.87E-53 | -1.69E-46 |
| MS.gene059935 | MS.gene071987 | 0.886956 | 2.18E-72 | -1.69E-46 |
| MS.gene06001 | MS.gene071987 | 0.889999 | 1.46E-73 | -1.69E-46 |
| MS.gene06011 | MS.gene071987 | 0.866714 | 2.33E-65 | -1.69E-46 |
| MS.gene060365 | MS.gene071987 | 0.841965 | 3.45E-58 | -1.69E-46 |
| MS.gene060429 | MS.gene071987 | 0.876365 | 1.48E-68 | -1.69E-46 |
| MS.gene060586 | MS.gene071987 | 0.850172 | 2.02E-60 | -1.69E-46 |
| MS.gene060763 | MS.gene071987 | 0.863906 | 1.78E-64 | -1.69E-46 |
| MS.gene060830 | MS.gene071987 | 0.901502 | 2.51E-78 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071987.t1 | MTR_2g007780 | 98.895 | 181 | 2 | 0 | 1 | 181 | 48 | 228 | 2.03e-131 | 367 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071987.t1 | AT1G25260 | 70.175 | 171 | 50 | 1 | 1 | 171 | 48 | 217 | 2.47e-84 | 248 |
Find 37 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCGAAATTGAAAGAGTTT+AGG | 0.242754 | 2.4:+75150837 | MS.gene071987:CDS |
| CTTTGAAACTTTGTGAAGAT+TGG | 0.248050 | 2.4:-75150951 | None:intergenic |
| TTCGAAATTGAAAGAGTTTA+GGG | 0.248422 | 2.4:+75150838 | MS.gene071987:CDS |
| AGAGCAGTTCACACATGATA+TGG | 0.322264 | 2.4:+75152349 | MS.gene071987:CDS |
| GACTGAACCTGGTTTGTAGA+TGG | 0.358071 | 2.4:+75153346 | MS.gene071987:CDS |
| TTTGAAACTTTGTGAAGATT+GGG | 0.382034 | 2.4:-75150950 | None:intergenic |
| ACCTGAAGCATCTCGTATAC+TGG | 0.389289 | 2.4:+75152560 | MS.gene071987:CDS |
| GAACAGGCATGCCTTGCTTC+CGG | 0.401326 | 2.4:-75152382 | None:intergenic |
| AAAGTAATGCAAGTTGCTAT+TGG | 0.403753 | 2.4:+75150902 | MS.gene071987:CDS |
| CAGCTATTGCGTGGAGATGC+TGG | 0.406333 | 2.4:+75151570 | MS.gene071987:intron |
| GTACCTTTATTTAACCGAAC+AGG | 0.425105 | 2.4:-75152398 | None:intergenic |
| ATGCCTGTTCGGTTAAATAA+AGG | 0.445190 | 2.4:+75152395 | MS.gene071987:CDS |
| ACTGAACCTGGTTTGTAGAT+GGG | 0.448280 | 2.4:+75153347 | MS.gene071987:CDS |
| TAGGCTGTTTAATGAATTTG+AGG | 0.448398 | 2.4:+75151939 | MS.gene071987:intron |
| ACCAGTATACGAGATGCTTC+AGG | 0.450575 | 2.4:-75152561 | None:intergenic |
| TCCAAAATTCACAGGTGTTG+TGG | 0.453240 | 2.4:+75152491 | MS.gene071987:intron |
| GGAAGCAAGGCATGCCTGTT+CGG | 0.453618 | 2.4:+75152384 | MS.gene071987:CDS |
| TCATGTGTGAACTGCTCTAA+AGG | 0.461609 | 2.4:-75152344 | None:intergenic |
| ATGCCTTGCTTCCGGAGAAA+AGG | 0.467064 | 2.4:-75152374 | None:intergenic |
| GGATGCGACTTTGCAAGAAC+AGG | 0.475150 | 2.4:+75151961 | MS.gene071987:CDS |
| CAATCTTCACAAAGTTTCAA+AGG | 0.483461 | 2.4:+75150952 | MS.gene071987:CDS |
