Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074603.t1 | XP_013458671.1 | 100 | 246 | 0 | 0 | 1 | 246 | 458 | 703 | 6.80E-135 | 490 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074603.t1 | P93008 | 86.9 | 245 | 32 | 0 | 2 | 246 | 486 | 730 | 8.2e-121 | 434.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074603.t1 | A0A072UUE3 | 100.0 | 246 | 0 | 0 | 1 | 246 | 458 | 703 | 4.9e-135 | 490.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene074603 | 0.817806 | 2.72E-52 | -1.69E-46 |
| MS.gene04920 | MS.gene074603 | 0.820179 | 7.86E-53 | -1.69E-46 |
| MS.gene049254 | MS.gene074603 | 0.803011 | 4.27E-49 | -1.69E-46 |
| MS.gene049283 | MS.gene074603 | 0.816516 | 5.31E-52 | -1.69E-46 |
| MS.gene049368 | MS.gene074603 | 0.801599 | 8.35E-49 | -1.69E-46 |
| MS.gene049499 | MS.gene074603 | 0.814316 | 1.64E-51 | -1.69E-46 |
| MS.gene049580 | MS.gene074603 | 0.804423 | 2.18E-49 | -1.69E-46 |
| MS.gene049680 | MS.gene074603 | 0.810079 | 1.38E-50 | -1.69E-46 |
| MS.gene049825 | MS.gene074603 | 0.809392 | 1.94E-50 | -1.69E-46 |
| MS.gene049873 | MS.gene074603 | 0.820415 | 6.94E-53 | -1.69E-46 |
| MS.gene049983 | MS.gene074603 | 0.805523 | 1.28E-49 | -1.69E-46 |
| MS.gene050752 | MS.gene074603 | 0.814367 | 1.60E-51 | -1.69E-46 |
| MS.gene050955 | MS.gene074603 | 0.823833 | 1.12E-53 | -1.69E-46 |
| MS.gene051003 | MS.gene074603 | 0.838279 | 3.16E-57 | -1.69E-46 |
| MS.gene051241 | MS.gene074603 | 0.804088 | 2.55E-49 | -1.69E-46 |
| MS.gene05134 | MS.gene074603 | 0.829184 | 5.93E-55 | -1.69E-46 |
| MS.gene051363 | MS.gene074603 | 0.835902 | 1.28E-56 | -1.69E-46 |
| MS.gene051365 | MS.gene074603 | 0.829016 | 6.52E-55 | -1.69E-46 |
| MS.gene051597 | MS.gene074603 | 0.844713 | 6.38E-59 | -1.69E-46 |
| MS.gene05188 | MS.gene074603 | 0.818285 | 2.12E-52 | -1.69E-46 |
| MS.gene051975 | MS.gene074603 | 0.805144 | 1.54E-49 | -1.69E-46 |
| MS.gene052500 | MS.gene074603 | 0.808917 | 2.45E-50 | -1.69E-46 |
| MS.gene052502 | MS.gene074603 | 0.80024 | 1.58E-48 | -1.69E-46 |
| MS.gene052518 | MS.gene074603 | 0.822588 | 2.19E-53 | -1.69E-46 |
| MS.gene052519 | MS.gene074603 | 0.86431 | 1.33E-64 | -1.69E-46 |
| MS.gene052685 | MS.gene074603 | 0.803557 | 3.29E-49 | -1.69E-46 |
| MS.gene052826 | MS.gene074603 | 0.804438 | 2.16E-49 | -1.69E-46 |
| MS.gene052954 | MS.gene074603 | 0.818978 | 1.48E-52 | -1.69E-46 |
| MS.gene053006 | MS.gene074603 | 0.83255 | 8.87E-56 | -1.69E-46 |
| MS.gene053008 | MS.gene074603 | 0.811735 | 6.03E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene074603 | 0.809302 | 2.02E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene074603 | 0.800733 | 1.26E-48 | -1.69E-46 |
| MS.gene053931 | MS.gene074603 | 0.831382 | 1.72E-55 | -1.69E-46 |
| MS.gene053963 | MS.gene074603 | 0.80035 | 1.50E-48 | -1.69E-46 |
| MS.gene053995 | MS.gene074603 | 0.800335 | 1.51E-48 | -1.69E-46 |
| MS.gene054403 | MS.gene074603 | 0.819089 | 1.39E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene074603 | 0.816681 | 4.88E-52 | -1.69E-46 |
| MS.gene054657 | MS.gene074603 | 0.815654 | 8.28E-52 | -1.69E-46 |
| MS.gene05517 | MS.gene074603 | 0.831747 | 1.40E-55 | -1.69E-46 |
| MS.gene05548 | MS.gene074603 | 0.817882 | 2.62E-52 | -1.69E-46 |
| MS.gene055555 | MS.gene074603 | 0.843385 | 1.45E-58 | -1.69E-46 |
| MS.gene055841 | MS.gene074603 | 0.838184 | 3.34E-57 | -1.69E-46 |
| MS.gene056215 | MS.gene074603 | 0.805573 | 1.25E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene074603 | 0.802828 | 4.66E-49 | -1.69E-46 |
| MS.gene056776 | MS.gene074603 | 0.817321 | 3.50E-52 | -1.69E-46 |
| MS.gene056986 | MS.gene074603 | 0.825369 | 4.87E-54 | -1.69E-46 |
| MS.gene057102 | MS.gene074603 | 0.832675 | 8.26E-56 | -1.69E-46 |
| MS.gene057208 | MS.gene074603 | 0.863969 | 1.70E-64 | -1.69E-46 |
| MS.gene057392 | MS.gene074603 | 0.828934 | 6.82E-55 | -1.69E-46 |
| MS.gene057694 | MS.gene074603 | 0.805502 | 1.29E-49 | -1.69E-46 |
| MS.gene057705 | MS.gene074603 | 0.835045 | 2.11E-56 | -1.69E-46 |
| MS.gene05781 | MS.gene074603 | 0.81949 | 1.13E-52 | -1.69E-46 |
| MS.gene058008 | MS.gene074603 | 0.864719 | 9.93E-65 | -1.69E-46 |
| MS.gene058009 | MS.gene074603 | 0.859282 | 4.61E-63 | -1.69E-46 |
| MS.gene058088 | MS.gene074603 | 0.808874 | 2.50E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene074603 | 0.807662 | 4.53E-50 | -1.69E-46 |
