Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31045.t1 | XP_003602473.2 | 90.9 | 527 | 17 | 3 | 1 | 496 | 10 | 536 | 7.00E-264 | 919.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31045.t1 | Q9LV85 | 35.7 | 476 | 260 | 10 | 42 | 487 | 95 | 554 | 1.8e-71 | 271.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31045.t1 | G7JA92 | 90.9 | 527 | 17 | 3 | 1 | 496 | 10 | 536 | 5.0e-264 | 919.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene31045 | 0.849918 | 2.38E-60 | -1.69E-46 |
| MS.gene049159 | MS.gene31045 | 0.804167 | 2.46E-49 | -1.69E-46 |
| MS.gene04918 | MS.gene31045 | 0.814846 | 1.25E-51 | -1.69E-46 |
| MS.gene049350 | MS.gene31045 | 0.822711 | 2.05E-53 | -1.69E-46 |
| MS.gene049368 | MS.gene31045 | 0.950984 | 5.29E-109 | -1.69E-46 |
| MS.gene049499 | MS.gene31045 | 0.807206 | 5.66E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene31045 | 0.805946 | 1.04E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene31045 | 0.840399 | 8.90E-58 | -1.69E-46 |
| MS.gene050253 | MS.gene31045 | 0.822456 | 2.35E-53 | -1.69E-46 |
| MS.gene050384 | MS.gene31045 | 0.802016 | 6.85E-49 | -1.69E-46 |
| MS.gene050386 | MS.gene31045 | 0.803265 | 3.79E-49 | -1.69E-46 |
| MS.gene050414 | MS.gene31045 | 0.810991 | 8.75E-51 | -1.69E-46 |
| MS.gene050551 | MS.gene31045 | 0.805483 | 1.31E-49 | -1.69E-46 |
| MS.gene050646 | MS.gene31045 | 0.827641 | 1.40E-54 | -1.69E-46 |
| MS.gene050654 | MS.gene31045 | 0.830992 | 2.15E-55 | -1.69E-46 |
| MS.gene050689 | MS.gene31045 | 0.819337 | 1.22E-52 | -1.69E-46 |
| MS.gene050838 | MS.gene31045 | 0.810101 | 1.36E-50 | -1.69E-46 |
| MS.gene050931 | MS.gene31045 | 0.809787 | 1.59E-50 | -1.69E-46 |
| MS.gene050941 | MS.gene31045 | 0.802046 | 6.75E-49 | -1.69E-46 |
| MS.gene051003 | MS.gene31045 | 0.825532 | 4.45E-54 | -1.69E-46 |
| MS.gene051234 | MS.gene31045 | 0.83855 | 2.69E-57 | -1.69E-46 |
| MS.gene051343 | MS.gene31045 | 0.821325 | 4.29E-53 | -1.69E-46 |
| MS.gene051363 | MS.gene31045 | 0.800866 | 1.18E-48 | -1.69E-46 |
| MS.gene051365 | MS.gene31045 | 0.806922 | 6.50E-50 | -1.69E-46 |
| MS.gene051676 | MS.gene31045 | 0.849377 | 3.36E-60 | -1.69E-46 |
| MS.gene051856 | MS.gene31045 | 0.829255 | 5.70E-55 | -1.69E-46 |
| MS.gene05188 | MS.gene31045 | 0.805401 | 1.36E-49 | -1.69E-46 |
| MS.gene051902 | MS.gene31045 | 0.818963 | 1.49E-52 | -1.69E-46 |
| MS.gene051975 | MS.gene31045 | 0.842283 | 2.84E-58 | -1.69E-46 |
| MS.gene052016 | MS.gene31045 | 0.816611 | 5.06E-52 | -1.69E-46 |
| MS.gene052072 | MS.gene31045 | 0.83857 | 2.66E-57 | -1.69E-46 |
| MS.gene052296 | MS.gene31045 | 0.80808 | 3.69E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene31045 | 0.819919 | 9.02E-53 | -1.69E-46 |
| MS.gene052342 | MS.gene31045 | 0.829581 | 4.75E-55 | -1.69E-46 |
| MS.gene052434 | MS.gene31045 | 0.825482 | 4.58E-54 | -1.69E-46 |
| MS.gene052463 | MS.gene31045 | 0.83989 | 1.21E-57 | -1.69E-46 |
| MS.gene052516 | MS.gene31045 | 0.830399 | 3.00E-55 | -1.69E-46 |
| MS.gene052609 | MS.gene31045 | 0.833657 | 4.70E-56 | -1.69E-46 |
| MS.gene053079 | MS.gene31045 | 0.83447 | 2.94E-56 | -1.69E-46 |
| MS.gene053226 | MS.gene31045 | 0.812262 | 4.63E-51 | -1.69E-46 |
| MS.gene053298 | MS.gene31045 | 0.804002 | 2.66E-49 | -1.69E-46 |
| MS.gene05350 | MS.gene31045 | 0.802624 | 5.13E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene31045 | 0.841795 | 3.83E-58 | -1.69E-46 |
| MS.gene053931 | MS.gene31045 | 0.820207 | 7.75E-53 | -1.69E-46 |
| MS.gene054178 | MS.gene31045 | 0.807164 | 5.78E-50 | -1.69E-46 |
| MS.gene05458 | MS.gene31045 | 0.8562 | 3.78E-62 | -1.69E-46 |
| MS.gene05469 | MS.gene31045 | 0.801059 | 1.08E-48 | -1.69E-46 |
| MS.gene054892 | MS.gene31045 | 0.801226 | 9.95E-49 | -1.69E-46 |
| MS.gene054893 | MS.gene31045 | 0.802252 | 6.13E-49 | -1.69E-46 |
| MS.gene05517 | MS.gene31045 | 0.816403 | 5.63E-52 | -1.69E-46 |
| MS.gene055311 | MS.gene31045 | 0.826611 | 2.47E-54 | -1.69E-46 |
| MS.gene055313 | MS.gene31045 | 0.840282 | 9.55E-58 | -1.69E-46 |
| MS.gene055314 | MS.gene31045 | 0.825531 | 4.45E-54 | -1.69E-46 |
| MS.gene055513 | MS.gene31045 | 0.834939 | 2.24E-56 | -1.69E-46 |
| MS.gene055864 | MS.gene31045 | 0.807114 | 5.92E-50 | -1.69E-46 |
| MS.gene055926 | MS.gene31045 | 0.814173 | 1.76E-51 | -1.69E-46 |
