Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068240.t1 | ABN09120.1 | 96.7 | 395 | 12 | 1 | 1 | 395 | 1 | 394 | 5.40E-219 | 770 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068240.t1 | Q38932 | 74.9 | 395 | 95 | 2 | 1 | 394 | 1 | 392 | 3.7e-168 | 592.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068240.t1 | A2Q6A0 | 96.7 | 395 | 12 | 1 | 1 | 395 | 1 | 394 | 3.9e-219 | 770.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene068240 | 0.832301 | 1.02E-55 | -1.69E-46 |
| MS.gene049369 | MS.gene068240 | 0.843609 | 1.26E-58 | -1.69E-46 |
| MS.gene049427 | MS.gene068240 | 0.850965 | 1.21E-60 | -1.69E-46 |
| MS.gene049491 | MS.gene068240 | 0.82824 | 1.00E-54 | -1.69E-46 |
| MS.gene049661 | MS.gene068240 | 0.832462 | 9.32E-56 | -1.69E-46 |
| MS.gene049662 | MS.gene068240 | 0.826946 | 2.05E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene068240 | 0.807057 | 6.09E-50 | -1.69E-46 |
| MS.gene049828 | MS.gene068240 | 0.811299 | 7.51E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene068240 | 0.85307 | 3.05E-61 | -1.69E-46 |
| MS.gene050128 | MS.gene068240 | 0.823175 | 1.60E-53 | -1.69E-46 |
| MS.gene050301 | MS.gene068240 | 0.827976 | 1.16E-54 | -1.69E-46 |
| MS.gene050432 | MS.gene068240 | 0.891574 | 3.51E-74 | -1.69E-46 |
| MS.gene050529 | MS.gene068240 | 0.804681 | 1.92E-49 | -1.69E-46 |
| MS.gene050767 | MS.gene068240 | 0.847072 | 1.46E-59 | -1.69E-46 |
| MS.gene050770 | MS.gene068240 | 0.849437 | 3.24E-60 | -1.69E-46 |
| MS.gene050812 | MS.gene068240 | 0.813193 | 2.90E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene068240 | 0.818523 | 1.87E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene068240 | 0.835399 | 1.72E-56 | -1.69E-46 |
| MS.gene051228 | MS.gene068240 | 0.855681 | 5.36E-62 | -1.69E-46 |
| MS.gene051471 | MS.gene068240 | 0.820608 | 6.27E-53 | -1.69E-46 |
| MS.gene051617 | MS.gene068240 | 0.815339 | 9.73E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene068240 | 0.817845 | 2.67E-52 | -1.69E-46 |
| MS.gene051692 | MS.gene068240 | 0.808576 | 2.89E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene068240 | 0.804618 | 1.98E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene068240 | 0.835837 | 1.33E-56 | -1.69E-46 |
| MS.gene052188 | MS.gene068240 | 0.840507 | 8.34E-58 | -1.69E-46 |
| MS.gene052271 | MS.gene068240 | 0.803318 | 3.69E-49 | -1.69E-46 |
| MS.gene052290 | MS.gene068240 | 0.855011 | 8.40E-62 | -1.69E-46 |
| MS.gene052310 | MS.gene068240 | 0.836471 | 9.18E-57 | -1.69E-46 |
| MS.gene052326 | MS.gene068240 | 0.823169 | 1.60E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene068240 | 0.850149 | 2.05E-60 | -1.69E-46 |
| MS.gene052379 | MS.gene068240 | 0.824227 | 9.05E-54 | -1.69E-46 |
| MS.gene052481 | MS.gene068240 | 0.80566 | 1.20E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene068240 | 0.832011 | 1.21E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene068240 | 0.842437 | 2.59E-58 | -1.69E-46 |
| MS.gene053009 | MS.gene068240 | 0.809546 | 1.79E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene068240 | 0.838634 | 2.56E-57 | -1.69E-46 |
| MS.gene053104 | MS.gene068240 | 0.843416 | 1.42E-58 | -1.69E-46 |
| MS.gene053207 | MS.gene068240 | 0.807188 | 5.71E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene068240 | 0.863845 | 1.86E-64 | -1.69E-46 |
| MS.gene053322 | MS.gene068240 | 0.828084 | 1.09E-54 | -1.69E-46 |
| MS.gene053384 | MS.gene068240 | 0.803678 | 3.11E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene068240 | 0.806545 | 7.81E-50 | -1.69E-46 |
| MS.gene053557 | MS.gene068240 | 0.8337 | 4.59E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene068240 | 0.801689 | 8.00E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene068240 | 0.847874 | 8.77E-60 | -1.69E-46 |
| MS.gene054376 | MS.gene068240 | 0.839462 | 1.56E-57 | -1.69E-46 |
| MS.gene054802 | MS.gene068240 | 0.813459 | 2.53E-51 | -1.69E-46 |
| MS.gene054803 | MS.gene068240 | 0.813853 | 2.07E-51 | -1.69E-46 |
| MS.gene054804 | MS.gene068240 | 0.817231 | 3.67E-52 | -1.69E-46 |
| MS.gene054955 | MS.gene068240 | 0.807064 | 6.07E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene068240 | 0.805378 | 1.37E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene068240 | 0.825824 | 3.80E-54 | -1.69E-46 |
| MS.gene055212 | MS.gene068240 | 0.802764 | 4.81E-49 | -1.69E-46 |
| MS.gene055254 | MS.gene068240 | 0.854832 | 9.46E-62 | -1.69E-46 |
| MS.gene055277 | MS.gene068240 | 0.846701 | 1.84E-59 | -1.69E-46 |
| MS.gene055390 | MS.gene068240 | 0.825024 | 5.87E-54 | -1.69E-46 |
| MS.gene055397 | MS.gene068240 | 0.863009 | 3.38E-64 | -1.69E-46 |
| MS.gene055412 | MS.gene068240 | 0.833065 | 6.61E-56 | -1.69E-46 |
| MS.gene055422 | MS.gene068240 | 0.812522 | 4.06E-51 | -1.69E-46 |
| MS.gene055499 | MS.gene068240 | 0.832246 | 1.05E-55 | -1.69E-46 |
| MS.gene055896 | MS.gene068240 | 0.837654 | 4.58E-57 | -1.69E-46 |
| MS.gene05592 | MS.gene068240 | 0.835092 | 2.05E-56 | -1.69E-46 |
| MS.gene056407 | MS.gene068240 | 0.830595 | 2.69E-55 | -1.69E-46 |
| MS.gene056410 | MS.gene068240 | 0.82066 | 6.10E-53 | -1.69E-46 |
| MS.gene056609 | MS.gene068240 | 0.886436 | 3.43E-72 | -1.69E-46 |
| MS.gene056612 | MS.gene068240 | 0.804105 | 2.53E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene068240 | 0.834715 | 2.55E-56 | -1.69E-46 |
| MS.gene056796 | MS.gene068240 | 0.810389 | 1.18E-50 | -1.69E-46 |
| MS.gene056897 | MS.gene068240 | 0.840608 | 7.85E-58 | -1.69E-46 |
| MS.gene057011 | MS.gene068240 | 0.812975 | 3.23E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene068240 | 0.827649 | 1.39E-54 | -1.69E-46 |
