Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069932.t1 | XP_013455569.1 | 98.3 | 290 | 4 | 1 | 1 | 289 | 1 | 290 | 8.90E-147 | 529.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069932.t1 | Q7XAB8 | 72.4 | 290 | 72 | 5 | 1 | 289 | 1 | 283 | 1.2e-104 | 380.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069932.t1 | A0A072UUQ2 | 98.3 | 290 | 4 | 1 | 1 | 289 | 1 | 290 | 6.4e-147 | 529.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene069932 | 0.800424 | 1.45E-48 | -1.69E-46 |
| MS.gene049222 | MS.gene069932 | 0.823409 | 1.41E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene069932 | 0.805354 | 1.39E-49 | -1.69E-46 |
| MS.gene049320 | MS.gene069932 | 0.822672 | 2.09E-53 | -1.69E-46 |
| MS.gene049427 | MS.gene069932 | 0.859838 | 3.14E-63 | -1.69E-46 |
| MS.gene049609 | MS.gene069932 | 0.810982 | 8.79E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene069932 | 0.848801 | 4.86E-60 | -1.69E-46 |
| MS.gene050165 | MS.gene069932 | 0.819289 | 1.26E-52 | -1.69E-46 |
| MS.gene050518 | MS.gene069932 | 0.817935 | 2.55E-52 | -1.69E-46 |
| MS.gene050538 | MS.gene069932 | 0.80018 | 1.63E-48 | -1.69E-46 |
| MS.gene050593 | MS.gene069932 | 0.804887 | 1.74E-49 | -1.69E-46 |
| MS.gene050675 | MS.gene069932 | 0.816196 | 6.26E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene069932 | 0.833058 | 6.63E-56 | -1.69E-46 |
| MS.gene050747 | MS.gene069932 | 0.838446 | 2.86E-57 | -1.69E-46 |
| MS.gene050772 | MS.gene069932 | 0.817104 | 3.92E-52 | -1.69E-46 |
| MS.gene050781 | MS.gene069932 | 0.831163 | 1.95E-55 | -1.69E-46 |
| MS.gene050783 | MS.gene069932 | 0.822331 | 2.51E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene069932 | 0.856773 | 2.56E-62 | -1.69E-46 |
| MS.gene050986 | MS.gene069932 | 0.804547 | 2.05E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene069932 | 0.803299 | 3.72E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene069932 | 0.833486 | 5.19E-56 | -1.69E-46 |
| MS.gene051694 | MS.gene069932 | 0.816919 | 4.31E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene069932 | 0.814772 | 1.30E-51 | -1.69E-46 |
| MS.gene052271 | MS.gene069932 | 0.809036 | 2.31E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene069932 | 0.818034 | 2.42E-52 | -1.69E-46 |
| MS.gene052615 | MS.gene069932 | 0.840376 | 9.03E-58 | -1.69E-46 |
| MS.gene053107 | MS.gene069932 | 0.827393 | 1.60E-54 | -1.69E-46 |
| MS.gene053207 | MS.gene069932 | 0.815736 | 7.93E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene069932 | 0.859517 | 3.92E-63 | -1.69E-46 |
| MS.gene053286 | MS.gene069932 | 0.854869 | 9.23E-62 | -1.69E-46 |
| MS.gene053322 | MS.gene069932 | 0.839279 | 1.74E-57 | -1.69E-46 |
| MS.gene053574 | MS.gene069932 | 0.815088 | 1.11E-51 | -1.69E-46 |
| MS.gene053579 | MS.gene069932 | 0.816498 | 5.36E-52 | -1.69E-46 |
| MS.gene054376 | MS.gene069932 | 0.807836 | 4.16E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene069932 | 0.800914 | 1.15E-48 | -1.69E-46 |
| MS.gene054642 | MS.gene069932 | 0.828145 | 1.06E-54 | -1.69E-46 |
| MS.gene054802 | MS.gene069932 | 0.827677 | 1.37E-54 | -1.69E-46 |
| MS.gene054803 | MS.gene069932 | 0.830578 | 2.71E-55 | -1.69E-46 |
| MS.gene054804 | MS.gene069932 | 0.828734 | 7.63E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene069932 | 0.802867 | 4.58E-49 | -1.69E-46 |
| MS.gene055397 | MS.gene069932 | 0.823609 | 1.26E-53 | -1.69E-46 |
| MS.gene055412 | MS.gene069932 | 0.809119 | 2.21E-50 | -1.69E-46 |
| MS.gene055499 | MS.gene069932 | 0.872542 | 2.94E-67 | -1.69E-46 |
| MS.gene055502 | MS.gene069932 | 0.806935 | 6.46E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene069932 | 0.838786 | 2.34E-57 | -1.69E-46 |
| MS.gene056083 | MS.gene069932 | 0.827637 | 1.40E-54 | -1.69E-46 |
| MS.gene056374 | MS.gene069932 | 0.812922 | 3.32E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene069932 | 0.825825 | 3.80E-54 | -1.69E-46 |
| MS.gene056692 | MS.gene069932 | 0.804418 | 2.18E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene069932 | 0.85756 | 1.50E-62 | -1.69E-46 |
| MS.gene057129 | MS.gene069932 | 0.81534 | 9.72E-52 | -1.69E-46 |
| MS.gene057146 | MS.gene069932 | 0.839554 | 1.48E-57 | -1.69E-46 |
| MS.gene057331 | MS.gene069932 | 0.814239 | 1.70E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene069932 | 0.841295 | 5.18E-58 | -1.69E-46 |
| MS.gene057831 | MS.gene069932 | 0.824573 | 7.50E-54 | -1.69E-46 |
| MS.gene058019 | MS.gene069932 | 0.804036 | 2.62E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene069932 | 0.818003 | 2.46E-52 | -1.69E-46 |