| MS.gene058781 | MS.gene074603 | 0.843569 | 1.29E-58 | -1.69E-46 |
| MS.gene058783 | MS.gene074603 | 0.878548 | 2.57E-69 | -1.69E-46 |
| MS.gene059146 | MS.gene074603 | 0.836704 | 8.01E-57 | -1.69E-46 |
| MS.gene059151 | MS.gene074603 | 0.80595 | 1.04E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene074603 | 0.815682 | 8.16E-52 | -1.69E-46 |
| MS.gene05979 | MS.gene074603 | 0.828563 | 8.39E-55 | -1.69E-46 |
| MS.gene059830 | MS.gene074603 | 0.813886 | 2.04E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene074603 | 0.816607 | 5.07E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene074603 | -0.803667 | 3.12E-49 | -1.69E-46 |
| MS.gene059901 | MS.gene074603 | -0.801215 | 1.00E-48 | -1.69E-46 |
| MS.gene059935 | MS.gene074603 | 0.822952 | 1.80E-53 | -1.69E-46 |
| MS.gene06011 | MS.gene074603 | 0.822414 | 2.40E-53 | -1.69E-46 |
| MS.gene060244 | MS.gene074603 | 0.832805 | 7.66E-56 | -1.69E-46 |
| MS.gene060365 | MS.gene074603 | 0.814177 | 1.76E-51 | -1.69E-46 |
| MS.gene060429 | MS.gene074603 | 0.807133 | 5.87E-50 | -1.69E-46 |
| MS.gene060586 | MS.gene074603 | 0.811179 | 7.97E-51 | -1.69E-46 |
| MS.gene060763 | MS.gene074603 | 0.819635 | 1.05E-52 | -1.69E-46 |
| MS.gene060917 | MS.gene074603 | 0.809794 | 1.59E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene074603 | 0.860723 | 1.69E-63 | -1.69E-46 |
| MS.gene060937 | MS.gene074603 | 0.837172 | 6.08E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074603.t1 | MTR_4g134170 | 99.595 | 247 | 1 | 0 | 1 | 247 | 458 | 704 | 4.64e-180 | 511 |
| MS.gene074603.t1 | MTR_6g005320 | 96.761 | 247 | 6 | 1 | 1 | 247 | 420 | 664 | 7.63e-173 | 492 |
| MS.gene074603.t1 | MTR_3g083690 | 44.393 | 214 | 111 | 3 | 28 | 233 | 333 | 546 | 2.44e-51 | 176 |
| MS.gene074603.t1 | MTR_1g054630 | 43.478 | 207 | 110 | 2 | 28 | 227 | 341 | 547 | 1.96e-49 | 171 |
| MS.gene074603.t1 | MTR_1g095810 | 41.262 | 206 | 119 | 2 | 19 | 223 | 323 | 527 | 3.90e-47 | 165 |
| MS.gene074603.t1 | MTR_1g026830 | 40.777 | 206 | 120 | 2 | 19 | 223 | 325 | 529 | 1.41e-46 | 163 |
| MS.gene074603.t1 | MTR_2g100230 | 43.434 | 198 | 110 | 2 | 28 | 223 | 274 | 471 | 2.36e-46 | 161 |
| MS.gene074603.t1 | MTR_3g467550 | 41.709 | 199 | 101 | 2 | 30 | 216 | 267 | 462 | 1.27e-44 | 157 |
| MS.gene074603.t1 | MTR_3g467550 | 41.709 | 199 | 101 | 2 | 30 | 216 | 298 | 493 | 1.46e-44 | 157 |
| MS.gene074603.t1 | MTR_6g005550 | 44.444 | 198 | 106 | 3 | 28 | 222 | 342 | 538 | 8.52e-44 | 157 |
| MS.gene074603.t1 | MTR_4g114120 | 41.584 | 202 | 114 | 2 | 28 | 225 | 333 | 534 | 6.36e-43 | 154 |
| MS.gene074603.t1 | MTR_2g032630 | 42.991 | 214 | 117 | 4 | 28 | 238 | 673 | 884 | 1.92e-41 | 151 |
| MS.gene074603.t1 | MTR_4g105100 | 39.512 | 205 | 122 | 2 | 21 | 223 | 373 | 577 | 2.23e-40 | 147 |
| MS.gene074603.t1 | MTR_7g109720 | 40.909 | 198 | 114 | 3 | 28 | 222 | 410 | 607 | 3.65e-40 | 147 |
| MS.gene074603.t1 | MTR_2g007000 | 41.837 | 196 | 113 | 1 | 28 | 222 | 685 | 880 | 4.08e-37 | 139 |
| MS.gene074603.t1 | MTR_6g082080 | 36.957 | 184 | 116 | 0 | 28 | 211 | 186 | 369 | 2.07e-35 | 131 |
| MS.gene074603.t1 | MTR_7g056830 | 36.957 | 184 | 116 | 0 | 28 | 211 | 186 | 369 | 2.49e-35 | 130 |
| MS.gene074603.t1 | MTR_5g090120 | 44.509 | 173 | 92 | 3 | 28 | 197 | 258 | 429 | 2.52e-35 | 132 |
| MS.gene074603.t1 | MTR_3g449250 | 42.365 | 203 | 102 | 5 | 28 | 216 | 267 | 468 | 5.04e-35 | 132 |
| MS.gene074603.t1 | MTR_3g449250 | 42.365 | 203 | 102 | 5 | 28 | 216 | 267 | 468 | 5.15e-35 | 131 |
| MS.gene074603.t1 | MTR_1g012420 | 37.879 | 198 | 115 | 3 | 15 | 204 | 204 | 401 | 6.53e-35 | 129 |
| MS.gene074603.t1 | MTR_5g027840 | 38.350 | 206 | 114 | 4 | 28 | 224 | 283 | 484 | 2.00e-34 | 129 |
| MS.gene074603.t1 | MTR_3g107420 | 37.374 | 198 | 116 | 3 | 15 | 204 | 204 | 401 | 2.05e-34 | 128 |
| MS.gene074603.t1 | MTR_4g010565 | 37.368 | 190 | 112 | 2 | 15 | 197 | 281 | 470 | 8.65e-34 | 127 |
| MS.gene074603.t1 | MTR_4g079320 | 35.204 | 196 | 125 | 1 | 28 | 221 | 195 | 390 | 2.94e-33 | 127 |
| MS.gene074603.t1 | MTR_2g099620 | 35.714 | 182 | 112 | 2 | 32 | 210 | 202 | 381 | 5.74e-33 | 124 |
| MS.gene074603.t1 | MTR_2g099620 | 35.714 | 182 | 112 | 2 | 32 | 210 | 218 | 397 | 5.92e-33 | 124 |
| MS.gene074603.t1 | MTR_7g100820 | 35.938 | 192 | 122 | 1 | 32 | 222 | 311 | 502 | 8.51e-33 | 125 |