| MS.gene057124 | MS.gene068240 | 0.808463 | 3.06E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene068240 | 0.861026 | 1.37E-63 | -1.69E-46 |
| MS.gene057246 | MS.gene068240 | 0.810179 | 1.31E-50 | -1.69E-46 |
| MS.gene057295 | MS.gene068240 | 0.820145 | 8.01E-53 | -1.69E-46 |
| MS.gene057331 | MS.gene068240 | 0.803308 | 3.71E-49 | -1.69E-46 |
| MS.gene05735 | MS.gene068240 | 0.850101 | 2.11E-60 | -1.69E-46 |
| MS.gene057448 | MS.gene068240 | 0.826229 | 3.04E-54 | -1.69E-46 |
| MS.gene057449 | MS.gene068240 | 0.822043 | 2.93E-53 | -1.69E-46 |
| MS.gene057450 | MS.gene068240 | 0.832852 | 7.46E-56 | -1.69E-46 |
| MS.gene057537 | MS.gene068240 | 0.826878 | 2.13E-54 | -1.69E-46 |
| MS.gene057926 | MS.gene068240 | 0.803496 | 3.39E-49 | -1.69E-46 |
| MS.gene057927 | MS.gene068240 | 0.841758 | 3.91E-58 | -1.69E-46 |
| MS.gene058002 | MS.gene068240 | 0.826588 | 2.50E-54 | -1.69E-46 |
| MS.gene058006 | MS.gene068240 | 0.811183 | 7.95E-51 | -1.69E-46 |
| MS.gene058082 | MS.gene068240 | 0.870849 | 1.07E-66 | -1.69E-46 |
| MS.gene058293 | MS.gene068240 | 0.857106 | 2.05E-62 | -1.69E-46 |
| MS.gene058365 | MS.gene068240 | 0.85178 | 7.10E-61 | -1.69E-46 |
| MS.gene058660 | MS.gene068240 | 0.855143 | 7.69E-62 | -1.69E-46 |
| MS.gene058723 | MS.gene068240 | 0.804012 | 2.65E-49 | -1.69E-46 |
| MS.gene058748 | MS.gene068240 | 0.819735 | 9.94E-53 | -1.69E-46 |
| MS.gene058787 | MS.gene068240 | 0.830712 | 2.52E-55 | -1.69E-46 |
| MS.gene058928 | MS.gene068240 | 0.827704 | 1.35E-54 | -1.69E-46 |
| MS.gene058948 | MS.gene068240 | 0.802793 | 4.74E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene068240 | 0.805565 | 1.26E-49 | -1.69E-46 |
| MS.gene059342 | MS.gene068240 | 0.805357 | 1.39E-49 | -1.69E-46 |
| MS.gene059366 | MS.gene068240 | 0.821476 | 3.96E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene068240 | 0.811438 | 7.00E-51 | -1.69E-46 |
| MS.gene059597 | MS.gene068240 | 0.836672 | 8.16E-57 | -1.69E-46 |
| MS.gene05959 | MS.gene068240 | 0.820088 | 8.25E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene068240 | 0.847674 | 9.96E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene068240 | 0.854829 | 9.48E-62 | -1.69E-46 |
| MS.gene059692 | MS.gene068240 | 0.866237 | 3.30E-65 | -1.69E-46 |
| MS.gene059695 | MS.gene068240 | 0.863245 | 2.86E-64 | -1.69E-46 |
| MS.gene059708 | MS.gene068240 | 0.882195 | 1.28E-70 | -1.69E-46 |
| MS.gene059711 | MS.gene068240 | 0.822592 | 2.18E-53 | -1.69E-46 |
| MS.gene059858 | MS.gene068240 | 0.805589 | 1.24E-49 | -1.69E-46 |
| MS.gene05986 | MS.gene068240 | 0.824375 | 8.35E-54 | -1.69E-46 |
| MS.gene059894 | MS.gene068240 | 0.849701 | 2.73E-60 | -1.69E-46 |
| MS.gene059960 | MS.gene068240 | 0.86303 | 3.33E-64 | -1.69E-46 |
| MS.gene059974 | MS.gene068240 | 0.804974 | 1.67E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene068240 | 0.814884 | 1.23E-51 | -1.69E-46 |
| MS.gene060407 | MS.gene068240 | 0.821515 | 3.88E-53 | -1.69E-46 |
| MS.gene060569 | MS.gene068240 | 0.814709 | 1.34E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene068240 | 0.859189 | 4.91E-63 | -1.69E-46 |
| MS.gene060818 | MS.gene068240 | 0.841096 | 5.84E-58 | -1.69E-46 |
| MS.gene060837 | MS.gene068240 | 0.802357 | 5.83E-49 | -1.69E-46 |
| MS.gene06090 | MS.gene068240 | 0.804661 | 1.94E-49 | -1.69E-46 |
| MS.gene061041 | MS.gene068240 | 0.86942 | 3.14E-66 | -1.69E-46 |
| MS.gene061049 | MS.gene068240 | 0.832792 | 7.72E-56 | -1.69E-46 |
| MS.gene061051 | MS.gene068240 | -0.886396 | 3.55E-72 | -1.69E-46 |
| MS.gene061200 | MS.gene068240 | 0.849832 | 2.51E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068240.t1 | MTR_2g040060 | 96.193 | 394 | 14 | 1 | 1 | 394 | 1 | 393 | 0.0 | 789 |
| MS.gene068240.t1 | MTR_2g086700 | 39.796 | 294 | 157 | 6 | 111 | 391 | 81 | 367 | 2.47e-60 | 203 |
| MS.gene068240.t1 | MTR_7g090150 | 39.711 | 277 | 159 | 6 | 120 | 391 | 91 | 364 | 6.02e-60 | 202 |
| MS.gene068240.t1 | MTR_2g086730 | 39.446 | 289 | 165 | 6 | 111 | 395 | 77 | 359 | 1.37e-59 | 201 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068240.t1 | AT5G57030 | 74.430 | 395 | 97 | 2 | 1 | 394 | 1 | 392 | 0.0 | 605 |
| MS.gene068240.t1 | AT3G10230 | 35.866 | 329 | 198 | 6 | 73 | 396 | 50 | 370 | 3.65e-60 | 203 |
| MS.gene068240.t1 | AT3G10230 | 36.017 | 236 | 145 | 4 | 159 | 391 | 1 | 233 | 1.74e-42 | 153 |
Find 89 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCAATTGGACGTTCTTA+TGG | 0.245863 | 2.2:+47571839 | MS.gene068240:CDS |
| GTACTAGATCTAGTCGTTAT+TGG | 0.302963 | 2.2:+47571249 | MS.gene068240:CDS |
| GGATTAAAAGTTGGACTTAT+TGG | 0.306867 | 2.2:+47571318 | MS.gene068240:CDS |
| GTTGCATCAGGAGCAGCTTC+AGG | 0.332490 | 2.2:+47572278 | MS.gene068240:CDS |
| GCAATCTAAGCTTGCGGATA+AGG | 0.338114 | 2.2:+47569278 | MS.gene068240:CDS |
| TAAGGAGAAAGAAGATTTGT+TGG | 0.345414 | 2.2:+47569064 | MS.gene068240:CDS |
| GTGTGTGTGCAAACAGCTTA+TGG | 0.354505 | 2.2:+47572335 | MS.gene068240:CDS |
| CTTGCTCTAGCTGCTGAATC+TGG | 0.361407 | 2.2:+47571288 | MS.gene068240:CDS |
| CCAATCGCAGGAAACGTGTT+TGG | 0.364731 | 2.2:+47572954 | MS.gene068240:intron |
| GTGTGGGAGGACGAATTTAA+AGG | 0.371750 | 2.2:+47571372 | MS.gene068240:CDS |
| CAGTTGCCACCTATCTCTAT+TGG | 0.372211 | 2.2:+47571219 | MS.gene068240:intron |
| AGGTTCTTCTGTTCTGTGTT+TGG | 0.372287 | 2.2:-47573673 | None:intergenic |
| GCTGCTGAATCTGGCAAGTT+AGG | 0.372390 | 2.2:+47571297 | MS.gene068240:CDS |
| AACTATTGCAGTATGAGGTT+GGG | 0.384949 | 2.2:+47572303 | MS.gene068240:CDS |
| GCTGTTTGCACACACACCTT+TGG | 0.395248 | 2.2:-47572329 | None:intergenic |
| TAAGTCCTTCTTTGCGGTTA+AGG | 0.395321 | 2.2:+47569046 | MS.gene068240:CDS |