| MS.gene058323 | MS.gene069932 | 0.810556 | 1.09E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene069932 | 0.807559 | 4.76E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene069932 | 0.82297 | 1.78E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene069932 | 0.814199 | 1.74E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene069932 | 0.806312 | 8.75E-50 | -1.69E-46 |
| MS.gene05883 | MS.gene069932 | 0.886188 | 4.25E-72 | -1.69E-46 |
| MS.gene059029 | MS.gene069932 | 0.818443 | 1.96E-52 | -1.69E-46 |
| MS.gene059536 | MS.gene069932 | 0.825763 | 3.93E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene069932 | 0.817134 | 3.86E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene069932 | 0.836078 | 1.16E-56 | -1.69E-46 |
| MS.gene059756 | MS.gene069932 | 0.805002 | 1.65E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene069932 | 0.845848 | 3.14E-59 | -1.69E-46 |
| MS.gene060804 | MS.gene069932 | 0.801348 | 9.39E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene069932 | 0.816239 | 6.13E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene069932 | 0.831758 | 1.39E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene069932 | 0.835051 | 2.10E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene069932 | MS.gene052115 | PPI |
| MS.gene24695 | MS.gene069932 | PPI |
| MS.gene069932 | MS.gene45498 | PPI |
| MS.gene006258 | MS.gene069932 | PPI |
| MS.gene069932 | MS.gene31148 | PPI |
| MS.gene069932 | MS.gene007198 | PPI |
| MS.gene069932 | MS.gene24730 | PPI |
| MS.gene069932 | MS.gene49126 | PPI |
| MS.gene069932 | MS.gene30964 | PPI |
| MS.gene061150 | MS.gene069932 | PPI |
| MS.gene069932 | MS.gene30963 | PPI |
| MS.gene050301 | MS.gene069932 | PPI |
| MS.gene069932 | MS.gene052116 | PPI |
| MS.gene069932 | MS.gene34133 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069932.t1 | MTR_4g045980 | 98.276 | 290 | 4 | 1 | 1 | 289 | 1 | 290 | 0.0 | 575 |
| MS.gene069932.t1 | MTR_2g089795 | 76.042 | 288 | 67 | 2 | 1 | 288 | 1 | 286 | 6.47e-159 | 444 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069932.t1 | AT2G20890 | 69.204 | 289 | 80 | 4 | 2 | 289 | 3 | 283 | 1.66e-139 | 395 |
Find 65 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATGGAACCAACAATTT+TGG | 0.156594 | 4.1:-53447709 | MS.gene069932:CDS |
| CTTTCTTCCACTCGCTTCTT+TGG | 0.224844 | 4.1:-53450917 | MS.gene069932:CDS |
| AGAAGTTGAGGGGACTTTAA+AGG | 0.233722 | 4.1:-53447820 | MS.gene069932:CDS |
| TTCCAATTCGGGTTCCAAAT+TGG | 0.290486 | 4.1:-53450831 | MS.gene069932:CDS |
| GGAACACCGAACAACCAATT+TGG | 0.320518 | 4.1:+53450817 | None:intergenic |
| CGGTGTTCCTCTTCTGTGTC+AGG | 0.335981 | 4.1:-53450803 | MS.gene069932:intron |
| AACCAATTTGGAACCCGAAT+TGG | 0.341244 | 4.1:+53450829 | None:intergenic |
| ACACTCATTCTAACCTGTAT+TGG | 0.353763 | 4.1:+53448592 | None:intergenic |
| CTCTAGATGAAAACTCAATC+AGG | 0.355791 | 4.1:+53447847 | None:intergenic |
| GGAGTTCGATCTTCCAATTC+GGG | 0.358649 | 4.1:-53450842 | MS.gene069932:CDS |
| CTAACTCAAGAAGACGAAAA+AGG | 0.366194 | 4.1:+53447736 | None:intergenic |
| GCAGAAAGAGCAGGTGGAAA+TGG | 0.366441 | 4.1:-53447792 | MS.gene069932:CDS |
| CGGGTTCCAAATTGGTTGTT+CGG | 0.373368 | 4.1:-53450823 | MS.gene069932:CDS |
| TATGATCCTGTATTTGCTCT+TGG | 0.383099 | 4.1:-53448717 | MS.gene069932:CDS |
| GTCAATTCAACAGCTTTGTT+CGG | 0.391152 | 4.1:-53447161 | MS.gene069932:intron |
| TGGAGTTCGATCTTCCAATT+CGG | 0.398708 | 4.1:-53450843 | MS.gene069932:CDS |
| CACTCATTCTAACCTGTATT+GGG | 0.405031 | 4.1:+53448593 | None:intergenic |
| TGTATCTCATCAGATGTTGC+TGG | 0.405952 | 4.1:+53448754 | None:intergenic |
| CAGAAAGAGCAGGTGGAAAT+GGG | 0.407573 | 4.1:-53447791 | MS.gene069932:CDS |
| TCGCAATCTGCTTTCTAAGT+TGG | 0.429863 | 4.1:-53447092 | MS.gene069932:CDS |
| AGCATATCTTTGCGCTATGT+TGG | 0.431929 | 4.1:-53450863 | MS.gene069932:CDS |
| GAAGAAGAAAATAGAAGAAA+GGG | 0.446296 | 4.1:-53446523 | MS.gene069932:CDS |
| AGAAGAAGAAAATAGAAGAA+AGG | 0.447419 | 4.1:-53446524 | MS.gene069932:CDS |
| TATCTACAACTCTGTGCTAC+AGG | 0.458194 | 4.1:-53448787 | MS.gene069932:CDS |
| AGCATACATTAACGCATTGA+AGG | 0.462951 | 4.1:-53448625 | MS.gene069932:CDS |
| AGGAAGATCCAGCCCAATAC+AGG | 0.469089 | 4.1:-53448605 | MS.gene069932:intron |
| GTTCCGATTCAGATGCAGTT+CGG | 0.478573 | 4.1:-53450895 | MS.gene069932:CDS |
| AGAAAGGGCTGAACCACAAA+AGG | 0.489128 | 4.1:-53446508 | MS.gene069932:CDS |
| AAACCGAACTGCATCTGAAT+CGG | 0.490474 | 4.1:+53450892 | None:intergenic |
| CATTCTAACCTGTATTGGGC+TGG | 0.493657 | 4.1:+53448597 | None:intergenic |
| TGCTAAAGGAATACATTGAC+AGG | 0.497269 | 4.1:-53447054 | MS.gene069932:intron |
| TGCACAGAAGTTAGAAGAGT+GGG | 0.505507 | 4.1:-53447892 | MS.gene069932:CDS |
| AACTTTGTCTCAGAAACAGT+TGG | 0.506286 | 4.1:+53448846 | None:intergenic |
| TATAGTCGTTTCTTTGCAGT+TGG | 0.508113 | 4.1:-53447759 | MS.gene069932:CDS |
| ATCTAGAGAAGGAGAAGTTG+AGG | 0.517674 | 4.1:-53447832 | MS.gene069932:CDS |