| MS.gene074603.t1 | MTR_2g438110 | 33.520 | 179 | 118 | 1 | 32 | 209 | 211 | 389 | 5.05e-32 | 121 |
| MS.gene074603.t1 | MTR_8g018400 | 33.333 | 195 | 125 | 2 | 32 | 223 | 218 | 410 | 8.05e-32 | 121 |
| MS.gene074603.t1 | MTR_2g039960 | 36.111 | 180 | 114 | 1 | 32 | 210 | 218 | 397 | 1.39e-31 | 120 |
| MS.gene074603.t1 | MTR_4g125970 | 34.615 | 182 | 114 | 2 | 32 | 210 | 218 | 397 | 2.27e-31 | 120 |
| MS.gene074603.t1 | MTR_7g076830 | 34.715 | 193 | 125 | 1 | 28 | 220 | 316 | 507 | 3.33e-31 | 120 |
| MS.gene074603.t1 | MTR_7g076800 | 34.715 | 193 | 125 | 1 | 28 | 220 | 314 | 505 | 3.48e-31 | 120 |
| MS.gene074603.t1 | MTR_4g125970 | 34.615 | 182 | 114 | 2 | 32 | 210 | 235 | 414 | 4.08e-31 | 119 |
| MS.gene074603.t1 | MTR_3g467550 | 41.176 | 153 | 75 | 2 | 30 | 170 | 298 | 447 | 1.00e-30 | 119 |
| MS.gene074603.t1 | MTR_7g076820 | 34.197 | 193 | 126 | 1 | 28 | 220 | 323 | 514 | 1.68e-30 | 119 |
| MS.gene074603.t1 | MTR_6g033070 | 31.980 | 197 | 125 | 3 | 32 | 222 | 323 | 516 | 4.01e-28 | 112 |
| MS.gene074603.t1 | MTR_2g066050 | 34.225 | 187 | 120 | 1 | 28 | 211 | 229 | 415 | 1.78e-27 | 110 |
| MS.gene074603.t1 | MTR_2g041140 | 36.111 | 180 | 112 | 1 | 28 | 204 | 319 | 498 | 2.53e-27 | 110 |
| MS.gene074603.t1 | MTR_3g049990 | 35.556 | 180 | 113 | 1 | 28 | 204 | 329 | 508 | 5.78e-27 | 109 |
| MS.gene074603.t1 | MTR_8g018370 | 32.967 | 182 | 118 | 2 | 32 | 210 | 128 | 308 | 6.52e-27 | 106 |
| MS.gene074603.t1 | MTR_1g102410 | 37.079 | 178 | 88 | 5 | 30 | 195 | 247 | 412 | 4.26e-25 | 103 |
| MS.gene074603.t1 | MTR_3g071620 | 34.348 | 230 | 121 | 8 | 28 | 229 | 197 | 424 | 5.21e-25 | 103 |
| MS.gene074603.t1 | MTR_6g056080 | 34.804 | 204 | 118 | 6 | 30 | 224 | 290 | 487 | 5.77e-25 | 103 |
| MS.gene074603.t1 | MTR_5g069330 | 32.484 | 157 | 106 | 0 | 28 | 184 | 182 | 338 | 2.91e-21 | 92.0 |
| MS.gene074603.t1 | MTR_5g069330 | 32.484 | 157 | 106 | 0 | 28 | 184 | 186 | 342 | 3.17e-21 | 92.0 |
| MS.gene074603.t1 | MTR_4g105100 | 36.242 | 149 | 93 | 2 | 21 | 167 | 373 | 521 | 6.46e-21 | 91.7 |
| MS.gene074603.t1 | MTR_2g055850 | 31.892 | 185 | 122 | 2 | 28 | 208 | 270 | 454 | 3.74e-20 | 89.7 |
| MS.gene074603.t1 | MTR_8g027780 | 30.000 | 200 | 130 | 4 | 28 | 219 | 292 | 489 | 1.88e-19 | 87.4 |
| MS.gene074603.t1 | MTR_8g027775 | 30.693 | 202 | 126 | 5 | 28 | 219 | 288 | 485 | 2.89e-19 | 87.0 |
| MS.gene074603.t1 | MTR_7g057250 | 27.236 | 246 | 146 | 4 | 3 | 215 | 353 | 598 | 4.58e-19 | 86.7 |
| MS.gene074603.t1 | MTR_5g092560 | 30.108 | 186 | 125 | 3 | 28 | 208 | 43 | 228 | 2.22e-18 | 84.3 |
| MS.gene074603.t1 | MTR_5g092560 | 30.108 | 186 | 125 | 3 | 28 | 208 | 254 | 439 | 3.56e-18 | 84.0 |
| MS.gene074603.t1 | MTR_4g059460 | 38.298 | 94 | 58 | 0 | 116 | 209 | 385 | 478 | 8.00e-18 | 82.8 |
| MS.gene074603.t1 | MTR_2g063080 | 26.106 | 226 | 132 | 2 | 18 | 211 | 303 | 525 | 8.20e-18 | 82.8 |
| MS.gene074603.t1 | MTR_1g046570 | 31.638 | 177 | 106 | 6 | 32 | 197 | 197 | 369 | 8.96e-18 | 82.0 |
| MS.gene074603.t1 | MTR_2g043360 | 37.234 | 94 | 59 | 0 | 116 | 209 | 264 | 357 | 2.01e-17 | 81.6 |
| MS.gene074603.t1 | MTR_2g043360 | 37.234 | 94 | 59 | 0 | 116 | 209 | 382 | 475 | 3.17e-17 | 81.3 |
| MS.gene074603.t1 | MTR_4g068990 | 28.283 | 198 | 136 | 4 | 28 | 220 | 254 | 450 | 3.41e-17 | 81.3 |
| MS.gene074603.t1 | MTR_4g068990 | 28.283 | 198 | 136 | 4 | 28 | 220 | 43 | 239 | 3.46e-17 | 80.9 |
| MS.gene074603.t1 | MTR_4g112320 | 29.412 | 187 | 126 | 4 | 28 | 209 | 95 | 280 | 5.03e-17 | 80.1 |
| MS.gene074603.t1 | MTR_4g112340 | 29.412 | 187 | 126 | 4 | 28 | 209 | 277 | 462 | 7.47e-17 | 80.1 |
| MS.gene074603.t1 | MTR_8g027770 | 28.500 | 200 | 133 | 4 | 28 | 219 | 387 | 584 | 7.73e-17 | 80.1 |
| MS.gene074603.t1 | MTR_4g049910 | 35.897 | 117 | 65 | 1 | 91 | 197 | 293 | 409 | 8.33e-17 | 79.7 |
| MS.gene074603.t1 | MTR_8g097000 | 27.638 | 199 | 136 | 3 | 28 | 219 | 474 | 671 | 3.70e-16 | 78.2 |
| MS.gene074603.t1 | MTR_8g062720 | 40.196 | 102 | 60 | 1 | 96 | 197 | 439 | 539 | 9.85e-16 | 76.6 |
| MS.gene074603.t1 | MTR_5g077690 | 30.000 | 180 | 122 | 3 | 32 | 207 | 272 | 451 | 1.97e-15 | 75.9 |
| MS.gene074603.t1 | MTR_1g061970 | 35.345 | 116 | 61 | 1 | 96 | 197 | 335 | 450 | 1.80e-14 | 72.8 |
| MS.gene074603.t1 | MTR_8g079462 | 29.444 | 180 | 123 | 3 | 32 | 207 | 88 | 267 | 5.78e-14 | 70.5 |
| MS.gene074603.t1 | MTR_8g080160 | 30.252 | 119 | 80 | 1 | 93 | 211 | 493 | 608 | 7.58e-14 | 71.2 |