| GACTTTGTTGTTTGTGAGGA+GGG | 0.491569 | 2.4:+75152525 | MS.gene071987:CDS |
| GGCTACGTTTCGACTGAACC+TGG | 0.495680 | 2.4:+75153335 | MS.gene071987:CDS |
| GAACTCTACATTGATGGGCC+TGG | 0.523108 | 2.4:+75153387 | MS.gene071987:CDS |
| AGGCTGTTTAATGAATTTGA+GGG | 0.523767 | 2.4:+75151940 | MS.gene071987:intron |
| CTGAACCTGGTTTGTAGATG+GGG | 0.535144 | 2.4:+75153348 | MS.gene071987:CDS |
| CATTCAACATCTGAATCGCC+AGG | 0.535824 | 2.4:-75153405 | None:intergenic |
| ACTGTTTCAGGTTGAACTCA+AGG | 0.537015 | 2.4:+75152316 | MS.gene071987:intron |
| GCGTTTGATGGGAAATATGA+TGG | 0.540790 | 2.4:+75153314 | MS.gene071987:intron |
| TTCTGACTTTGTTGTTTGTG+AGG | 0.545701 | 2.4:+75152521 | MS.gene071987:CDS |
| TGACTTTGTTGTTTGTGAGG+AGG | 0.559551 | 2.4:+75152524 | MS.gene071987:CDS |
| TGTCTAAAGAAGAAGTTGAA+AGG | 0.565730 | 2.4:+75151610 | MS.gene071987:CDS |
| CAGAACCCCATCTACAAACC+AGG | 0.589817 | 2.4:-75153353 | None:intergenic |
| CGAGATGCTTCAGGTGACAA+AGG | 0.595978 | 2.4:-75152552 | None:intergenic |
| GGTTTGTAGATGGGGTTCTG+AGG | 0.610326 | 2.4:+75153356 | MS.gene071987:CDS |
| TTTCAGGTTGAACTCAAGGA+GGG | 0.645581 | 2.4:+75152320 | MS.gene071987:intron |
| GTTTCAGGTTGAACTCAAGG+AGG | 0.696156 | 2.4:+75152319 | MS.gene071987:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAATCAAACCAAA+CGG | - | chr2.4:75151179-75151198 | None:intergenic | 15.0% |
| !! | AACTAAAAAGTAATTAATGA+TGG | - | chr2.4:75153001-75153020 | None:intergenic | 15.0% |
| !! | ACATAAAAATGAAAGATATA+GGG | - | chr2.4:75152857-75152876 | None:intergenic | 15.0% |
| !! | ATATTCATAAAAAATGTAAG+AGG | - | chr2.4:75151522-75151541 | None:intergenic | 15.0% |
| !! | TACATAAAAATGAAAGATAT+AGG | - | chr2.4:75152858-75152877 | None:intergenic | 15.0% |
| !!! | TCATTTTCTTAAATTATTAC+CGG | - | chr2.4:75152120-75152139 | None:intergenic | 15.0% |
| !!! | TTTGTTTTATTTTTTTGTTG+TGG | + | chr2.4:75151004-75151023 | MS.gene071987:intron | 15.0% |
| !!! | TTTTTATTGATGCTATTTAT+AGG | + | chr2.4:75151920-75151939 | MS.gene071987:intron | 15.0% |
| !! | AAAAAGTAATTAATGATGGT+GGG | - | chr2.4:75152997-75153016 | None:intergenic | 20.0% |
| !! | AAATAGCATCAATAAAAATC+AGG | - | chr2.4:75151918-75151937 | None:intergenic | 20.0% |
| !! | AAGAAAATGACATAATTGAA+TGG | + | chr2.4:75152130-75152149 | MS.gene071987:intron | 20.0% |
| !! | ATTAATTACTTCAATAACCA+AGG | - | chr2.4:75153186-75153205 | None:intergenic | 20.0% |
| !! | CAAATTTAATGTACGATTAT+TGG | + | chr2.4:75151677-75151696 | MS.gene071987:intron | 20.0% |