| GAAGAAGTTACGGCGGCCAT+CGG | 0.519226 | 4.1:+53450989 | None:intergenic |
| TCAATGCGTTAATGTATGCT+TGG | 0.520925 | 4.1:+53448628 | None:intergenic |
| AAGGATATTGCAGAAAGAGC+AGG | 0.525042 | 4.1:-53447801 | MS.gene069932:CDS |
| ACAAAGCCAAGAGCAAATAC+AGG | 0.548987 | 4.1:+53448711 | None:intergenic |
| TCTAGAGAAGGAGAAGTTGA+GGG | 0.549571 | 4.1:-53447831 | MS.gene069932:CDS |
| TGAACCACAAAAGGCTAATG+AGG | 0.552905 | 4.1:-53446499 | MS.gene069932:CDS |
| ACAAGCTAAAGAGCTGCTAA+AGG | 0.557940 | 4.1:-53447068 | MS.gene069932:CDS |
| TTTCAAACCTGACACAGAAG+AGG | 0.562747 | 4.1:+53450796 | None:intergenic |
| CACTGTATATGACCAACTCA+TGG | 0.564562 | 4.1:-53448688 | MS.gene069932:CDS |
| TAGGATACCCTTCCATGAGT+TGG | 0.569068 | 4.1:+53448676 | None:intergenic |
| GTATATGACCAACTCATGGA+AGG | 0.575651 | 4.1:-53448684 | MS.gene069932:CDS |
| TCTTGAGTTAGCAAATGCAA+TGG | 0.577069 | 4.1:-53447724 | MS.gene069932:CDS |
| GAATGAGAAAGAAGAAGTTA+CGG | 0.577141 | 4.1:+53450979 | None:intergenic |
| TCTAGATGAAAACTCAATCA+GGG | 0.581656 | 4.1:+53447848 | None:intergenic |
| AGCACAGAGTTGTAGATACT+AGG | 0.593993 | 4.1:+53448792 | None:intergenic |
| TTTGTCTCAGAAACAGTTGG+AGG | 0.595131 | 4.1:+53448849 | None:intergenic |
| GCATCTCTATCCTCATCACT+AGG | 0.603750 | 4.1:+53448657 | None:intergenic |
| TTGTCTCAGAAACAGTTGGA+GGG | 0.613813 | 4.1:+53448850 | None:intergenic |
| ATGCACAGAAGTTAGAAGAG+TGG | 0.618365 | 4.1:-53447893 | MS.gene069932:CDS |
| GTTAATGTATGCTTGGAAGA+TGG | 0.618779 | 4.1:+53448635 | None:intergenic |
| GAGCAAATACAGGATCATAA+CGG | 0.626380 | 4.1:+53448721 | None:intergenic |
| GAGTTGTAGATACTAGGTAT+CGG | 0.630185 | 4.1:+53448798 | None:intergenic |
| ATCGGAACCAAAGAAGCGAG+TGG | 0.641210 | 4.1:+53450910 | None:intergenic |
| GATATTGCAGAAAGAGCAGG+TGG | 0.641882 | 4.1:-53447798 | MS.gene069932:CDS |
| TATATGACCAACTCATGGAA+GGG | 0.644279 | 4.1:-53448683 | MS.gene069932:CDS |
| AGAAAGAGCAGGTGGAAATG+GGG | 0.649638 | 4.1:-53447790 | MS.gene069932:CDS |
| CTAGAGAAGGAGAAGTTGAG+GGG | 0.650582 | 4.1:-53447830 | MS.gene069932:CDS |
| CACTCACTCAATCTTCTCAG+AGG | 0.654132 | 4.1:-53450952 | MS.gene069932:CDS |
| GGAAGGGTATCCTAGTGATG+AGG | 0.675183 | 4.1:-53448667 | MS.gene069932:CDS |
| TGAGAAAGAAGAAGTTACGG+CGG | 0.721704 | 4.1:+53450982 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAGTAAAAATTATAAATAA+AGG | + | chr4.1:53447435-53447454 | None:intergenic | 10.0% |
| !! | ATTCAAATATTATATATCAT+AGG | + | chr4.1:53450497-53450516 | None:intergenic | 10.0% |
| !! | CAGTAAAAATTATAAATAAA+GGG | + | chr4.1:53447434-53447453 | None:intergenic | 10.0% |
| !!! | TCAATTTTCAATATAAATAA+AGG | + | chr4.1:53450055-53450074 | None:intergenic | 10.0% |
| !! | ATTTATTCAAAATCAAATCT+AGG | + | chr4.1:53449497-53449516 | None:intergenic | 15.0% |
| !! | CATATTATTATCTTGATAAA+AGG | + | chr4.1:53448465-53448484 | None:intergenic | 15.0% |
| !! | TTAATTAATTAAAGTGACAA+AGG | + | chr4.1:53448077-53448096 | None:intergenic | 15.0% |
| !!! | AAACTACTTTTTAGTATATA+TGG | - | chr4.1:53449349-53449368 | MS.gene069932:intron | 15.0% |
| !!! | AACTTTTTTAAACAAAAAGT+TGG | + | chr4.1:53448119-53448138 | None:intergenic | 15.0% |
| !!! | ACTTTTTTAAACAAAAAGTT+GGG | + | chr4.1:53448118-53448137 | None:intergenic | 15.0% |
| !!! | ATGTTTTAATTGGAAATATA+TGG | - | chr4.1:53446795-53446814 | MS.gene069932:intron | 15.0% |
| !!! | TTAGAATTTGATGTTTTAAT+TGG | - | chr4.1:53446785-53446804 | MS.gene069932:intron | 15.0% |
| !! | AACTCAATGATTGAATATAA+TGG | - | chr4.1:53448953-53448972 | MS.gene069932:intron | 20.0% |
| !! | AATAATCTAATTCTGGATTT+AGG | - | chr4.1:53449013-53449032 | MS.gene069932:intron | 20.0% |
| !! | ATAATCTAATTCTGGATTTA+GGG | - | chr4.1:53449014-53449033 | MS.gene069932:intron | 20.0% |
| !! | TAAATCCAGAATTAGATTAT+TGG | + | chr4.1:53449014-53449033 | None:intergenic | 20.0% |
| !! | TTATGTATTATGTGTATGTT+TGG | + | chr4.1:53447236-53447255 | None:intergenic | 20.0% |
| !!! | AAAGGTTATTTCGAAAATAA+TGG | + | chr4.1:53450756-53450775 | None:intergenic | 20.0% |
| !!! | AAATATTTTATAGAGGATGA+TGG | - | chr4.1:53449187-53449206 | MS.gene069932:intron | 20.0% |
| !!! | ACTATAGTATTTTCTGATAA+AGG | + | chr4.1:53450774-53450793 | None:intergenic | 20.0% |
| !!! | ATTTTGAAGTTTTGTTTATG+AGG | - | chr4.1:53446838-53446857 | MS.gene069932:intron | 20.0% |
| !!! | GATTTTAGATTGATATTTAC+AGG | + | chr4.1:53448309-53448328 | None:intergenic | 20.0% |
| !!! | TTGAATTGATTCTGTAAAAT+TGG | - | chr4.1:53447005-53447024 | MS.gene069932:intron | 20.0% |
| !!! | TTTACTTGATATTTTTGGAT+TGG | - | chr4.1:53447753-53447772 | MS.gene069932:CDS | 20.0% |
| !!! | TTTTTATTTCTTTTCCCTTT+TGG | + | chr4.1:53448541-53448560 | None:intergenic | 20.0% |
| ! | AAACTGAAGAACTTAGTAAA+TGG | + | chr4.1:53450719-53450738 | None:intergenic | 25.0% |
