Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21013.t1 | XP_013469071.1 | 96.3 | 590 | 16 | 3 | 1 | 587 | 1 | 587 | 0.00E+00 | 1078.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21013.t1 | Q8W4E7 | 64.2 | 592 | 202 | 5 | 1 | 585 | 7 | 595 | 2.1e-196 | 686.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21013.t1 | A0A072VM68 | 96.3 | 590 | 16 | 3 | 1 | 587 | 1 | 587 | 0.0e+00 | 1078.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene21013 | 0.827768 | 1.30E-54 | -1.69E-46 |
| MS.gene049356 | MS.gene21013 | 0.802688 | 4.98E-49 | -1.69E-46 |
| MS.gene049369 | MS.gene21013 | 0.819224 | 1.30E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene21013 | 0.819773 | 9.74E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene21013 | 0.809896 | 1.51E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene21013 | 0.805395 | 1.36E-49 | -1.69E-46 |
| MS.gene049757 | MS.gene21013 | 0.804622 | 1.98E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene21013 | 0.826754 | 2.28E-54 | -1.69E-46 |
| MS.gene050426 | MS.gene21013 | -0.805489 | 1.30E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene21013 | 0.845203 | 4.70E-59 | -1.69E-46 |
| MS.gene050812 | MS.gene21013 | 0.847754 | 9.46E-60 | -1.69E-46 |
| MS.gene05081 | MS.gene21013 | 0.826974 | 2.02E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene21013 | 0.845568 | 3.75E-59 | -1.69E-46 |
| MS.gene051666 | MS.gene21013 | 0.839758 | 1.31E-57 | -1.69E-46 |
| MS.gene051734 | MS.gene21013 | 0.842015 | 3.35E-58 | -1.69E-46 |
| MS.gene051838 | MS.gene21013 | 0.835351 | 1.76E-56 | -1.69E-46 |
| MS.gene052134 | MS.gene21013 | 0.82832 | 9.60E-55 | -1.69E-46 |
| MS.gene052135 | MS.gene21013 | 0.825951 | 3.54E-54 | -1.69E-46 |
| MS.gene052136 | MS.gene21013 | 0.832742 | 7.95E-56 | -1.69E-46 |
| MS.gene052188 | MS.gene21013 | 0.868354 | 6.95E-66 | -1.69E-46 |
| MS.gene052253 | MS.gene21013 | 0.818625 | 1.78E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene21013 | 0.828671 | 7.90E-55 | -1.69E-46 |
| MS.gene052322 | MS.gene21013 | 0.811094 | 8.31E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene21013 | 0.837063 | 6.48E-57 | -1.69E-46 |
| MS.gene052414 | MS.gene21013 | 0.868721 | 5.29E-66 | -1.69E-46 |
| MS.gene052421 | MS.gene21013 | 0.807636 | 4.59E-50 | -1.69E-46 |
| MS.gene052469 | MS.gene21013 | 0.830991 | 2.15E-55 | -1.69E-46 |
| MS.gene052481 | MS.gene21013 | 0.823934 | 1.06E-53 | -1.69E-46 |
| MS.gene052484 | MS.gene21013 | 0.814655 | 1.38E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene21013 | 0.820765 | 5.77E-53 | -1.69E-46 |
| MS.gene052501 | MS.gene21013 | 0.813107 | 3.03E-51 | -1.69E-46 |
| MS.gene052505 | MS.gene21013 | 0.805809 | 1.12E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene21013 | 0.808909 | 2.46E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene21013 | 0.815471 | 9.09E-52 | -1.69E-46 |
| MS.gene052982 | MS.gene21013 | 0.802434 | 5.62E-49 | -1.69E-46 |
| MS.gene053758 | MS.gene21013 | 0.828993 | 6.60E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene21013 | 0.822576 | 2.20E-53 | -1.69E-46 |
| MS.gene053912 | MS.gene21013 | 0.837064 | 6.48E-57 | -1.69E-46 |
| MS.gene053916 | MS.gene21013 | 0.802028 | 6.81E-49 | -1.69E-46 |
| MS.gene054349 | MS.gene21013 | 0.828533 | 8.53E-55 | -1.69E-46 |
| MS.gene054884 | MS.gene21013 | -0.841188 | 5.53E-58 | -1.69E-46 |
| MS.gene05494 | MS.gene21013 | 0.800124 | 1.67E-48 | -1.69E-46 |
| MS.gene05505 | MS.gene21013 | 0.806136 | 9.52E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene21013 | 0.831704 | 1.44E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene21013 | 0.807996 | 3.85E-50 | -1.69E-46 |
| MS.gene055289 | MS.gene21013 | 0.813561 | 2.41E-51 | -1.69E-46 |
| MS.gene055539 | MS.gene21013 | 0.872501 | 3.03E-67 | -1.69E-46 |
| MS.gene05553 | MS.gene21013 | 0.802343 | 5.87E-49 | -1.69E-46 |
| MS.gene055741 | MS.gene21013 | 0.846933 | 1.59E-59 | -1.69E-46 |
| MS.gene055744 | MS.gene21013 | 0.849172 | 3.83E-60 | -1.69E-46 |
| MS.gene056166 | MS.gene21013 | 0.804826 | 1.79E-49 | -1.69E-46 |
| MS.gene056283 | MS.gene21013 | 0.822003 | 2.99E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene21013 | 0.81336 | 2.66E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene21013 | 0.802081 | 6.64E-49 | -1.69E-46 |
| MS.gene05664 | MS.gene21013 | 0.814297 | 1.65E-51 | -1.69E-46 |
| MS.gene056659 | MS.gene21013 | 0.8089 | 2.47E-50 | -1.69E-46 |
| MS.gene05666 | MS.gene21013 | 0.800763 | 1.24E-48 | -1.69E-46 |
| MS.gene056897 | MS.gene21013 | 0.819934 | 8.95E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene21013 | 0.826688 | 2.36E-54 | -1.69E-46 |
| MS.gene057124 | MS.gene21013 | 0.836878 | 7.23E-57 | -1.69E-46 |
| MS.gene057396 | MS.gene21013 | 0.830123 | 3.51E-55 | -1.69E-46 |
| MS.gene057658 | MS.gene21013 | 0.805847 | 1.10E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene21013 | 0.826427 | 2.73E-54 | -1.69E-46 |
| MS.gene057749 | MS.gene21013 | 0.825628 | 4.23E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene21013 | 0.828475 | 8.81E-55 | -1.69E-46 |
| MS.gene057856 | MS.gene21013 | 0.805338 | 1.40E-49 | -1.69E-46 |
| MS.gene058007 | MS.gene21013 | 0.844805 | 6.02E-59 | -1.69E-46 |
| MS.gene058082 | MS.gene21013 | 0.80006 | 1.72E-48 | -1.69E-46 |
| MS.gene058090 | MS.gene21013 | 0.811526 | 6.70E-51 | -1.69E-46 |
| MS.gene058120 | MS.gene21013 | 0.834878 | 2.32E-56 | -1.69E-46 |
| MS.gene058376 | MS.gene21013 | 0.83018 | 3.39E-55 | -1.69E-46 |
| MS.gene058444 | MS.gene21013 | 0.843129 | 1.69E-58 | -1.69E-46 |
| MS.gene058700 | MS.gene21013 | 0.802595 | 5.21E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene21013 | 0.824561 | 7.55E-54 | -1.69E-46 |
| MS.gene058928 | MS.gene21013 | 0.83797 | 3.80E-57 | -1.69E-46 |
| MS.gene058948 | MS.gene21013 | 0.804783 | 1.83E-49 | -1.69E-46 |
| MS.gene059011 | MS.gene21013 | 0.808801 | 2.59E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene21013 | 0.8088 | 2.59E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene21013 | 0.82244 | 2.37E-53 | -1.69E-46 |
| MS.gene059455 | MS.gene21013 | 0.806225 | 9.12E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene21013 | 0.832297 | 1.02E-55 | -1.69E-46 |
| MS.gene059692 | MS.gene21013 | 0.819883 | 9.19E-53 | -1.69E-46 |
| MS.gene059695 | MS.gene21013 | 0.82771 | 1.35E-54 | -1.69E-46 |
| MS.gene059717 | MS.gene21013 | 0.840825 | 6.89E-58 | -1.69E-46 |