| MS.gene056045 | MS.gene31045 | 0.811167 | 8.02E-51 | -1.69E-46 |
| MS.gene056181 | MS.gene31045 | 0.848702 | 5.18E-60 | -1.69E-46 |
| MS.gene056308 | MS.gene31045 | 0.822335 | 2.50E-53 | -1.69E-46 |
| MS.gene056699 | MS.gene31045 | 0.807808 | 4.22E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene31045 | 0.827462 | 1.54E-54 | -1.69E-46 |
| MS.gene056986 | MS.gene31045 | 0.828047 | 1.12E-54 | -1.69E-46 |
| MS.gene057102 | MS.gene31045 | 0.841449 | 4.72E-58 | -1.69E-46 |
| MS.gene057208 | MS.gene31045 | 0.818945 | 1.50E-52 | -1.69E-46 |
| MS.gene057890 | MS.gene31045 | -0.824434 | 8.09E-54 | -1.69E-46 |
| MS.gene057915 | MS.gene31045 | 0.808038 | 3.77E-50 | -1.69E-46 |
| MS.gene058081 | MS.gene31045 | 0.811082 | 8.36E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene31045 | 0.819834 | 9.43E-53 | -1.69E-46 |
| MS.gene058159 | MS.gene31045 | 0.812368 | 4.39E-51 | -1.69E-46 |
| MS.gene058261 | MS.gene31045 | 0.805514 | 1.29E-49 | -1.69E-46 |
| MS.gene058292 | MS.gene31045 | 0.830125 | 3.50E-55 | -1.69E-46 |
| MS.gene058639 | MS.gene31045 | 0.802258 | 6.11E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene31045 | 0.80206 | 6.71E-49 | -1.69E-46 |
| MS.gene05897 | MS.gene31045 | 0.825232 | 5.25E-54 | -1.69E-46 |
| MS.gene059146 | MS.gene31045 | 0.820503 | 6.63E-53 | -1.69E-46 |
| MS.gene059170 | MS.gene31045 | 0.822221 | 2.66E-53 | -1.69E-46 |
| MS.gene05978 | MS.gene31045 | 0.801614 | 8.28E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene31045 | -0.805914 | 1.06E-49 | -1.69E-46 |
| MS.gene059965 | MS.gene31045 | 0.804147 | 2.48E-49 | -1.69E-46 |
| MS.gene06010 | MS.gene31045 | 0.801354 | 9.37E-49 | -1.69E-46 |
| MS.gene060259 | MS.gene31045 | 0.832712 | 8.09E-56 | -1.69E-46 |
| MS.gene060435 | MS.gene31045 | 0.821186 | 4.62E-53 | -1.69E-46 |
| MS.gene060763 | MS.gene31045 | 0.809699 | 1.66E-50 | -1.69E-46 |
| MS.gene060933 | MS.gene31045 | 0.84989 | 2.42E-60 | -1.69E-46 |
| MS.gene060935 | MS.gene31045 | 0.853394 | 2.46E-61 | -1.69E-46 |
| MS.gene060937 | MS.gene31045 | 0.863464 | 2.44E-64 | -1.69E-46 |
| MS.gene061100 | MS.gene31045 | 0.832307 | 1.02E-55 | -1.69E-46 |
| MS.gene061160 | MS.gene31045 | 0.80686 | 6.70E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31045.t1 | MTR_3g094760 | 90.741 | 540 | 19 | 3 | 1 | 509 | 10 | 549 | 0.0 | 997 |
| MS.gene31045.t1 | MTR_3g094760 | 90.000 | 390 | 13 | 2 | 146 | 509 | 1 | 390 | 0.0 | 716 |
| MS.gene31045.t1 | MTR_3g094760 | 88.889 | 378 | 32 | 3 | 1 | 368 | 10 | 387 | 0.0 | 678 |
| MS.gene31045.t1 | MTR_3g094760 | 89.812 | 373 | 29 | 3 | 1 | 365 | 10 | 381 | 0.0 | 672 |
| MS.gene31045.t1 | MTR_7g109250 | 43.836 | 73 | 41 | 0 | 433 | 505 | 1 | 73 | 7.75e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31045.t1 | AT5G64930 | 35.685 | 482 | 262 | 11 | 37 | 487 | 90 | 554 | 3.31e-95 | 300 |
Find 108 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCAAACCTGCCTTGTTCT+TGG | 0.209206 | 3.3:-78665643 | None:intergenic |
| AATATTATACTTGCCTCTTC+TGG | 0.214955 | 3.3:-78667683 | None:intergenic |
| CCTATCCCGCCACAGGTATT+TGG | 0.216056 | 3.3:+78666957 | MS.gene31045:intron |
| GTTACATTTGGCTCTTATAT+TGG | 0.225323 | 3.3:+78668536 | MS.gene31045:CDS |
| TGTTTCGCTCCACACTCTTC+TGG | 0.228023 | 3.3:+78667302 | MS.gene31045:CDS |
| GGTAATAATGTTGCAGCTAT+TGG | 0.237794 | 3.3:+78665777 | MS.gene31045:CDS |
| TTACAAAGAACTAAACTTAA+AGG | 0.241495 | 3.3:+78665699 | MS.gene31045:CDS |
| AGTATTTGAGAAGTCTATTA+TGG | 0.262387 | 3.3:+78667343 | MS.gene31045:CDS |
| TTACATTTGGCTCTTATATT+GGG | 0.305383 | 3.3:+78668537 | MS.gene31045:CDS |
| CAAATACCTTCGACATAAAA+TGG | 0.313208 | 3.3:-78668771 | None:intergenic |
| TTCCAAGAACAAGGCAGGTT+TGG | 0.322158 | 3.3:+78665641 | MS.gene31045:CDS |
| ATAATAGACTTCTCAAATAC+TGG | 0.338799 | 3.3:-78667341 | None:intergenic |
| TTGCGATGAATTATACGAAT+TGG | 0.350702 | 3.3:-78665676 | None:intergenic |
| AATTGATTGATCTACGATTT+CGG | 0.356243 | 3.3:-78667195 | None:intergenic |
| ATCAATATGATGAAAGTAAC+TGG | 0.359996 | 3.3:-78668454 | None:intergenic |
| GTAATAATGTTGCAGCTATT+GGG | 0.361162 | 3.3:+78665778 | MS.gene31045:CDS |
| TGCTTTACAATTCTAATCCT+TGG | 0.374032 | 3.3:-78668831 | None:intergenic |
| CAATTAGTCGTGAAGAGGTT+GGG | 0.380024 | 3.3:+78667213 | MS.gene31045:CDS |
| ATATTGGGAGATTCTGTGTT+TGG | 0.382470 | 3.3:+78668552 | MS.gene31045:CDS |