| !! | GAAATTAGTAACACTAAATA+TGG | - | chr2.4:75152754-75152773 | None:intergenic | 20.0% |
| !! | TAAAAAGTAATTAATGATGG+TGG | - | chr2.4:75152998-75153017 | None:intergenic | 20.0% |
| !! | TGATGTACATACTATAATAA+TGG | - | chr2.4:75153253-75153272 | None:intergenic | 20.0% |
| !! | TTACTATTGAGAATTTAACA+AGG | - | chr2.4:75153143-75153162 | None:intergenic | 20.0% |
| !!! | AATTTTGCTTGAATAAACAT+TGG | + | chr2.4:75151813-75151832 | MS.gene071987:intron | 20.0% |
| !!! | ATGCAAATAAATAAGCTTTT+AGG | + | chr2.4:75151224-75151243 | MS.gene071987:intron | 20.0% |
| !!! | ATGTGATTTTGATTAGTTTT+TGG | + | chr2.4:75151036-75151055 | MS.gene071987:intron | 20.0% |
| !!! | TATTTAGTGTTACTAATTTC+AGG | + | chr2.4:75152754-75152773 | MS.gene071987:intron | 20.0% |
| !!! | TTGAAGTAATTAATTAGTCT+CGG | + | chr2.4:75153192-75153211 | MS.gene071987:intron | 20.0% |
| !!! | TTTTTGAAAATCTGTAACAA+AGG | + | chr2.4:75151424-75151443 | MS.gene071987:intron | 20.0% |
| ! | AGCTAAAATTGTATCTTCAT+CGG | + | chr2.4:75151267-75151286 | MS.gene071987:intron | 25.0% |
| ! | ATTATAGGTTTCTACTAACA+AGG | - | chr2.4:75152057-75152076 | None:intergenic | 25.0% |
| ! | ATTCGAAATTGAAAGAGTTT+AGG | + | chr2.4:75150837-75150856 | MS.gene071987:CDS | 25.0% |
| ! | CAAACAAGAAAAAATCAATG+GGG | - | chr2.4:75152906-75152925 | None:intergenic | 25.0% |
| ! | CCAAACAAGAAAAAATCAAT+GGG | - | chr2.4:75152907-75152926 | None:intergenic | 25.0% |
| ! | GAAATGGAGAGAATAATAAA+TGG | + | chr2.4:75153060-75153079 | MS.gene071987:intron | 25.0% |
| ! | TAAAAATGAAAGATATAGGG+AGG | - | chr2.4:75152854-75152873 | None:intergenic | 25.0% |
| ! | TATAGTAGCTGATATTCAAT+TGG | + | chr2.4:75151745-75151764 | MS.gene071987:intron | 25.0% |
| ! | TATTATTGATAAGCTTGTCA+AGG | - | chr2.4:75151312-75151331 | None:intergenic | 25.0% |
| ! | TTCGAAATTGAAAGAGTTTA+GGG | + | chr2.4:75150838-75150857 | MS.gene071987:CDS | 25.0% |
| !! | ACTCATTCAATTAAAAGTGT+TGG | + | chr2.4:75152188-75152207 | MS.gene071987:intron | 25.0% |
| !! | ATTTTGAACTCTACATTGAT+GGG | + | chr2.4:75153382-75153401 | MS.gene071987:CDS | 25.0% |
| !! | CTGATATTCAATTGGTAATT+TGG | + | chr2.4:75151753-75151772 | MS.gene071987:intron | 25.0% |
| !! | TATAATAATGGTGCTAATTG+AGG | - | chr2.4:75153241-75153260 | None:intergenic | 25.0% |
| !! | TTTGAAACTTTGTGAAGATT+GGG | - | chr2.4:75150953-75150972 | None:intergenic | 25.0% |
| !!! | ATCGTTAACCTTTTTCAATA+GGG | + | chr2.4:75151836-75151855 | MS.gene071987:intron | 25.0% |