| MS.gene060407 | MS.gene21013 | 0.812211 | 4.75E-51 | -1.69E-46 |
| MS.gene060717 | MS.gene21013 | 0.810636 | 1.04E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene21013 | 0.813696 | 2.25E-51 | -1.69E-46 |
| MS.gene060818 | MS.gene21013 | 0.80133 | 9.47E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene21013 | 0.807946 | 3.94E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene21013 | 0.807095 | 5.98E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene21013 | 0.811633 | 6.35E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene21013 | 0.820481 | 6.70E-53 | -1.69E-46 |
| MS.gene061231 | MS.gene21013 | 0.855627 | 5.56E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21013.t1 | MTR_1g084140 | 96.271 | 590 | 16 | 3 | 1 | 587 | 1 | 587 | 0.0 | 1135 |
| MS.gene21013.t1 | MTR_4g013240 | 25.159 | 473 | 286 | 15 | 141 | 567 | 30 | 480 | 8.19e-23 | 102 |
| MS.gene21013.t1 | MTR_4g013245 | 23.990 | 421 | 268 | 13 | 162 | 545 | 11 | 416 | 4.14e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21013.t1 | AT5G26820 | 64.189 | 592 | 202 | 5 | 1 | 585 | 7 | 595 | 0.0 | 728 |
| MS.gene21013.t1 | AT5G03570 | 23.819 | 487 | 318 | 13 | 114 | 559 | 5 | 479 | 2.49e-19 | 92.0 |
| MS.gene21013.t1 | AT5G03570 | 23.819 | 487 | 318 | 13 | 114 | 559 | 5 | 479 | 2.49e-19 | 92.0 |
| MS.gene21013.t1 | AT5G03570 | 24.083 | 436 | 282 | 10 | 156 | 559 | 16 | 434 | 2.57e-18 | 88.6 |
| MS.gene21013.t1 | AT5G03570 | 22.461 | 512 | 320 | 13 | 114 | 559 | 5 | 505 | 1.09e-16 | 84.0 |
Find 131 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGATTACAGGATGAAATT+TGG | 0.168385 | 1.3:+59880267 | None:intergenic |
| GCAAACGATCCTTCTCATTT+TGG | 0.171545 | 1.3:-59877599 | MS.gene21013:CDS |
| AAGCTTTGTGGTGTGGCTTT+GGG | 0.232750 | 1.3:-59880742 | MS.gene21013:CDS |
| TCCCTTGGTTGGCAAATTAA+TGG | 0.247945 | 1.3:-59881011 | MS.gene21013:CDS |
| TCGACTCTGGTCAAGCAATT+TGG | 0.274301 | 1.3:-59879395 | MS.gene21013:CDS |
| GAAGCTTTGTGGTGTGGCTT+TGG | 0.281406 | 1.3:-59880743 | MS.gene21013:CDS |
| TAAAATCAATACTGATATTC+TGG | 0.298842 | 1.3:-59881958 | MS.gene21013:CDS |
| GCACACCCTGCTGGGTTATA+TGG | 0.319471 | 1.3:-59881741 | MS.gene21013:intron |
| GCGTCCATGGTTTGTCGTAT+TGG | 0.321719 | 1.3:-59880785 | MS.gene21013:CDS |
| GCTACTCCGGCACACCCTGC+TGG | 0.330733 | 1.3:-59881750 | MS.gene21013:CDS |
| CACAGCTGACAGGAGTTAAT+AGG | 0.336528 | 1.3:-59880602 | MS.gene21013:intron |
| AACAGAGAACTTACTGTAAC+AGG | 0.338783 | 1.3:+59880208 | None:intergenic |
| TAACTACTTAACTGTCATTC+AGG | 0.341515 | 1.3:-59880963 | MS.gene21013:intron |
| CCAGGCTGGGGCAGTTGGGT+TGG | 0.341613 | 1.3:-59879265 | MS.gene21013:intron |
| CAACAGGTTTGTGATGGTTT+AGG | 0.341872 | 1.3:+59880051 | None:intergenic |
| TTAATCGGCACAGGACATTC+AGG | 0.342423 | 1.3:+59881978 | None:intergenic |
| ATCTGCTTAAAAGTTGCTTC+TGG | 0.348836 | 1.3:-59880250 | MS.gene21013:CDS |
| TACTGATATACAATTGGAAT+TGG | 0.354236 | 1.3:-59882048 | MS.gene21013:CDS |
| AGAAGTTGCTGTTGCAAGTC+TGG | 0.361361 | 1.3:-59877654 | MS.gene21013:CDS |
| GGGGCGCAAATTATCCAAAC+TGG | 0.362063 | 1.3:-59877713 | MS.gene21013:CDS |
| GGGTTGCAAATGAGCGTGAC+TGG | 0.367569 | 1.3:-59880720 | MS.gene21013:CDS |
| CTCTTGCCAGTTGCTGTGGT+GGG | 0.374283 | 1.3:-59881067 | MS.gene21013:CDS |
| TCCATCATTGGAGGATTTAG+TGG | 0.389879 | 1.3:-59879458 | MS.gene21013:CDS |
| AATTACCTGTGAGAGATAGA+AGG | 0.396651 | 1.3:+59882196 | None:intergenic |
| GGTGAAATGGATGAGATTAA+AGG | 0.396708 | 1.3:+59882294 | None:intergenic |
| TTTGTCGTATTGGTTTCAGC+TGG | 0.397742 | 1.3:-59880775 | MS.gene21013:CDS |
| AACGAATACTGATATACAAT+TGG | 0.400757 | 1.3:-59882054 | MS.gene21013:CDS |
| AAGAAACCCACCACAGCAAC+TGG | 0.408080 | 1.3:+59881061 | None:intergenic |
| CTACATTGCTTCTGCGTCCA+TGG | 0.410181 | 1.3:-59880798 | MS.gene21013:CDS |
| AACATTCGTGTCTTCGACTC+TGG | 0.414974 | 1.3:-59879408 | MS.gene21013:CDS |
| AGATAGAAGGGTAGTAATTG+AGG | 0.418181 | 1.3:+59882209 | None:intergenic |
| TGGATGATGGGATCCCAGTT+TGG | 0.424363 | 1.3:+59877699 | None:intergenic |
| ATAGCTGGAGCATTGCTGTT+TGG | 0.430015 | 1.3:-59880301 | MS.gene21013:CDS |
| TGGTGGAAAACCAGTTGTTA+AGG | 0.430182 | 1.3:-59879916 | MS.gene21013:intron |
| ACTAAAGTGGCTATAATTGT+TGG | 0.430851 | 1.3:-59881037 | MS.gene21013:CDS |
| ATGAGATTTGCTTTGGATGA+TGG | 0.434327 | 1.3:+59877686 | None:intergenic |
| AGTTGCTTCTGGCTTAATGA+TGG | 0.436477 | 1.3:-59880239 | MS.gene21013:CDS |
| CAGGATGAAATTTGGAAAGA+AGG | 0.437395 | 1.3:+59880275 | None:intergenic |
| TTTGCTTGTGCAAGTGCGAC+TGG | 0.446486 | 1.3:+59880579 | None:intergenic |
| TATAATTGTTGGTGGTCCCT+TGG | 0.449655 | 1.3:-59881026 | MS.gene21013:CDS |
| CCTCTTGCCAGTTGCTGTGG+TGG | 0.452842 | 1.3:-59881068 | MS.gene21013:CDS |
| AGTCCCGATGAGATTTGCTT+TGG | 0.459197 | 1.3:+59877679 | None:intergenic |
| TTGTCGTATTGGTTTCAGCT+GGG | 0.460813 | 1.3:-59880774 | MS.gene21013:CDS |
| GGCTTACATCCATCCATCAT+TGG | 0.464689 | 1.3:-59879470 | MS.gene21013:CDS |
| TTCATCGAATGATCTGCAAC+AGG | 0.464699 | 1.3:+59880035 | None:intergenic |
| AAGAAGGAGGAATGGTGAAA+TGG | 0.466110 | 1.3:+59882281 | None:intergenic |
| CAGCATGGATGTTCTGTAGA+TGG | 0.466645 | 1.3:-59877538 | MS.gene21013:CDS |
| AGCTTTGTGGTGTGGCTTTG+GGG | 0.469755 | 1.3:-59880741 | MS.gene21013:CDS |
| GGTGGAAAACCAGTTGTTAA+GGG | 0.471640 | 1.3:-59879915 | MS.gene21013:intron |
| GCATCAGATGCTGACAGTAT+AGG | 0.471700 | 1.3:-59880006 | MS.gene21013:intron |
| GGGGCTATTGAGAAGCTTTG+TGG | 0.472566 | 1.3:-59880754 | MS.gene21013:CDS |
| TTTCTACCGGCGTTCTTGAC+CGG | 0.483139 | 1.3:-59880074 | MS.gene21013:CDS |
| TCCACTAAATCCTCCAATGA+TGG | 0.486598 | 1.3:+59879457 | None:intergenic |
| AAAACCAGTTGTTAAGGGTC+TGG | 0.491610 | 1.3:-59879910 | MS.gene21013:intron |
| TGAGATTTGCTTTGGATGAT+GGG | 0.493099 | 1.3:+59877687 | None:intergenic |
| CTCGGCTGGAAAGAGTATCT+TGG | 0.496656 | 1.3:-59879876 | MS.gene21013:CDS |
| GGTTTATTTCCACAGCTGAC+AGG | 0.500274 | 1.3:-59880612 | MS.gene21013:intron |
| CTACTCCGGCACACCCTGCT+GGG | 0.504482 | 1.3:-59881749 | MS.gene21013:CDS |
| TGGAAGCTATCAAGCTCGGC+TGG | 0.508035 | 1.3:-59879890 | MS.gene21013:CDS |
| CATCCAAAGCAAATCTCATC+GGG | 0.512204 | 1.3:-59877682 | MS.gene21013:CDS |
| ATCCATTAATTTGCCAACCA+AGG | 0.515430 | 1.3:+59881009 | None:intergenic |
| ATTGTTGGTGGTCCCTTGGT+TGG | 0.518606 | 1.3:-59881022 | MS.gene21013:CDS |
| GCAATACTAGCAGGAAGGAC+TGG | 0.519217 | 1.3:+59879849 | None:intergenic |
| GGTGGGTTTCTTCACTAAAG+TGG | 0.522472 | 1.3:-59881050 | MS.gene21013:CDS |