| TGATATATCCACAGCTAACT+TGG | 0.384633 | 3.3:-78667480 | None:intergenic |
| TTTGTCTGCAGTGTTGTGAT+TGG | 0.387158 | 3.3:-78668628 | None:intergenic |
| GCAGCTATTGGGTTTCCTCT+TGG | 0.395073 | 3.3:+78665789 | MS.gene31045:CDS |
| TGCATTTCTTATCTATATGC+TGG | 0.395276 | 3.3:+78668575 | MS.gene31045:CDS |
| TGCATAGACTGTCTTATTGC+TGG | 0.399086 | 3.3:+78667575 | MS.gene31045:CDS |
| CCTCTGATAAATTTAGAACT+TGG | 0.401901 | 3.3:-78667110 | None:intergenic |
| AATGTCGGTCGCCGCTGTTA+TGG | 0.409104 | 3.3:+78665812 | MS.gene31045:CDS |
| CGAATCCAATACTGGACAAT+TGG | 0.410360 | 3.3:-78668661 | None:intergenic |
| TACAAAGAACTAAACTTAAA+GGG | 0.421502 | 3.3:+78665700 | MS.gene31045:CDS |
| GGGATCCAATTGTCCAGTAT+TGG | 0.427897 | 3.3:+78668656 | MS.gene31045:CDS |
| GTGGAGCGAAACAAACCATT+TGG | 0.429826 | 3.3:-78667292 | None:intergenic |
| TGGGAGGAAGTGGTTACATT+TGG | 0.433556 | 3.3:+78668524 | MS.gene31045:CDS |
| GAAATTGAAAGAGACAGAAT+TGG | 0.434985 | 3.3:+78667424 | MS.gene31045:CDS |
| TTACACTGGATAGAGATTCT+TGG | 0.435874 | 3.3:-78666805 | None:intergenic |
| CTCACGTGATATTGCTATAG+AGG | 0.452113 | 3.3:+78667139 | MS.gene31045:CDS |
| ACAACACTGCAGACAAAGAA+AGG | 0.453746 | 3.3:+78668634 | MS.gene31045:CDS |
| GAAACCGGCGAATCCAATAC+TGG | 0.453805 | 3.3:-78668669 | None:intergenic |
| GAATCATCGGCTAGCAATGA+AGG | 0.454875 | 3.3:+78667056 | MS.gene31045:CDS |
| TGGGTTTCCTCTTGGAATGT+CGG | 0.457541 | 3.3:+78665797 | MS.gene31045:CDS |
| GTATTTGGAGACAAGCTAGA+TGG | 0.458976 | 3.3:+78666972 | MS.gene31045:CDS |
| ATTACCGACGAAAGATGATC+TGG | 0.459956 | 3.3:-78666391 | None:intergenic |
| GAACGGATTAATGAAGCTGC+TGG | 0.464255 | 3.3:+78667650 | MS.gene31045:CDS |
| TCGATTAATTTATGAATCAT+CGG | 0.470997 | 3.3:+78667043 | MS.gene31045:CDS |
| CAGTTAGAAGATACAAGATA+TGG | 0.471609 | 3.3:+78667536 | MS.gene31045:CDS |
| ATCATATTGATGCTAGGAAT+CGG | 0.475169 | 3.3:+78668466 | MS.gene31045:CDS |
| GTTGTGAGCCGAATGGTGTT+TGG | 0.477690 | 3.3:+78668361 | MS.gene31045:CDS |
| CATTGACCTAAGCTAGCAAA+AGG | 0.483365 | 3.3:-78668742 | None:intergenic |
| TAAATTGAATAATATGAGGT+TGG | 0.483853 | 3.3:+78667082 | MS.gene31045:CDS |
| GGTCGCCGCTGTTATGGCTC+AGG | 0.485733 | 3.3:+78665818 | MS.gene31045:CDS |
| GAGTCTCTGTTCGTCGCACA+AGG | 0.486445 | 3.3:+78665754 | MS.gene31045:CDS |
| GCTTTGTACGCAATCCTTCA+CGG | 0.486882 | 3.3:+78668604 | MS.gene31045:CDS |
| GCGTGGGCAATCAAACCAAA+TGG | 0.492192 | 3.3:+78667277 | MS.gene31045:CDS |
| TTAAGAAACCAAACACCATT+CGG | 0.492840 | 3.3:-78668369 | None:intergenic |
| GACCTCAAGACTGTTGAACT+TGG | 0.503042 | 3.3:+78667383 | MS.gene31045:CDS |
| CAACACTGCAGACAAAGAAA+GGG | 0.508358 | 3.3:+78668635 | MS.gene31045:CDS |
| CAAGTGTCGATCTCAGCCAT+TGG | 0.510710 | 3.3:-78665618 | None:intergenic |
| CTTATGTTTATAACTTTGAA+CGG | 0.519189 | 3.3:+78667633 | MS.gene31045:CDS |
| ACTTTCATCATATTGATGCT+AGG | 0.523684 | 3.3:+78668460 | MS.gene31045:CDS |
| GGAATAAATTGAATAATATG+AGG | 0.525115 | 3.3:+78667078 | MS.gene31045:CDS |
| GTGCGACGAACAGAGACTCT+AGG | 0.528010 | 3.3:-78665750 | None:intergenic |
| AAATAGCATAGAAAAGAAAC+CGG | 0.529156 | 3.3:-78668684 | None:intergenic |
| GGAATCGGCTGTGGCTATTG+TGG | 0.531204 | 3.3:+78668481 | MS.gene31045:CDS |
| ACTCGTGATATTGCTTTGCG+TGG | 0.534604 | 3.3:+78667260 | MS.gene31045:CDS |
| TTGCGTATCTGCTCTTCCAA+CGG | 0.536508 | 3.3:+78668404 | MS.gene31045:CDS |
| TTGTCCAGTATTGGATTCGC+CGG | 0.540204 | 3.3:+78668665 | MS.gene31045:CDS |
| TCAATTAGTCGTGAAGAGGT+TGG | 0.540617 | 3.3:+78667212 | MS.gene31045:CDS |
| ACTTGTTCCAAGAACAAGGC+AGG | 0.547264 | 3.3:+78665636 | MS.gene31045:CDS |
| AATTAGTCGTGAAGAGGTTG+GGG | 0.548529 | 3.3:+78667214 | MS.gene31045:CDS |
| CCAAGTTCTAAATTTATCAG+AGG | 0.549470 | 3.3:+78667110 | MS.gene31045:CDS |
| ATAGACACACTGGGAGGAAG+TGG | 0.551696 | 3.3:+78668514 | MS.gene31045:CDS |
| AAGAACTAAACTTAAAGGGA+AGG | 0.560116 | 3.3:+78665704 | MS.gene31045:CDS |
| TGTGCGTGTGATAGTAGCCC+TGG | 0.564868 | 3.3:-78667170 | None:intergenic |
| CGACACTTGTTCCAAGAACA+AGG | 0.568523 | 3.3:+78665632 | MS.gene31045:CDS |
| CCGTCGACATAACTGATCCT+TGG | 0.569295 | 3.3:-78668798 | None:intergenic |
| GCTATAGAGGATGATCAACC+AGG | 0.569754 | 3.3:+78667152 | MS.gene31045:CDS |
| TGCGACGAACAGAGACTCTA+GGG | 0.572180 | 3.3:-78665749 | None:intergenic |