| ! | AACTGAAGAACTTAGTAAAT+GGG | + | chr4.1:53450718-53450737 | None:intergenic | 25.0% |
| ! | AAGGTAAAAGTGATTTATGT+TGG | - | chr4.1:53447048-53447067 | MS.gene069932:intron | 25.0% |
| ! | AATTTGGATTCAAAGATCAT+TGG | + | chr4.1:53447294-53447313 | None:intergenic | 25.0% |
| ! | AGAAGAAGAAAATAGAAGAA+AGG | - | chr4.1:53450947-53450966 | MS.gene069932:CDS | 25.0% |
| ! | AGGTAAAAGTGATTTATGTT+GGG | - | chr4.1:53447049-53447068 | MS.gene069932:intron | 25.0% |
| ! | ATGTAAGACAAAGAATTCAT+AGG | + | chr4.1:53449524-53449543 | None:intergenic | 25.0% |
| ! | ATTTACAGGAATATTTCTCA+GGG | + | chr4.1:53448295-53448314 | None:intergenic | 25.0% |
| ! | CAAAACACTTTGATTATGTT+TGG | - | chr4.1:53446955-53446974 | MS.gene069932:intron | 25.0% |
| ! | CAAGAACTAATAATTTAAGC+AGG | + | chr4.1:53449229-53449248 | None:intergenic | 25.0% |
| ! | CATCAACTATTATTTATGTG+CGG | + | chr4.1:53447534-53447553 | None:intergenic | 25.0% |
| ! | CATGACAACTTAAATGAATT+GGG | + | chr4.1:53449797-53449816 | None:intergenic | 25.0% |
| ! | CTATAAAATATTTGAGCAAC+TGG | + | chr4.1:53449180-53449199 | None:intergenic | 25.0% |
| ! | CTTCTAATTGAAAATTAAGC+TGG | - | chr4.1:53450689-53450708 | MS.gene069932:intron | 25.0% |
| ! | GAAGAAGAAAATAGAAGAAA+GGG | - | chr4.1:53450948-53450967 | MS.gene069932:CDS | 25.0% |
| ! | GAAGTATGAATTTGCAATTT+AGG | + | chr4.1:53448519-53448538 | None:intergenic | 25.0% |
| ! | GTTATACATGTCGAAAATTT+AGG | + | chr4.1:53450872-53450891 | None:intergenic | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | + | chr4.1:53447596-53447615 | None:intergenic | 25.0% |
| ! | TAATCTAATTCTGGATTTAG+GGG | - | chr4.1:53449015-53449034 | MS.gene069932:intron | 25.0% |
| ! | TATTTACAGGAATATTTCTC+AGG | + | chr4.1:53448296-53448315 | None:intergenic | 25.0% |
| ! | TCAACAAGTAGAATCAATTT+AGG | - | chr4.1:53447140-53447159 | MS.gene069932:CDS | 25.0% |
| ! | TCACAAATCATAAAATCATG+TGG | + | chr4.1:53449120-53449139 | None:intergenic | 25.0% |
| ! | TCATGACAACTTAAATGAAT+TGG | + | chr4.1:53449798-53449817 | None:intergenic | 25.0% |
| ! | TTACTAAGTTCTTCAGTTTA+GGG | - | chr4.1:53450720-53450739 | MS.gene069932:intron | 25.0% |
| ! | TTGTTATCAATACTTAGTCA+TGG | - | chr4.1:53448574-53448593 | MS.gene069932:intron | 25.0% |
| ! | TTTACTAAGTTCTTCAGTTT+AGG | - | chr4.1:53450719-53450738 | MS.gene069932:intron | 25.0% |
| !! | AAAATTGATTCTGACATGTT+TGG | + | chr4.1:53447194-53447213 | None:intergenic | 25.0% |
| !! | CACATAAATAATAGTTGATG+TGG | - | chr4.1:53447534-53447553 | MS.gene069932:intron | 25.0% |
| !! | CTGCATTTACTTGATATTTT+TGG | - | chr4.1:53447748-53447767 | MS.gene069932:CDS | 25.0% |
| !! | GACAAAGTTAAATTTTCTCA+AGG | - | chr4.1:53448639-53448658 | MS.gene069932:CDS | 25.0% |
| !! | GTGATCTCAATTTTATGAAA+AGG | + | chr4.1:53450629-53450648 | None:intergenic | 25.0% |
| !! | GTTGCTCAAATATTTTATAG+AGG | - | chr4.1:53449180-53449199 | MS.gene069932:intron | 25.0% |
| !! | TGTCAGGTTTGAAATAAAAA+AGG | - | chr4.1:53446684-53446703 | MS.gene069932:intron | 25.0% |
| !! | TGTTGTAATTGGAAGTATAA+CGG | - | chr4.1:53449274-53449293 | MS.gene069932:intron | 25.0% |
| !! | TTGTTCTTGAACTATCTTTT+AGG | - | chr4.1:53447971-53447990 | MS.gene069932:intron | 25.0% |
| !!! | AAATAAGTATTGGAGTAAGT+TGG | + | chr4.1:53449831-53449850 | None:intergenic | 25.0% |
| !!! | AATAAGTATTGGAGTAAGTT+GGG | + | chr4.1:53449830-53449849 | None:intergenic | 25.0% |
| !!! | AATGATTAGTTTTCTAGAAC+TGG | + | chr4.1:53449912-53449931 | None:intergenic | 25.0% |
| !!! | ATGACTAAGTATTGATAACA+AGG | + | chr4.1:53448575-53448594 | None:intergenic | 25.0% |
| !!! | TATGATTTGTGAATCACTTT+TGG | - | chr4.1:53449128-53449147 | MS.gene069932:intron | 25.0% |
| !!! | TTTTTGAGAACTTGAGAATT+GGG | - | chr4.1:53446741-53446760 | MS.gene069932:intron | 25.0% |
| !!! | TTTTTTGAGAACTTGAGAAT+TGG | - | chr4.1:53446740-53446759 | MS.gene069932:intron | 25.0% |
| AACAACTTAATAGCATTGCA+AGG | + | chr4.1:53450453-53450472 | None:intergenic | 30.0% | |
| AATATAATCAGCAGGTGATA+CGG | - | chr4.1:53448365-53448384 | MS.gene069932:intron | 30.0% | |
| ACAAGTAGAATCAATTTAGG+AGG | - | chr4.1:53447143-53447162 | MS.gene069932:CDS | 30.0% | |
| AGATTCAATCTTGAACATCA+AGG | + | chr4.1:53450593-53450612 | None:intergenic | 30.0% | |
| AGCAGAAAAGCTTATAAAAG+TGG | - | chr4.1:53447906-53447925 | MS.gene069932:intron | 30.0% | |
| ATATGACTATCATCAGACTA+TGG | - | chr4.1:53450199-53450218 | MS.gene069932:intron | 30.0% | |
| ATCAGTGAAACTGTAGAATA+AGG | + | chr4.1:53448176-53448195 | None:intergenic | 30.0% | |
| CTTAAAATGTGGCAAACAAA+AGG | + | chr4.1:53447833-53447852 | None:intergenic | 30.0% | |
| CTTCCAATTACAACATTATC+AGG | + | chr4.1:53449269-53449288 | None:intergenic | 30.0% | |
| GAATGAGAAAGAAGAAGTTA+CGG | + | chr4.1:53446495-53446514 | None:intergenic | 30.0% | |