| MS.gene074603.t1 | MTR_6g039840 | 30.159 | 189 | 122 | 4 | 30 | 211 | 302 | 487 | 1.20e-13 | 70.5 |
| MS.gene074603.t1 | MTR_6g039840 | 30.159 | 189 | 122 | 4 | 30 | 211 | 126 | 311 | 2.18e-13 | 69.7 |
| MS.gene074603.t1 | MTR_8g042690 | 30.370 | 135 | 88 | 2 | 65 | 196 | 238 | 369 | 6.77e-13 | 68.2 |
| MS.gene074603.t1 | MTR_2g006440 | 27.500 | 120 | 84 | 1 | 92 | 211 | 628 | 744 | 2.68e-12 | 66.6 |
| MS.gene074603.t1 | MTR_3g063040 | 31.746 | 126 | 77 | 1 | 84 | 200 | 214 | 339 | 7.80e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074603.t1 | AT2G33730 | 86.939 | 245 | 32 | 0 | 2 | 246 | 486 | 730 | 8.70e-149 | 432 |
| MS.gene074603.t1 | AT1G28180 | 67.373 | 236 | 71 | 4 | 5 | 238 | 133 | 364 | 1.90e-106 | 312 |
| MS.gene074603.t1 | AT3G58510 | 43.689 | 206 | 111 | 2 | 25 | 225 | 336 | 541 | 1.16e-52 | 180 |
| MS.gene074603.t1 | AT3G58510 | 43.689 | 206 | 111 | 2 | 25 | 225 | 336 | 541 | 1.16e-52 | 180 |
| MS.gene074603.t1 | AT3G58510 | 43.689 | 206 | 111 | 2 | 25 | 225 | 336 | 541 | 1.16e-52 | 180 |
| MS.gene074603.t1 | AT3G58570 | 43.478 | 207 | 110 | 1 | 28 | 227 | 334 | 540 | 2.08e-51 | 177 |
| MS.gene074603.t1 | AT2G42520 | 42.411 | 224 | 120 | 4 | 19 | 233 | 337 | 560 | 5.21e-51 | 176 |
| MS.gene074603.t1 | AT2G42520 | 42.411 | 224 | 120 | 4 | 19 | 233 | 337 | 560 | 5.21e-51 | 176 |
| MS.gene074603.t1 | AT2G42520 | 42.411 | 224 | 120 | 4 | 19 | 233 | 337 | 560 | 5.21e-51 | 176 |
| MS.gene074603.t1 | AT1G55150 | 43.243 | 222 | 120 | 3 | 28 | 243 | 278 | 499 | 5.66e-50 | 171 |
| MS.gene074603.t1 | AT1G55150 | 43.243 | 222 | 120 | 3 | 28 | 243 | 303 | 524 | 8.31e-50 | 171 |
| MS.gene074603.t1 | AT5G51280 | 41.748 | 206 | 118 | 2 | 19 | 223 | 325 | 529 | 2.95e-46 | 162 |
| MS.gene074603.t1 | AT4G33370 | 41.262 | 206 | 115 | 3 | 21 | 223 | 278 | 480 | 1.73e-45 | 160 |
| MS.gene074603.t1 | AT5G63120 | 40.909 | 198 | 115 | 2 | 28 | 223 | 344 | 541 | 2.47e-42 | 152 |
| MS.gene074603.t1 | AT3G01540 | 41.414 | 198 | 112 | 3 | 28 | 222 | 336 | 532 | 1.09e-41 | 150 |
| MS.gene074603.t1 | AT3G01540 | 41.414 | 198 | 112 | 3 | 28 | 222 | 336 | 532 | 1.09e-41 | 150 |
| MS.gene074603.t1 | AT3G01540 | 41.414 | 198 | 112 | 3 | 28 | 222 | 336 | 532 | 1.09e-41 | 150 |
| MS.gene074603.t1 | AT3G01540 | 41.414 | 198 | 112 | 3 | 28 | 222 | 336 | 532 | 1.22e-41 | 150 |
| MS.gene074603.t1 | AT3G06480 | 41.919 | 198 | 111 | 3 | 28 | 222 | 613 | 809 | 1.46e-41 | 152 |
| MS.gene074603.t1 | AT1G20920 | 40.704 | 199 | 117 | 1 | 25 | 222 | 708 | 906 | 3.51e-41 | 150 |
| MS.gene074603.t1 | AT1G20920 | 40.704 | 199 | 117 | 1 | 25 | 222 | 708 | 906 | 3.51e-41 | 150 |
| MS.gene074603.t1 | AT1G20920 | 40.704 | 199 | 117 | 1 | 25 | 222 | 708 | 906 | 3.51e-41 | 150 |
| MS.gene074603.t1 | AT1G20920 | 40.704 | 199 | 117 | 1 | 25 | 222 | 708 | 906 | 3.51e-41 | 150 |
| MS.gene074603.t1 | AT1G20920 | 40.704 | 199 | 117 | 1 | 25 | 222 | 708 | 906 | 3.51e-41 | 150 |
| MS.gene074603.t1 | AT1G20920 | 40.704 | 199 | 117 | 1 | 25 | 222 | 708 | 906 | 3.51e-41 | 150 |
| MS.gene074603.t1 | AT1G20920 | 40.704 | 199 | 117 | 1 | 25 | 222 | 370 | 568 | 6.55e-41 | 149 |
| MS.gene074603.t1 | AT5G14610 | 41.414 | 198 | 112 | 3 | 28 | 222 | 208 | 404 | 1.32e-40 | 146 |
| MS.gene074603.t1 | AT5G14610 | 41.414 | 198 | 112 | 3 | 28 | 222 | 208 | 404 | 1.32e-40 | 146 |
| MS.gene074603.t1 | AT5G14610 | 42.211 | 199 | 109 | 4 | 28 | 222 | 339 | 535 | 1.77e-40 | 147 |
| MS.gene074603.t1 | AT5G14610 | 41.414 | 198 | 112 | 3 | 28 | 222 | 339 | 535 | 1.80e-40 | 147 |
| MS.gene074603.t1 | AT5G14610 | 41.414 | 198 | 112 | 3 | 28 | 222 | 347 | 543 | 2.13e-40 | 147 |
| MS.gene074603.t1 | AT5G14610 | 41.262 | 206 | 115 | 4 | 21 | 222 | 400 | 603 | 3.66e-40 | 147 |
| MS.gene074603.t1 | AT2G47330 | 40.404 | 198 | 115 | 3 | 28 | 222 | 407 | 604 | 7.77e-40 | 146 |
| MS.gene074603.t1 | AT5G60990 | 34.906 | 212 | 132 | 1 | 16 | 221 | 178 | 389 | 9.91e-37 | 135 |
| MS.gene074603.t1 | AT1G31970 | 39.806 | 206 | 111 | 4 | 28 | 224 | 297 | 498 | 1.23e-36 | 135 |
| MS.gene074603.t1 | AT3G22310 | 42.077 | 183 | 96 | 4 | 17 | 192 | 281 | 460 | 8.60e-36 | 134 |
| MS.gene074603.t1 | AT3G22310 | 42.077 | 183 | 96 | 4 | 17 | 192 | 281 | 460 | 9.46e-36 | 134 |
| MS.gene074603.t1 | AT3G22330 | 38.991 | 218 | 123 | 6 | 19 | 231 | 276 | 488 | 2.35e-35 | 133 |