| CTCGTGATATTGCTTTGCGT+GGG | 0.580028 | 3.3:+78667261 | MS.gene31045:CDS |
| AACCATGTGTATAGACACAC+TGG | 0.581583 | 3.3:+78668504 | MS.gene31045:CDS |
| GTGGTTCTACCATTGTGTTG+TGG | 0.589142 | 3.3:+78668712 | MS.gene31045:CDS |
| TCCCAGTGTGTCTATACACA+TGG | 0.593565 | 3.3:-78668506 | None:intergenic |
| TCAATCAATTAGTCGTGAAG+AGG | 0.596638 | 3.3:+78667208 | MS.gene31045:CDS |
| ATGACAATGTTGCTGACCGT+TGG | 0.600468 | 3.3:-78668420 | None:intergenic |
| GACCAAGTTCAACAGTCTTG+AGG | 0.602623 | 3.3:-78667385 | None:intergenic |
| GTCTCTGTTCGTCGCACAAG+GGG | 0.614024 | 3.3:+78665756 | MS.gene31045:CDS |
| GTCTCCAGATCATCTTTCGT+CGG | 0.614069 | 3.3:+78666387 | MS.gene31045:CDS |
| AGAACTAAACTTAAAGGGAA+GGG | 0.614995 | 3.3:+78665705 | MS.gene31045:CDS |
| AATCATCGGCTAGCAATGAA+GGG | 0.615080 | 3.3:+78667057 | MS.gene31045:CDS |
| TTGATGCTAGGAATCGGCTG+TGG | 0.621482 | 3.3:+78668472 | MS.gene31045:CDS |
| TGGATCATGTACTCCAGAAG+AGG | 0.626196 | 3.3:+78667670 | MS.gene31045:CDS |
| GTGTTGTGATTGGTCCGTGA+AGG | 0.630791 | 3.3:-78668618 | None:intergenic |
| CAGTCTTGAGGTCATTAGAA+CGG | 0.632207 | 3.3:-78667373 | None:intergenic |
| GCTAAAGCTCCAGAAGAGTG+TGG | 0.634639 | 3.3:-78667311 | None:intergenic |
| CACGAGTAACTGACTCCATG+TGG | 0.635878 | 3.3:-78667244 | None:intergenic |
| GCAGAGATCCAAGTTAGCTG+TGG | 0.637768 | 3.3:+78667472 | MS.gene31045:CDS |
| AGTCTCTGTTCGTCGCACAA+GGG | 0.643071 | 3.3:+78665755 | MS.gene31045:CDS |
| TCGACGGTGTTTGATGACCA+AGG | 0.644991 | 3.3:+78668814 | MS.gene31045:CDS |
| AACACTGCAGACAAAGAAAG+GGG | 0.647953 | 3.3:+78668636 | MS.gene31045:CDS |
| CCAAGGATCAGTTATGTCGA+CGG | 0.660123 | 3.3:+78668798 | MS.gene31045:CDS |
| AGTTCGAGTTGTGAGCCGAA+TGG | 0.664589 | 3.3:+78668354 | MS.gene31045:intron |
| TCGAAGGTATTTGATGACCA+AGG | 0.667029 | 3.3:+78668781 | MS.gene31045:CDS |
| CTATAGAGGATGATCAACCA+GGG | 0.671615 | 3.3:+78667153 | MS.gene31045:CDS |
| GTGAAGGATTGCGTACAAAG+CGG | 0.678570 | 3.3:-78668602 | None:intergenic |
| GGTTGGGGATAACTTCCACA+TGG | 0.679592 | 3.3:+78667229 | MS.gene31045:CDS |
| GGCAGAAGACCACAACACAA+TGG | 0.680312 | 3.3:-78668721 | None:intergenic |
| ACCATGTGTATAGACACACT+GGG | 0.709070 | 3.3:+78668505 | MS.gene31045:CDS |
| GCGGCGACCGACATTCCAAG+AGG | 0.714229 | 3.3:-78665804 | None:intergenic |
| ACAAGCTAGATGGTTTGACA+AGG | 0.723594 | 3.3:+78666982 | MS.gene31045:CDS |
| ATGTGTATAGACACACTGGG+AGG | 0.773147 | 3.3:+78668508 | MS.gene31045:CDS |
| GTTTACCTGAGCCATAACAG+CGG | 0.843584 | 3.3:-78665823 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAATGGTTATAATAT+AGG | - | chr3.3:78667964-78667983 | None:intergenic | 10.0% |
| !!! | TACTAAGTTTTTTTTTTAAT+TGG | + | chr3.3:78666278-78666297 | MS.gene31045:intron | 10.0% |
| !!! | TTTAAAAATTAAAGCTTTAA+CGG | - | chr3.3:78665853-78665872 | None:intergenic | 10.0% |
| !! | AAAAAATGAAAAACTAAACA+AGG | - | chr3.3:78668102-78668121 | None:intergenic | 15.0% |
| !! | AAAACCGTTATAAAAAAATT+TGG | + | chr3.3:78666719-78666738 | MS.gene31045:intron | 15.0% |
| !! | AAACCGTTATAAAAAAATTT+GGG | + | chr3.3:78666720-78666739 | MS.gene31045:intron | 15.0% |
| !! | GAAATAATATTTCAATGATA+TGG | - | chr3.3:78667851-78667870 | None:intergenic | 15.0% |
| !!! | AAACCCAAATTTTTTTATAA+CGG | - | chr3.3:78666726-78666745 | None:intergenic | 15.0% |
| !!! | GCTAATTATTCTTTAAAAAA+TGG | - | chr3.3:78667976-78667995 | None:intergenic | 15.0% |
| !! | AAGATGAAAATAACTAATAG+GGG | + | chr3.3:78667766-78667785 | MS.gene31045:intron | 20.0% |
| !! | ATTTCGTTAAAACTAAAACT+TGG | - | chr3.3:78666443-78666462 | None:intergenic | 20.0% |
| !! | CAAGATGAAAATAACTAATA+GGG | + | chr3.3:78667765-78667784 | MS.gene31045:intron | 20.0% |
| !! | CTTATGTTTATAACTTTGAA+CGG | + | chr3.3:78667633-78667652 | MS.gene31045:CDS | 20.0% |
| !! | GGAATAAATTGAATAATATG+AGG | + | chr3.3:78667078-78667097 | MS.gene31045:CDS | 20.0% |
| !! | TAAATTGAATAATATGAGGT+TGG | + | chr3.3:78667082-78667101 | MS.gene31045:CDS | 20.0% |
| !! | TACAAAGAACTAAACTTAAA+GGG | + | chr3.3:78665700-78665719 | MS.gene31045:CDS | 20.0% |
| !! | TCGATTAATTTATGAATCAT+CGG | + | chr3.3:78667043-78667062 | MS.gene31045:CDS | 20.0% |
| !! | TGGGTTAAAACTTAAAAATA+AGG | - | chr3.3:78666423-78666442 | None:intergenic | 20.0% |
| !! | TGTTAAAACAATGATGTTTA+GGG | + | chr3.3:78666657-78666676 | MS.gene31045:intron | 20.0% |