| !!! | CCATTGATTTTTTCTTGTTT+GGG | + | chr2.4:75152905-75152924 | MS.gene071987:intron | 25.0% |
| !!! | GTCAATTATTAGTCTTCAAT+TGG | - | chr2.4:75152468-75152487 | None:intergenic | 25.0% |
| !!! | TTGGAGATTTTTAAGAAAAG+CGG | + | chr2.4:75151055-75151074 | MS.gene071987:intron | 25.0% |
| AAAGTAATGCAAGTTGCTAT+TGG | + | chr2.4:75150902-75150921 | MS.gene071987:CDS | 30.0% | |
| ACAAAATAAGCCAATCCAAA+CGG | + | chr2.4:75151361-75151380 | MS.gene071987:intron | 30.0% | |
| ACATCATCAACGTTATAATG+TGG | + | chr2.4:75153267-75153286 | MS.gene071987:intron | 30.0% | |
| AGGCTGTTTAATGAATTTGA+GGG | + | chr2.4:75151940-75151959 | MS.gene071987:intron | 30.0% | |
| CAATCTTCACAAAGTTTCAA+AGG | + | chr2.4:75150952-75150971 | MS.gene071987:CDS | 30.0% | |
| CATCAATAAAAATCAGGTTC+TGG | - | chr2.4:75151912-75151931 | None:intergenic | 30.0% | |
| CCCAAACAAGAAAAAATCAA+TGG | - | chr2.4:75152908-75152927 | None:intergenic | 30.0% | |
| GATATGCTAAACATGTTTCT+GGG | + | chr2.4:75151785-75151804 | MS.gene071987:intron | 30.0% | |
| GGATAATGTGAACAATCAAA+TGG | - | chr2.4:75152885-75152904 | None:intergenic | 30.0% | |
| TAGGCTGTTTAATGAATTTG+AGG | + | chr2.4:75151939-75151958 | MS.gene071987:intron | 30.0% | |
| TGACACATAAAATAGACAGT+GGG | + | chr2.4:75152953-75152972 | MS.gene071987:intron | 30.0% | |
| TGATATGCTAAACATGTTTC+TGG | + | chr2.4:75151784-75151803 | MS.gene071987:intron | 30.0% | |
| TGTCTAAAGAAGAAGTTGAA+AGG | + | chr2.4:75151610-75151629 | MS.gene071987:CDS | 30.0% | |
| TTGACACATAAAATAGACAG+TGG | + | chr2.4:75152952-75152971 | MS.gene071987:intron | 30.0% | |
| ! | ATATGCTAAACATGTTTCTG+GGG | + | chr2.4:75151786-75151805 | MS.gene071987:intron | 30.0% |
| ! | GATTTTGAACTCTACATTGA+TGG | + | chr2.4:75153381-75153400 | MS.gene071987:CDS | 30.0% |
| !! | ATTATTAGTCTTCAATTGGC+AGG | - | chr2.4:75152464-75152483 | None:intergenic | 30.0% |
| !! | ATTTTCTGAGAAGCTACTAA+TGG | + | chr2.4:75151152-75151171 | MS.gene071987:intron | 30.0% |
| !! | CTTTGAAACTTTGTGAAGAT+TGG | - | chr2.4:75150954-75150973 | None:intergenic | 30.0% |
| !! | CTTTTAATTGAATGAGTGTC+TGG | - | chr2.4:75152185-75152204 | None:intergenic | 30.0% |
| !! | TTTTCTGAGAAGCTACTAAT+GGG | + | chr2.4:75151153-75151172 | MS.gene071987:intron | 30.0% |
| !!! | CATTTGAGAAGTTGTTTTTC+AGG | - | chr2.4:75151388-75151407 | None:intergenic | 30.0% |
| !!! | CCCATTGATTTTTTCTTGTT+TGG | + | chr2.4:75152904-75152923 | MS.gene071987:intron | 30.0% |