| GAATTACTCAGTAACTTTGA+AGG | - | chr4.1:53450105-53450124 | MS.gene069932:intron | 30.0% | |
| GATTCAATCTTGAACATCAA+GGG | + | chr4.1:53450592-53450611 | None:intergenic | 30.0% | |
| GCAAATTCATACTTCCAAAA+GGG | - | chr4.1:53448524-53448543 | MS.gene069932:intron | 30.0% | |
| GCTAAAATAGAACACTTTAG+AGG | - | chr4.1:53447556-53447575 | MS.gene069932:intron | 30.0% | |
| GTGGTTTAAATATAATCAGC+AGG | - | chr4.1:53448357-53448376 | MS.gene069932:intron | 30.0% | |
| GTGTTATCAATCTCAGATAA+CGG | - | chr4.1:53447350-53447369 | MS.gene069932:intron | 30.0% | |
| TAAGAACTGACACATTAATG+CGG | - | chr4.1:53446894-53446913 | MS.gene069932:intron | 30.0% | |
| TCTAGATGAAAACTCAATCA+GGG | + | chr4.1:53449626-53449645 | None:intergenic | 30.0% | |
| TCTCACCAATAATCTAATTC+TGG | - | chr4.1:53449006-53449025 | MS.gene069932:intron | 30.0% | |
| TGAAGACTTAATGTAGCATA+TGG | + | chr4.1:53450545-53450564 | None:intergenic | 30.0% | |
| TGCAAATTCATACTTCCAAA+AGG | - | chr4.1:53448523-53448542 | MS.gene069932:intron | 30.0% | |
| TTAAACAAAAAGTTGGGCAA+GGG | + | chr4.1:53448112-53448131 | None:intergenic | 30.0% | |
| TTTAAACAAAAAGTTGGGCA+AGG | + | chr4.1:53448113-53448132 | None:intergenic | 30.0% | |
| ! | AAAATACACTGGCCTATATA+GGG | - | chr4.1:53447863-53447882 | MS.gene069932:CDS | 30.0% |
| ! | ATTGAGTTTTCATCTAGAGA+AGG | - | chr4.1:53449628-53449647 | MS.gene069932:intron | 30.0% |
| ! | CATGTCGAAAATTTAGGTTA+AGG | + | chr4.1:53450866-53450885 | None:intergenic | 30.0% |
| ! | GTAACCTTTTCCAAAATTGT+TGG | + | chr4.1:53449775-53449794 | None:intergenic | 30.0% |
| ! | GTATCAATCCACAGAATTTT+GGG | + | chr4.1:53448257-53448276 | None:intergenic | 30.0% |
| ! | GTTCCTGATAATGTTGTAAT+TGG | - | chr4.1:53449263-53449282 | MS.gene069932:intron | 30.0% |
| ! | TAAAATACACTGGCCTATAT+AGG | - | chr4.1:53447862-53447881 | MS.gene069932:CDS | 30.0% |
| ! | TAACGAAATAAGTTGGCAAT+AGG | + | chr4.1:53449950-53449969 | None:intergenic | 30.0% |
| ! | TATAGGCCAGTGTATTTTAT+TGG | + | chr4.1:53447861-53447880 | None:intergenic | 30.0% |
| ! | TATCAATCCACAGAATTTTG+GGG | + | chr4.1:53448256-53448275 | None:intergenic | 30.0% |
| ! | TATTGGAGCATCTTAAAATG+TGG | + | chr4.1:53447844-53447863 | None:intergenic | 30.0% |
| ! | TGGAATGATCTTTTACTTCA+GGG | - | chr4.1:53450924-53450943 | MS.gene069932:CDS | 30.0% |
| ! | TGGTTTTTGATAGAACACTA+TGG | - | chr4.1:53447600-53447619 | MS.gene069932:intron | 30.0% |
| ! | TTATTTTCCTTGCCCTATAT+AGG | + | chr4.1:53447878-53447897 | None:intergenic | 30.0% |
| ! | TTGGAATGATCTTTTACTTC+AGG | - | chr4.1:53450923-53450942 | MS.gene069932:CDS | 30.0% |
| ! | TTTTGTATGTTTCATGACTC+TGG | + | chr4.1:53449403-53449422 | None:intergenic | 30.0% |
| !! | AAAAAGTGTTGATCGAGATT+TGG | - | chr4.1:53450349-53450368 | MS.gene069932:intron | 30.0% |
| !! | CAATCATTGAGTTGAACATT+TGG | + | chr4.1:53448946-53448965 | None:intergenic | 30.0% |
| !! | GTTGTGAATAGTTCTGAATT+TGG | - | chr4.1:53448491-53448510 | MS.gene069932:intron | 30.0% |
| !! | TTGAGTTGAACATTTGGTAT+AGG | + | chr4.1:53448940-53448959 | None:intergenic | 30.0% |
| !!! | CTGTGGTTTTTGTTTTTAAG+TGG | - | chr4.1:53448912-53448931 | MS.gene069932:intron | 30.0% |
| AACTTTGTCTCAGAAACAGT+TGG | + | chr4.1:53448628-53448647 | None:intergenic | 35.0% | |
| AAGAACACTTAGCGAGATAA+CGG | - | chr4.1:53447391-53447410 | MS.gene069932:intron | 35.0% | |
| AAGCATAAAAGGGAGCAATT+TGG | + | chr4.1:53447310-53447329 | None:intergenic | 35.0% | |
| AATACAAGACAGCACCAATA+TGG | - | chr4.1:53447507-53447526 | MS.gene069932:intron | 35.0% | |
| AATGAGGCCATTTCAAAATG+AGG | - | chr4.1:53450988-53451007 | MS.gene069932:CDS | 35.0% | |
| ACACTCATTCTAACCTGTAT+TGG | + | chr4.1:53448882-53448901 | None:intergenic | 35.0% | |
| AGATGATTTAACACAGTCTG+CGG | + | chr4.1:53448989-53449008 | None:intergenic | 35.0% | |
| AGCATACATTAACGCATTGA+AGG | - | chr4.1:53448846-53448865 | MS.gene069932:CDS | 35.0% | |
| AGTGCAAGTATCATTGTCTT+TGG | - | chr4.1:53449456-53449475 | MS.gene069932:intron | 35.0% | |
| ATGAGGCCATTTCAAAATGA+GGG | - | chr4.1:53450989-53451008 | MS.gene069932:CDS | 35.0% | |
| ATTCATCGGTAACAAATTGC+TGG | - | chr4.1:53450138-53450157 | MS.gene069932:intron | 35.0% | |
| CACTCATTCTAACCTGTATT+GGG | + | chr4.1:53448881-53448900 | None:intergenic | 35.0% | |
| CTAACTCAAGAAGACGAAAA+AGG | + | chr4.1:53449738-53449757 | None:intergenic | 35.0% | |
| CTAGTGATATACTGAGAACT+TGG | - | chr4.1:53450801-53450820 | MS.gene069932:intron | 35.0% | |
| CTCTAGATGAAAACTCAATC+AGG | + | chr4.1:53449627-53449646 | None:intergenic | 35.0% | |
| CTTCAGCTAACGAAATAAGT+TGG | + | chr4.1:53449957-53449976 | None:intergenic | 35.0% | |
| GAGCAAATACAGGATCATAA+CGG | + | chr4.1:53448753-53448772 | None:intergenic | 35.0% | |
| GAGTTGTAGATACTAGGTAT+CGG | + | chr4.1:53448676-53448695 | None:intergenic | 35.0% | |