| !! | TTACAAAGAACTAAACTTAA+AGG | + | chr3.3:78665699-78665718 | MS.gene31045:CDS | 20.0% |
| !! | TTGTTAAAACAATGATGTTT+AGG | + | chr3.3:78666656-78666675 | MS.gene31045:intron | 20.0% |
| !! | TTTCGTTAAAACTAAAACTT+GGG | - | chr3.3:78666442-78666461 | None:intergenic | 20.0% |
| !! | TTTCTGATTATTACTGTATT+GGG | + | chr3.3:78665882-78665901 | MS.gene31045:intron | 20.0% |
| !!! | AAGCTTTTGTTTTTGTTTTT+AGG | + | chr3.3:78666330-78666349 | MS.gene31045:intron | 20.0% |
| !!! | ACAATTTATTTTGAGAAAGT+GGG | - | chr3.3:78668056-78668075 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTTTAATTGGTAC+AGG | + | chr3.3:78666284-78666303 | MS.gene31045:intron | 20.0% |
| !!! | TACAATTTATTTTGAGAAAG+TGG | - | chr3.3:78668057-78668076 | None:intergenic | 20.0% |
| !!! | TCTAAAGTCAAACATATTAT+TGG | + | chr3.3:78666598-78666617 | MS.gene31045:intron | 20.0% |
| ! | AAATAGCATAGAAAAGAAAC+CGG | - | chr3.3:78668687-78668706 | None:intergenic | 25.0% |
| ! | AACGATGTAAAATGTTTACA+TGG | - | chr3.3:78666522-78666541 | None:intergenic | 25.0% |
| ! | AATTGATTGATCTACGATTT+CGG | - | chr3.3:78667198-78667217 | None:intergenic | 25.0% |
| ! | AGGTGCATATTATGTAAAAT+AGG | + | chr3.3:78668185-78668204 | MS.gene31045:intron | 25.0% |
| ! | AGTATTTGAGAAGTCTATTA+TGG | + | chr3.3:78667343-78667362 | MS.gene31045:CDS | 25.0% |
| ! | ATAATAGACTTCTCAAATAC+TGG | - | chr3.3:78667344-78667363 | None:intergenic | 25.0% |
| ! | ATATTTGAAAGATCACTGAT+AGG | + | chr3.3:78667823-78667842 | MS.gene31045:intron | 25.0% |
| ! | ATCAATATGATGAAAGTAAC+TGG | - | chr3.3:78668457-78668476 | None:intergenic | 25.0% |
| ! | ATGAATTAACAATTGATGTC+TGG | - | chr3.3:78666832-78666851 | None:intergenic | 25.0% |
| ! | ATGTAGTAAAATCACAATCA+AGG | - | chr3.3:78666856-78666875 | None:intergenic | 25.0% |
| ! | CATAGAATAAAATTGGAACA+GGG | - | chr3.3:78667717-78667736 | None:intergenic | 25.0% |
| ! | CTTTCTGATTATTACTGTAT+TGG | + | chr3.3:78665881-78665900 | MS.gene31045:intron | 25.0% |
| ! | GCAAGATGAAAATAACTAAT+AGG | + | chr3.3:78667764-78667783 | MS.gene31045:intron | 25.0% |
| ! | GCAATCTAATTTAAGAACTA+AGG | + | chr3.3:78668165-78668184 | MS.gene31045:intron | 25.0% |
| ! | TATTTGAAAGATCACTGATA+GGG | + | chr3.3:78667824-78667843 | MS.gene31045:intron | 25.0% |
| ! | TGCATATTATGTAAAATAGG+AGG | + | chr3.3:78668188-78668207 | MS.gene31045:intron | 25.0% |
| ! | TGTAGTAAAATCACAATCAA+GGG | - | chr3.3:78666855-78666874 | None:intergenic | 25.0% |
| !! | ATTTTTGTAACACATCACAT+CGG | - | chr3.3:78665968-78665987 | None:intergenic | 25.0% |
| !! | CAAGTTAGAATCAATTTTAG+AGG | + | chr3.3:78666138-78666157 | MS.gene31045:intron | 25.0% |
| !! | CATTAAAGCAGCAATTTTTA+AGG | - | chr3.3:78665920-78665939 | None:intergenic | 25.0% |
| !! | TGAAACTACAATCATAGTTT+TGG | - | chr3.3:78666113-78666132 | None:intergenic | 25.0% |
| !! | TTTTGAATCATCTAACGATT+TGG | - | chr3.3:78666553-78666572 | None:intergenic | 25.0% |
| !!! | AACGGTGTTTTTTCTATTTT+AGG | + | chr3.3:78668261-78668280 | MS.gene31045:intron | 25.0% |
| !!! | ATCTATTGTTTTAGTGTGTT+TGG | - | chr3.3:78666256-78666275 | None:intergenic | 25.0% |
| !!! | GACAATATGATGGATTTTAT+TGG | - | chr3.3:78667933-78667952 | None:intergenic | 25.0% |
| !!! | GTATTTATTGATTCTGTTCA+TGG | + | chr3.3:78666306-78666325 | MS.gene31045:intron | 25.0% |
| !!! | TTACATTTGGCTCTTATATT+GGG | + | chr3.3:78668537-78668556 | MS.gene31045:CDS | 25.0% |
| AAGAACTAAACTTAAAGGGA+AGG | + | chr3.3:78665704-78665723 | MS.gene31045:CDS | 30.0% | |
| AATATTATACTTGCCTCTTC+TGG | - | chr3.3:78667686-78667705 | None:intergenic | 30.0% | |
| AATATTCCCAAATTGAGCAA+AGG | - | chr3.3:78668241-78668260 | None:intergenic | 30.0% | |
| ACTTTCATCATATTGATGCT+AGG | + | chr3.3:78668460-78668479 | MS.gene31045:CDS | 30.0% | |
| AGAACTAAACTTAAAGGGAA+GGG | + | chr3.3:78665705-78665724 | MS.gene31045:CDS | 30.0% | |
| ATAAGCACCATAAAAAAGTG+AGG | - | chr3.3:78667618-78667637 | None:intergenic | 30.0% | |
| ATCATATTGATGCTAGGAAT+CGG | + | chr3.3:78668466-78668485 | MS.gene31045:CDS | 30.0% | |
| ATTTGAAAGATCACTGATAG+GGG | + | chr3.3:78667825-78667844 | MS.gene31045:intron | 30.0% | |
| CAAATACCTTCGACATAAAA+TGG | - | chr3.3:78668774-78668793 | None:intergenic | 30.0% | |
| CAGTTAGAAGATACAAGATA+TGG | + | chr3.3:78667536-78667555 | MS.gene31045:CDS | 30.0% | |