| CTCCCTTTCACAAACAACTA+TGG | 0.400540 | 2.2:+47571348 | MS.gene068240:CDS |
| TTTGGTAAGGATCCACCAAC+TGG | 0.407219 | 2.2:-47573655 | None:intergenic |
| AAGGTTGTATTGAGCATGTT+TGG | 0.411470 | 2.2:+47571780 | MS.gene068240:CDS |
| ATTTCAGGTCTTGGACTTGA+AGG | 0.411475 | 2.2:+47571761 | MS.gene068240:intron |
| CTTCTGTTCTGTGTTTGGTA+AGG | 0.411856 | 2.2:-47573668 | None:intergenic |
| AGGCTTGTTACTGTTGCATC+AGG | 0.414531 | 2.2:+47572266 | MS.gene068240:intron |
| GAGTCAGGTGTCTCGTATCT+TGG | 0.416251 | 2.2:+47572022 | MS.gene068240:CDS |
| TTCCCTAGGTGTGTCGAGTC+AGG | 0.420699 | 2.2:+47572007 | MS.gene068240:intron |
| TCCATGAAAACCATCACGTT+TGG | 0.421212 | 2.2:-47572758 | None:intergenic |
| ACCATCACGTTTGGATCATA+AGG | 0.427701 | 2.2:-47572749 | None:intergenic |
| GATCTAGTCGTTATTGGTTG+TGG | 0.430410 | 2.2:+47571255 | MS.gene068240:CDS |
| TTTGCATAAGTCCTTCTTTG+CGG | 0.434401 | 2.2:+47569040 | MS.gene068240:CDS |
| AAACTATTGCAGTATGAGGT+TGG | 0.434728 | 2.2:+47572302 | MS.gene068240:CDS |
| TAAGAACGTCCAATTGAAAT+CGG | 0.444751 | 2.2:-47571836 | None:intergenic |
| TGTGGCTGGATGCACCATGC+TGG | 0.447091 | 2.2:-47573713 | None:intergenic |
| GAACAGAAGAACCTTGCATT+TGG | 0.452985 | 2.2:+47573682 | MS.gene068240:CDS |
| ACTCCATCTCCAATAGAGAT+AGG | 0.454988 | 2.2:-47571228 | None:intergenic |
| CTTCGTCGAACGCAACAATT+CGG | 0.458295 | 2.2:+47569100 | MS.gene068240:CDS |
| GGCATTGCATAAAGAAATGT+TGG | 0.467739 | 2.2:-47572830 | None:intergenic |
| CACCATAGTTGTTTGTGAAA+GGG | 0.468395 | 2.2:-47571350 | None:intergenic |
| TTCACGAAGAATTGTTAAGA+AGG | 0.473016 | 2.2:+47571882 | MS.gene068240:CDS |
| TTGCATCAGGAGCAGCTTCA+GGG | 0.474105 | 2.2:+47572279 | MS.gene068240:CDS |
| AGGGAAACTATTGCAGTATG+AGG | 0.481433 | 2.2:+47572298 | MS.gene068240:CDS |
| GTTATTGGTTGTGGTCCTGC+TGG | 0.481480 | 2.2:+47571264 | MS.gene068240:CDS |
| GAGTTGTGTTGTTGCTAAAG+AGG | 0.481683 | 2.2:+47569170 | MS.gene068240:CDS |
| GCAGCTAGAGCAAGACCAGC+AGG | 0.483198 | 2.2:-47571279 | None:intergenic |
| GACAATGTCATGCCTGTGGC+TGG | 0.483589 | 2.2:-47573727 | None:intergenic |
| TGTGTGTGCAAACAGCTTAT+GGG | 0.485667 | 2.2:+47572336 | MS.gene068240:CDS |
| TCATACAAAAGTGTTCTTTG+AGG | 0.486804 | 2.2:+47572859 | MS.gene068240:CDS |
| ACTATTGCAGTATGAGGTTG+GGG | 0.493808 | 2.2:+47572304 | MS.gene068240:CDS |
| AAAAGTTGGACTTATTGGTC+CGG | 0.495439 | 2.2:+47571323 | MS.gene068240:CDS |
| AATGCGAAAGCAGGTGGTGC+AGG | 0.499971 | 2.2:+47569141 | MS.gene068240:CDS |
| TTTCTCCTTAACCGCAAAGA+AGG | 0.501398 | 2.2:-47569051 | None:intergenic |
| AGCATGGTGCATCCAGCCAC+AGG | 0.501582 | 2.2:+47573715 | MS.gene068240:CDS |
| CGTTGGAGCGAGAAACTTAA+CGG | 0.502128 | 2.2:+47569008 | MS.gene068240:CDS |
| GGCAAGTTAGGATTAAAAGT+TGG | 0.508773 | 2.2:+47571309 | MS.gene068240:CDS |
| AGCTTATGGGGTGGAAGTTG+AGG | 0.509754 | 2.2:+47572349 | MS.gene068240:CDS |
| CTTTAATAAATCAAAAGGCA+TGG | 0.510757 | 2.2:-47572989 | None:intergenic |
| TTATCAAGATTAAATACGAT+GGG | 0.511081 | 2.2:+47573021 | MS.gene068240:CDS |
| ATGATACTGTAGTGCCCTGC+AGG | 0.512630 | 2.2:+47572104 | MS.gene068240:CDS |
| TTGTTTGTGAAAGGGAGATC+CGG | 0.515364 | 2.2:-47571342 | None:intergenic |
| TTGTATTGAGCATGTTTGGA+AGG | 0.520513 | 2.2:+47571784 | MS.gene068240:CDS |
| CCACCTATCTCTATTGGAGA+TGG | 0.520907 | 2.2:+47571225 | MS.gene068240:CDS |
| ACACCATAGTTGTTTGTGAA+AGG | 0.521405 | 2.2:-47571351 | None:intergenic |
| ATTTGGTGCAGCTGCCAGCA+TGG | 0.532513 | 2.2:+47573699 | MS.gene068240:CDS |
| ATGAAAGTGAATGCGAAAGC+AGG | 0.541648 | 2.2:+47569132 | MS.gene068240:CDS |
| TTCGTTACAATGGAGTGCGT+TGG | 0.541968 | 2.2:+47568991 | None:intergenic |
| ATCTTGGCTCAAAAGTAGAA+AGG | 0.551209 | 2.2:+47572038 | MS.gene068240:CDS |
| GTTCTTATGGCCGTGTCAGT+CGG | 0.553276 | 2.2:+47571852 | MS.gene068240:CDS |
| TGGTCTTATATCCCAGTTGG+TGG | 0.561768 | 2.2:+47573643 | MS.gene068240:CDS |
| AGCGAGAAACTTAACGGCAA+TGG | 0.580164 | 2.2:+47569014 | MS.gene068240:CDS |
| CACAAACAACTATGGTGTGT+GGG | 0.580409 | 2.2:+47571356 | MS.gene068240:CDS |
| CTTATCAAGATTAAATACGA+TGG | 0.585453 | 2.2:+47573020 | MS.gene068240:CDS |
| TGGCAGCTGCACCAAATGCA+AGG | 0.586864 | 2.2:-47573693 | None:intergenic |
| AGAGGATTATGCTGATGAAG+AGG | 0.595984 | 2.2:+47569188 | MS.gene068240:CDS |
| TCCTTATGATCCAAACGTGA+TGG | 0.596727 | 2.2:+47572748 | MS.gene068240:CDS |
| GAAGCAAATGCCGACTGACA+CGG | 0.598268 | 2.2:-47571862 | None:intergenic |
| TCACAAACAACTATGGTGTG+TGG | 0.608110 | 2.2:+47571355 | MS.gene068240:CDS |
| TTTATTATCAATATATACAA+CGG | 0.613565 | 2.2:-47571810 | None:intergenic |
| GAATGGTCTTATATCCCAGT+TGG | 0.614473 | 2.2:+47573640 | MS.gene068240:CDS |
| GCATGCAAATCGTACCTGCA+GGG | 0.621177 | 2.2:-47572118 | None:intergenic |
| AGGATTGTTGAGGCTAGCAA+TGG | 0.625598 | 2.2:+47572058 | MS.gene068240:CDS |
| TTGGTAAGGATCCACCAACT+GGG | 0.640890 | 2.2:-47573654 | None:intergenic |
| AAAAGTAGAAAGGATTGTTG+AGG | 0.645770 | 2.2:+47572048 | MS.gene068240:CDS |
| GTGTGTGCAAACAGCTTATG+GGG | 0.647388 | 2.2:+47572337 | MS.gene068240:CDS |
| GGATATGCAATCTAAGCTTG+CGG | 0.648233 | 2.2:+47569272 | MS.gene068240:CDS |
| CCATCTCCAATAGAGATAGG+TGG | 0.670865 | 2.2:-47571225 | None:intergenic |
| AAACAACTATGGTGTGTGGG+AGG | 0.673871 | 2.2:+47571359 | MS.gene068240:CDS |
| TATCAAGATTAAATACGATG+GGG | 0.695831 | 2.2:+47573022 | MS.gene068240:CDS |
| AAAGTGAATGCGAAAGCAGG+TGG | 0.705389 | 2.2:+47569135 | MS.gene068240:CDS |
| ATGTGACAATGTCATGCCTG+TGG | 0.708640 | 2.2:-47573731 | None:intergenic |
| TGTGCAAACAGCTTATGGGG+TGG | 0.724137 | 2.2:+47572340 | MS.gene068240:CDS |
| CTATTGCAGTATGAGGTTGG+GGG | 0.774566 | 2.2:+47572305 | MS.gene068240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGATAGTAAAAATATA+AGG | - | chr2.2:47572531-47572550 | None:intergenic | 10.0% |