| TCAAGCTTTATTTCTCAGCA+TGG | 0.524182 | 1.3:-59879238 | MS.gene21013:CDS |
| ATCCCACCATATAACCCAGC+AGG | 0.525279 | 1.3:+59881735 | None:intergenic |
| AAGCCTCTTGCCAGTTGCTG+TGG | 0.527013 | 1.3:-59881071 | MS.gene21013:CDS |
| TCCTTCCTGCTAGTATTGCG+TGG | 0.529013 | 1.3:-59879845 | MS.gene21013:CDS |
| TATTGAGAAGCTTTGTGGTG+TGG | 0.529833 | 1.3:-59880749 | MS.gene21013:CDS |
| TAGTTATATGCAGGAACTCT+CGG | 0.530737 | 1.3:+59880980 | None:intergenic |
| TTACAATCAGAAACAAGAAA+AGG | 0.537721 | 1.3:+59879166 | None:intergenic |
| AACGCCGGTAGAAAGCTTGT+TGG | 0.538024 | 1.3:+59880083 | None:intergenic |
| ACAGTTAAGTAGTTATATGC+AGG | 0.538293 | 1.3:+59880971 | None:intergenic |
| GGTTGATGCGAGAAAGAAGG+AGG | 0.539493 | 1.3:+59882268 | None:intergenic |
| GTTGCTTCTGGCTTAATGAT+GGG | 0.540232 | 1.3:-59880238 | MS.gene21013:CDS |
| ATGCGAGAAAGAAGGAGGAA+TGG | 0.541534 | 1.3:+59882273 | None:intergenic |
| TCCATTAATTTGCCAACCAA+GGG | 0.541697 | 1.3:+59881010 | None:intergenic |
| AATGTTGTCTCTTCTATCAG+TGG | 0.542189 | 1.3:-59877567 | MS.gene21013:CDS |
| TGAGCGTGACTGGGTTGTGC+TGG | 0.542195 | 1.3:-59880710 | MS.gene21013:intron |
| TTAACCAACAAGCTTTCTAC+CGG | 0.542347 | 1.3:-59880087 | MS.gene21013:CDS |
| TATAACCCAGCAGGGTGTGC+CGG | 0.542542 | 1.3:+59881744 | None:intergenic |
| GAAGGTTGATGCGAGAAAGA+AGG | 0.545398 | 1.3:+59882265 | None:intergenic |
| TTGTCTCTTCTATCAGTGGT+TGG | 0.547810 | 1.3:-59877563 | MS.gene21013:CDS |
| ACATGTCATATGATGTCGTA+GGG | 0.548784 | 1.3:-59877733 | MS.gene21013:CDS |
| CTAAATCCTCCAATGATGGA+TGG | 0.550468 | 1.3:+59879461 | None:intergenic |
| TTCAATATTGTTCTTACACC+AGG | 0.554964 | 1.3:-59879810 | MS.gene21013:CDS |
| AGCACCCACGCAATACTAGC+AGG | 0.557563 | 1.3:+59879840 | None:intergenic |
| ACATGTTCTTGCAGCTACTC+CGG | 0.558596 | 1.3:-59881763 | MS.gene21013:CDS |
| CAAGAGGCTTGAATGAATCA+AGG | 0.559351 | 1.3:+59881084 | None:intergenic |
| GCTTTGTGGTGTGGCTTTGG+GGG | 0.562182 | 1.3:-59880740 | MS.gene21013:CDS |
| ATTACCTGTGAGAGATAGAA+GGG | 0.562282 | 1.3:+59882197 | None:intergenic |
| CTGGCAGAGTCTCTAATGCT+TGG | 0.562890 | 1.3:-59877635 | MS.gene21013:CDS |
| CCTTCCTGCTAGTATTGCGT+GGG | 0.565115 | 1.3:-59879844 | MS.gene21013:CDS |
| AGAAACAAGAAAAGGAGAAG+AGG | 0.569930 | 1.3:+59879174 | None:intergenic |
| TGAATCAAGGCAATGGCAGA+AGG | 0.572956 | 1.3:+59881097 | None:intergenic |
| TATCAGTGGTTGGTGCAGCA+TGG | 0.573779 | 1.3:-59877553 | MS.gene21013:CDS |
| TCATCCAAAGCAAATCTCAT+CGG | 0.577100 | 1.3:-59877683 | MS.gene21013:CDS |
| CGATAGCGTAATCTCGAAGA+AGG | 0.580595 | 1.3:+59882247 | None:intergenic |
| AATGCTGTCATCAAACTGCC+TGG | 0.581730 | 1.3:+59879792 | None:intergenic |
| GGTTGCAAATGAGCGTGACT+GGG | 0.583770 | 1.3:-59880719 | MS.gene21013:CDS |
| TGTCGTATTGGTTTCAGCTG+GGG | 0.584794 | 1.3:-59880773 | MS.gene21013:CDS |
| GCTAAACATCCAAAATGAGA+AGG | 0.588441 | 1.3:+59877590 | None:intergenic |
| AAAGTGGCTATAATTGTTGG+TGG | 0.593039 | 1.3:-59881034 | MS.gene21013:CDS |
| AATCAATACTGATATTCTGG+TGG | 0.598210 | 1.3:-59881955 | MS.gene21013:CDS |
| AGGTTTGTGATGGTTTAGGC+CGG | 0.604701 | 1.3:+59880055 | None:intergenic |
| GAAACCAATACGACAAACCA+TGG | 0.610451 | 1.3:+59880781 | None:intergenic |
| ACTACCCTTCTATCTCTCAC+AGG | 0.618844 | 1.3:-59882201 | MS.gene21013:intron |
| GCTTGAATGAATCAAGGCAA+TGG | 0.619193 | 1.3:+59881090 | None:intergenic |
| TTACATCCATCCATCATTGG+AGG | 0.619549 | 1.3:-59879467 | MS.gene21013:CDS |
| TCGAATTGATCTGTTATCTG+AGG | 0.619996 | 1.3:-59880544 | MS.gene21013:intron |
| GAAATGGATGAGATTAAAGG+TGG | 0.620496 | 1.3:+59882297 | None:intergenic |
| GGTCTGGAAGCTATCAAGCT+CGG | 0.620628 | 1.3:-59879894 | MS.gene21013:CDS |
| CACATGTCATATGATGTCGT+AGG | 0.620963 | 1.3:-59877734 | MS.gene21013:CDS |
| GATCTGCAACAGGTTTGTGA+TGG | 0.622696 | 1.3:+59880045 | None:intergenic |
| CCACCACAGCAACTGGCAAG+AGG | 0.629861 | 1.3:+59881068 | None:intergenic |
| GGGCGCAAATTATCCAAACT+GGG | 0.634115 | 1.3:-59877712 | MS.gene21013:CDS |
| AGCAATGTAGACACTGAAGT+AGG | 0.635319 | 1.3:+59880811 | None:intergenic |
| CCCACGCAATACTAGCAGGA+AGG | 0.637832 | 1.3:+59879844 | None:intergenic |
| GCTGTTGCTGTATATATGAG+TGG | 0.644425 | 1.3:-59879216 | MS.gene21013:CDS |
| AAATGGATGAGATTAAAGGT+GGG | 0.649189 | 1.3:+59882298 | None:intergenic |
| AATGTAGACACTGAAGTAGG+AGG | 0.659268 | 1.3:+59880814 | None:intergenic |
| TTTAGGCCGGTCAAGAACGC+CGG | 0.663850 | 1.3:+59880068 | None:intergenic |
| TTACATAAATATCAAAACTG+AGG | 0.665722 | 1.3:+59877470 | None:intergenic |
| AGACACTGAAGTAGGAGGCA+CGG | 0.667896 | 1.3:+59880819 | None:intergenic |
| TCCCACCATATAACCCAGCA+GGG | 0.668296 | 1.3:+59881736 | None:intergenic |
| TGTCAAGACAGTATCTACAA+AGG | 0.690460 | 1.3:+59881899 | None:intergenic |
| AGCTGCTGATAGTAACTGAG+TGG | 0.693450 | 1.3:+59880861 | None:intergenic |
| CAAGACAGTATCTACAAAGG+CGG | 0.696073 | 1.3:+59881902 | None:intergenic |
| GGAATTGGATCATGTAAACG+AGG | 0.696890 | 1.3:-59882033 | MS.gene21013:CDS |
| CATGTCATATGATGTCGTAG+GGG | 0.709264 | 1.3:-59877732 | MS.gene21013:CDS |
| GTAAACGAGGATACGAGTGA+AGG | 0.710150 | 1.3:-59882020 | MS.gene21013:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATAAATAATATGCAATTT+GGG | + | chr1.3:59881921-59881940 | None:intergenic | 15.0% |
| !! | TAATTATTTATGATTCTTAG+TGG | - | chr1.3:59879161-59879180 | MS.gene21013:intron | 15.0% |
| !! | TGAATAAATAATATGCAATT+TGG | + | chr1.3:59881922-59881941 | None:intergenic | 15.0% |
| !! | TTGAAAATAAAGAATTTACA+AGG | + | chr1.3:59881720-59881739 | None:intergenic | 15.0% |
| !!! | AAAATAGAATGATTGATTTT+AGG | + | chr1.3:59878906-59878925 | None:intergenic | 15.0% |
| !!! | ATATCAGTATTGATTTTAAT+CGG | + | chr1.3:59877834-59877853 | None:intergenic | 15.0% |
| !!! | TAAAAGTATGTTAATTAACT+TGG | + | chr1.3:59879287-59879306 | None:intergenic | 15.0% |
| !!! | TTTTTCAAAGGAAAAATAAT+TGG | + | chr1.3:59880852-59880871 | None:intergenic | 15.0% |
| !! | AAAAATAAAAGTGATCCAAA+AGG | - | chr1.3:59881011-59881030 | MS.gene21013:CDS | 20.0% |
| !! | AAAATAAAAGTGATCCAAAA+GGG | - | chr1.3:59881012-59881031 | MS.gene21013:CDS | 20.0% |
| !! | AAATAAATTAGTGACCTAAA+TGG | - | chr1.3:59881649-59881668 | MS.gene21013:intron | 20.0% |
| !! | AACATTGCAAATTGTTTATA+GGG | - | chr1.3:59881363-59881382 | MS.gene21013:intron | 20.0% |
| !! | AATGTGCATTATATATTTGA+TGG | - | chr1.3:59881143-59881162 | MS.gene21013:CDS | 20.0% |
| !! | ACAATTCAGTAACTTATAAA+TGG | + | chr1.3:59877651-59877670 | None:intergenic | 20.0% |