| CCTGAAGCATAGAATAAAAT+TGG | - | chr3.3:78667724-78667743 | None:intergenic | 30.0% | |
| GAAATTGAAAGAGACAGAAT+TGG | + | chr3.3:78667424-78667443 | MS.gene31045:CDS | 30.0% | |
| GCATAGAATAAAATTGGAAC+AGG | - | chr3.3:78667718-78667737 | None:intergenic | 30.0% | |
| GCTCAATTTGGGAATATTAA+CGG | + | chr3.3:78668243-78668262 | MS.gene31045:intron | 30.0% | |
| GTAATAATGTTGCAGCTATT+GGG | + | chr3.3:78665778-78665797 | MS.gene31045:CDS | 30.0% | |
| TACTTCCAGACACATAAAAT+TGG | - | chr3.3:78666211-78666230 | None:intergenic | 30.0% | |
| TGCATTTCTTATCTATATGC+TGG | + | chr3.3:78668575-78668594 | MS.gene31045:CDS | 30.0% | |
| TTAAGAAACCAAACACCATT+CGG | - | chr3.3:78668372-78668391 | None:intergenic | 30.0% | |
| TTGCGATGAATTATACGAAT+TGG | - | chr3.3:78665679-78665698 | None:intergenic | 30.0% | |
| ! | ATTCAACTAGCTCTTAACTA+AGG | - | chr3.3:78666009-78666028 | None:intergenic | 30.0% |
| ! | CAAAACCAATTTTATGTGTC+TGG | + | chr3.3:78666203-78666222 | MS.gene31045:intron | 30.0% |
| ! | CCAATTTTATTCTATGCTTC+AGG | + | chr3.3:78667721-78667740 | MS.gene31045:intron | 30.0% |
| ! | CCTCTGATAAATTTAGAACT+TGG | - | chr3.3:78667113-78667132 | None:intergenic | 30.0% |
| ! | GTCAAACATATTATTGGTTG+TGG | + | chr3.3:78666604-78666623 | MS.gene31045:intron | 30.0% |
| !! | CCAAGTTCTAAATTTATCAG+AGG | + | chr3.3:78667110-78667129 | MS.gene31045:CDS | 30.0% |
| !! | GTTACATTTGGCTCTTATAT+TGG | + | chr3.3:78668536-78668555 | MS.gene31045:CDS | 30.0% |
| !!! | ATGTCATCCTCACTTTTTTA+TGG | + | chr3.3:78667608-78667627 | MS.gene31045:CDS | 30.0% |
| !!! | TTGTTTTAGTGTGTTTGGTT+TGG | - | chr3.3:78666251-78666270 | None:intergenic | 30.0% |
| !!! | TTTCTATGCTATTTTGCTTG+TGG | + | chr3.3:78668693-78668712 | MS.gene31045:CDS | 30.0% |
| AAATGTTTACATGGACAGTG+TGG | - | chr3.3:78666513-78666532 | None:intergenic | 35.0% | |
| AGCATTTCCTTTGCTCAATT+TGG | + | chr3.3:78668231-78668250 | MS.gene31045:intron | 35.0% | |
| ATATTGGGAGATTCTGTGTT+TGG | + | chr3.3:78668552-78668571 | MS.gene31045:CDS | 35.0% | |
| ATGCACACTTGAATTTAACC+AGG | - | chr3.3:78668320-78668339 | None:intergenic | 35.0% | |
| GCATTTCCTTTGCTCAATTT+GGG | + | chr3.3:78668232-78668251 | MS.gene31045:intron | 35.0% | |
| GGCTTTACATGACAATATGA+TGG | - | chr3.3:78667943-78667962 | None:intergenic | 35.0% | |
| GGTAATAATGTTGCAGCTAT+TGG | + | chr3.3:78665777-78665796 | MS.gene31045:CDS | 35.0% | |
| TCAATCAATTAGTCGTGAAG+AGG | + | chr3.3:78667208-78667227 | MS.gene31045:CDS | 35.0% | |
| TGATATATCCACAGCTAACT+TGG | - | chr3.3:78667483-78667502 | None:intergenic | 35.0% | |
| TTACACTGGATAGAGATTCT+TGG | - | chr3.3:78666808-78666827 | None:intergenic | 35.0% | |
| ! | GAAAGACCATTTTATGTCGA+AGG | + | chr3.3:78668765-78668784 | MS.gene31045:CDS | 35.0% |
| !! | TATTTTAGGAACCTTCCTAC+TGG | + | chr3.3:78668275-78668294 | MS.gene31045:intron | 35.0% |
| !! | TTATGTGTCTGGAAGTACTT+TGG | + | chr3.3:78666214-78666233 | MS.gene31045:intron | 35.0% |
| AAATCAAAACAAGCGTCACG+CGG | - | chr3.3:78666934-78666953 | None:intergenic | 40.0% | |
| AACACTGCAGACAAAGAAAG+GGG | + | chr3.3:78668636-78668655 | MS.gene31045:CDS | 40.0% | |
| AACCATGTGTATAGACACAC+TGG | + | chr3.3:78668504-78668523 | MS.gene31045:CDS | 40.0% | |
| AATTAGTCGTGAAGAGGTTG+GGG | + | chr3.3:78667214-78667233 | MS.gene31045:CDS | 40.0% | |
| ACAACACTGCAGACAAAGAA+AGG | + | chr3.3:78668634-78668653 | MS.gene31045:CDS | 40.0% | |
| ACAAGCTAGATGGTTTGACA+AGG | + | chr3.3:78666982-78667001 | MS.gene31045:CDS | 40.0% | |
| ACATCGACAAGAAATCTGTC+AGG | - | chr3.3:78666882-78666901 | None:intergenic | 40.0% | |
| ACCATGTGTATAGACACACT+GGG | + | chr3.3:78668505-78668524 | MS.gene31045:CDS | 40.0% | |
| ATTACCGACGAAAGATGATC+TGG | - | chr3.3:78666394-78666413 | None:intergenic | 40.0% | |
| CAACACTGCAGACAAAGAAA+GGG | + | chr3.3:78668635-78668654 | MS.gene31045:CDS | 40.0% | |
| CAATTAGTCGTGAAGAGGTT+GGG | + | chr3.3:78667213-78667232 | MS.gene31045:CDS | 40.0% | |
| CAGTCTTGAGGTCATTAGAA+CGG | - | chr3.3:78667376-78667395 | None:intergenic | 40.0% | |
| CATCGACAAGAAATCTGTCA+GGG | - | chr3.3:78666881-78666900 | None:intergenic | 40.0% | |
| CATTGACCTAAGCTAGCAAA+AGG | - | chr3.3:78668745-78668764 | None:intergenic | 40.0% | |
| CGAATCCAATACTGGACAAT+TGG | - | chr3.3:78668664-78668683 | None:intergenic | 40.0% | |
| CTATAGAGGATGATCAACCA+GGG | + | chr3.3:78667153-78667172 | MS.gene31045:CDS | 40.0% | |