| !!! | CTAGATTCAACCTACTTTTT+CGG | - | chr2.4:75151998-75152017 | None:intergenic | 30.0% |
| !!! | GATCGTTAACCTTTTTCAAT+AGG | + | chr2.4:75151835-75151854 | MS.gene071987:intron | 30.0% |
| !!! | TCAAGTAGCAAGTTTTTTCT+TGG | + | chr2.4:75150872-75150891 | MS.gene071987:CDS | 30.0% |
| !!! | TCGTTAACCTTTTTCAATAG+GGG | + | chr2.4:75151837-75151856 | MS.gene071987:intron | 30.0% |
| !!! | TGATTTTTTCTTGTTTGGGT+GGG | + | chr2.4:75152909-75152928 | MS.gene071987:intron | 30.0% |
| !!! | TTGATTTTTTCTTGTTTGGG+TGG | + | chr2.4:75152908-75152927 | MS.gene071987:intron | 30.0% |
| AATAACCAAGGTCAAGATGT+TGG | - | chr2.4:75153174-75153193 | None:intergenic | 35.0% | |
| AATAACTACTTCCTGCCTAT+GGG | + | chr2.4:75152720-75152739 | MS.gene071987:intron | 35.0% | |
| AATATGGTCGAATAACCCAT+AGG | - | chr2.4:75152738-75152757 | None:intergenic | 35.0% | |
| ATAGGCAGGAAGTAGTTATT+AGG | - | chr2.4:75152720-75152739 | None:intergenic | 35.0% | |
| ATCTCTCCAAATGGATGAAA+TGG | + | chr2.4:75153044-75153063 | MS.gene071987:intron | 35.0% | |
| ATGCCTGTTCGGTTAAATAA+AGG | + | chr2.4:75152395-75152414 | MS.gene071987:CDS | 35.0% | |
| CAAAATAAGCCAATCCAAAC+GGG | + | chr2.4:75151362-75151381 | MS.gene071987:intron | 35.0% | |
| CCAATAGAACTTGCAATATC+AGG | + | chr2.4:75152646-75152665 | MS.gene071987:intron | 35.0% | |
| CCTGATATTGCAAGTTCTAT+TGG | - | chr2.4:75152649-75152668 | None:intergenic | 35.0% | |
| GGAGAGAATAATAAATGGAG+AGG | + | chr2.4:75153065-75153084 | MS.gene071987:intron | 35.0% | |
| TAATAACTACTTCCTGCCTA+TGG | + | chr2.4:75152719-75152738 | MS.gene071987:intron | 35.0% | |
| TGTGTCTATATCTCTCCAAA+TGG | + | chr2.4:75153035-75153054 | MS.gene071987:intron | 35.0% | |
| TTCTCTCCATTTCATCCATT+TGG | - | chr2.4:75153053-75153072 | None:intergenic | 35.0% | |
| TTGAATGGAATCACACATGT+CGG | + | chr2.4:75152145-75152164 | MS.gene071987:intron | 35.0% | |
| TTGACGTTTCCAAAATTCAC+AGG | + | chr2.4:75152483-75152502 | MS.gene071987:intron | 35.0% | |
| TTTCAAGATCTGACTGTTTC+AGG | + | chr2.4:75152304-75152323 | MS.gene071987:intron | 35.0% | |
| ! | ATGATATGGAACCTTTTCTC+CGG | + | chr2.4:75152363-75152382 | MS.gene071987:CDS | 35.0% |
| ! | GTACCTTTATTTAACCGAAC+AGG | - | chr2.4:75152401-75152420 | None:intergenic | 35.0% |
| !! | TAAAAGTGTTGGTGCTACAA+AGG | + | chr2.4:75152199-75152218 | MS.gene071987:intron | 35.0% |
| !! | TTCTGACTTTGTTGTTTGTG+AGG | + | chr2.4:75152521-75152540 | MS.gene071987:CDS | 35.0% |
| !!! | CGTTAACCTTTTTCAATAGG+GGG | + | chr2.4:75151838-75151857 | MS.gene071987:intron | 35.0% |