| GATGCTCCAATAAAATACAC+TGG | - | chr4.1:53447852-53447871 | MS.gene069932:CDS | 35.0% | |
| GTTAATGTATGCTTGGAAGA+TGG | + | chr4.1:53448839-53448858 | None:intergenic | 35.0% | |
| TAAAATGCACAAGAGGAACT+TGG | - | chr4.1:53447780-53447799 | MS.gene069932:CDS | 35.0% | |
| TAAACAAAAAGTTGGGCAAG+GGG | + | chr4.1:53448111-53448130 | None:intergenic | 35.0% | |
| TATAGTCGTTTCTTTGCAGT+TGG | - | chr4.1:53449712-53449731 | MS.gene069932:intron | 35.0% | |
| TATATGACCAACTCATGGAA+GGG | - | chr4.1:53448788-53448807 | MS.gene069932:CDS | 35.0% | |
| TATGATCCTGTATTTGCTCT+TGG | - | chr4.1:53448754-53448773 | MS.gene069932:CDS | 35.0% | |
| TATTTATGTGCGGTCCATAT+TGG | + | chr4.1:53447524-53447543 | None:intergenic | 35.0% | |
| TCAATGCGTTAATGTATGCT+TGG | + | chr4.1:53448846-53448865 | None:intergenic | 35.0% | |
| TCTTGAGTTAGCAAATGCAA+TGG | - | chr4.1:53449747-53449766 | MS.gene069932:intron | 35.0% | |
| TGAAATAGAACACACATCAC+AGG | - | chr4.1:53447690-53447709 | MS.gene069932:intron | 35.0% | |
| TGCTAAAGGAATACATTGAC+AGG | - | chr4.1:53450417-53450436 | MS.gene069932:intron | 35.0% | |
| ! | AAGTTCCTCTTGTGCATTTT+AGG | + | chr4.1:53447781-53447800 | None:intergenic | 35.0% |
| ! | AATAAGTTGGCAATAGGACT+TGG | + | chr4.1:53449944-53449963 | None:intergenic | 35.0% |
| ! | AATTTTTGCCCCTCTACAAT+TGG | - | chr4.1:53447208-53447227 | MS.gene069932:intron | 35.0% |
| ! | AGTTCTTCAGTTTAGGGTTT+AGG | - | chr4.1:53450726-53450745 | MS.gene069932:intron | 35.0% |
| ! | ATGTTTGGTTCCAATTGTAG+AGG | + | chr4.1:53447221-53447240 | None:intergenic | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr4.1:53447580-53447599 | MS.gene069932:intron | 35.0% |
| ! | GGTATCAATCCACAGAATTT+TGG | + | chr4.1:53448258-53448277 | None:intergenic | 35.0% |
| ! | TGATTCTACTTGTTGAAGCT+CGG | + | chr4.1:53447136-53447155 | None:intergenic | 35.0% |
| ! | TGCAATGGAACCAACAATTT+TGG | - | chr4.1:53449762-53449781 | MS.gene069932:intron | 35.0% |
| ! | TGGTTGTGAAATTTTCGTCT+CGG | - | chr4.1:53446815-53446834 | MS.gene069932:intron | 35.0% |
| ! | TGTTTGGTTCCAATTGTAGA+GGG | + | chr4.1:53447220-53447239 | None:intergenic | 35.0% |
| ! | TTATCAATCTCAGATAACGG+AGG | - | chr4.1:53447353-53447372 | MS.gene069932:intron | 35.0% |
| ! | TTTTTGACCCCAAAATTCTG+TGG | - | chr4.1:53448246-53448265 | MS.gene069932:intron | 35.0% |
| !! | AATTTGTAGCTCTGATTGAG+TGG | + | chr4.1:53449083-53449102 | None:intergenic | 35.0% |
| !! | ACCTTCAACTCACTTTTAGT+CGG | + | chr4.1:53447033-53447052 | None:intergenic | 35.0% |
| !! | ATTTGTAGCTCTGATTGAGT+GGG | + | chr4.1:53449082-53449101 | None:intergenic | 35.0% |
| !! | GGAACCAACAATTTTGGAAA+AGG | - | chr4.1:53449768-53449787 | MS.gene069932:intron | 35.0% |
| !! | GTCAATTCAACAGCTTTGTT+CGG | - | chr4.1:53450310-53450329 | MS.gene069932:intron | 35.0% |
| !! | TATAAATAAAGGGCATTGCC+AGG | + | chr4.1:53447424-53447443 | None:intergenic | 35.0% |
| !! | TATCAATCTCAGATAACGGA+GGG | - | chr4.1:53447354-53447373 | MS.gene069932:intron | 35.0% |
| !! | TTCGACATGTATAACTTGCT+TGG | - | chr4.1:53450877-53450896 | MS.gene069932:CDS | 35.0% |
| !!! | ATTGGTGCTGTCTTGTATTT+TGG | + | chr4.1:53447506-53447525 | None:intergenic | 35.0% |
| !!! | GTATAACTTGCTTGGTTTTG+CGG | - | chr4.1:53450885-53450904 | MS.gene069932:CDS | 35.0% |
| AAACAAAAAGTTGGGCAAGG+GGG | + | chr4.1:53448110-53448129 | None:intergenic | 40.0% | |
| AAACCGAACTGCATCTGAAT+CGG | + | chr4.1:53446582-53446601 | None:intergenic | 40.0% | |
| AAATAATCCCAGCCACATAG+TGG | + | chr4.1:53450274-53450293 | None:intergenic | 40.0% | |
| AAGGAGAATGCTGCATTCAT+CGG | - | chr4.1:53450124-53450143 | MS.gene069932:intron | 40.0% | |
| AAGGATATTGCAGAAAGAGC+AGG | - | chr4.1:53449670-53449689 | MS.gene069932:intron | 40.0% | |
| ACAAAGCCAAGAGCAAATAC+AGG | + | chr4.1:53448763-53448782 | None:intergenic | 40.0% | |
| ACAAGCTAAAGAGCTGCTAA+AGG | - | chr4.1:53450403-53450422 | MS.gene069932:intron | 40.0% | |
| AGAAGTTGAGGGGACTTTAA+AGG | - | chr4.1:53449651-53449670 | MS.gene069932:intron | 40.0% | |
| AGCACAGAGTTGTAGATACT+AGG | + | chr4.1:53448682-53448701 | None:intergenic | 40.0% | |
| AGCATATCTTTGCGCTATGT+TGG | - | chr4.1:53446608-53446627 | MS.gene069932:intron | 40.0% | |
| AGGATCATGTGTTTGATGCT+TGG | - | chr4.1:53446858-53446877 | MS.gene069932:intron | 40.0% | |
| ATCTAGAGAAGGAGAAGTTG+AGG | - | chr4.1:53449639-53449658 | MS.gene069932:intron | 40.0% | |
| ATGCACAGAAGTTAGAAGAG+TGG | - | chr4.1:53449578-53449597 | MS.gene069932:intron | 40.0% | |
| ATGTTCAGGCTTCATTAGAG+GGG | - | chr4.1:53450014-53450033 | MS.gene069932:intron | 40.0% | |
| CACTGTATATGACCAACTCA+TGG | - | chr4.1:53448783-53448802 | MS.gene069932:CDS | 40.0% | |
| CATGTTCAGGCTTCATTAGA+GGG | - | chr4.1:53450013-53450032 | MS.gene069932:intron | 40.0% | |