| MS.gene074603.t1 | AT5G11170 | 35.468 | 203 | 123 | 3 | 15 | 209 | 121 | 323 | 4.91e-34 | 125 |
| MS.gene074603.t1 | AT3G19760 | 34.078 | 179 | 117 | 1 | 32 | 209 | 213 | 391 | 1.93e-33 | 125 |
| MS.gene074603.t1 | AT5G11170 | 35.468 | 203 | 123 | 3 | 15 | 209 | 204 | 406 | 2.07e-33 | 125 |
| MS.gene074603.t1 | AT5G11200 | 35.468 | 203 | 123 | 3 | 15 | 209 | 204 | 406 | 2.07e-33 | 125 |
| MS.gene074603.t1 | AT1G51380 | 34.975 | 203 | 118 | 3 | 5 | 200 | 174 | 369 | 2.41e-33 | 125 |
| MS.gene074603.t1 | AT1G54270 | 36.111 | 180 | 114 | 1 | 32 | 210 | 212 | 391 | 3.19e-33 | 124 |
| MS.gene074603.t1 | AT1G54270 | 36.111 | 180 | 114 | 1 | 32 | 210 | 217 | 396 | 3.88e-33 | 124 |
| MS.gene074603.t1 | AT3G09720 | 34.842 | 221 | 137 | 4 | 32 | 245 | 319 | 539 | 1.06e-32 | 125 |
| MS.gene074603.t1 | AT3G09720 | 34.842 | 221 | 137 | 4 | 32 | 245 | 319 | 539 | 1.06e-32 | 125 |
| MS.gene074603.t1 | AT3G13920 | 34.615 | 182 | 114 | 2 | 32 | 210 | 212 | 391 | 2.28e-32 | 122 |
| MS.gene074603.t1 | AT3G13920 | 34.615 | 182 | 114 | 2 | 32 | 210 | 207 | 386 | 2.33e-32 | 122 |
| MS.gene074603.t1 | AT3G13920 | 34.615 | 182 | 114 | 2 | 32 | 210 | 217 | 396 | 2.80e-32 | 122 |
| MS.gene074603.t1 | AT3G13920 | 33.654 | 208 | 125 | 4 | 32 | 236 | 217 | 414 | 4.10e-32 | 122 |
| MS.gene074603.t1 | AT3G13920 | 33.654 | 208 | 125 | 4 | 32 | 236 | 221 | 418 | 4.15e-32 | 122 |
| MS.gene074603.t1 | AT1G72730 | 36.628 | 172 | 104 | 2 | 32 | 200 | 219 | 388 | 1.29e-31 | 120 |
| MS.gene074603.t1 | AT1G77030 | 33.673 | 196 | 128 | 1 | 28 | 221 | 205 | 400 | 2.30e-31 | 122 |
| MS.gene074603.t1 | AT4G00660 | 34.359 | 195 | 127 | 1 | 28 | 222 | 305 | 498 | 5.11e-31 | 120 |
| MS.gene074603.t1 | AT4G00660 | 34.359 | 195 | 127 | 1 | 28 | 222 | 305 | 498 | 5.11e-31 | 120 |
| MS.gene074603.t1 | AT5G26742 | 41.176 | 170 | 92 | 3 | 28 | 192 | 284 | 450 | 1.02e-30 | 120 |
| MS.gene074603.t1 | AT5G26742 | 41.176 | 170 | 92 | 3 | 28 | 192 | 284 | 450 | 1.02e-30 | 120 |
| MS.gene074603.t1 | AT5G26742 | 41.176 | 170 | 92 | 3 | 28 | 192 | 191 | 357 | 1.26e-30 | 120 |
| MS.gene074603.t1 | AT2G45810 | 33.679 | 193 | 125 | 2 | 28 | 219 | 328 | 518 | 5.98e-30 | 117 |
| MS.gene074603.t1 | AT3G61240 | 32.127 | 221 | 142 | 4 | 5 | 222 | 276 | 491 | 1.11e-29 | 116 |
| MS.gene074603.t1 | AT3G61240 | 32.127 | 221 | 142 | 4 | 5 | 222 | 276 | 491 | 1.11e-29 | 116 |
| MS.gene074603.t1 | AT3G09620 | 35.204 | 196 | 97 | 2 | 28 | 222 | 578 | 744 | 3.01e-28 | 113 |
| MS.gene074603.t1 | AT3G09620 | 35.204 | 196 | 97 | 2 | 28 | 222 | 579 | 745 | 3.01e-28 | 113 |
| MS.gene074603.t1 | AT4G16630 | 36.111 | 180 | 112 | 1 | 28 | 204 | 345 | 524 | 1.23e-27 | 111 |
| MS.gene074603.t1 | AT5G11200 | 40.278 | 144 | 85 | 1 | 67 | 209 | 322 | 465 | 2.84e-27 | 109 |
| MS.gene074603.t1 | AT5G11200 | 40.278 | 144 | 85 | 1 | 67 | 209 | 304 | 447 | 3.10e-27 | 109 |
| MS.gene074603.t1 | AT1G16280 | 32.973 | 185 | 121 | 1 | 28 | 209 | 235 | 419 | 1.18e-26 | 107 |
| MS.gene074603.t1 | AT3G02065 | 32.653 | 196 | 129 | 2 | 30 | 222 | 156 | 351 | 8.31e-26 | 104 |
| MS.gene074603.t1 | AT3G02065 | 32.990 | 194 | 127 | 2 | 32 | 222 | 295 | 488 | 1.68e-25 | 104 |
| MS.gene074603.t1 | AT3G02065 | 32.990 | 194 | 127 | 2 | 32 | 222 | 295 | 488 | 1.68e-25 | 104 |
| MS.gene074603.t1 | AT5G05450 | 36.559 | 186 | 99 | 4 | 28 | 196 | 199 | 382 | 3.78e-25 | 104 |
| MS.gene074603.t1 | AT5G62190 | 35.961 | 203 | 117 | 5 | 30 | 224 | 284 | 481 | 9.67e-25 | 103 |
| MS.gene074603.t1 | AT1G71370 | 34.066 | 182 | 112 | 3 | 28 | 202 | 199 | 379 | 1.21e-23 | 99.8 |
| MS.gene074603.t1 | AT3G53110 | 33.333 | 174 | 107 | 3 | 32 | 196 | 278 | 451 | 1.40e-20 | 90.9 |
| MS.gene074603.t1 | AT5G63120 | 38.168 | 131 | 79 | 2 | 28 | 156 | 344 | 474 | 2.88e-20 | 89.7 |
| MS.gene074603.t1 | AT5G63120 | 38.168 | 131 | 79 | 2 | 28 | 156 | 344 | 474 | 2.88e-20 | 89.7 |
| MS.gene074603.t1 | AT5G63120 | 38.168 | 131 | 79 | 2 | 28 | 156 | 344 | 474 | 2.88e-20 | 89.7 |
| MS.gene074603.t1 | AT5G63120 | 38.168 | 131 | 79 | 2 | 28 | 156 | 344 | 474 | 2.93e-20 | 89.7 |
| MS.gene074603.t1 | AT5G14610 | 37.956 | 137 | 81 | 3 | 28 | 161 | 347 | 482 | 6.51e-20 | 89.0 |
| MS.gene074603.t1 | AT3G18600 | 32.609 | 184 | 121 | 2 | 28 | 208 | 268 | 451 | 1.53e-19 | 87.8 |
| MS.gene074603.t1 | AT5G08610 | 28.500 | 200 | 135 | 3 | 28 | 220 | 569 | 767 | 1.88e-19 | 87.8 |