| !! | TTTATTATCAATATATACAA+CGG | - | chr2.2:47571813-47571832 | None:intergenic | 10.0% |
| !!! | CATTTTTAATCAAAAAATAA+AGG | - | chr2.2:47569869-47569888 | None:intergenic | 10.0% |
| !! | AGAAGTTTCAATATATAATA+AGG | - | chr2.2:47572233-47572252 | None:intergenic | 15.0% |
| !! | ATTAAATGTATAAAATGTGA+TGG | + | chr2.2:47572667-47572686 | MS.gene068240:intron | 15.0% |
| !! | GAAGTTTCAATATATAATAA+GGG | - | chr2.2:47572232-47572251 | None:intergenic | 15.0% |
| !!! | AAATATTTTCACAAAGTAAA+CGG | - | chr2.2:47572474-47572493 | None:intergenic | 15.0% |
| !! | AAATGTAAAGAACAATGTTA+TGG | + | chr2.2:47569884-47569903 | MS.gene068240:intron | 20.0% |
| !! | AAGTTACATGAATATGATAT+TGG | + | chr2.2:47569559-47569578 | MS.gene068240:intron | 20.0% |
| !! | AATAAAAATCCGATTTCAAT+TGG | + | chr2.2:47571827-47571846 | MS.gene068240:CDS | 20.0% |
| !! | ATGAATTACAAATCTACAAA+AGG | - | chr2.2:47571980-47571999 | None:intergenic | 20.0% |
| !! | ATGGTTCTTTCTAAATTATA+TGG | + | chr2.2:47573198-47573217 | MS.gene068240:intron | 20.0% |
| !! | GCAATTAAAATTGAGTTTAA+TGG | - | chr2.2:47569623-47569642 | None:intergenic | 20.0% |
| !! | GTGTAGATATTTGAATTATA+TGG | + | chr2.2:47570105-47570124 | MS.gene068240:intron | 20.0% |
| !! | TATGTTCTGTCAATTTAAAA+TGG | + | chr2.2:47569995-47570014 | MS.gene068240:intron | 20.0% |
| !! | TGGTTCTTTCTAAATTATAT+GGG | + | chr2.2:47573199-47573218 | MS.gene068240:intron | 20.0% |
| !! | TTAAATTATTAAGGATGGAA+TGG | + | chr2.2:47570653-47570672 | MS.gene068240:intron | 20.0% |
| !! | TTATCAAGATTAAATACGAT+GGG | + | chr2.2:47573021-47573040 | MS.gene068240:CDS | 20.0% |
| !!! | AAATGTGCTTTTTAAACATA+TGG | + | chr2.2:47570783-47570802 | MS.gene068240:intron | 20.0% |
| !!! | AATTCATATTAATTTTCCCT+AGG | + | chr2.2:47571993-47572012 | MS.gene068240:intron | 20.0% |
| !!! | ATAGAAATGTTTTCAAAAAG+TGG | + | chr2.2:47572499-47572518 | MS.gene068240:intron | 20.0% |
| !!! | GAAAATATATACTGTTTTCA+AGG | - | chr2.2:47571672-47571691 | None:intergenic | 20.0% |
| !!! | TATAACATTTTGAGCTTAAT+TGG | - | chr2.2:47569743-47569762 | None:intergenic | 20.0% |
| !!! | TTATTTCTGAATTAACTTCT+TGG | + | chr2.2:47571937-47571956 | MS.gene068240:intron | 20.0% |
| !!! | TTTTATCTTCAAATTTGTGT+AGG | + | chr2.2:47573618-47573637 | MS.gene068240:intron | 20.0% |
| ! | AAAAACTTATGAAGAGGTAA+GGG | + | chr2.2:47573056-47573075 | MS.gene068240:intron | 25.0% |
| ! | AAATTATAATGAAGTGCACT+TGG | - | chr2.2:47571745-47571764 | None:intergenic | 25.0% |
| ! | AAGATATGTAATAGTACGAT+AGG | - | chr2.2:47573333-47573352 | None:intergenic | 25.0% |
| ! | AATATATAATAAGGGAAACC+TGG | - | chr2.2:47572224-47572243 | None:intergenic | 25.0% |
| ! | ACAATGTTATGGAATTACTT+TGG | + | chr2.2:47569895-47569914 | MS.gene068240:intron | 25.0% |
| ! | AGGGAAGTTTCAATATATTA+TGG | - | chr2.2:47572171-47572190 | None:intergenic | 25.0% |
| ! | AGTTACAAAAACTTATGAAG+AGG | + | chr2.2:47573050-47573069 | MS.gene068240:CDS | 25.0% |
| ! | AGTTCATTGCTTGAAAAAAA+TGG | - | chr2.2:47571017-47571036 | None:intergenic | 25.0% |
| ! | ATGTTATGTTGTTAAAGACA+AGG | - | chr2.2:47572623-47572642 | None:intergenic | 25.0% |
| ! | ATTAGAAAGATATAGCAAGA+AGG | - | chr2.2:47571401-47571420 | None:intergenic | 25.0% |
| ! | ATTTAATTAGTATACTCTGC+TGG | + | chr2.2:47569397-47569416 | MS.gene068240:intron | 25.0% |
| ! | CAACTAAGTATTATCCTATA+TGG | - | chr2.2:47573280-47573299 | None:intergenic | 25.0% |
| ! | CTTATCAAGATTAAATACGA+TGG | + | chr2.2:47573020-47573039 | MS.gene068240:CDS | 25.0% |
| ! | GTATTATCCTATATGGAAAA+TGG | - | chr2.2:47573273-47573292 | None:intergenic | 25.0% |
| ! | TATCAAGATTAAATACGATG+GGG | + | chr2.2:47573022-47573041 | MS.gene068240:CDS | 25.0% |
| ! | TCAAGTATTACATGATACTT+GGG | + | chr2.2:47570807-47570826 | MS.gene068240:intron | 25.0% |
| ! | TCCATCCTTAATAATTTAAC+TGG | - | chr2.2:47570652-47570671 | None:intergenic | 25.0% |
| ! | TCCATTAAATGAAATCTGTT+AGG | - | chr2.2:47571573-47571592 | None:intergenic | 25.0% |
| ! | TCTATGGTTCATAAAAAGAA+GGG | - | chr2.2:47571501-47571520 | None:intergenic | 25.0% |
| ! | TTCTATGGTTCATAAAAAGA+AGG | - | chr2.2:47571502-47571521 | None:intergenic | 25.0% |
| !! | AAATGTTTTCAAAAAGTGGA+AGG | + | chr2.2:47572503-47572522 | MS.gene068240:intron | 25.0% |
| !! | AACAGTATATATTTTCTTGC+TGG | + | chr2.2:47571676-47571695 | MS.gene068240:intron | 25.0% |
| !! | AATGTTTTCAAAAAGTGGAA+GGG | + | chr2.2:47572504-47572523 | MS.gene068240:intron | 25.0% |
| !! | ACAGTATATATTTTCTTGCT+GGG | + | chr2.2:47571677-47571696 | MS.gene068240:intron | 25.0% |
| !! | ATTATTAATGAGAGTACAAG+GGG | + | chr2.2:47570342-47570361 | MS.gene068240:intron | 25.0% |
| !! | GATTATTAATGAGAGTACAA+GGG | + | chr2.2:47570341-47570360 | MS.gene068240:intron | 25.0% |
| !! | TGATTATTAATGAGAGTACA+AGG | + | chr2.2:47570340-47570359 | MS.gene068240:intron | 25.0% |
| !! | TTCATTATAATTTCAGGTCT+TGG | + | chr2.2:47571752-47571771 | MS.gene068240:intron | 25.0% |
| AAAAGTAGAAAGGATTGTTG+AGG | + | chr2.2:47572048-47572067 | MS.gene068240:CDS | 30.0% | |
| AAAATTTGATTGTACAGGGT+TGG | - | chr2.2:47570372-47570391 | None:intergenic | 30.0% | |
| AAATGGTGTCTCATTTCTTT+AGG | + | chr2.2:47570073-47570092 | MS.gene068240:intron | 30.0% | |
| AACAAGGTATAGATGATTTG+GGG | - | chr2.2:47570841-47570860 | None:intergenic | 30.0% | |
| AACAGAACTGCAATACTTAA+TGG | - | chr2.2:47572916-47572935 | None:intergenic | 30.0% | |
| AACTTCTGTCCTGTTATTAT+AGG | + | chr2.2:47572246-47572265 | MS.gene068240:intron | 30.0% | |
| AAGTATTACATGATACTTGG+GGG | + | chr2.2:47570809-47570828 | MS.gene068240:intron | 30.0% | |