| CGCAAAGCTCAAGCATAAAA+GGG | + | chr4.1:53447320-53447339 | None:intergenic | 40.0% | |
| CGGTAACAAATTGCTGGTAA+AGG | - | chr4.1:53450144-53450163 | MS.gene069932:intron | 40.0% | |
| CTTTCATACATGACAGAGTG+TGG | - | chr4.1:53448338-53448357 | MS.gene069932:intron | 40.0% | |
| GTATATGACCAACTCATGGA+AGG | - | chr4.1:53448787-53448806 | MS.gene069932:CDS | 40.0% | |
| GTGTCTATTCTACCACTATG+TGG | - | chr4.1:53450259-53450278 | MS.gene069932:intron | 40.0% | |
| TATCTACAACTCTGTGCTAC+AGG | - | chr4.1:53448684-53448703 | MS.gene069932:CDS | 40.0% | |
| TATTCTACCACTATGTGGCT+GGG | - | chr4.1:53450264-53450283 | MS.gene069932:intron | 40.0% | |
| TCGCAATCTGCTTTCTAAGT+TGG | - | chr4.1:53450379-53450398 | MS.gene069932:intron | 40.0% | |
| TCGCAATTGAACTTTGTCGT+TGG | - | chr4.1:53446922-53446941 | MS.gene069932:intron | 40.0% | |
| TCTAGAGAAGGAGAAGTTGA+GGG | - | chr4.1:53449640-53449659 | MS.gene069932:intron | 40.0% | |
| TGAACCACAAAAGGCTAATG+AGG | - | chr4.1:53450972-53450991 | MS.gene069932:CDS | 40.0% | |
| TGAGAAAGAAGAAGTTACGG+CGG | + | chr4.1:53446492-53446511 | None:intergenic | 40.0% | |
| TGAGTGTTTGTATGTCTCTG+TGG | - | chr4.1:53448895-53448914 | MS.gene069932:intron | 40.0% | |
| TGATATACTGAGAACTTGGC+AGG | - | chr4.1:53450805-53450824 | MS.gene069932:CDS | 40.0% | |
| TGCACAGAAGTTAGAAGAGT+GGG | - | chr4.1:53449579-53449598 | MS.gene069932:intron | 40.0% | |
| TGGAGTTCGATCTTCCAATT+CGG | - | chr4.1:53446628-53446647 | MS.gene069932:intron | 40.0% | |
| TGGGGTTTCGAAATCATGTT+TGG | + | chr4.1:53449056-53449075 | None:intergenic | 40.0% | |
| TGTATCTCATCAGATGTTGC+TGG | + | chr4.1:53448720-53448739 | None:intergenic | 40.0% | |
| TTGTCTCAGAAACAGTTGGA+GGG | + | chr4.1:53448624-53448643 | None:intergenic | 40.0% | |
| TTTCAAACCTGACACAGAAG+AGG | + | chr4.1:53446678-53446697 | None:intergenic | 40.0% | |
| TTTGTCTCAGAAACAGTTGG+AGG | + | chr4.1:53448625-53448644 | None:intergenic | 40.0% | |
| ! | AACCAATTTGGAACCCGAAT+TGG | + | chr4.1:53446645-53446664 | None:intergenic | 40.0% |
| ! | CACTTTAGAGGTCAATGAGT+TGG | - | chr4.1:53447568-53447587 | MS.gene069932:intron | 40.0% |
| ! | CCTTTTATGCTTGAGCTTTG+CGG | - | chr4.1:53447318-53447337 | MS.gene069932:intron | 40.0% |
| ! | CTTGGTTGTTGTTGTTGTTG+TGG | - | chr4.1:53447666-53447685 | MS.gene069932:intron | 40.0% |
| ! | GTTTGGTTCCAATTGTAGAG+GGG | + | chr4.1:53447219-53447238 | None:intergenic | 40.0% |
| ! | TTCCAATTCGGGTTCCAAAT+TGG | - | chr4.1:53446640-53446659 | MS.gene069932:intron | 40.0% |
| !! | AGTTTAGCCTTGTAACCTCA+AGG | - | chr4.1:53448012-53448031 | MS.gene069932:intron | 40.0% |
| AGAAAGAGCAGGTGGAAATG+GGG | - | chr4.1:53449681-53449700 | MS.gene069932:intron | 45.0% | |
| AGAAAGGGCTGAACCACAAA+AGG | - | chr4.1:53450963-53450982 | MS.gene069932:CDS | 45.0% | |
| CACTCACTCAATCTTCTCAG+AGG | - | chr4.1:53446519-53446538 | MS.gene069932:CDS | 45.0% | |
| CAGAAAGAGCAGGTGGAAAT+GGG | - | chr4.1:53449680-53449699 | MS.gene069932:intron | 45.0% | |
| CATTCTAACCTGTATTGGGC+TGG | + | chr4.1:53448877-53448896 | None:intergenic | 45.0% | |
| CCATGTTCAGGCTTCATTAG+AGG | - | chr4.1:53450012-53450031 | MS.gene069932:intron | 45.0% | |
| CCGCAAAGCTCAAGCATAAA+AGG | + | chr4.1:53447321-53447340 | None:intergenic | 45.0% | |
| CCTCTAATGAAGCCTGAACA+TGG | + | chr4.1:53450015-53450034 | None:intergenic | 45.0% | |
| CGGGTTCCAAATTGGTTGTT+CGG | - | chr4.1:53446648-53446667 | MS.gene069932:intron | 45.0% | |
| CTAGAGAAGGAGAAGTTGAG+GGG | - | chr4.1:53449641-53449660 | MS.gene069932:intron | 45.0% | |
| CTATTCTACCACTATGTGGC+TGG | - | chr4.1:53450263-53450282 | MS.gene069932:intron | 45.0% | |
| CTCAGGGACACAACAAAAGT+TGG | + | chr4.1:53448279-53448298 | None:intergenic | 45.0% | |
| CTCTGATTGAGTGGGATTTG+GGG | + | chr4.1:53449074-53449093 | None:intergenic | 45.0% | |
| CTTTCTTCCACTCGCTTCTT+TGG | - | chr4.1:53446554-53446573 | MS.gene069932:intron | 45.0% | |
| GATATTGCAGAAAGAGCAGG+TGG | - | chr4.1:53449673-53449692 | MS.gene069932:intron | 45.0% | |
| GATCTCTCTTCTCCATGTTC+AGG | - | chr4.1:53450000-53450019 | MS.gene069932:intron | 45.0% | |
| GCATCTCTATCCTCATCACT+AGG | + | chr4.1:53448817-53448836 | None:intergenic | 45.0% | |
| GCTCTGATTGAGTGGGATTT+GGG | + | chr4.1:53449075-53449094 | None:intergenic | 45.0% | |
| GGAACACCGAACAACCAATT+TGG | + | chr4.1:53446657-53446676 | None:intergenic | 45.0% | |
| GGAGTTCGATCTTCCAATTC+GGG | - | chr4.1:53446629-53446648 | MS.gene069932:intron | 45.0% | |
| GTACCGAGTTCAAACAACCT+CGG | - | chr4.1:53448034-53448053 | MS.gene069932:intron | 45.0% | |
| GTTCCGATTCAGATGCAGTT+CGG | - | chr4.1:53446576-53446595 | MS.gene069932:intron | 45.0% | |
| TACCGAGTTCAAACAACCTC+GGG | - | chr4.1:53448035-53448054 | MS.gene069932:intron | 45.0% | |
| TAGGATACCCTTCCATGAGT+TGG | + | chr4.1:53448798-53448817 | None:intergenic | 45.0% | |