| !! | ATAGAGAAAATACAAAGTTA+TGG | - | chr1.3:59881085-59881104 | MS.gene21013:CDS | 20.0% |
| !! | ATTACATATATATAGAGCAA+TGG | + | chr1.3:59878312-59878331 | None:intergenic | 20.0% |
| !! | ATTTAGGTCACTAATTTATT+TGG | + | chr1.3:59881650-59881669 | None:intergenic | 20.0% |
| !! | ATTTCAAGGAAAAAATTCAT+AGG | + | chr1.3:59881065-59881084 | None:intergenic | 20.0% |
| !! | CAACATATATGCTATTATTA+AGG | + | chr1.3:59878100-59878119 | None:intergenic | 20.0% |
| !! | TAAAATCAATACTGATATTC+TGG | - | chr1.3:59877836-59877855 | MS.gene21013:intron | 20.0% |
| !! | TAACATTGCAAATTGTTTAT+AGG | - | chr1.3:59881362-59881381 | MS.gene21013:intron | 20.0% |
| !! | TAGAGAAAATACAAAGTTAT+GGG | - | chr1.3:59881086-59881105 | MS.gene21013:CDS | 20.0% |
| !! | TTCAAACAATCTTACAAAAA+AGG | + | chr1.3:59881547-59881566 | None:intergenic | 20.0% |
| !! | TTCATGAGACAATAATAAAT+TGG | + | chr1.3:59879401-59879420 | None:intergenic | 20.0% |
| !! | TTTATTCAAACAATGACTAA+AGG | + | chr1.3:59880994-59881013 | None:intergenic | 20.0% |
| !!! | AAATCAATCATTCTATTTTC+AGG | - | chr1.3:59878907-59878926 | MS.gene21013:intron | 20.0% |
| !!! | AAGATTTTCAGCATTTTAAT+AGG | + | chr1.3:59878371-59878390 | None:intergenic | 20.0% |
| !!! | AGGTAATTTTTTGTTTTGTT+AGG | - | chr1.3:59877613-59877632 | MS.gene21013:CDS | 20.0% |
| !!! | CATTGTTTCTTATCTTTTTA+TGG | - | chr1.3:59877972-59877991 | MS.gene21013:intron | 20.0% |
| !!! | CATTTTTTGAAATACAAACT+TGG | - | chr1.3:59881940-59881959 | MS.gene21013:CDS | 20.0% |
| !!! | TAACATACTTTTATACTTCT+CGG | - | chr1.3:59879294-59879313 | MS.gene21013:intron | 20.0% |
| !!! | TATATGTAATCAGTTGATAT+CGG | - | chr1.3:59878322-59878341 | MS.gene21013:intron | 20.0% |
| !!! | TGTATTTTCTCTATATTTCA+AGG | + | chr1.3:59881079-59881098 | None:intergenic | 20.0% |
| ! | AAATAAAAGTGATCCAAAAG+GGG | - | chr1.3:59881013-59881032 | MS.gene21013:CDS | 25.0% |
| ! | AAATAACAAACTACATGTCA+AGG | + | chr1.3:59879137-59879156 | None:intergenic | 25.0% |
| ! | AAATGCTGAAAATCTTATGT+TGG | - | chr1.3:59878375-59878394 | MS.gene21013:intron | 25.0% |
| ! | AACACATGATATTTGTAAAG+AGG | + | chr1.3:59881511-59881530 | None:intergenic | 25.0% |
| ! | AACGAATACTGATATACAAT+TGG | - | chr1.3:59877740-59877759 | MS.gene21013:CDS | 25.0% |
| ! | AATAACAAACTACATGTCAA+GGG | + | chr1.3:59879136-59879155 | None:intergenic | 25.0% |
| ! | ACACATGATATTTGTAAAGA+GGG | + | chr1.3:59881510-59881529 | None:intergenic | 25.0% |
| ! | ACATTGCAAATTGTTTATAG+GGG | - | chr1.3:59881364-59881383 | MS.gene21013:intron | 25.0% |
| ! | AGTATATGCTTATATCTATC+TGG | - | chr1.3:59879858-59879877 | MS.gene21013:CDS | 25.0% |
| ! | ATATATTTGGATATGGACAA+AGG | - | chr1.3:59881392-59881411 | MS.gene21013:intron | 25.0% |
| ! | CTTAGATACCAAATATCAAA+GGG | + | chr1.3:59880673-59880692 | None:intergenic | 25.0% |
| ! | GGAAAGAATATATTTGGATA+TGG | - | chr1.3:59881385-59881404 | MS.gene21013:intron | 25.0% |
| ! | GTATGTGAAAATTTCCTAAA+TGG | - | chr1.3:59880039-59880058 | MS.gene21013:CDS | 25.0% |
| ! | TAACCTAAAAAACTAATCCT+CGG | + | chr1.3:59880263-59880282 | None:intergenic | 25.0% |
| ! | TACTGATATACAATTGGAAT+TGG | - | chr1.3:59877746-59877765 | MS.gene21013:CDS | 25.0% |
| ! | TATAGGGGAAAGAATATATT+TGG | - | chr1.3:59881379-59881398 | MS.gene21013:intron | 25.0% |
| ! | TATTGTCTCATGAAATATTC+AGG | - | chr1.3:59879407-59879426 | MS.gene21013:CDS | 25.0% |
| ! | TCTTAGATACCAAATATCAA+AGG | + | chr1.3:59880674-59880693 | None:intergenic | 25.0% |
| ! | TGATTGTAAGTCACTAAAAA+AGG | - | chr1.3:59880642-59880661 | MS.gene21013:intron | 25.0% |
| ! | TGTATGAGTGAAAAAAGATT+TGG | - | chr1.3:59881891-59881910 | MS.gene21013:CDS | 25.0% |
| ! | TTACAATCAGAAACAAGAAA+AGG | + | chr1.3:59880631-59880650 | None:intergenic | 25.0% |
| ! | TTACATTCCACAAGTAAATA+GGG | + | chr1.3:59878273-59878292 | None:intergenic | 25.0% |
| ! | TTCAAAGGAAAAATAATTGG+AGG | + | chr1.3:59880849-59880868 | None:intergenic | 25.0% |
| ! | TTCAGGAGACAATAATAAAT+TGG | + | chr1.3:59879321-59879340 | None:intergenic | 25.0% |
| ! | TTTACATTCCACAAGTAAAT+AGG | + | chr1.3:59878274-59878293 | None:intergenic | 25.0% |
| !! | AATACAAACTTGGATTTTGA+TGG | - | chr1.3:59881950-59881969 | MS.gene21013:CDS | 25.0% |
| !! | TAACTTCTATCAAACACTTT+TGG | + | chr1.3:59878512-59878531 | None:intergenic | 25.0% |
| !! | TTGAAAATATTCTCTTTTCC+AGG | - | chr1.3:59880511-59880530 | MS.gene21013:intron | 25.0% |
| !! | TTTAAAACTGTGTCTTTCTT+CGG | - | chr1.3:59878198-59878217 | MS.gene21013:intron | 25.0% |
| !!! | ATTTGTCATCGATTTTTCAA+AGG | + | chr1.3:59880864-59880883 | None:intergenic | 25.0% |
| !!! | ATTTTTCAATTTCAGATAGC+TGG | - | chr1.3:59879478-59879497 | MS.gene21013:intron | 25.0% |
| !!! | TCCTTTTCCTTGTTTTATTT+GGG | - | chr1.3:59880236-59880255 | MS.gene21013:CDS | 25.0% |
| !!! | TGTTTCTACAGATTTTATCA+CGG | - | chr1.3:59882031-59882050 | MS.gene21013:CDS | 25.0% |
| !!! | TTATGGTTTGTTATGTATGT+AGG | - | chr1.3:59877989-59878008 | MS.gene21013:intron | 25.0% |
| !!! | TTCCTTTTCCTTGTTTTATT+TGG | - | chr1.3:59880235-59880254 | MS.gene21013:CDS | 25.0% |
| AAAATACCCCTATTTACTTG+TGG | - | chr1.3:59878263-59878282 | MS.gene21013:intron | 30.0% | |
| AAATACAAAGTTATGGGACA+AGG | - | chr1.3:59881092-59881111 | MS.gene21013:CDS | 30.0% | |
| AAATGGATGAGATTAAAGGT+GGG | + | chr1.3:59877499-59877518 | None:intergenic | 30.0% | |
| AACAATCCATATCACCATTT+AGG | + | chr1.3:59881666-59881685 | None:intergenic | 30.0% | |
| AAGATTGTTTGAACGTATCT+AGG | - | chr1.3:59881554-59881573 | MS.gene21013:intron | 30.0% | |
| AATCAATACTGATATTCTGG+TGG | - | chr1.3:59877839-59877858 | MS.gene21013:intron | 30.0% | |
| AATTTGTGAGTTTCAAAGTC+AGG | + | chr1.3:59879461-59879480 | None:intergenic | 30.0% | |
| ACAGTTAAGTAGTTATATGC+AGG | + | chr1.3:59878826-59878845 | None:intergenic | 30.0% | |
| ACTAAAGTGGCTATAATTGT+TGG | - | chr1.3:59878757-59878776 | MS.gene21013:intron | 30.0% | |
| ACTGAGGATGATAAGAAAAA+AGG | + | chr1.3:59882311-59882330 | None:intergenic | 30.0% | |
| ACTGTCATATGAAATCTTCA+GGG | + | chr1.3:59879841-59879860 | None:intergenic | 30.0% | |
| ACTTCTTTCAAGCTTCAAAT+AGG | - | chr1.3:59881292-59881311 | MS.gene21013:intron | 30.0% | |
| AGAAAGTTCCTGAATATTTC+AGG | + | chr1.3:59879338-59879357 | None:intergenic | 30.0% | |
| ATACTCCTAGATCATATCTA+GGG | - | chr1.3:59880818-59880837 | MS.gene21013:CDS | 30.0% | |
| ATATGCTTATATCTATCTGG+TGG | - | chr1.3:59879861-59879880 | MS.gene21013:CDS | 30.0% | |