| !!! | GTTAACCTTTTTCAATAGGG+GGG | + | chr2.4:75151839-75151858 | MS.gene071987:intron | 35.0% |
| AAGATAGAACGAAGTGGAGT+AGG | + | chr2.4:75152780-75152799 | MS.gene071987:intron | 40.0% | |
| ACTCCACTTCGTTCTATCTT+TGG | - | chr2.4:75152780-75152799 | None:intergenic | 40.0% | |
| AGAGCAGTTCACACATGATA+TGG | + | chr2.4:75152349-75152368 | MS.gene071987:CDS | 40.0% | |
| AGTGGGTCCTACTATTATGT+GGG | + | chr2.4:75152970-75152989 | MS.gene071987:intron | 40.0% | |
| AGTTGAAGTTGCACTACTCT+AGG | + | chr2.4:75152677-75152696 | MS.gene071987:intron | 40.0% | |
| GAAAACCCCCCTATTGAAAA+AGG | - | chr2.4:75151847-75151866 | None:intergenic | 40.0% | |
| GCGTTTGATGGGAAATATGA+TGG | + | chr2.4:75153314-75153333 | MS.gene071987:intron | 40.0% | |
| GTTGAAGTTGCACTACTCTA+GGG | + | chr2.4:75152678-75152697 | MS.gene071987:intron | 40.0% | |
| TCATGTGTGAACTGCTCTAA+AGG | - | chr2.4:75152347-75152366 | None:intergenic | 40.0% | |
| TCTATCCAACATCTTGACCT+TGG | + | chr2.4:75153166-75153185 | MS.gene071987:intron | 40.0% | |
| TGTCTGTGTAGGTGCATTAT+AGG | - | chr2.4:75152072-75152091 | None:intergenic | 40.0% | |
| ! | ACTGAACCTGGTTTGTAGAT+GGG | + | chr2.4:75153347-75153366 | MS.gene071987:CDS | 40.0% |
| ! | TCCAAAATTCACAGGTGTTG+TGG | + | chr2.4:75152491-75152510 | MS.gene071987:intron | 40.0% |
| ! | TCCACAACACCTGTGAATTT+TGG | - | chr2.4:75152495-75152514 | None:intergenic | 40.0% |
| ! | TGCTTTTGACAGCGTTTGAT+GGG | + | chr2.4:75153303-75153322 | MS.gene071987:intron | 40.0% |
| !! | ACTGTTTCAGGTTGAACTCA+AGG | + | chr2.4:75152316-75152335 | MS.gene071987:intron | 40.0% |
| !! | GACTTTGTTGTTTGTGAGGA+GGG | + | chr2.4:75152525-75152544 | MS.gene071987:CDS | 40.0% |
| !! | GTTTTGTTACAGCTATTGCG+TGG | + | chr2.4:75151561-75151580 | MS.gene071987:intron | 40.0% |
| !! | TCGACATGTCAGTGTTGTTT+CGG | - | chr2.4:75152095-75152114 | None:intergenic | 40.0% |
| !! | TGACTTTGTTGTTTGTGAGG+AGG | + | chr2.4:75152524-75152543 | MS.gene071987:CDS | 40.0% |
| !! | TTTCAGGTTGAACTCAAGGA+GGG | + | chr2.4:75152320-75152339 | MS.gene071987:intron | 40.0% |
| !!! | GATTCAACCTACTTTTTCGG+TGG | - | chr2.4:75151995-75152014 | None:intergenic | 40.0% |
| ACCAGTATACGAGATGCTTC+AGG | - | chr2.4:75152564-75152583 | None:intergenic | 45.0% | |
| AGCATTGCCACCGAAAAAGT+AGG | + | chr2.4:75151985-75152004 | MS.gene071987:intron | 45.0% | |
| AGGCCAAAGATAGAACGAAG+TGG | + | chr2.4:75152774-75152793 | MS.gene071987:intron | 45.0% | |