| TGGTGCCTAAAATGCACAAG+AGG | - | chr4.1:53447773-53447792 | MS.gene069932:CDS | 45.0% | |
| TGTTTGAACTCGGTACCTTG+AGG | + | chr4.1:53448030-53448049 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr4.1:53447649-53447668 | None:intergenic | 45.0% |
| ! | AGCTCTGATTGAGTGGGATT+TGG | + | chr4.1:53449076-53449095 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr4.1:53447650-53447669 | None:intergenic | 45.0% |
| ! | CATGTTTGGTTGCTTTCGAG+TGG | + | chr4.1:53447180-53447199 | None:intergenic | 45.0% |
| ! | GCCGACTAAAAGTGAGTTGA+AGG | - | chr4.1:53447029-53447048 | MS.gene069932:intron | 45.0% |
| ! | TCGCTAAGTGTTCTTGCTGT+CGG | + | chr4.1:53447386-53447405 | None:intergenic | 45.0% |
| !! | ACACTTAGCGAGATAACGGA+TGG | - | chr4.1:53447395-53447414 | MS.gene069932:intron | 45.0% |
| !!! | ATGGCCTCATTAGCCTTTTG+TGG | + | chr4.1:53450979-53450998 | None:intergenic | 45.0% |
| !!! | GCGGCTGGATTTTGATTCTT+TGG | - | chr4.1:53450904-53450923 | MS.gene069932:CDS | 45.0% |
| !! | ATATATAATAAAATAAGTAT+TGG | + | chr4.1:53449841-53449860 | None:intergenic | 5.0% |
| ACCGAGTTCAAACAACCTCG+GGG | - | chr4.1:53448036-53448055 | MS.gene069932:intron | 50.0% | |
| AGGAAGATCCAGCCCAATAC+AGG | - | chr4.1:53448866-53448885 | MS.gene069932:intron | 50.0% | |
| AGTTCAAACAACCTCGGGGA+CGG | - | chr4.1:53448040-53448059 | MS.gene069932:intron | 50.0% | |
| ATCGGAACCAAAGAAGCGAG+TGG | + | chr4.1:53446564-53446583 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr4.1:53447648-53447667 | MS.gene069932:intron | 50.0% | |
| CTCGGTACCTTGAGGTTACA+AGG | + | chr4.1:53448022-53448041 | None:intergenic | 50.0% | |
| CTGTGCATCTACTCTGCAGA+GGG | + | chr4.1:53449566-53449585 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr4.1:53447645-53447664 | None:intergenic | 50.0% | |
| GCAGAAAGAGCAGGTGGAAA+TGG | - | chr4.1:53449679-53449698 | MS.gene069932:intron | 50.0% | |
| TCCCCGAGGTTGTTTGAACT+CGG | + | chr4.1:53448040-53448059 | None:intergenic | 50.0% | |
| TCTGTGCATCTACTCTGCAG+AGG | + | chr4.1:53449567-53449586 | None:intergenic | 50.0% | |
| ! | ACACTGGCCTATATAGGGCA+AGG | - | chr4.1:53447868-53447887 | MS.gene069932:CDS | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr4.1:53447651-53447670 | None:intergenic | 50.0% |
| !! | CGACTTGCTATTTGTGCGAG+TGG | - | chr4.1:53447803-53447822 | MS.gene069932:CDS | 50.0% |
| !! | CTTAGCGAGATAACGGATGG+TGG | - | chr4.1:53447398-53447417 | MS.gene069932:intron | 50.0% |
| !! | GGAAGGGTATCCTAGTGATG+AGG | - | chr4.1:53448804-53448823 | MS.gene069932:CDS | 50.0% |
| !!! | AACTTGCTTGGTTTTGCGGC+TGG | - | chr4.1:53450889-53450908 | MS.gene069932:CDS | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr4.1:53447637-53447656 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr4.1:53447636-53447655 | MS.gene069932:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr4.1:53447643-53447662 | MS.gene069932:intron | 55.0% | |
| CGGTGTTCCTCTTCTGTGTC+AGG | - | chr4.1:53446668-53446687 | MS.gene069932:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr4.1:53447637-53447656 | MS.gene069932:intron | 55.0% | |
| CAAACAACCTCGGGGACGGT+TGG | - | chr4.1:53448044-53448063 | MS.gene069932:intron | 60.0% | |
| CCTCGGGGACGGTTGGAAAA+TGG | - | chr4.1:53448051-53448070 | MS.gene069932:intron | 60.0% | |
| ! | CCATTTTCCAACCGTCCCCG+AGG | + | chr4.1:53448054-53448073 | None:intergenic | 60.0% |
| !! | CGAGATAACGGATGGTGGCC+TGG | - | chr4.1:53447403-53447422 | MS.gene069932:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 53446485 | 53451008 | 53446485 | ID=MS.gene069932 |
| chr4.1 | mRNA | 53446485 | 53451008 | 53446485 | ID=MS.gene069932.t1;Parent=MS.gene069932 |
| chr4.1 | exon | 53450804 | 53451008 | 53450804 | ID=MS.gene069932.t1.exon1;Parent=MS.gene069932.t1 |
| chr4.1 | CDS | 53450804 | 53451008 | 53450804 | ID=cds.MS.gene069932.t1;Parent=MS.gene069932.t1 |
| chr4.1 | exon | 53448606 | 53448873 | 53448606 | ID=MS.gene069932.t1.exon2;Parent=MS.gene069932.t1 |
| chr4.1 | CDS | 53448606 | 53448873 | 53448606 | ID=cds.MS.gene069932.t1;Parent=MS.gene069932.t1 |
| chr4.1 | exon | 53447704 | 53447920 | 53447704 | ID=MS.gene069932.t1.exon3;Parent=MS.gene069932.t1 |
| chr4.1 | CDS | 53447704 | 53447920 | 53447704 | ID=cds.MS.gene069932.t1;Parent=MS.gene069932.t1 |
| chr4.1 | exon | 53447055 | 53447170 | 53447055 | ID=MS.gene069932.t1.exon4;Parent=MS.gene069932.t1 |
| chr4.1 | CDS | 53447055 | 53447170 | 53447055 | ID=cds.MS.gene069932.t1;Parent=MS.gene069932.t1 |
| chr4.1 | exon | 53446485 | 53446548 | 53446485 | ID=MS.gene069932.t1.exon5;Parent=MS.gene069932.t1 |
| chr4.1 | CDS | 53446485 | 53446548 | 53446485 | ID=cds.MS.gene069932.t1;Parent=MS.gene069932.t1 |
| Gene Sequence |
| Protein sequence |