| CTCACGTGATATTGCTATAG+AGG | + | chr3.3:78667139-78667158 | MS.gene31045:CDS | 40.0% | |
| GTATTTGGAGACAAGCTAGA+TGG | + | chr3.3:78666972-78666991 | MS.gene31045:CDS | 40.0% | |
| TCAATTAGTCGTGAAGAGGT+TGG | + | chr3.3:78667212-78667231 | MS.gene31045:CDS | 40.0% | |
| TTTGTCTGCAGTGTTGTGAT+TGG | - | chr3.3:78668631-78668650 | None:intergenic | 40.0% | |
| ! | AATCATCGGCTAGCAATGAA+GGG | + | chr3.3:78667057-78667076 | MS.gene31045:CDS | 40.0% |
| ! | AATTGATGTCTGGCTTACAC+TGG | - | chr3.3:78666822-78666841 | None:intergenic | 40.0% |
| ! | GCGATATTAGTTTACACCGA+CGG | + | chr3.3:78668023-78668042 | MS.gene31045:intron | 40.0% |
| ! | TGCATAGACTGTCTTATTGC+TGG | + | chr3.3:78667575-78667594 | MS.gene31045:CDS | 40.0% |
| !! | CTTTTGCTAGCTTAGGTCAA+TGG | + | chr3.3:78668743-78668762 | MS.gene31045:CDS | 40.0% |
| !! | TCGAAGGTATTTGATGACCA+AGG | + | chr3.3:78668781-78668800 | MS.gene31045:CDS | 40.0% |
| !! | TTTAACCAGGTCACTGACTT+TGG | - | chr3.3:78668307-78668326 | None:intergenic | 40.0% |
| AAGGCAGACAAACAGTGGAA+CGG | - | chr3.3:78666764-78666783 | None:intergenic | 45.0% | |
| ACTCGTGATATTGCTTTGCG+TGG | + | chr3.3:78667260-78667279 | MS.gene31045:CDS | 45.0% | |
| ACTTGTTCCAAGAACAAGGC+AGG | + | chr3.3:78665636-78665655 | MS.gene31045:CDS | 45.0% | |
| AGCTTGTCTCCAAATACCTG+TGG | - | chr3.3:78666969-78666988 | None:intergenic | 45.0% | |
| ATGACAATGTTGCTGACCGT+TGG | - | chr3.3:78668423-78668442 | None:intergenic | 45.0% | |
| ATGTGTATAGACACACTGGG+AGG | + | chr3.3:78668508-78668527 | MS.gene31045:CDS | 45.0% | |
| CCAAGGATCAGTTATGTCGA+CGG | + | chr3.3:78668798-78668817 | MS.gene31045:CDS | 45.0% | |
| CGACACTTGTTCCAAGAACA+AGG | + | chr3.3:78665632-78665651 | MS.gene31045:CDS | 45.0% | |
| CTCGTGATATTGCTTTGCGT+GGG | + | chr3.3:78667261-78667280 | MS.gene31045:CDS | 45.0% | |
| GACCAAGTTCAACAGTCTTG+AGG | - | chr3.3:78667388-78667407 | None:intergenic | 45.0% | |
| GACCTCAAGACTGTTGAACT+TGG | + | chr3.3:78667383-78667402 | MS.gene31045:CDS | 45.0% | |
| GCTATAGAGGATGATCAACC+AGG | + | chr3.3:78667152-78667171 | MS.gene31045:CDS | 45.0% | |
| GCTGTTATGGCTCAGGTAAA+CGG | + | chr3.3:78665825-78665844 | MS.gene31045:intron | 45.0% | |
| GCTTTGTACGCAATCCTTCA+CGG | + | chr3.3:78668604-78668623 | MS.gene31045:CDS | 45.0% | |
| GGGATCCAATTGTCCAGTAT+TGG | + | chr3.3:78668656-78668675 | MS.gene31045:CDS | 45.0% | |
| GTCTCCAGATCATCTTTCGT+CGG | + | chr3.3:78666387-78666406 | MS.gene31045:CDS | 45.0% | |
| GTGAAGGATTGCGTACAAAG+CGG | - | chr3.3:78668605-78668624 | None:intergenic | 45.0% | |
| GTGGAGCGAAACAAACCATT+TGG | - | chr3.3:78667295-78667314 | None:intergenic | 45.0% | |
| GTTTACCTGAGCCATAACAG+CGG | - | chr3.3:78665826-78665845 | None:intergenic | 45.0% | |
| TCCCAGTGTGTCTATACACA+TGG | - | chr3.3:78668509-78668528 | None:intergenic | 45.0% | |
| TCTACAAGGCAGACAAACAG+TGG | - | chr3.3:78666769-78666788 | None:intergenic | 45.0% | |
| TGGATCATGTACTCCAGAAG+AGG | + | chr3.3:78667670-78667689 | MS.gene31045:CDS | 45.0% | |
| TGGGAGGAAGTGGTTACATT+TGG | + | chr3.3:78668524-78668543 | MS.gene31045:CDS | 45.0% | |
| TGGGTTTCCTCTTGGAATGT+CGG | + | chr3.3:78665797-78665816 | MS.gene31045:CDS | 45.0% | |
| TTCCAAGAACAAGGCAGGTT+TGG | + | chr3.3:78665641-78665660 | MS.gene31045:CDS | 45.0% | |
| TTGCGTATCTGCTCTTCCAA+CGG | + | chr3.3:78668404-78668423 | MS.gene31045:CDS | 45.0% | |
| TTGTCTCCAAATACCTGTGG+CGG | - | chr3.3:78666966-78666985 | None:intergenic | 45.0% | |
| TTTAGGAACCTTCCTACTGG+TGG | + | chr3.3:78668278-78668297 | MS.gene31045:intron | 45.0% | |
| ! | GAATCATCGGCTAGCAATGA+AGG | + | chr3.3:78667056-78667075 | MS.gene31045:CDS | 45.0% |
| ! | GTGGTTCTACCATTGTGTTG+TGG | + | chr3.3:78668712-78668731 | MS.gene31045:CDS | 45.0% |
| ! | TTCCAAACCTGCCTTGTTCT+TGG | - | chr3.3:78665646-78665665 | None:intergenic | 45.0% |
| ! | TTGTCCAGTATTGGATTCGC+CGG | + | chr3.3:78668665-78668684 | MS.gene31045:CDS | 45.0% |
| !! | CTTCTGCCTTTTGCTAGCTT+AGG | + | chr3.3:78668736-78668755 | MS.gene31045:CDS | 45.0% |
| !! | GAACGGATTAATGAAGCTGC+TGG | + | chr3.3:78667650-78667669 | MS.gene31045:CDS | 45.0% |
| AGTCTCTGTTCGTCGCACAA+GGG | + | chr3.3:78665755-78665774 | MS.gene31045:CDS | 50.0% | |
| ATAGACACACTGGGAGGAAG+TGG | + | chr3.3:78668514-78668533 | MS.gene31045:CDS | 50.0% | |