| AATGCAACAGAAAAAGTCTA+TGG | + | chr2.2:47569251-47569270 | MS.gene068240:CDS | 30.0% | |
| AATTTCTATTGTGACAAGGA+TGG | + | chr2.2:47570202-47570221 | MS.gene068240:intron | 30.0% | |
| AGAACAAGGTATAGATGATT+TGG | - | chr2.2:47570843-47570862 | None:intergenic | 30.0% | |
| AGTAACAAGCCTATAATAAC+AGG | - | chr2.2:47572258-47572277 | None:intergenic | 30.0% | |
| ATTATACTGGAGAACATTGA+CGG | + | chr2.2:47573437-47573456 | MS.gene068240:intron | 30.0% | |
| ATTTCAATTGGACGTTCTTA+TGG | + | chr2.2:47571839-47571858 | MS.gene068240:CDS | 30.0% | |
| CAAAAACTTATGAAGAGGTA+AGG | + | chr2.2:47573055-47573074 | MS.gene068240:intron | 30.0% | |
| CAAGGACATAAATATCAAAC+TGG | - | chr2.2:47571654-47571673 | None:intergenic | 30.0% | |
| CAAGTATTACATGATACTTG+GGG | + | chr2.2:47570808-47570827 | MS.gene068240:intron | 30.0% | |
| CTAGCTTATTTGAGCTTAAT+TGG | - | chr2.2:47569660-47569679 | None:intergenic | 30.0% | |
| CTCAAGTATTACATGATACT+TGG | + | chr2.2:47570806-47570825 | MS.gene068240:intron | 30.0% | |
| GAACAAGGTATAGATGATTT+GGG | - | chr2.2:47570842-47570861 | None:intergenic | 30.0% | |
| GAGTAATTTCTATTGTGACA+AGG | + | chr2.2:47570198-47570217 | MS.gene068240:intron | 30.0% | |
| GCCAGTTAAATTATTAAGGA+TGG | + | chr2.2:47570648-47570667 | MS.gene068240:intron | 30.0% | |
| GCCTAACAGATTTCATTTAA+TGG | + | chr2.2:47571569-47571588 | MS.gene068240:intron | 30.0% | |
| GGAGTTGTGATTTAAATTTG+AGG | + | chr2.2:47570543-47570562 | MS.gene068240:intron | 30.0% | |
| GGATTAAAAGTTGGACTTAT+TGG | + | chr2.2:47571318-47571337 | MS.gene068240:CDS | 30.0% | |
| GTGCACTTCATTATAATTTC+AGG | + | chr2.2:47571746-47571765 | MS.gene068240:intron | 30.0% | |
| GTTCCACATAAATTTAGCAA+GGG | + | chr2.2:47573221-47573240 | MS.gene068240:intron | 30.0% | |
| TAAGAACGTCCAATTGAAAT+CGG | - | chr2.2:47571839-47571858 | None:intergenic | 30.0% | |
| TAAGGAGAAAGAAGATTTGT+TGG | + | chr2.2:47569064-47569083 | MS.gene068240:CDS | 30.0% | |
| TATGTTGTTAAAGACAAGGA+AGG | - | chr2.2:47572619-47572638 | None:intergenic | 30.0% | |
| TCGCAAAATTTGATTGTACA+GGG | - | chr2.2:47570376-47570395 | None:intergenic | 30.0% | |
| TCTATTATGTAACAGCTCAA+AGG | - | chr2.2:47573518-47573537 | None:intergenic | 30.0% | |
| TCTTCAAATTTGTGTAGGAA+TGG | + | chr2.2:47573623-47573642 | MS.gene068240:intron | 30.0% | |
| TGAGCTGTTACATAATAGAT+GGG | + | chr2.2:47573519-47573538 | MS.gene068240:intron | 30.0% | |
| TGCAGCCAGTTAAATTATTA+AGG | + | chr2.2:47570644-47570663 | MS.gene068240:intron | 30.0% | |
| TTAATTGTTGTACTGTACAG+TGG | + | chr2.2:47572422-47572441 | MS.gene068240:intron | 30.0% | |
| TTCACGAAGAATTGTTAAGA+AGG | + | chr2.2:47571882-47571901 | MS.gene068240:CDS | 30.0% | |
| TTGAGCTGTTACATAATAGA+TGG | + | chr2.2:47573518-47573537 | MS.gene068240:intron | 30.0% | |
| TTTATTCATAGAAAGAGCCA+TGG | - | chr2.2:47570868-47570887 | None:intergenic | 30.0% | |
| ! | AAAAAAATTATCGAGTTGCC+AGG | + | chr2.2:47570162-47570181 | MS.gene068240:intron | 30.0% |
| ! | AAAAAATTATCGAGTTGCCA+GGG | + | chr2.2:47570163-47570182 | MS.gene068240:intron | 30.0% |
| ! | AACACTTTTGTATGAGACAT+GGG | - | chr2.2:47572854-47572873 | None:intergenic | 30.0% |
| ! | AGTTGTTGATTATATCGAGT+TGG | + | chr2.2:47569330-47569349 | MS.gene068240:intron | 30.0% |
| ! | ATGAAATTGTAGCTCCTTTT+AGG | + | chr2.2:47570128-47570147 | MS.gene068240:intron | 30.0% |
| ! | ATGTTTTCAAAAAGTGGAAG+GGG | + | chr2.2:47572505-47572524 | MS.gene068240:intron | 30.0% |
| ! | GCTAGCTGTATTATATTTTG+AGG | + | chr2.2:47573089-47573108 | MS.gene068240:intron | 30.0% |
| ! | TATTTTACACCTCAAGTTCA+TGG | + | chr2.2:47569597-47569616 | MS.gene068240:intron | 30.0% |
| ! | TGAAATTGTAGCTCCTTTTA+GGG | + | chr2.2:47570129-47570148 | MS.gene068240:intron | 30.0% |
| !! | TCAAGCACAAATTGTCATTT+TGG | + | chr2.2:47570941-47570960 | MS.gene068240:intron | 30.0% |
| !! | TCATACAAAAGTGTTCTTTG+AGG | + | chr2.2:47572859-47572878 | MS.gene068240:CDS | 30.0% |
| !!! | GGTTTCTAGTGTTTTTATTC+AGG | + | chr2.2:47572389-47572408 | MS.gene068240:intron | 30.0% |
| !!! | TGGGACTAATGCATTTTTTA+GGG | + | chr2.2:47570756-47570775 | MS.gene068240:intron | 30.0% |
| AAAAGTTGGACTTATTGGTC+CGG | + | chr2.2:47571323-47571342 | MS.gene068240:CDS | 35.0% | |
| AAACTATTGCAGTATGAGGT+TGG | + | chr2.2:47572302-47572321 | MS.gene068240:CDS | 35.0% | |
| AAAGGACAATTGGAAATCGA+GGG | - | chr2.2:47573500-47573519 | None:intergenic | 35.0% | |
| AACTATTGCAGTATGAGGTT+GGG | + | chr2.2:47572303-47572322 | MS.gene068240:CDS | 35.0% | |
| AAGGTTGTATTGAGCATGTT+TGG | + | chr2.2:47571780-47571799 | MS.gene068240:CDS | 35.0% | |
| AATGGCATGTTACAAAGGTT+AGG | + | chr2.2:47570671-47570690 | MS.gene068240:intron | 35.0% | |
| AATTAGCAATTGCTCCTTGA+AGG | + | chr2.2:47570515-47570534 | MS.gene068240:intron | 35.0% | |
| ACACCATAGTTGTTTGTGAA+AGG | - | chr2.2:47571354-47571373 | None:intergenic | 35.0% | |
| AGATAAATGTTACCAAGTCC+GGG | + | chr2.2:47572563-47572582 | MS.gene068240:intron | 35.0% | |
| ATAATGAAGTGCACTTGGTA+AGG | - | chr2.2:47571740-47571759 | None:intergenic | 35.0% | |
| ATCTTGGCTCAAAAGTAGAA+AGG | + | chr2.2:47572038-47572057 | MS.gene068240:CDS | 35.0% | |
| ATGGCATGTTACAAAGGTTA+GGG | + | chr2.2:47570672-47570691 | MS.gene068240:intron | 35.0% | |
| CAAAATTAGCAATTGTGTGC+AGG | + | chr2.2:47570719-47570738 | MS.gene068240:intron | 35.0% | |
| CACCATAGTTGTTTGTGAAA+GGG | - | chr2.2:47571353-47571372 | None:intergenic | 35.0% | |
| CAGATAAATGTTACCAAGTC+CGG | + | chr2.2:47572562-47572581 | MS.gene068240:intron | 35.0% | |
| CTAGCAATACACTTTCTAAC+AGG | + | chr2.2:47573116-47573135 | MS.gene068240:intron | 35.0% | |
| CTCGCAAAATTTGATTGTAC+AGG | - | chr2.2:47570377-47570396 | None:intergenic | 35.0% | |