| MS.gene074603.t1 | AT2G40700 | 33.793 | 145 | 78 | 2 | 83 | 209 | 323 | 467 | 7.86e-19 | 85.9 |
| MS.gene074603.t1 | AT3G06480 | 36.170 | 141 | 86 | 3 | 28 | 165 | 613 | 752 | 9.32e-19 | 85.9 |
| MS.gene074603.t1 | AT5G08620 | 30.332 | 211 | 133 | 6 | 28 | 229 | 267 | 472 | 1.10e-18 | 85.5 |
| MS.gene074603.t1 | AT5G54910 | 30.622 | 209 | 132 | 6 | 27 | 224 | 249 | 455 | 1.18e-18 | 85.5 |
| MS.gene074603.t1 | AT2G07750 | 30.542 | 203 | 130 | 5 | 28 | 222 | 563 | 762 | 1.27e-18 | 85.5 |
| MS.gene074603.t1 | AT5G65900 | 32.275 | 189 | 124 | 3 | 28 | 212 | 333 | 521 | 4.22e-18 | 83.6 |
| MS.gene074603.t1 | AT5G63630 | 30.151 | 199 | 131 | 3 | 28 | 219 | 435 | 632 | 6.93e-18 | 83.2 |
| MS.gene074603.t1 | AT5G63630 | 30.151 | 199 | 131 | 3 | 28 | 219 | 241 | 438 | 7.41e-18 | 82.8 |
| MS.gene074603.t1 | AT4G15850 | 29.016 | 193 | 133 | 2 | 32 | 220 | 274 | 466 | 7.84e-18 | 82.8 |
| MS.gene074603.t1 | AT1G63250 | 31.034 | 203 | 129 | 6 | 28 | 222 | 516 | 715 | 1.60e-17 | 82.0 |
| MS.gene074603.t1 | AT3G16840 | 29.412 | 170 | 120 | 0 | 51 | 220 | 462 | 631 | 2.71e-17 | 81.6 |
| MS.gene074603.t1 | AT3G16840 | 29.412 | 170 | 120 | 0 | 51 | 220 | 461 | 630 | 2.73e-17 | 81.6 |
| MS.gene074603.t1 | AT1G12770 | 26.407 | 231 | 130 | 5 | 20 | 217 | 306 | 529 | 4.53e-17 | 80.5 |
| MS.gene074603.t1 | AT1G12770 | 26.407 | 231 | 130 | 5 | 20 | 217 | 306 | 529 | 4.53e-17 | 80.5 |
| MS.gene074603.t1 | AT1G59990 | 33.333 | 129 | 84 | 2 | 96 | 224 | 428 | 554 | 2.89e-16 | 78.2 |
| MS.gene074603.t1 | AT1G59990 | 33.333 | 129 | 84 | 2 | 96 | 224 | 428 | 554 | 3.33e-16 | 78.2 |
| MS.gene074603.t1 | AT5G19210 | 29.944 | 177 | 104 | 5 | 28 | 185 | 259 | 434 | 3.24e-13 | 69.3 |
| MS.gene074603.t1 | AT4G09730 | 30.899 | 178 | 113 | 4 | 30 | 200 | 305 | 479 | 3.61e-13 | 69.3 |
| MS.gene074603.t1 | AT5G19210 | 29.944 | 177 | 104 | 5 | 28 | 185 | 102 | 277 | 3.85e-13 | 68.2 |
| MS.gene074603.t1 | AT5G19210 | 29.944 | 177 | 104 | 5 | 28 | 185 | 102 | 277 | 3.85e-13 | 68.2 |
| MS.gene074603.t1 | AT1G27880 | 29.661 | 118 | 80 | 1 | 93 | 210 | 487 | 601 | 3.23e-11 | 63.5 |
| MS.gene074603.t1 | AT1G27880 | 29.661 | 118 | 80 | 1 | 93 | 210 | 487 | 601 | 3.40e-11 | 63.5 |
Find 65 sgRNAs with CRISPR-Local
Find 63 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAGATCCTGGCTTGAATT+TGG | 0.231521 | 8.4:+584040 | None:intergenic |
| AGATTAGTCTTGAAGGATTT+AGG | 0.252142 | 8.4:-584328 | MS.gene074603:CDS |
| TTGATGAGAAGAGGATTTAT+AGG | 0.256546 | 8.4:-584661 | MS.gene074603:CDS |
| ACCTCAAGAAAATTCTCTAA+TGG | 0.293400 | 8.4:+583980 | None:intergenic |
| AAGAAAATCAGCGCTCTTCT+TGG | 0.298072 | 8.4:+584421 | None:intergenic |
| GCTTCATGCCTTGCCAATTC+AGG | 0.302855 | 8.4:+584065 | None:intergenic |
| AGTTCCTCATCTTCATTCTC+TGG | 0.351472 | 8.4:+584683 | None:intergenic |
| CAGTCCTGTTCCACCTGAAT+TGG | 0.392949 | 8.4:-584078 | MS.gene074603:CDS |
| CCTCAAGAAAATTCTCTAAT+GGG | 0.393770 | 8.4:+583981 | None:intergenic |
| CTTGTTGCAACTGATGTTGC+TGG | 0.393795 | 8.4:-584287 | MS.gene074603:CDS |
| TACAACATTCCTGACTCTTC+AGG | 0.394751 | 8.4:-584147 | MS.gene074603:CDS |
| AAATGTACACCCATCGTATT+GGG | 0.397102 | 8.4:-584202 | MS.gene074603:CDS |
| GTACCTATAGTCACGACAAC+AGG | 0.415743 | 8.4:+584569 | None:intergenic |
| GAAATGTACACCCATCGTAT+TGG | 0.424823 | 8.4:-584203 | MS.gene074603:CDS |
| CTTGCCAATTCAGGTGGAAC+AGG | 0.427377 | 8.4:+584074 | None:intergenic |
| TCTGGTTTGAGATTACTAGA+AGG | 0.435140 | 8.4:+584701 | None:intergenic |
| AACAAGCACATTATATCTCT+TGG | 0.438220 | 8.4:+584304 | None:intergenic |
| GTTATCAACTATGATATGCC+TGG | 0.451885 | 8.4:-584233 | MS.gene074603:CDS |
| TTATAAGCTTCAGAGATTGT+TGG | 0.455794 | 8.4:-584483 | MS.gene074603:CDS |
| CAGAGGGAGATTAGTCTTGA+AGG | 0.474519 | 8.4:-584335 | MS.gene074603:CDS |
| AACCCTGTTGTCGTGACTAT+AGG | 0.480050 | 8.4:-584572 | MS.gene074603:CDS |
| GGCTTGCTAGAAAGTATTTG+AGG | 0.491288 | 8.4:-584595 | MS.gene074603:CDS |
| TTGATAACATGAGCCACATC+AGG | 0.497781 | 8.4:+584248 | None:intergenic |
| ACCCATCGTATTGGGCGTAC+TGG | 0.502956 | 8.4:-584194 | MS.gene074603:CDS |
| TGCTACCATGCCTCCTGCGG+TGG | 0.509902 | 8.4:-584621 | MS.gene074603:CDS |
| ACTGGTCGTGCAGGAAAGAC+GGG | 0.515003 | 8.4:-584176 | MS.gene074603:CDS |
| TATCGCGTGACCACTTTGCA+TGG | 0.515234 | 8.4:-584374 | MS.gene074603:CDS |