| ATCAATCCCTATAGTAACTT+TGG | + | chr1.3:59881211-59881230 | None:intergenic | 30.0% | |
| ATTTGTGAGTTTCAAAGTCA+GGG | + | chr1.3:59879460-59879479 | None:intergenic | 30.0% | |
| CAAACATCAATAAGTGTACA+AGG | + | chr1.3:59878567-59878586 | None:intergenic | 30.0% | |
| GACGATCACTATTTACAAAA+AGG | + | chr1.3:59881444-59881463 | None:intergenic | 30.0% | |
| GTGATAAAATCTGTAGAAAC+AGG | + | chr1.3:59882032-59882051 | None:intergenic | 30.0% | |
| GTGCATTATATATTTGATGG+TGG | - | chr1.3:59881146-59881165 | MS.gene21013:CDS | 30.0% | |
| TAACTACTTAACTGTCATTC+AGG | - | chr1.3:59878831-59878850 | MS.gene21013:intron | 30.0% | |
| TACACTTATTGATGTTTGTG+TGG | - | chr1.3:59878569-59878588 | MS.gene21013:intron | 30.0% | |
| TACATTCCACAAGTAAATAG+GGG | + | chr1.3:59878272-59878291 | None:intergenic | 30.0% | |
| TACTGTCATATGAAATCTTC+AGG | + | chr1.3:59879842-59879861 | None:intergenic | 30.0% | |
| TATTGTCTCCTGAAATATTC+AGG | - | chr1.3:59879327-59879346 | MS.gene21013:intron | 30.0% | |
| TCCCAAATAAAACAAGGAAA+AGG | + | chr1.3:59880240-59880259 | None:intergenic | 30.0% | |
| TGATATTTGTAAAGAGGGTT+TGG | + | chr1.3:59881505-59881524 | None:intergenic | 30.0% | |
| TGATGACCAAAGTTACTATA+GGG | - | chr1.3:59881202-59881221 | MS.gene21013:intron | 30.0% | |
| TTCAATATTGTTCTTACACC+AGG | - | chr1.3:59879984-59880003 | MS.gene21013:intron | 30.0% | |
| ! | ATATCCTGCTTGATTTTACA+AGG | + | chr1.3:59878873-59878892 | None:intergenic | 30.0% |
| ! | ATTTGTTAGCAAACTAGACT+TGG | - | chr1.3:59881753-59881772 | MS.gene21013:CDS | 30.0% |
| ! | CAAGCAATTTGGCATTTTAA+AGG | - | chr1.3:59880410-59880429 | MS.gene21013:intron | 30.0% |
| ! | TGTATTGGGTGAAAATTTTG+CGG | - | chr1.3:59881778-59881797 | MS.gene21013:CDS | 30.0% |
| ! | TTGATGACCAAAGTTACTAT+AGG | - | chr1.3:59881201-59881220 | MS.gene21013:intron | 30.0% |
| ! | TTGCATTGTTGCAAATTTTG+TGG | - | chr1.3:59878651-59878670 | MS.gene21013:intron | 30.0% |
| !! | AAACTAGACTTGGTTTGTAT+TGG | - | chr1.3:59881763-59881782 | MS.gene21013:CDS | 30.0% |
| !! | AACTAGACTTGGTTTGTATT+GGG | - | chr1.3:59881764-59881783 | MS.gene21013:CDS | 30.0% |
| !! | AGATAGTGTGTTTTGAATAC+TGG | - | chr1.3:59881688-59881707 | MS.gene21013:intron | 30.0% |
| !! | AGCTTCATTGTTTTTCTAAC+TGG | - | chr1.3:59881801-59881820 | MS.gene21013:intron | 30.0% |
| !! | TAGCCTACTTTTATACTTCT+CGG | - | chr1.3:59879374-59879393 | MS.gene21013:intron | 30.0% |
| !! | TATATATTTGATGGTGGTGT+TGG | - | chr1.3:59881152-59881171 | MS.gene21013:CDS | 30.0% |
| !! | TGCTAATGGATTGAAATGAT+AGG | - | chr1.3:59880719-59880738 | MS.gene21013:CDS | 30.0% |
| !!! | ACAAGTAAATAGGGGTATTT+TGG | + | chr1.3:59878264-59878283 | None:intergenic | 30.0% |
| !!! | GGTTGTTTTTTCATAGGTTT+AGG | - | chr1.3:59877930-59877949 | MS.gene21013:intron | 30.0% |
| !!! | TTTGCAATTTTAGAGTATCC+AGG | + | chr1.3:59880756-59880775 | None:intergenic | 30.0% |
| AAAGAAGCTTCCCAAAGAAA+GGG | + | chr1.3:59880066-59880085 | None:intergenic | 35.0% | |
| AAAGATTATGCTGCCAATGA+GGG | - | chr1.3:59880112-59880131 | MS.gene21013:intron | 35.0% | |
| AAAGTGGCTATAATTGTTGG+TGG | - | chr1.3:59878760-59878779 | MS.gene21013:intron | 35.0% | |
| AACAGAGAACTTACTGTAAC+AGG | + | chr1.3:59879589-59879608 | None:intergenic | 35.0% | |
| AAGGCACGTAATAAGATGAT+TGG | + | chr1.3:59878541-59878560 | None:intergenic | 35.0% | |
| AATGTTGTCTCTTCTATCAG+TGG | - | chr1.3:59882227-59882246 | MS.gene21013:CDS | 35.0% | |
| AATTACCTGTGAGAGATAGA+AGG | + | chr1.3:59877601-59877620 | None:intergenic | 35.0% | |
| ACATGTCATATGATGTCGTA+GGG | - | chr1.3:59882061-59882080 | MS.gene21013:CDS | 35.0% | |
| AGAAACAAGAAAAGGAGAAG+AGG | + | chr1.3:59880623-59880642 | None:intergenic | 35.0% | |
| AGATAGAAGGGTAGTAATTG+AGG | + | chr1.3:59877588-59877607 | None:intergenic | 35.0% | |
| AGGCTTAACAAGAAGCTTTA+AGG | + | chr1.3:59880931-59880950 | None:intergenic | 35.0% | |
| ATCTGCTTAAAAGTTGCTTC+TGG | - | chr1.3:59879544-59879563 | MS.gene21013:intron | 35.0% | |
| ATGAAATCTTCAGGGTCTAT+GGG | + | chr1.3:59879833-59879852 | None:intergenic | 35.0% | |
| ATTACCTGTGAGAGATAGAA+GGG | + | chr1.3:59877600-59877619 | None:intergenic | 35.0% | |
| CAATAAGTGTACAAGGCAAA+AGG | + | chr1.3:59878560-59878579 | None:intergenic | 35.0% | |
| CAGGATGAAATTTGGAAAGA+AGG | + | chr1.3:59879522-59879541 | None:intergenic | 35.0% | |
| CCTATGAAAAAACAACCTAC+AGG | + | chr1.3:59877927-59877946 | None:intergenic | 35.0% | |
| CTGAAGTAAGTTAATGAACG+AGG | + | chr1.3:59879623-59879642 | None:intergenic | 35.0% | |
| GAAAAAACAACCTACAGGTA+AGG | + | chr1.3:59877922-59877941 | None:intergenic | 35.0% | |
| GAAATGGATGAGATTAAAGG+TGG | + | chr1.3:59877500-59877519 | None:intergenic | 35.0% | |
| GAATATAATTTCGACAGCCT+TGG | - | chr1.3:59880692-59880711 | MS.gene21013:intron | 35.0% | |
| GATACTCCTAGATCATATCT+AGG | - | chr1.3:59880817-59880836 | MS.gene21013:CDS | 35.0% | |
| GCAGATTACAGGATGAAATT+TGG | + | chr1.3:59879530-59879549 | None:intergenic | 35.0% | |
| GCTAAACATCCAAAATGAGA+AGG | + | chr1.3:59882207-59882226 | None:intergenic | 35.0% | |
| GGTGAAATGGATGAGATTAA+AGG | + | chr1.3:59877503-59877522 | None:intergenic | 35.0% | |
| TAAAGATTATGCTGCCAATG+AGG | - | chr1.3:59880111-59880130 | MS.gene21013:intron | 35.0% | |
| TAGTGACCTAAATGGTGATA+TGG | - | chr1.3:59881657-59881676 | MS.gene21013:intron | 35.0% | |
| TAGTTATATGCAGGAACTCT+CGG | + | chr1.3:59878817-59878836 | None:intergenic | 35.0% | |
| TATGAAATCTTCAGGGTCTA+TGG | + | chr1.3:59879834-59879853 | None:intergenic | 35.0% | |
| TCATCCAAAGCAAATCTCAT+CGG | - | chr1.3:59882111-59882130 | MS.gene21013:intron | 35.0% | |
| TCGAATTGATCTGTTATCTG+AGG | - | chr1.3:59879250-59879269 | MS.gene21013:CDS | 35.0% | |
| TGTCAAGACAGTATCTACAA+AGG | + | chr1.3:59877898-59877917 | None:intergenic | 35.0% | |
| TTAACCAACAAGCTTTCTAC+CGG | - | chr1.3:59879707-59879726 | MS.gene21013:intron | 35.0% | |
| TTGAAGCTTGAAAGAAGTTC+TGG | + | chr1.3:59881290-59881309 | None:intergenic | 35.0% | |
| ! | AAATATTCTCTTTTCCAGGC+TGG | - | chr1.3:59880515-59880534 | MS.gene21013:intron | 35.0% |
| ! | AATATTCTCTTTTCCAGGCT+GGG | - | chr1.3:59880516-59880535 | MS.gene21013:intron | 35.0% |
| ! | AGGTTTTGCCCTTTGATATT+TGG | - | chr1.3:59880662-59880681 | MS.gene21013:intron | 35.0% |
| ! | AGTGGAATGTGTGCTTTTAT+GGG | - | chr1.3:59880354-59880373 | MS.gene21013:intron | 35.0% |
| ! | ATGAGATTTGCTTTGGATGA+TGG | + | chr1.3:59882111-59882130 | None:intergenic | 35.0% |
| ! | GCAACTTTTAAGCAGATTAC+AGG | + | chr1.3:59879541-59879560 | None:intergenic | 35.0% |