| GCAGGTTCTATAAAGAAAGT+GGG | + | chr2.2:47570737-47570756 | MS.gene068240:intron | 35.0% | |
| GCATTGTTAACTTTCATGCA+CGG | + | chr2.2:47570986-47571005 | MS.gene068240:intron | 35.0% | |
| GCTGAAAATTGAATGGTTCT+CGG | + | chr2.2:47573166-47573185 | MS.gene068240:intron | 35.0% | |
| GGCAAGTTAGGATTAAAAGT+TGG | + | chr2.2:47571309-47571328 | MS.gene068240:CDS | 35.0% | |
| GGCATTGCATAAAGAAATGT+TGG | - | chr2.2:47572833-47572852 | None:intergenic | 35.0% | |
| GGTTCCACATAAATTTAGCA+AGG | + | chr2.2:47573220-47573239 | MS.gene068240:intron | 35.0% | |
| GTACTAGATCTAGTCGTTAT+TGG | + | chr2.2:47571249-47571268 | MS.gene068240:CDS | 35.0% | |
| TATAGAGAAATTCCAATCGC+AGG | + | chr2.2:47572942-47572961 | MS.gene068240:intron | 35.0% | |
| TATTGTGACAAGGATGGTTA+TGG | + | chr2.2:47570208-47570227 | MS.gene068240:intron | 35.0% | |
| TCAAGGAGCAATTGCTAATT+GGG | - | chr2.2:47570515-47570534 | None:intergenic | 35.0% | |
| TGCAGGTTCTATAAAGAAAG+TGG | + | chr2.2:47570736-47570755 | MS.gene068240:intron | 35.0% | |
| TGCGAGATTTAAGAATTCAC+TGG | + | chr2.2:47570391-47570410 | MS.gene068240:intron | 35.0% | |
| TGGTGTGATATCTCGTAAAA+AGG | - | chr2.2:47570491-47570510 | None:intergenic | 35.0% | |
| TTAAGCTCAAATAAGCTAGC+AGG | + | chr2.2:47569661-47569680 | MS.gene068240:intron | 35.0% | |
| TTATACTGGAGAACATTGAC+GGG | + | chr2.2:47573438-47573457 | MS.gene068240:intron | 35.0% | |
| TTCAAGGAGCAATTGCTAAT+TGG | - | chr2.2:47570516-47570535 | None:intergenic | 35.0% | |
| TTGTATTGAGCATGTTTGGA+AGG | + | chr2.2:47571784-47571803 | MS.gene068240:CDS | 35.0% | |
| TTTGCATAAGTCCTTCTTTG+CGG | + | chr2.2:47569040-47569059 | MS.gene068240:CDS | 35.0% | |
| ! | AAAAATTATCGAGTTGCCAG+GGG | + | chr2.2:47570164-47570183 | MS.gene068240:intron | 35.0% |
| ! | ACATTTTCTGATATTTGCCG+CGG | + | chr2.2:47573363-47573382 | MS.gene068240:intron | 35.0% |
| ! | CCATTCAATTTTCAGCCAAT+AGG | - | chr2.2:47573162-47573181 | None:intergenic | 35.0% |
| ! | CCTATTGGCTGAAAATTGAA+TGG | + | chr2.2:47573159-47573178 | MS.gene068240:intron | 35.0% |
| ! | GAACACTTTTGTATGAGACA+TGG | - | chr2.2:47572855-47572874 | None:intergenic | 35.0% |
| ! | GAAGAGGATTTTGTTAAAGC+TGG | + | chr2.2:47569204-47569223 | MS.gene068240:CDS | 35.0% |
| ! | GATGCATCCATTTTCCATAT+AGG | + | chr2.2:47573263-47573282 | MS.gene068240:intron | 35.0% |
| ! | GCTGAAAGCATGTATTATAC+TGG | + | chr2.2:47573424-47573443 | MS.gene068240:intron | 35.0% |
| ! | TCAATTTTCAGCCAATAGGA+GGG | - | chr2.2:47573158-47573177 | None:intergenic | 35.0% |
| ! | TTCAATTTTCAGCCAATAGG+AGG | - | chr2.2:47573159-47573178 | None:intergenic | 35.0% |
| !! | CTCTAAGATCACTGTTTCTA+TGG | - | chr2.2:47571517-47571536 | None:intergenic | 35.0% |
| !! | TTTCTAGTTCCATCCCTAAA+AGG | - | chr2.2:47570145-47570164 | None:intergenic | 35.0% |
| !!! | GGGACTAATGCATTTTTTAG+GGG | + | chr2.2:47570757-47570776 | MS.gene068240:intron | 35.0% |
| !!! | GTGGGACTAATGCATTTTTT+AGG | + | chr2.2:47570755-47570774 | MS.gene068240:intron | 35.0% |
| AACTTCCCTAAACCTTGCTA+TGG | + | chr2.2:47572182-47572201 | MS.gene068240:intron | 40.0% | |
| AAGACGTGTATGCCATAACA+CGG | - | chr2.2:47570916-47570935 | None:intergenic | 40.0% | |
| AATAGTACGATAGGACAGAG+TGG | - | chr2.2:47573324-47573343 | None:intergenic | 40.0% | |
| AATTGCTCCTTGAAGGACAT+AGG | + | chr2.2:47570522-47570541 | MS.gene068240:intron | 40.0% | |
| ACAAAACTACCTCCATAGCA+AGG | - | chr2.2:47572197-47572216 | None:intergenic | 40.0% | |
| ACCATCACGTTTGGATCATA+AGG | - | chr2.2:47572752-47572771 | None:intergenic | 40.0% | |
| ACTATTGCAGTATGAGGTTG+GGG | + | chr2.2:47572304-47572323 | MS.gene068240:CDS | 40.0% | |
| ACTCCATCTCCAATAGAGAT+AGG | - | chr2.2:47571231-47571250 | None:intergenic | 40.0% | |
| AGAGGATTATGCTGATGAAG+AGG | + | chr2.2:47569188-47569207 | MS.gene068240:CDS | 40.0% | |
| AGGGAAACTATTGCAGTATG+AGG | + | chr2.2:47572298-47572317 | MS.gene068240:CDS | 40.0% | |
| AGGGCAAAACTGAAATCGTA+AGG | - | chr2.2:47571482-47571501 | None:intergenic | 40.0% | |
| AGGGTAAAAGACTGCTATCA+AGG | - | chr2.2:47573481-47573500 | None:intergenic | 40.0% | |
| AGGTTCTTCTGTTCTGTGTT+TGG | - | chr2.2:47573676-47573695 | None:intergenic | 40.0% | |
| ATGAAAGTGAATGCGAAAGC+AGG | + | chr2.2:47569132-47569151 | MS.gene068240:CDS | 40.0% | |
| ATTGAATGGTTCTCGGACTT+TGG | + | chr2.2:47573173-47573192 | MS.gene068240:intron | 40.0% | |
| CAAAGGACAATTGGAAATCG+AGG | - | chr2.2:47573501-47573520 | None:intergenic | 40.0% | |
| CACAAACAACTATGGTGTGT+GGG | + | chr2.2:47571356-47571375 | MS.gene068240:CDS | 40.0% | |
| CTCCCTTTCACAAACAACTA+TGG | + | chr2.2:47571348-47571367 | MS.gene068240:CDS | 40.0% | |
| CTTCTGTTCTGTGTTTGGTA+AGG | - | chr2.2:47573671-47573690 | None:intergenic | 40.0% | |
| GAACAGAAGAACCTTGCATT+TGG | + | chr2.2:47573682-47573701 | MS.gene068240:CDS | 40.0% | |
| GAGCCCTTGCTAAATTTATG+TGG | - | chr2.2:47573227-47573246 | None:intergenic | 40.0% | |
| GATGGAATGGCATGTTACAA+AGG | + | chr2.2:47570666-47570685 | MS.gene068240:intron | 40.0% | |
| GGATATGCAATCTAAGCTTG+CGG | + | chr2.2:47569272-47569291 | MS.gene068240:CDS | 40.0% | |
| GGGCAAAACTGAAATCGTAA+GGG | - | chr2.2:47571481-47571500 | None:intergenic | 40.0% | |
| GGGCTCATCTTGTCAAAAAA+AGG | + | chr2.2:47573241-47573260 | MS.gene068240:intron | 40.0% | |
| GGGTAAAAGACTGCTATCAA+GGG | - | chr2.2:47573480-47573499 | None:intergenic | 40.0% | |
| GTAACAGCTCAAAGGACAAT+TGG | - | chr2.2:47573510-47573529 | None:intergenic | 40.0% | |
| GTTTAATGGCCATGAACTTG+AGG | - | chr2.2:47569609-47569628 | None:intergenic | 40.0% | |
| TAAAGACAAGGAAGGAAGCA+TGG | - | chr2.2:47572611-47572630 | None:intergenic | 40.0% | |