| ATAGCACAGAGCAGAGGATT+TGG | - | chr2.4:75152603-75152622 | None:intergenic | 45.0% | |
| ATGGAGAGGATCTTAACTCG+TGG | + | chr2.4:75153079-75153098 | MS.gene071987:intron | 45.0% | |
| CAGTGGGTCCTACTATTATG+TGG | + | chr2.4:75152969-75152988 | MS.gene071987:intron | 45.0% | |
| CATTCAACATCTGAATCGCC+AGG | - | chr2.4:75153408-75153427 | None:intergenic | 45.0% | |
| GAGCAACTACAGGATATGTC+AGG | - | chr2.4:75152240-75152259 | None:intergenic | 45.0% | |
| TAGCACAGAGCAGAGGATTT+GGG | - | chr2.4:75152602-75152621 | None:intergenic | 45.0% | |
| TGGAGAGGATCTTAACTCGT+GGG | + | chr2.4:75153080-75153099 | MS.gene071987:intron | 45.0% | |
| TTTGGGTGGGTAGTGCAATT+TGG | + | chr2.4:75152922-75152941 | MS.gene071987:intron | 45.0% | |
| ! | ACCTGAAGCATCTCGTATAC+TGG | + | chr2.4:75152560-75152579 | MS.gene071987:CDS | 45.0% |
| ! | CTGAACCTGGTTTGTAGATG+GGG | + | chr2.4:75153348-75153367 | MS.gene071987:CDS | 45.0% |
| ! | GACTGAACCTGGTTTGTAGA+TGG | + | chr2.4:75153346-75153365 | MS.gene071987:CDS | 45.0% |
| ! | TGTGCTGGCGAACATAAATG+TGG | + | chr2.4:75152622-75152641 | MS.gene071987:intron | 45.0% |
| !! | CTGCTTTTGACAGCGTTTGA+TGG | + | chr2.4:75153302-75153321 | MS.gene071987:intron | 45.0% |
| !! | GTTTCAGGTTGAACTCAAGG+AGG | + | chr2.4:75152319-75152338 | MS.gene071987:intron | 45.0% |
| !! | TGTTGTTTCGGTGTCTGTGT+AGG | - | chr2.4:75152083-75152102 | None:intergenic | 45.0% |
| !!! | AGTTGTTTTTCAGGCCCGTT+TGG | - | chr2.4:75151379-75151398 | None:intergenic | 45.0% |
| !!! | TTTTTCAGGCCCGTTTGGAT+TGG | - | chr2.4:75151374-75151393 | None:intergenic | 45.0% |
| ATGCCTTGCTTCCGGAGAAA+AGG | - | chr2.4:75152377-75152396 | None:intergenic | 50.0% | |
| CAACACTGACATGTCGACAC+CGG | + | chr2.4:75152098-75152117 | MS.gene071987:intron | 50.0% | |
| CAGAACCCCATCTACAAACC+AGG | - | chr2.4:75153356-75153375 | None:intergenic | 50.0% | |
| CCAGATGCATGAGCAACTAC+AGG | - | chr2.4:75152250-75152269 | None:intergenic | 50.0% | |
| CCTGTAGTTGCTCATGCATC+TGG | + | chr2.4:75152247-75152266 | MS.gene071987:intron | 50.0% | |
| CGAGATGCTTCAGGTGACAA+AGG | - | chr2.4:75152555-75152574 | None:intergenic | 50.0% | |
| GAGAGGATCTTAACTCGTGG+GGG | + | chr2.4:75153082-75153101 | MS.gene071987:intron | 50.0% | |
| GGAGAGGATCTTAACTCGTG+GGG | + | chr2.4:75153081-75153100 | MS.gene071987:intron | 50.0% | |
| GGATGCGACTTTGCAAGAAC+AGG | + | chr2.4:75151961-75151980 | MS.gene071987:CDS | 50.0% | |
| GGTGGGACCCACATAATAGT+AGG | - | chr2.4:75152980-75152999 | None:intergenic | 50.0% | |