| CATCAGTGTCCTGAAGAGTC+AGG | 0.517770 | 8.4:+584138 | None:intergenic |
| CCATGCCTCCTGCGGTGGAG+AGG | 0.521827 | 8.4:-584616 | MS.gene074603:CDS |
| TACTGGTCGTGCAGGAAAGA+CGG | 0.523897 | 8.4:-584177 | MS.gene074603:CDS |
| ATTTCGCCTAGGTGGTCTGT+CGG | 0.525141 | 8.4:+584016 | None:intergenic |
| GCGTGACCACTTTGCATGGA+GGG | 0.527382 | 8.4:-584370 | MS.gene074603:CDS |
| GGTCTGTCGGGAATAGATCC+TGG | 0.531479 | 8.4:+584029 | None:intergenic |
| ATGAGGAACTTGATGAGAAG+AGG | 0.531706 | 8.4:-584670 | MS.gene074603:CDS |
| GCTAAGAATTTGGACAAGGA+AGG | 0.533137 | 8.4:-584398 | MS.gene074603:CDS |
| TTTCGCCTAGGTGGTCTGTC+GGG | 0.533463 | 8.4:+584017 | None:intergenic |
| GCAACTGATGTTGCTGGACG+TGG | 0.534104 | 8.4:-584281 | MS.gene074603:CDS |
| CTTTCATCATGATCACATGC+TGG | 0.534873 | 8.4:+584519 | None:intergenic |
| ATTGGGCGTACTGGTCGTGC+AGG | 0.537891 | 8.4:-584185 | MS.gene074603:CDS |
| CTAGCAAGCCTCTCCACCGC+AGG | 0.541300 | 8.4:+584608 | None:intergenic |
| GTCGTGACTATAGGTACTGC+TGG | 0.550829 | 8.4:-584563 | MS.gene074603:CDS |
| CCTCTCCACCGCAGGAGGCA+TGG | 0.551441 | 8.4:+584616 | None:intergenic |
| GTGTACATTTCAATATTCCC+AGG | 0.556474 | 8.4:+584215 | None:intergenic |
| GCAAGCCTCTCCACCGCAGG+AGG | 0.558194 | 8.4:+584611 | None:intergenic |
| TTATCAACTATGATATGCCT+GGG | 0.566309 | 8.4:-584232 | MS.gene074603:CDS |
| ACCAGTACGCCCAATACGAT+GGG | 0.574501 | 8.4:+584193 | None:intergenic |
| GCCGCAGGTCATGGGTGTGT+TGG | 0.578251 | 8.4:-584732 | None:intergenic |
| TCATGCCTTGCCAATTCAGG+TGG | 0.578546 | 8.4:+584068 | None:intergenic |
| GAAGCTTCCAAATTCAAGCC+AGG | 0.584125 | 8.4:-584047 | MS.gene074603:CDS |
| GAGGGAAATCACAGGATCAG+AGG | 0.584484 | 8.4:-584352 | MS.gene074603:CDS |
| GACCAGTACGCCCAATACGA+TGG | 0.591341 | 8.4:+584192 | None:intergenic |
| TCGTGCAGGAAAGACGGGTG+TGG | 0.592030 | 8.4:-584171 | MS.gene074603:CDS |
| CTGTTCCACCTGAATTGGCA+AGG | 0.607946 | 8.4:-584073 | MS.gene074603:CDS |
| AGGGAAATCACAGGATCAGA+GGG | 0.612491 | 8.4:-584351 | MS.gene074603:CDS |
| CGCGTGACCACTTTGCATGG+AGG | 0.615726 | 8.4:-584371 | MS.gene074603:CDS |
| AAAACAGTGTCATTTCGCCT+AGG | 0.628001 | 8.4:+584005 | None:intergenic |
| CAAACCAGAGAATGAAGATG+AGG | 0.629792 | 8.4:-584687 | MS.gene074603:CDS |
| TGATTTCCCTCCATGCAAAG+TGG | 0.631438 | 8.4:+584364 | None:intergenic |
| TTTGCATGGAGGGAAATCAC+AGG | 0.635122 | 8.4:-584360 | MS.gene074603:CDS |
| CAGTGCTACCATGCCTCCTG+CGG | 0.636466 | 8.4:-584624 | MS.gene074603:CDS |
| ACAGTGTCATTTCGCCTAGG+TGG | 0.641491 | 8.4:+584008 | None:intergenic |
| TCTTGCTAAGAATTTGGACA+AGG | 0.643179 | 8.4:-584402 | MS.gene074603:CDS |
| TGGTATTGACATTCCTGATG+TGG | 0.647427 | 8.4:-584261 | MS.gene074603:CDS |
| TACCTATAGTCACGACAACA+GGG | 0.648496 | 8.4:+584570 | None:intergenic |
| CTATTCCCGACAGACCACCT+AGG | 0.700511 | 8.4:-584022 | MS.gene074603:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATTTTCTTGCTAAGAATT+TGG | - | chr8.4:584297-584316 | MS.gene074603:CDS | 25.0% |
| AACAAGCACATTATATCTCT+TGG | + | chr8.4:584404-584423 | None:intergenic | 30.0% | |
| TTATAAGCTTCAGAGATTGT+TGG | - | chr8.4:584222-584241 | MS.gene074603:CDS | 30.0% | |
| TTATCAACTATGATATGCCT+GGG | - | chr8.4:584473-584492 | MS.gene074603:CDS | 30.0% | |
| TTGATGAGAAGAGGATTTAT+AGG | - | chr8.4:584044-584063 | MS.gene074603:CDS | 30.0% | |
| !! | AGATTAGTCTTGAAGGATTT+AGG | - | chr8.4:584377-584396 | MS.gene074603:CDS | 30.0% |
| AAATGTACACCCATCGTATT+GGG | - | chr8.4:584503-584522 | MS.gene074603:CDS | 35.0% | |
| GTGTACATTTCAATATTCCC+AGG | + | chr8.4:584493-584512 | None:intergenic | 35.0% | |
| GTTATCAACTATGATATGCC+TGG | - | chr8.4:584472-584491 | MS.gene074603:CDS | 35.0% | |
| TCTTGCTAAGAATTTGGACA+AGG | - | chr8.4:584303-584322 | MS.gene074603:CDS | 35.0% | |
| ! | AATAGATCCTGGCTTGAATT+TGG | + | chr8.4:584668-584687 | None:intergenic | 35.0% |
| ! | TCTGGTTTGAGATTACTAGA+AGG | + | chr8.4:584007-584026 | None:intergenic | 35.0% |
| AAGAAAATCAGCGCTCTTCT+TGG | + | chr8.4:584287-584306 | None:intergenic | 40.0% | |
| AGTTCCTCATCTTCATTCTC+TGG | + | chr8.4:584025-584044 | None:intergenic | 40.0% | |
| ATGAGGAACTTGATGAGAAG+AGG | - | chr8.4:584035-584054 | MS.gene074603:CDS | 40.0% | |
| CAAACCAGAGAATGAAGATG+AGG | - | chr8.4:584018-584037 | MS.gene074603:CDS | 40.0% | |
| CTTTCATCATGATCACATGC+TGG | + | chr8.4:584189-584208 | None:intergenic | 40.0% | |