| TAAGTCCTTCTTTGCGGTTA+AGG | + | chr2.2:47569046-47569065 | MS.gene068240:CDS | 40.0% | |
| TACCTCCATAGCAAGGTTTA+GGG | - | chr2.2:47572190-47572209 | None:intergenic | 40.0% | |
| TCACAAACAACTATGGTGTG+TGG | + | chr2.2:47571355-47571374 | MS.gene068240:CDS | 40.0% | |
| TCCATGAAAACCATCACGTT+TGG | - | chr2.2:47572761-47572780 | None:intergenic | 40.0% | |
| TCCTTATGATCCAAACGTGA+TGG | + | chr2.2:47572748-47572767 | MS.gene068240:CDS | 40.0% | |
| TCTATACCTTGTTCTGTCCA+TGG | + | chr2.2:47570848-47570867 | MS.gene068240:intron | 40.0% | |
| TGTGTGTGCAAACAGCTTAT+GGG | + | chr2.2:47572336-47572355 | MS.gene068240:CDS | 40.0% | |
| TTAACTTTCACGTACAGCAC+TGG | + | chr2.2:47571076-47571095 | MS.gene068240:intron | 40.0% | |
| TTATGAAGAGGTAAGGGCTT+TGG | + | chr2.2:47573062-47573081 | MS.gene068240:intron | 40.0% | |
| TTGCGGATGGTATATTACGA+GGG | - | chr2.2:47570461-47570480 | None:intergenic | 40.0% | |
| TTGTTTGTGAAAGGGAGATC+CGG | - | chr2.2:47571345-47571364 | None:intergenic | 40.0% | |
| TTTCTCCTTAACCGCAAAGA+AGG | - | chr2.2:47569054-47569073 | None:intergenic | 40.0% | |
| ! | AAATTGATGACCAATGACCG+CGG | - | chr2.2:47573383-47573402 | None:intergenic | 40.0% |
| ! | AAGGTATAGATGATTTGGGG+CGG | - | chr2.2:47570838-47570857 | None:intergenic | 40.0% |
| ! | ATTTCAGGTCTTGGACTTGA+AGG | + | chr2.2:47571761-47571780 | MS.gene068240:intron | 40.0% |
| ! | GAGGATTTTGTTAAAGCTGG+TGG | + | chr2.2:47569207-47569226 | MS.gene068240:CDS | 40.0% |
| ! | GAGTTGTGTTGTTGCTAAAG+AGG | + | chr2.2:47569170-47569189 | MS.gene068240:CDS | 40.0% |
| ! | GATCTAGTCGTTATTGGTTG+TGG | + | chr2.2:47571255-47571274 | MS.gene068240:CDS | 40.0% |
| ! | TCCAAACGTGATGGTTTTCA+TGG | + | chr2.2:47572757-47572776 | MS.gene068240:CDS | 40.0% |
| !! | ATTGTAGCTCCTTTTAGGGA+TGG | + | chr2.2:47570133-47570152 | MS.gene068240:intron | 40.0% |
| !! | GAATGGTCTTATATCCCAGT+TGG | + | chr2.2:47573640-47573659 | MS.gene068240:CDS | 40.0% |
| AAACAACTATGGTGTGTGGG+AGG | + | chr2.2:47571359-47571378 | MS.gene068240:CDS | 45.0% | |
| AAAGAGCCATGGACAGAACA+AGG | - | chr2.2:47570857-47570876 | None:intergenic | 45.0% | |
| AAAGTGAATGCGAAAGCAGG+TGG | + | chr2.2:47569135-47569154 | MS.gene068240:CDS | 45.0% | |
| ACCAATACTCAGAGACTTCC+CGG | - | chr2.2:47572584-47572603 | None:intergenic | 45.0% | |
| AGACGTGTATGCCATAACAC+GGG | - | chr2.2:47570915-47570934 | None:intergenic | 45.0% | |
| AGCGAGAAACTTAACGGCAA+TGG | + | chr2.2:47569014-47569033 | MS.gene068240:CDS | 45.0% | |
| AGGATTGTTGAGGCTAGCAA+TGG | + | chr2.2:47572058-47572077 | MS.gene068240:CDS | 45.0% | |
| ATGTGACAATGTCATGCCTG+TGG | - | chr2.2:47573734-47573753 | None:intergenic | 45.0% | |
| CACAACTCCTATGTCCTTCA+AGG | - | chr2.2:47570532-47570551 | None:intergenic | 45.0% | |
| CAGTTGCCACCTATCTCTAT+TGG | + | chr2.2:47571219-47571238 | MS.gene068240:intron | 45.0% | |
| CCACCTATCTCTATTGGAGA+TGG | + | chr2.2:47571225-47571244 | MS.gene068240:CDS | 45.0% | |
| CCATCTCCAATAGAGATAGG+TGG | - | chr2.2:47571228-47571247 | None:intergenic | 45.0% | |
| CGCCACAATCTCATGATATG+TGG | + | chr2.2:47570244-47570263 | MS.gene068240:intron | 45.0% | |
| CGCCACATATCATGAGATTG+TGG | - | chr2.2:47570249-47570268 | None:intergenic | 45.0% | |
| CGTTGGAGCGAGAAACTTAA+CGG | + | chr2.2:47569008-47569027 | MS.gene068240:CDS | 45.0% | |
| CTACCTCCATAGCAAGGTTT+AGG | - | chr2.2:47572191-47572210 | None:intergenic | 45.0% | |
| CTATTGCAGTATGAGGTTGG+GGG | + | chr2.2:47572305-47572324 | MS.gene068240:CDS | 45.0% | |
| CTTCGTCGAACGCAACAATT+CGG | + | chr2.2:47569100-47569119 | MS.gene068240:CDS | 45.0% | |
| CTTGCGGATGGTATATTACG+AGG | - | chr2.2:47570462-47570481 | None:intergenic | 45.0% | |
| GCAACTGCAAGAGCGATTAA+CGG | - | chr2.2:47571206-47571225 | None:intergenic | 45.0% | |
| GCAATCTAAGCTTGCGGATA+AGG | + | chr2.2:47569278-47569297 | MS.gene068240:CDS | 45.0% | |
| GGAGCAATTGCTAATTGGGA+TGG | - | chr2.2:47570511-47570530 | None:intergenic | 45.0% | |
| GTGTGGGAGGACGAATTTAA+AGG | + | chr2.2:47571372-47571391 | MS.gene068240:CDS | 45.0% | |
| GTGTGTGCAAACAGCTTATG+GGG | + | chr2.2:47572337-47572356 | MS.gene068240:CDS | 45.0% | |
| GTGTGTGTGCAAACAGCTTA+TGG | + | chr2.2:47572335-47572354 | MS.gene068240:CDS | 45.0% | |
| TTGGTAAGGATCCACCAACT+GGG | - | chr2.2:47573657-47573676 | None:intergenic | 45.0% | |
| TTTGGTAAGGATCCACCAAC+TGG | - | chr2.2:47573658-47573677 | None:intergenic | 45.0% | |
| ! | AACAGTGTGCTGACAAGCTT+AGG | + | chr2.2:47572446-47572465 | MS.gene068240:intron | 45.0% |
| ! | ATGCCATAACACGGGTTACA+CGG | - | chr2.2:47570907-47570926 | None:intergenic | 45.0% |
| ! | TGGTTCTCGGACTTTGGAAA+TGG | + | chr2.2:47573179-47573198 | MS.gene068240:intron | 45.0% |
| ! | TTCCCTAAACCTTGCTATGG+AGG | + | chr2.2:47572185-47572204 | MS.gene068240:intron | 45.0% |
| !! | AGGCTTGTTACTGTTGCATC+AGG | + | chr2.2:47572266-47572285 | MS.gene068240:intron | 45.0% |
| !! | ATCGAGTTGGCATTGATCGT+CGG | + | chr2.2:47569343-47569362 | MS.gene068240:intron | 45.0% |
| !! | CGTAAAAAGGTGCTCTCTTG+CGG | - | chr2.2:47570478-47570497 | None:intergenic | 45.0% |
| !! | TGGTCTTATATCCCAGTTGG+TGG | + | chr2.2:47573643-47573662 | MS.gene068240:CDS | 45.0% |
| !!! | TTTTTTTTTGTTATAATTTT+AGG | + | chr2.2:47572715-47572734 | MS.gene068240:intron | 5.0% |
| AGCATGCAAATCGTACCTGC+AGG | - | chr2.2:47572122-47572141 | None:intergenic | 50.0% | |
| AGCTTATGGGGTGGAAGTTG+AGG | + | chr2.2:47572349-47572368 | MS.gene068240:CDS | 50.0% | |
| ATGATACTGTAGTGCCCTGC+AGG | + | chr2.2:47572104-47572123 | MS.gene068240:CDS | 50.0% | |
| ATGGGGTGGAAGTTGAGGTA+GGG | + | chr2.2:47572354-47572373 | MS.gene068240:intron | 50.0% | |