| CCGTCGACATAACTGATCCT+TGG | - | chr3.3:78668801-78668820 | None:intergenic | 50.0% | |
| CGCAGATGTGCACATCTACA+AGG | - | chr3.3:78666783-78666802 | None:intergenic | 50.0% | |
| GAAACCGGCGAATCCAATAC+TGG | - | chr3.3:78668672-78668691 | None:intergenic | 50.0% | |
| GCAGAGATCCAAGTTAGCTG+TGG | + | chr3.3:78667472-78667491 | MS.gene31045:CDS | 50.0% | |
| GCAGCTATTGGGTTTCCTCT+TGG | + | chr3.3:78665789-78665808 | MS.gene31045:CDS | 50.0% | |
| GCGTGGGCAATCAAACCAAA+TGG | + | chr3.3:78667277-78667296 | MS.gene31045:CDS | 50.0% | |
| GCTAAAGCTCCAGAAGAGTG+TGG | - | chr3.3:78667314-78667333 | None:intergenic | 50.0% | |
| GGCAGAAGACCACAACACAA+TGG | - | chr3.3:78668724-78668743 | None:intergenic | 50.0% | |
| GGTTGGGGATAACTTCCACA+TGG | + | chr3.3:78667229-78667248 | MS.gene31045:CDS | 50.0% | |
| GTTGTGAGCCGAATGGTGTT+TGG | + | chr3.3:78668361-78668380 | MS.gene31045:CDS | 50.0% | |
| TGCGACGAACAGAGACTCTA+GGG | - | chr3.3:78665752-78665771 | None:intergenic | 50.0% | |
| TGTCTCCAAATACCTGTGGC+GGG | - | chr3.3:78666965-78666984 | None:intergenic | 50.0% | |
| TGTTTCGCTCCACACTCTTC+TGG | + | chr3.3:78667302-78667321 | MS.gene31045:CDS | 50.0% | |
| TTGATGCTAGGAATCGGCTG+TGG | + | chr3.3:78668472-78668491 | MS.gene31045:CDS | 50.0% | |
| ! | CACGAGTAACTGACTCCATG+TGG | - | chr3.3:78667247-78667266 | None:intergenic | 50.0% |
| ! | GTGTTGTGATTGGTCCGTGA+AGG | - | chr3.3:78668621-78668640 | None:intergenic | 50.0% |
| ! | TCGACGGTGTTTGATGACCA+AGG | + | chr3.3:78668814-78668833 | MS.gene31045:CDS | 50.0% |
| ! | TTTGGAGTCCACCAGTAGGA+AGG | - | chr3.3:78668289-78668308 | None:intergenic | 50.0% |
| !! | AGTTCGAGTTGTGAGCCGAA+TGG | + | chr3.3:78668354-78668373 | MS.gene31045:intron | 50.0% |
| !! | TGACTTTGGAGTCCACCAGT+AGG | - | chr3.3:78668293-78668312 | None:intergenic | 50.0% |
| AATGTCGGTCGCCGCTGTTA+TGG | + | chr3.3:78665812-78665831 | MS.gene31045:CDS | 55.0% | |
| ATTTCTGCCTATCCCGCCAC+AGG | + | chr3.3:78666950-78666969 | MS.gene31045:intron | 55.0% | |
| CACGCGGACATCACTTCAAC+AGG | - | chr3.3:78666918-78666937 | None:intergenic | 55.0% | |
| CCTATCCCGCCACAGGTATT+TGG | + | chr3.3:78666957-78666976 | MS.gene31045:intron | 55.0% | |
| GAAAGTGGGACATGCACCGT+CGG | - | chr3.3:78668042-78668061 | None:intergenic | 55.0% | |
| GAGTCTCTGTTCGTCGCACA+AGG | + | chr3.3:78665754-78665773 | MS.gene31045:CDS | 55.0% | |
| GGAATCGGCTGTGGCTATTG+TGG | + | chr3.3:78668481-78668500 | MS.gene31045:CDS | 55.0% | |
| GGACTCCAAAGTCAGTGACC+TGG | + | chr3.3:78668299-78668318 | MS.gene31045:intron | 55.0% | |
| GTCTCTGTTCGTCGCACAAG+GGG | + | chr3.3:78665756-78665775 | MS.gene31045:CDS | 55.0% | |
| GTGCGACGAACAGAGACTCT+AGG | - | chr3.3:78665753-78665772 | None:intergenic | 55.0% | |
| TGTGCGTGTGATAGTAGCCC+TGG | - | chr3.3:78667173-78667192 | None:intergenic | 55.0% | |
| ! | CCAAATACCTGTGGCGGGAT+AGG | - | chr3.3:78666960-78666979 | None:intergenic | 55.0% |
| GCGGCGACCGACATTCCAAG+AGG | - | chr3.3:78665807-78665826 | None:intergenic | 65.0% | |
| GGTCGCCGCTGTTATGGCTC+AGG | + | chr3.3:78665818-78665837 | MS.gene31045:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 78665621 | 78668849 | 78665621 | ID=MS.gene31045 |
| chr3.3 | mRNA | 78665621 | 78668849 | 78665621 | ID=MS.gene31045.t1;Parent=MS.gene31045 |
| chr3.3 | exon | 78665621 | 78665839 | 78665621 | ID=MS.gene31045.t1.exon1;Parent=MS.gene31045.t1 |
| chr3.3 | CDS | 78665621 | 78665839 | 78665621 | ID=cds.MS.gene31045.t1;Parent=MS.gene31045.t1 |
| chr3.3 | exon | 78666352 | 78666408 | 78666352 | ID=MS.gene31045.t1.exon2;Parent=MS.gene31045.t1 |
| chr3.3 | CDS | 78666352 | 78666408 | 78666352 | ID=cds.MS.gene31045.t1;Parent=MS.gene31045.t1 |
| chr3.3 | exon | 78666788 | 78666823 | 78666788 | ID=MS.gene31045.t1.exon3;Parent=MS.gene31045.t1 |
| chr3.3 | CDS | 78666788 | 78666823 | 78666788 | ID=cds.MS.gene31045.t1;Parent=MS.gene31045.t1 |
| chr3.3 | exon | 78666972 | 78667695 | 78666972 | ID=MS.gene31045.t1.exon4;Parent=MS.gene31045.t1 |
| chr3.3 | CDS | 78666972 | 78667695 | 78666972 | ID=cds.MS.gene31045.t1;Parent=MS.gene31045.t1 |
| chr3.3 | exon | 78668356 | 78668849 | 78668356 | ID=MS.gene31045.t1.exon5;Parent=MS.gene31045.t1 |
| chr3.3 | CDS | 78668356 | 78668849 | 78668356 | ID=cds.MS.gene31045.t1;Parent=MS.gene31045.t1 |
| Gene Sequence |
| Protein sequence |