| ! | TAGTGGAATGTGTGCTTTTA+TGG | - | chr1.3:59880353-59880372 | MS.gene21013:intron | 35.0% |
| ! | TGAGATTTGCTTTGGATGAT+GGG | + | chr1.3:59882110-59882129 | None:intergenic | 35.0% |
| !! | ATCCATTAATTTGCCAACCA+AGG | + | chr1.3:59878788-59878807 | None:intergenic | 35.0% |
| !! | TATGTAGGTTTTGTCTGAAG+AGG | - | chr1.3:59878004-59878023 | MS.gene21013:intron | 35.0% |
| !! | TCAAGCTTTATTTCTCAGCA+TGG | - | chr1.3:59880556-59880575 | MS.gene21013:CDS | 35.0% |
| !! | TCCATTAATTTGCCAACCAA+GGG | + | chr1.3:59878787-59878806 | None:intergenic | 35.0% |
| !!! | CCTGTAGGTTGTTTTTTCAT+AGG | - | chr1.3:59877924-59877943 | MS.gene21013:intron | 35.0% |
| !!! | GTATTGATTTTAATCGGCAC+AGG | + | chr1.3:59877828-59877847 | None:intergenic | 35.0% |
| AAAACCAGTTGTTAAGGGTC+TGG | - | chr1.3:59879884-59879903 | MS.gene21013:CDS | 40.0% | |
| AAAAGTGATCCAAAAGGGGA+GGG | - | chr1.3:59881017-59881036 | MS.gene21013:CDS | 40.0% | |
| AAACTACATGTCAAGGGAAC+AGG | + | chr1.3:59879130-59879149 | None:intergenic | 40.0% | |
| AACAATTGAGGAGGGAAACT+TGG | + | chr1.3:59880299-59880318 | None:intergenic | 40.0% | |
| AACCCATGTTCGAATGTCAA+AGG | + | chr1.3:59881329-59881348 | None:intergenic | 40.0% | |
| AAGAAGGAGGAATGGTGAAA+TGG | + | chr1.3:59877516-59877535 | None:intergenic | 40.0% | |
| AAGATTATGCTGCCAATGAG+GGG | - | chr1.3:59880113-59880132 | MS.gene21013:intron | 40.0% | |
| AATGTAGACACTGAAGTAGG+AGG | + | chr1.3:59878983-59879002 | None:intergenic | 40.0% | |
| ACAAGGAAAGACAAGGTTGT+GGG | - | chr1.3:59881109-59881128 | MS.gene21013:CDS | 40.0% | |
| ACCCATGTTCGAATGTCAAA+GGG | + | chr1.3:59881328-59881347 | None:intergenic | 40.0% | |
| AGAACATGAAAACCCCTCAT+TGG | + | chr1.3:59880128-59880147 | None:intergenic | 40.0% | |
| AGATACAGCTGTGATGCATT+TGG | - | chr1.3:59880891-59880910 | MS.gene21013:intron | 40.0% | |
| AGCAATGTAGACACTGAAGT+AGG | + | chr1.3:59878986-59879005 | None:intergenic | 40.0% | |
| AGTATCCAGGCTTCATTGAT+AGG | - | chr1.3:59881605-59881624 | MS.gene21013:intron | 40.0% | |
| ATACAGCTGTGATGCATTTG+GGG | - | chr1.3:59880893-59880912 | MS.gene21013:intron | 40.0% | |
| ATGCTCCCTAGATATGATCT+AGG | + | chr1.3:59880826-59880845 | None:intergenic | 40.0% | |
| CAACAGGTTTGTGATGGTTT+AGG | + | chr1.3:59879746-59879765 | None:intergenic | 40.0% | |
| CAAGACAGTATCTACAAAGG+CGG | + | chr1.3:59877895-59877914 | None:intergenic | 40.0% | |
| CAAGAGGCTTGAATGAATCA+AGG | + | chr1.3:59878713-59878732 | None:intergenic | 40.0% | |
| CACATGTCATATGATGTCGT+AGG | - | chr1.3:59882060-59882079 | MS.gene21013:CDS | 40.0% | |
| CATCCAAAGCAAATCTCATC+GGG | - | chr1.3:59882112-59882131 | MS.gene21013:intron | 40.0% | |
| CATGTCATATGATGTCGTAG+GGG | - | chr1.3:59882062-59882081 | MS.gene21013:CDS | 40.0% | |
| CCTAAATGGTCCCTTTCTTT+GGG | - | chr1.3:59880053-59880072 | MS.gene21013:CDS | 40.0% | |
| CTTATGTTGGTACAGCTTGT+TGG | - | chr1.3:59878388-59878407 | MS.gene21013:intron | 40.0% | |
| GAAACCAATACGACAAACCA+TGG | + | chr1.3:59879016-59879035 | None:intergenic | 40.0% | |
| GAAAGAAGCTTCCCAAAGAA+AGG | + | chr1.3:59880067-59880086 | None:intergenic | 40.0% | |
| GAATTCCTATCAATGAAGCC+TGG | + | chr1.3:59881613-59881632 | None:intergenic | 40.0% | |
| GATACAGCTGTGATGCATTT+GGG | - | chr1.3:59880892-59880911 | MS.gene21013:intron | 40.0% | |
| GCTGTTGCTGTATATATGAG+TGG | - | chr1.3:59880578-59880597 | MS.gene21013:CDS | 40.0% | |
| GCTTGAATGAATCAAGGCAA+TGG | + | chr1.3:59878707-59878726 | None:intergenic | 40.0% | |
| GGAATTGGATCATGTAAACG+AGG | - | chr1.3:59877761-59877780 | MS.gene21013:intron | 40.0% | |
| GGTGGAAAACCAGTTGTTAA+GGG | - | chr1.3:59879879-59879898 | MS.gene21013:CDS | 40.0% | |
| GTAAGCCTGTAGAACAATTG+AGG | + | chr1.3:59880311-59880330 | None:intergenic | 40.0% | |
| TAAAAGTGATCCAAAAGGGG+AGG | - | chr1.3:59881016-59881035 | MS.gene21013:CDS | 40.0% | |
| TAATTCCTCTCGCCATATGA+TGG | + | chr1.3:59880960-59880979 | None:intergenic | 40.0% | |
| TCAATTGAGCGCTTCATGTA+GGG | + | chr1.3:59878240-59878259 | None:intergenic | 40.0% | |
| TCCACTAAATCCTCCAATGA+TGG | + | chr1.3:59880340-59880359 | None:intergenic | 40.0% | |
| TCCATCATTGGAGGATTTAG+TGG | - | chr1.3:59880336-59880355 | MS.gene21013:intron | 40.0% | |
| TCCCTTGGTTGGCAAATTAA+TGG | - | chr1.3:59878783-59878802 | MS.gene21013:intron | 40.0% | |
| TCCTAAATGGTCCCTTTCTT+TGG | - | chr1.3:59880052-59880071 | MS.gene21013:CDS | 40.0% | |
| TGATAGGTGTAATTGAAGCC+TGG | - | chr1.3:59880735-59880754 | MS.gene21013:CDS | 40.0% | |
| TGGTGGAAAACCAGTTGTTA+AGG | - | chr1.3:59879878-59879897 | MS.gene21013:CDS | 40.0% | |
| TTACATCCATCCATCATTGG+AGG | - | chr1.3:59880327-59880346 | MS.gene21013:intron | 40.0% | |
| TTATGGGACAAGGAAAGACA+AGG | - | chr1.3:59881102-59881121 | MS.gene21013:CDS | 40.0% | |
| TTCAATTGAGCGCTTCATGT+AGG | + | chr1.3:59878241-59878260 | None:intergenic | 40.0% | |
| TTCATCGAATGATCTGCAAC+AGG | + | chr1.3:59879762-59879781 | None:intergenic | 40.0% | |
| TTGGACTTCTTGAATTGGCT+GGG | - | chr1.3:59881171-59881190 | MS.gene21013:intron | 40.0% | |
| TTGTCTCTTCTATCAGTGGT+TGG | - | chr1.3:59882231-59882250 | MS.gene21013:CDS | 40.0% | |
| ! | AATGTGTGCTTTTATGGGTG+TGG | - | chr1.3:59880359-59880378 | MS.gene21013:intron | 40.0% |
| ! | ACAGCATTTTTAACGCAGCA+TGG | - | chr1.3:59880017-59880036 | MS.gene21013:CDS | 40.0% |
| ! | ATATTCTCTTTTCCAGGCTG+GGG | - | chr1.3:59880517-59880536 | MS.gene21013:intron | 40.0% |
| ! | CAAATTTTGTGGAGCAGCTT+TGG | - | chr1.3:59878662-59878681 | MS.gene21013:intron | 40.0% |
| ! | CTAAATCCTCCAATGATGGA+TGG | + | chr1.3:59880336-59880355 | None:intergenic | 40.0% |
| ! | CTACAGATTTTATCACGGCT+AGG | - | chr1.3:59882036-59882055 | MS.gene21013:CDS | 40.0% |
| ! | GCAAACGATCCTTCTCATTT+TGG | - | chr1.3:59882195-59882214 | MS.gene21013:intron | 40.0% |
| ! | GCACACATTTGCTGAAACAT+AGG | + | chr1.3:59878173-59878192 | None:intergenic | 40.0% |
| ! | GGACCGAGAAGTATAAAAGT+AGG | + | chr1.3:59879300-59879319 | None:intergenic | 40.0% |
| ! | GTAATCAGTTGATATCGGCA+TGG | - | chr1.3:59878327-59878346 | MS.gene21013:intron | 40.0% |
| ! | TATTGAGAAGCTTTGTGGTG+TGG | - | chr1.3:59879045-59879064 | MS.gene21013:intron | 40.0% |
| ! | TGAGCCTTGTAAAATCAAGC+AGG | - | chr1.3:59878866-59878885 | MS.gene21013:intron | 40.0% |
| ! | TGGTGTTGGACTTCTTGAAT+TGG | - | chr1.3:59881166-59881185 | MS.gene21013:intron | 40.0% |
| !! | AAGCCTTGTTCTCCATCATA+TGG | - | chr1.3:59880945-59880964 | MS.gene21013:intron | 40.0% |