| CCAAACACGTTTCCTGCGAT+TGG | - | chr2.2:47572957-47572976 | None:intergenic | 50.0% | |
| CCAATCGCAGGAAACGTGTT+TGG | + | chr2.2:47572954-47572973 | MS.gene068240:intron | 50.0% | |
| CTGATATTTGCCGCGGTCAT+TGG | + | chr2.2:47573370-47573389 | MS.gene068240:intron | 50.0% | |
| CTTGCTCTAGCTGCTGAATC+TGG | + | chr2.2:47571288-47571307 | MS.gene068240:CDS | 50.0% | |
| GAGTCAGGTGTCTCGTATCT+TGG | + | chr2.2:47572022-47572041 | MS.gene068240:CDS | 50.0% | |
| GCATGCAAATCGTACCTGCA+GGG | - | chr2.2:47572121-47572140 | None:intergenic | 50.0% | |
| GCTGCTGAATCTGGCAAGTT+AGG | + | chr2.2:47571297-47571316 | MS.gene068240:CDS | 50.0% | |
| GCTGTTTGCACACACACCTT+TGG | - | chr2.2:47572332-47572351 | None:intergenic | 50.0% | |
| GTTCTTATGGCCGTGTCAGT+CGG | + | chr2.2:47571852-47571871 | MS.gene068240:CDS | 50.0% | |
| TATGGGGTGGAAGTTGAGGT+AGG | + | chr2.2:47572353-47572372 | MS.gene068240:intron | 50.0% | |
| TCCGGGAAGTCTCTGAGTAT+TGG | + | chr2.2:47572580-47572599 | MS.gene068240:intron | 50.0% | |
| TGTGCAAACAGCTTATGGGG+TGG | + | chr2.2:47572340-47572359 | MS.gene068240:CDS | 50.0% | |
| TTGCATCAGGAGCAGCTTCA+GGG | + | chr2.2:47572279-47572298 | MS.gene068240:CDS | 50.0% | |
| ! | GAAGCAAATGCCGACTGACA+CGG | - | chr2.2:47571865-47571884 | None:intergenic | 50.0% |
| ! | GTTATTGGTTGTGGTCCTGC+TGG | + | chr2.2:47571264-47571283 | MS.gene068240:CDS | 50.0% |
| ! | TACTCTACAGTTTTCGCCCC+TGG | - | chr2.2:47570183-47570202 | None:intergenic | 50.0% |
| !! | AAAAGGTGCTCTCTTGCGGA+TGG | - | chr2.2:47570474-47570493 | None:intergenic | 50.0% |
| !! | GGCATTGATCGTCGGTTTGA+AGG | + | chr2.2:47569351-47569370 | MS.gene068240:intron | 50.0% |
| !!! | CAGCACTGGTTTTCACGTCT+CGG | + | chr2.2:47571090-47571109 | MS.gene068240:intron | 50.0% |
| !!! | GGAGGTAGTTTTGTAGCACC+AGG | + | chr2.2:47572203-47572222 | MS.gene068240:intron | 50.0% |
| AATGCGAAAGCAGGTGGTGC+AGG | + | chr2.2:47569141-47569160 | MS.gene068240:CDS | 55.0% | |
| ACGAGGGAGCGAAAGAGTTC+AGG | - | chr2.2:47570445-47570464 | None:intergenic | 55.0% | |
| ACTCAGAGACTTCCCGGACT+TGG | - | chr2.2:47572578-47572597 | None:intergenic | 55.0% | |
| CTCGACACACTCCCTCCTAT+TGG | + | chr2.2:47573144-47573163 | MS.gene068240:intron | 55.0% | |
| GACAATGTCATGCCTGTGGC+TGG | - | chr2.2:47573730-47573749 | None:intergenic | 55.0% | |
| GTATGAGGTTGGGGGTCCAA+AGG | + | chr2.2:47572313-47572332 | MS.gene068240:CDS | 55.0% | |
| GTGCCGTGTAACCCGTGTTA+TGG | + | chr2.2:47570901-47570920 | MS.gene068240:intron | 55.0% | |
| GTTGCATCAGGAGCAGCTTC+AGG | + | chr2.2:47572278-47572297 | MS.gene068240:CDS | 55.0% | |
| TGGCAGCTGCACCAAATGCA+AGG | - | chr2.2:47573696-47573715 | None:intergenic | 55.0% | |
| TGGGGTGGAAGTTGAGGTAG+GGG | + | chr2.2:47572355-47572374 | MS.gene068240:intron | 55.0% | |
| TTCCCTAGGTGTGTCGAGTC+AGG | + | chr2.2:47572007-47572026 | MS.gene068240:intron | 55.0% | |
| ! | ACACCTGACTCGACACACCT+AGG | - | chr2.2:47572013-47572032 | None:intergenic | 55.0% |
| ! | CACCTGACTCGACACACCTA+GGG | - | chr2.2:47572012-47572031 | None:intergenic | 55.0% |
| !! | ATTTGGTGCAGCTGCCAGCA+TGG | + | chr2.2:47573699-47573718 | MS.gene068240:CDS | 55.0% |
| AGCATGGTGCATCCAGCCAC+AGG | + | chr2.2:47573715-47573734 | MS.gene068240:CDS | 60.0% | |
| GCAGCTAGAGCAAGACCAGC+AGG | - | chr2.2:47571282-47571301 | None:intergenic | 60.0% | |
| GGGGTGGAAGTTGAGGTAGG+GGG | + | chr2.2:47572356-47572375 | MS.gene068240:intron | 60.0% | |
| TGGAAGTTGAGGTAGGGGGC+TGG | + | chr2.2:47572360-47572379 | MS.gene068240:intron | 60.0% | |
| TGTGGCTGGATGCACCATGC+TGG | - | chr2.2:47573716-47573735 | None:intergenic | 60.0% | |
| !! | GAGGTAGGGGGCTGGCTCTT+GGG | + | chr2.2:47572368-47572387 | MS.gene068240:intron | 65.0% |
| !! | TGAGGTAGGGGGCTGGCTCT+TGG | + | chr2.2:47572367-47572386 | MS.gene068240:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 47569000 | 47573780 | 47569000 | ID=MS.gene068240 |
| chr2.2 | mRNA | 47569000 | 47573780 | 47569000 | ID=MS.gene068240.t1;Parent=MS.gene068240 |
| chr2.2 | exon | 47569000 | 47569299 | 47569000 | ID=MS.gene068240.t1.exon1;Parent=MS.gene068240.t1 |
| chr2.2 | CDS | 47569000 | 47569299 | 47569000 | ID=cds.MS.gene068240.t1;Parent=MS.gene068240.t1 |
| chr2.2 | exon | 47571222 | 47571393 | 47571222 | ID=MS.gene068240.t1.exon2;Parent=MS.gene068240.t1 |
| chr2.2 | CDS | 47571222 | 47571393 | 47571222 | ID=cds.MS.gene068240.t1;Parent=MS.gene068240.t1 |
| chr2.2 | exon | 47571768 | 47571903 | 47571768 | ID=MS.gene068240.t1.exon3;Parent=MS.gene068240.t1 |
| chr2.2 | CDS | 47571768 | 47571903 | 47571768 | ID=cds.MS.gene068240.t1;Parent=MS.gene068240.t1 |
| chr2.2 | exon | 47572015 | 47572125 | 47572015 | ID=MS.gene068240.t1.exon4;Parent=MS.gene068240.t1 |
| chr2.2 | CDS | 47572015 | 47572125 | 47572015 | ID=cds.MS.gene068240.t1;Parent=MS.gene068240.t1 |
| chr2.2 | exon | 47572268 | 47572370 | 47572268 | ID=MS.gene068240.t1.exon5;Parent=MS.gene068240.t1 |
| chr2.2 | CDS | 47572268 | 47572370 | 47572268 | ID=cds.MS.gene068240.t1;Parent=MS.gene068240.t1 |
| chr2.2 | exon | 47572737 | 47572880 | 47572737 | ID=MS.gene068240.t1.exon6;Parent=MS.gene068240.t1 |
| chr2.2 | CDS | 47572737 | 47572880 | 47572737 | ID=cds.MS.gene068240.t1;Parent=MS.gene068240.t1 |
| chr2.2 | exon | 47572964 | 47573071 | 47572964 | ID=MS.gene068240.t1.exon7;Parent=MS.gene068240.t1 |
| chr2.2 | CDS | 47572964 | 47573071 | 47572964 | ID=cds.MS.gene068240.t1;Parent=MS.gene068240.t1 |
| chr2.2 | exon | 47573640 | 47573780 | 47573640 | ID=MS.gene068240.t1.exon8;Parent=MS.gene068240.t1 |
| chr2.2 | CDS | 47573640 | 47573780 | 47573640 | ID=cds.MS.gene068240.t1;Parent=MS.gene068240.t1 |
| Gene Sequence |
| Protein sequence |