| GAAATGTACACCCATCGTAT+TGG | - | chr8.4:584502-584521 | MS.gene074603:CDS | 40.0% | |
| GCTAAGAATTTGGACAAGGA+AGG | - | chr8.4:584307-584326 | MS.gene074603:CDS | 40.0% | |
| TACAACATTCCTGACTCTTC+AGG | - | chr8.4:584558-584577 | MS.gene074603:CDS | 40.0% | |
| TACCTATAGTCACGACAACA+GGG | + | chr8.4:584138-584157 | None:intergenic | 40.0% | |
| ! | TTGATAACATGAGCCACATC+AGG | + | chr8.4:584460-584479 | None:intergenic | 40.0% |
| !! | AAAACAGTGTCATTTCGCCT+AGG | + | chr8.4:584703-584722 | None:intergenic | 40.0% |
| !! | GGCTTGCTAGAAAGTATTTG+AGG | - | chr8.4:584110-584129 | MS.gene074603:CDS | 40.0% |
| !! | TGGTATTGACATTCCTGATG+TGG | - | chr8.4:584444-584463 | MS.gene074603:CDS | 40.0% |
| AACCCTGTTGTCGTGACTAT+AGG | - | chr8.4:584133-584152 | MS.gene074603:CDS | 45.0% | |
| AGGGAAATCACAGGATCAGA+GGG | - | chr8.4:584354-584373 | MS.gene074603:CDS | 45.0% | |
| CTTGTTGCAACTGATGTTGC+TGG | - | chr8.4:584418-584437 | MS.gene074603:CDS | 45.0% | |
| GAAGCTTCCAAATTCAAGCC+AGG | - | chr8.4:584658-584677 | MS.gene074603:CDS | 45.0% | |
| GTACCTATAGTCACGACAAC+AGG | + | chr8.4:584139-584158 | None:intergenic | 45.0% | |
| TGATTTCCCTCCATGCAAAG+TGG | + | chr8.4:584344-584363 | None:intergenic | 45.0% | |
| TTTGCATGGAGGGAAATCAC+AGG | - | chr8.4:584345-584364 | MS.gene074603:CDS | 45.0% | |
| !! | CAGAGGGAGATTAGTCTTGA+AGG | - | chr8.4:584370-584389 | MS.gene074603:CDS | 45.0% |
| ACCAGTACGCCCAATACGAT+GGG | + | chr8.4:584515-584534 | None:intergenic | 50.0% | |
| ATTTCGCCTAGGTGGTCTGT+CGG | + | chr8.4:584692-584711 | None:intergenic | 50.0% | |
| CAGTCCTGTTCCACCTGAAT+TGG | - | chr8.4:584627-584646 | MS.gene074603:CDS | 50.0% | |
| CATCAGTGTCCTGAAGAGTC+AGG | + | chr8.4:584570-584589 | None:intergenic | 50.0% | |
| CTGTTCCACCTGAATTGGCA+AGG | - | chr8.4:584632-584651 | MS.gene074603:CDS | 50.0% | |
| CTTGCCAATTCAGGTGGAAC+AGG | + | chr8.4:584634-584653 | None:intergenic | 50.0% | |
| GAGGGAAATCACAGGATCAG+AGG | - | chr8.4:584353-584372 | MS.gene074603:CDS | 50.0% | |
| GCTTCATGCCTTGCCAATTC+AGG | + | chr8.4:584643-584662 | None:intergenic | 50.0% | |
| TACTGGTCGTGCAGGAAAGA+CGG | - | chr8.4:584528-584547 | MS.gene074603:CDS | 50.0% | |
| TATCGCGTGACCACTTTGCA+TGG | - | chr8.4:584331-584350 | MS.gene074603:CDS | 50.0% | |
| TCATGCCTTGCCAATTCAGG+TGG | + | chr8.4:584640-584659 | None:intergenic | 50.0% | |
| ! | GTCGTGACTATAGGTACTGC+TGG | - | chr8.4:584142-584161 | MS.gene074603:CDS | 50.0% |
| !! | ACAGTGTCATTTCGCCTAGG+TGG | + | chr8.4:584700-584719 | None:intergenic | 50.0% |
| ACCCATCGTATTGGGCGTAC+TGG | - | chr8.4:584511-584530 | MS.gene074603:CDS | 55.0% | |
| ACTGGTCGTGCAGGAAAGAC+GGG | - | chr8.4:584529-584548 | MS.gene074603:CDS | 55.0% | |
| CTATTCCCGACAGACCACCT+AGG | - | chr8.4:584683-584702 | MS.gene074603:CDS | 55.0% | |
| GACCAGTACGCCCAATACGA+TGG | + | chr8.4:584516-584535 | None:intergenic | 55.0% | |
| GCAACTGATGTTGCTGGACG+TGG | - | chr8.4:584424-584443 | MS.gene074603:CDS | 55.0% | |
| GCGTGACCACTTTGCATGGA+GGG | - | chr8.4:584335-584354 | MS.gene074603:CDS | 55.0% | |
| GGTCTGTCGGGAATAGATCC+TGG | + | chr8.4:584679-584698 | None:intergenic | 55.0% | |
| TTTCGCCTAGGTGGTCTGTC+GGG | + | chr8.4:584691-584710 | None:intergenic | 55.0% | |
| CAGTGCTACCATGCCTCCTG+CGG | - | chr8.4:584081-584100 | MS.gene074603:CDS | 60.0% | |
| CGCGTGACCACTTTGCATGG+AGG | - | chr8.4:584334-584353 | MS.gene074603:CDS | 60.0% | |
| TCGTGCAGGAAAGACGGGTG+TGG | - | chr8.4:584534-584553 | MS.gene074603:CDS | 60.0% | |
| ! | ATTGGGCGTACTGGTCGTGC+AGG | - | chr8.4:584520-584539 | MS.gene074603:CDS | 60.0% |
| CTAGCAAGCCTCTCCACCGC+AGG | + | chr8.4:584100-584119 | None:intergenic | 65.0% | |
| TGCTACCATGCCTCCTGCGG+TGG | - | chr8.4:584084-584103 | MS.gene074603:CDS | 65.0% | |
| CCATGCCTCCTGCGGTGGAG+AGG | - | chr8.4:584089-584108 | MS.gene074603:CDS | 70.0% | |
| CCTCTCCACCGCAGGAGGCA+TGG | + | chr8.4:584092-584111 | None:intergenic | 70.0% | |
| GCAAGCCTCTCCACCGCAGG+AGG | + | chr8.4:584097-584116 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 583983 | 584744 | 583983 | ID=MS.gene074603 |
| chr8.4 | mRNA | 583983 | 584744 | 583983 | ID=MS.gene074603.t1;Parent=MS.gene074603 |
| chr8.4 | exon | 583983 | 584744 | 583983 | ID=MS.gene074603.t1.exon1;Parent=MS.gene074603.t1 |
| chr8.4 | CDS | 583983 | 584744 | 583983 | ID=cds.MS.gene074603.t1;Parent=MS.gene074603.t1 |
| Gene Sequence |
| Protein sequence |