| !! | AAGTTCTGGCTCTACTGAAT+TGG | + | chr1.3:59881276-59881295 | None:intergenic | 40.0% |
| !! | AGTTGCTTCTGGCTTAATGA+TGG | - | chr1.3:59879555-59879574 | MS.gene21013:intron | 40.0% |
| !! | GTTGCTTCTGGCTTAATGAT+GGG | - | chr1.3:59879556-59879575 | MS.gene21013:intron | 40.0% |
| !! | TAGGAGTATCGTATGAGTGT+CGG | + | chr1.3:59880807-59880826 | None:intergenic | 40.0% |
| !! | TATAATTGTTGGTGGTCCCT+TGG | - | chr1.3:59878768-59878787 | MS.gene21013:intron | 40.0% |
| !! | TTGTCGTATTGGTTTCAGCT+GGG | - | chr1.3:59879020-59879039 | MS.gene21013:intron | 40.0% |
| !! | TTTGTCGTATTGGTTTCAGC+TGG | - | chr1.3:59879019-59879038 | MS.gene21013:intron | 40.0% |
| !!! | AGGCTTTTTTGTTCGTCTGT+TGG | + | chr1.3:59882291-59882310 | None:intergenic | 40.0% |
| !!! | GGACCGAGGATTAGTTTTTT+AGG | - | chr1.3:59880257-59880276 | MS.gene21013:CDS | 40.0% |
| AACATTCGTGTCTTCGACTC+TGG | - | chr1.3:59880386-59880405 | MS.gene21013:intron | 45.0% | |
| AACTTCAGATGTGCCTAGCT+TGG | - | chr1.3:59878464-59878483 | MS.gene21013:intron | 45.0% | |
| AATGCTGTCATCAAACTGCC+TGG | + | chr1.3:59880005-59880024 | None:intergenic | 45.0% | |
| ACAGACAAGATGACCAAGCT+AGG | + | chr1.3:59878480-59878499 | None:intergenic | 45.0% | |
| ACATGTTCTTGCAGCTACTC+CGG | - | chr1.3:59878031-59878050 | MS.gene21013:intron | 45.0% | |
| ACTACCCTTCTATCTCTCAC+AGG | - | chr1.3:59877593-59877612 | MS.gene21013:CDS | 45.0% | |
| AGCCTGTAGAACAATTGAGG+AGG | + | chr1.3:59880308-59880327 | None:intergenic | 45.0% | |
| AGCTGCTGATAGTAACTGAG+TGG | + | chr1.3:59878936-59878955 | None:intergenic | 45.0% | |
| AGGTTTGTGATGGTTTAGGC+CGG | + | chr1.3:59879742-59879761 | None:intergenic | 45.0% | |
| ATCCAAAAGGGGAGGGAATT+TGG | - | chr1.3:59881024-59881043 | MS.gene21013:CDS | 45.0% | |
| ATGCGAGAAAGAAGGAGGAA+TGG | + | chr1.3:59877524-59877543 | None:intergenic | 45.0% | |
| CAATCCATTAGCAACTGCCA+AGG | + | chr1.3:59880712-59880731 | None:intergenic | 45.0% | |
| CAATTGAGCGCTTCATGTAG+GGG | + | chr1.3:59878239-59878258 | None:intergenic | 45.0% | |
| CACAGCTGACAGGAGTTAAT+AGG | - | chr1.3:59879192-59879211 | MS.gene21013:CDS | 45.0% | |
| CAGCATGGATGTTCTGTAGA+TGG | - | chr1.3:59882256-59882275 | MS.gene21013:CDS | 45.0% | |
| CCCAAAGAAAGGGACCATTT+AGG | + | chr1.3:59880056-59880075 | None:intergenic | 45.0% | |
| CCTCGGTCCCAAATAAAACA+AGG | + | chr1.3:59880246-59880265 | None:intergenic | 45.0% | |
| CGATAGCGTAATCTCGAAGA+AGG | + | chr1.3:59877550-59877569 | None:intergenic | 45.0% | |
| CTATTAACTCCTGTCAGCTG+TGG | + | chr1.3:59879194-59879213 | None:intergenic | 45.0% | |
| GACAAGGAAAGACAAGGTTG+TGG | - | chr1.3:59881108-59881127 | MS.gene21013:CDS | 45.0% | |
| GATCTGCAACAGGTTTGTGA+TGG | + | chr1.3:59879752-59879771 | None:intergenic | 45.0% | |
| GCATCAGATGCTGACAGTAT+AGG | - | chr1.3:59879788-59879807 | MS.gene21013:CDS | 45.0% | |
| GCCCTTTGACATTCGAACAT+GGG | - | chr1.3:59881324-59881343 | MS.gene21013:intron | 45.0% | |
| GCCTGTAGAACAATTGAGGA+GGG | + | chr1.3:59880307-59880326 | None:intergenic | 45.0% | |
| GGCTTACATCCATCCATCAT+TGG | - | chr1.3:59880324-59880343 | MS.gene21013:intron | 45.0% | |
| GGGCGCAAATTATCCAAACT+GGG | - | chr1.3:59882082-59882101 | MS.gene21013:CDS | 45.0% | |
| GGTTTATTTCCACAGCTGAC+AGG | - | chr1.3:59879182-59879201 | MS.gene21013:CDS | 45.0% | |
| GTAAACGAGGATACGAGTGA+AGG | - | chr1.3:59877774-59877793 | MS.gene21013:intron | 45.0% | |
| GTCTTGACATCCTTACCTGT+AGG | - | chr1.3:59877909-59877928 | MS.gene21013:intron | 45.0% | |
| GTTGGACTTCTTGAATTGGC+TGG | - | chr1.3:59881170-59881189 | MS.gene21013:intron | 45.0% | |
| TCCCTCCTCAATTGTTCTAC+AGG | - | chr1.3:59880303-59880322 | MS.gene21013:CDS | 45.0% | |
| TCGACTCTGGTCAAGCAATT+TGG | - | chr1.3:59880399-59880418 | MS.gene21013:intron | 45.0% | |
| TGAATCAAGGCAATGGCAGA+AGG | + | chr1.3:59878700-59878719 | None:intergenic | 45.0% | |
| TGCCCTTTGACATTCGAACA+TGG | - | chr1.3:59881323-59881342 | MS.gene21013:intron | 45.0% | |
| TTAATCGGCACAGGACATTC+AGG | + | chr1.3:59877819-59877838 | None:intergenic | 45.0% | |
| TTCAGGGTCTATGGGAAGAT+CGG | + | chr1.3:59879825-59879844 | None:intergenic | 45.0% | |
| ! | AACCAAATTCCCTCCCCTTT+TGG | + | chr1.3:59881029-59881048 | None:intergenic | 45.0% |
| ! | AAGCTTTGTGGTGTGGCTTT+GGG | - | chr1.3:59879052-59879071 | MS.gene21013:intron | 45.0% |
| ! | AGAAGTTGCTGTTGCAAGTC+TGG | - | chr1.3:59882140-59882159 | MS.gene21013:intron | 45.0% |
| ! | AGTCCCGATGAGATTTGCTT+TGG | + | chr1.3:59882118-59882137 | None:intergenic | 45.0% |
| ! | GGTGGGTTTCTTCACTAAAG+TGG | - | chr1.3:59878744-59878763 | MS.gene21013:intron | 45.0% |
| ! | TCGCCATATGATGGAGAACA+AGG | + | chr1.3:59880951-59880970 | None:intergenic | 45.0% |
| !! | ATAGCTGGAGCATTGCTGTT+TGG | - | chr1.3:59879493-59879512 | MS.gene21013:intron | 45.0% |
| !! | GAAGGTTGATGCGAGAAAGA+AGG | + | chr1.3:59877532-59877551 | None:intergenic | 45.0% |
| !! | TGTCGTATTGGTTTCAGCTG+GGG | - | chr1.3:59879021-59879040 | MS.gene21013:intron | 45.0% |
| !!! | AGCAGCTTTGGACTTTTGCT+TGG | - | chr1.3:59878674-59878693 | MS.gene21013:intron | 45.0% |
| !!! | CCTTGTTTTATTTGGGACCG+AGG | - | chr1.3:59880243-59880262 | MS.gene21013:CDS | 45.0% |
| AACGCCGGTAGAAAGCTTGT+TGG | + | chr1.3:59879714-59879733 | None:intergenic | 50.0% | |
| AAGAAACCCACCACAGCAAC+TGG | + | chr1.3:59878736-59878755 | None:intergenic | 50.0% | |
| ACAGCCTTGGCAGTTGCTAA+TGG | - | chr1.3:59880705-59880724 | MS.gene21013:intron | 50.0% | |
| ACCCTGCTGGGTTATATGGT+GGG | - | chr1.3:59878057-59878076 | MS.gene21013:intron | 50.0% | |
| AGACACTGAAGTAGGAGGCA+CGG | + | chr1.3:59878978-59878997 | None:intergenic | 50.0% | |
| ATCCCACCATATAACCCAGC+AGG | + | chr1.3:59878062-59878081 | None:intergenic | 50.0% | |
| CCTTCCTGCTAGTATTGCGT+GGG | - | chr1.3:59879950-59879969 | MS.gene21013:intron | 50.0% | |
| CTACATTGCTTCTGCGTCCA+TGG | - | chr1.3:59878996-59879015 | MS.gene21013:intron | 50.0% | |
| CTGGCAGAGTCTCTAATGCT+TGG | - | chr1.3:59882159-59882178 | MS.gene21013:intron | 50.0% | |
| GCAATACTAGCAGGAAGGAC+TGG | + | chr1.3:59879948-59879967 | None:intergenic | 50.0% | |
| GCTTCCAGACCCTTAACAAC+TGG | + | chr1.3:59879891-59879910 | None:intergenic | 50.0% | |
| GGGGCGCAAATTATCCAAAC+TGG | - | chr1.3:59882081-59882100 | MS.gene21013:CDS | 50.0% | |
| GGGGCTATTGAGAAGCTTTG+TGG | - | chr1.3:59879040-59879059 | MS.gene21013:intron | 50.0% | |
| GGTCTGGAAGCTATCAAGCT+CGG | - | chr1.3:59879900-59879919 | MS.gene21013:CDS | 50.0% | |