| GGTTTGTAGATGGGGTTCTG+AGG | + | chr2.4:75153356-75153375 | MS.gene071987:CDS | 50.0% | |
| TGGTCGAATAACCCATAGGC+AGG | - | chr2.4:75152734-75152753 | None:intergenic | 50.0% | |
| ! | GAACCTTTTCTCCGGAAGCA+AGG | + | chr2.4:75152371-75152390 | MS.gene071987:CDS | 50.0% |
| ! | GAACTCTACATTGATGGGCC+TGG | + | chr2.4:75153387-75153406 | MS.gene071987:CDS | 50.0% |
| ! | GAAGCTACTAATGGGCCGTT+TGG | + | chr2.4:75151161-75151180 | MS.gene071987:intron | 50.0% |
| CAGCACATAGCACAGAGCAG+AGG | - | chr2.4:75152609-75152628 | None:intergenic | 55.0% | |
| CAGCTATTGCGTGGAGATGC+TGG | + | chr2.4:75151570-75151589 | MS.gene071987:intron | 55.0% | |
| CTCTGCTCTGTGCTATGTGC+TGG | + | chr2.4:75152607-75152626 | MS.gene071987:intron | 55.0% | |
| GAACAGGCATGCCTTGCTTC+CGG | - | chr2.4:75152385-75152404 | None:intergenic | 55.0% | |
| GGAAGCAAGGCATGCCTGTT+CGG | + | chr2.4:75152384-75152403 | MS.gene071987:CDS | 55.0% | |
| GGCTACGTTTCGACTGAACC+TGG | + | chr2.4:75153335-75153354 | MS.gene071987:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 75150830 | 75153428 | 75150830 | ID=MS.gene071987 |
| chr2.4 | mRNA | 75150830 | 75153428 | 75150830 | ID=MS.gene071987.t1;Parent=MS.gene071987 |
| chr2.4 | exon | 75150830 | 75150973 | 75150830 | ID=MS.gene071987.t1.exon1;Parent=MS.gene071987.t1 |
| chr2.4 | CDS | 75150830 | 75150973 | 75150830 | ID=cds.MS.gene071987.t1;Parent=MS.gene071987.t1 |
| chr2.4 | exon | 75151573 | 75151631 | 75151573 | ID=MS.gene071987.t1.exon2;Parent=MS.gene071987.t1 |
| chr2.4 | CDS | 75151573 | 75151631 | 75151573 | ID=cds.MS.gene071987.t1;Parent=MS.gene071987.t1 |
| chr2.4 | exon | 75151942 | 75152002 | 75151942 | ID=MS.gene071987.t1.exon3;Parent=MS.gene071987.t1 |
| chr2.4 | CDS | 75151942 | 75152002 | 75151942 | ID=cds.MS.gene071987.t1;Parent=MS.gene071987.t1 |
| chr2.4 | exon | 75152326 | 75152416 | 75152326 | ID=MS.gene071987.t1.exon4;Parent=MS.gene071987.t1 |
| chr2.4 | CDS | 75152326 | 75152416 | 75152326 | ID=cds.MS.gene071987.t1;Parent=MS.gene071987.t1 |
| chr2.4 | exon | 75152505 | 75152581 | 75152505 | ID=MS.gene071987.t1.exon5;Parent=MS.gene071987.t1 |
| chr2.4 | CDS | 75152505 | 75152581 | 75152505 | ID=cds.MS.gene071987.t1;Parent=MS.gene071987.t1 |
| chr2.4 | exon | 75153315 | 75153428 | 75153315 | ID=MS.gene071987.t1.exon6;Parent=MS.gene071987.t1 |
| chr2.4 | CDS | 75153315 | 75153428 | 75153315 | ID=cds.MS.gene071987.t1;Parent=MS.gene071987.t1 |
| Gene Sequence |
| Protein sequence |