| GGTTGCAAATGAGCGTGACT+GGG | - | chr1.3:59879075-59879094 | MS.gene21013:intron | 50.0% | |
| GTGATCGTCACCTACTGATG+TGG | - | chr1.3:59881455-59881474 | MS.gene21013:intron | 50.0% | |
| GTTCTCCATCATATGGCGAG+AGG | - | chr1.3:59880952-59880971 | MS.gene21013:intron | 50.0% | |
| TCCCACCATATAACCCAGCA+GGG | + | chr1.3:59878061-59878080 | None:intergenic | 50.0% | |
| TCCTTCCTGCTAGTATTGCG+TGG | - | chr1.3:59879949-59879968 | MS.gene21013:intron | 50.0% | |
| TTTCTACCGGCGTTCTTGAC+CGG | - | chr1.3:59879720-59879739 | MS.gene21013:intron | 50.0% | |
| TTTGCTTGTGCAAGTGCGAC+TGG | + | chr1.3:59879218-59879237 | None:intergenic | 50.0% | |
| ! | AGCTTTGTGGTGTGGCTTTG+GGG | - | chr1.3:59879053-59879072 | MS.gene21013:intron | 50.0% |
| ! | GAAGCTTTGTGGTGTGGCTT+TGG | - | chr1.3:59879051-59879070 | MS.gene21013:intron | 50.0% |
| ! | GCGTCCATGGTTTGTCGTAT+TGG | - | chr1.3:59879009-59879028 | MS.gene21013:intron | 50.0% |
| ! | GGTTGATGCGAGAAAGAAGG+AGG | + | chr1.3:59877529-59877548 | None:intergenic | 50.0% |
| ! | TATCAGTGGTTGGTGCAGCA+TGG | - | chr1.3:59882241-59882260 | MS.gene21013:CDS | 50.0% |
| !! | ATTGTTGGTGGTCCCTTGGT+TGG | - | chr1.3:59878772-59878791 | MS.gene21013:intron | 50.0% |
| !! | CTCGGCTGGAAAGAGTATCT+TGG | - | chr1.3:59879918-59879937 | MS.gene21013:intron | 50.0% |
| !! | TGGATGATGGGATCCCAGTT+TGG | + | chr1.3:59882098-59882117 | None:intergenic | 50.0% |
| AAGCCTCTTGCCAGTTGCTG+TGG | - | chr1.3:59878723-59878742 | MS.gene21013:intron | 55.0% | |
| AGCACCCACGCAATACTAGC+AGG | + | chr1.3:59879957-59879976 | None:intergenic | 55.0% | |
| AGCGCTTCATGTAGGGGATG+GGG | + | chr1.3:59878233-59878252 | None:intergenic | 55.0% | |
| CACCCTGCTGGGTTATATGG+TGG | - | chr1.3:59878056-59878075 | MS.gene21013:intron | 55.0% | |
| CCCACGCAATACTAGCAGGA+AGG | + | chr1.3:59879953-59879972 | None:intergenic | 55.0% | |
| CGCGCTGCGTATAAGTATCC+AGG | - | chr1.3:59881592-59881611 | MS.gene21013:intron | 55.0% | |
| CTCTTGCCAGTTGCTGTGGT+GGG | - | chr1.3:59878727-59878746 | MS.gene21013:intron | 55.0% | |
| GAGCGCTTCATGTAGGGGAT+GGG | + | chr1.3:59878234-59878253 | None:intergenic | 55.0% | |
| GCACACCCTGCTGGGTTATA+TGG | - | chr1.3:59878053-59878072 | MS.gene21013:intron | 55.0% | |
| GCAGCGCGTATGATGCAATG+TGG | + | chr1.3:59881580-59881599 | None:intergenic | 55.0% | |
| GGGGAGGGAATTTGGTTGTG+TGG | - | chr1.3:59881032-59881051 | MS.gene21013:CDS | 55.0% | |
| GGGTTGCAAATGAGCGTGAC+TGG | - | chr1.3:59879074-59879093 | MS.gene21013:intron | 55.0% | |
| TATAACCCAGCAGGGTGTGC+CGG | + | chr1.3:59878053-59878072 | None:intergenic | 55.0% | |
| TGAGCGCTTCATGTAGGGGA+TGG | + | chr1.3:59878235-59878254 | None:intergenic | 55.0% | |
| TGGAAGCTATCAAGCTCGGC+TGG | - | chr1.3:59879904-59879923 | MS.gene21013:CDS | 55.0% | |
| TTTAGGCCGGTCAAGAACGC+CGG | + | chr1.3:59879729-59879748 | None:intergenic | 55.0% | |
| ! | TTTTCCAGGCTGGGGCAGTT+GGG | - | chr1.3:59880525-59880544 | MS.gene21013:intron | 55.0% |
| !! | GCTTTGTGGTGTGGCTTTGG+GGG | - | chr1.3:59879054-59879073 | MS.gene21013:intron | 55.0% |
| CCACCACAGCAACTGGCAAG+AGG | + | chr1.3:59878729-59878748 | None:intergenic | 60.0% | |
| CCTCTTGCCAGTTGCTGTGG+TGG | - | chr1.3:59878726-59878745 | MS.gene21013:intron | 60.0% | |
| TGAGCGTGACTGGGTTGTGC+TGG | - | chr1.3:59879084-59879103 | MS.gene21013:intron | 60.0% | |
| ! | CTTTTCCAGGCTGGGGCAGT+TGG | - | chr1.3:59880524-59880543 | MS.gene21013:intron | 60.0% |
| CTACTCCGGCACACCCTGCT+GGG | - | chr1.3:59878045-59878064 | MS.gene21013:intron | 65.0% | |
| CCAACCCAACTGCCCCAGCC+TGG | + | chr1.3:59880532-59880551 | None:intergenic | 70.0% | |
| CCAGGCTGGGGCAGTTGGGT+TGG | - | chr1.3:59880529-59880548 | MS.gene21013:intron | 70.0% | |
| GCTACTCCGGCACACCCTGC+TGG | - | chr1.3:59878044-59878063 | MS.gene21013:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 59877481 | 59882335 | 59877481 | ID=MS.gene21013 |
| chr1.3 | mRNA | 59877481 | 59882335 | 59877481 | ID=MS.gene21013.t1;Parent=MS.gene21013 |
| chr1.3 | exon | 59882202 | 59882335 | 59882202 | ID=MS.gene21013.t1.exon1;Parent=MS.gene21013.t1 |
| chr1.3 | CDS | 59882202 | 59882335 | 59882202 | ID=cds.MS.gene21013.t1;Parent=MS.gene21013.t1 |
| chr1.3 | exon | 59881890 | 59882106 | 59881890 | ID=MS.gene21013.t1.exon2;Parent=MS.gene21013.t1 |
| chr1.3 | CDS | 59881890 | 59882106 | 59881890 | ID=cds.MS.gene21013.t1;Parent=MS.gene21013.t1 |
| chr1.3 | exon | 59881742 | 59881805 | 59881742 | ID=MS.gene21013.t1.exon3;Parent=MS.gene21013.t1 |
| chr1.3 | CDS | 59881742 | 59881805 | 59881742 | ID=cds.MS.gene21013.t1;Parent=MS.gene21013.t1 |
| chr1.3 | exon | 59880964 | 59881178 | 59880964 | ID=MS.gene21013.t1.exon4;Parent=MS.gene21013.t1 |
| chr1.3 | CDS | 59880964 | 59881178 | 59880964 | ID=cds.MS.gene21013.t1;Parent=MS.gene21013.t1 |
| chr1.3 | exon | 59880711 | 59880887 | 59880711 | ID=MS.gene21013.t1.exon5;Parent=MS.gene21013.t1 |
| chr1.3 | CDS | 59880711 | 59880887 | 59880711 | ID=cds.MS.gene21013.t1;Parent=MS.gene21013.t1 |
| chr1.3 | exon | 59880545 | 59880619 | 59880545 | ID=MS.gene21013.t1.exon6;Parent=MS.gene21013.t1 |
| chr1.3 | CDS | 59880545 | 59880619 | 59880545 | ID=cds.MS.gene21013.t1;Parent=MS.gene21013.t1 |
| chr1.3 | exon | 59880222 | 59880323 | 59880222 | ID=MS.gene21013.t1.exon7;Parent=MS.gene21013.t1 |
| chr1.3 | CDS | 59880222 | 59880323 | 59880222 | ID=cds.MS.gene21013.t1;Parent=MS.gene21013.t1 |
| chr1.3 | exon | 59880007 | 59880124 | 59880007 | ID=MS.gene21013.t1.exon8;Parent=MS.gene21013.t1 |
| chr1.3 | CDS | 59880007 | 59880124 | 59880007 | ID=cds.MS.gene21013.t1;Parent=MS.gene21013.t1 |
| chr1.3 | exon | 59879778 | 59879924 | 59879778 | ID=MS.gene21013.t1.exon9;Parent=MS.gene21013.t1 |
| chr1.3 | CDS | 59879778 | 59879924 | 59879778 | ID=cds.MS.gene21013.t1;Parent=MS.gene21013.t1 |
| chr1.3 | exon | 59879385 | 59879491 | 59879385 | ID=MS.gene21013.t1.exon10;Parent=MS.gene21013.t1 |
| chr1.3 | CDS | 59879385 | 59879491 | 59879385 | ID=cds.MS.gene21013.t1;Parent=MS.gene21013.t1 |
| chr1.3 | exon | 59879170 | 59879283 | 59879170 | ID=MS.gene21013.t1.exon11;Parent=MS.gene21013.t1 |
| chr1.3 | CDS | 59879170 | 59879283 | 59879170 | ID=cds.MS.gene21013.t1;Parent=MS.gene21013.t1 |
| chr1.3 | exon | 59877481 | 59877774 | 59877481 | ID=MS.gene21013.t1.exon12;Parent=MS.gene21013.t1 |
| chr1.3 | CDS | 59877481 | 59877774 | 59877481 | ID=cds.MS.gene21013.t1;Parent=MS.gene21013.t1 |
| Gene Sequence |
| Protein sequence |
