Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46390.t1 | XP_013457568.1 | 93.5 | 321 | 21 | 0 | 20 | 340 | 105 | 425 | 6.90E-66 | 261.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46390.t1 | A0A072UP26 | 93.5 | 321 | 21 | 0 | 20 | 340 | 105 | 425 | 5.0e-66 | 261.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04920 | MS.gene46390 | 0.812587 | 3.93E-51 | -1.69E-46 |
MS.gene049283 | MS.gene46390 | 0.827989 | 1.15E-54 | -1.69E-46 |
MS.gene049499 | MS.gene46390 | 0.814678 | 1.36E-51 | -1.69E-46 |
MS.gene049580 | MS.gene46390 | 0.811358 | 7.29E-51 | -1.69E-46 |
MS.gene049680 | MS.gene46390 | 0.82603 | 3.39E-54 | -1.69E-46 |
MS.gene050646 | MS.gene46390 | 0.809182 | 2.15E-50 | -1.69E-46 |
MS.gene050752 | MS.gene46390 | 0.814882 | 1.23E-51 | -1.69E-46 |
MS.gene050945 | MS.gene46390 | 0.874591 | 5.99E-68 | -1.69E-46 |
MS.gene050955 | MS.gene46390 | 0.816655 | 4.94E-52 | -1.69E-46 |
MS.gene051043 | MS.gene46390 | 0.831904 | 1.28E-55 | -1.69E-46 |
MS.gene051154 | MS.gene46390 | 0.824763 | 6.77E-54 | -1.69E-46 |
MS.gene051343 | MS.gene46390 | 0.826499 | 2.62E-54 | -1.69E-46 |
MS.gene051676 | MS.gene46390 | 0.813919 | 2.01E-51 | -1.69E-46 |
MS.gene051699 | MS.gene46390 | 0.877224 | 7.46E-69 | -1.69E-46 |
MS.gene051731 | MS.gene46390 | 0.806859 | 6.70E-50 | -1.69E-46 |
MS.gene051832 | MS.gene46390 | 0.828332 | 9.54E-55 | -1.69E-46 |
MS.gene051902 | MS.gene46390 | 0.815667 | 8.22E-52 | -1.69E-46 |
MS.gene051903 | MS.gene46390 | 0.810133 | 1.34E-50 | -1.69E-46 |
MS.gene051959 | MS.gene46390 | 0.802617 | 5.15E-49 | -1.69E-46 |
MS.gene051960 | MS.gene46390 | 0.800965 | 1.13E-48 | -1.69E-46 |
MS.gene051975 | MS.gene46390 | 0.812626 | 3.86E-51 | -1.69E-46 |
MS.gene052072 | MS.gene46390 | 0.819464 | 1.15E-52 | -1.69E-46 |
MS.gene052239 | MS.gene46390 | -0.810311 | 1.23E-50 | -1.69E-46 |
MS.gene052242 | MS.gene46390 | -0.815345 | 9.70E-52 | -1.69E-46 |
MS.gene052296 | MS.gene46390 | 0.820412 | 6.96E-53 | -1.69E-46 |
MS.gene052533 | MS.gene46390 | 0.806441 | 8.21E-50 | -1.69E-46 |
MS.gene052793 | MS.gene46390 | 0.842158 | 3.07E-58 | -1.69E-46 |
MS.gene052947 | MS.gene46390 | 0.820109 | 8.16E-53 | -1.69E-46 |
MS.gene053045 | MS.gene46390 | 0.814054 | 1.87E-51 | -1.69E-46 |
MS.gene053189 | MS.gene46390 | 0.840813 | 6.94E-58 | -1.69E-46 |
MS.gene053340 | MS.gene46390 | 0.800937 | 1.14E-48 | -1.69E-46 |
MS.gene053401 | MS.gene46390 | 0.826924 | 2.08E-54 | -1.69E-46 |
MS.gene053564 | MS.gene46390 | 0.813981 | 1.94E-51 | -1.69E-46 |
MS.gene053879 | MS.gene46390 | 0.819258 | 1.28E-52 | -1.69E-46 |
MS.gene053963 | MS.gene46390 | 0.853603 | 2.14E-61 | -1.69E-46 |
MS.gene054222 | MS.gene46390 | 0.83485 | 2.36E-56 | -1.69E-46 |
MS.gene054403 | MS.gene46390 | 0.821683 | 3.54E-53 | -1.69E-46 |
MS.gene054413 | MS.gene46390 | 0.839257 | 1.77E-57 | -1.69E-46 |
MS.gene054490 | MS.gene46390 | 0.802709 | 4.93E-49 | -1.69E-46 |
MS.gene05469 | MS.gene46390 | 0.825514 | 4.50E-54 | -1.69E-46 |
MS.gene054893 | MS.gene46390 | 0.802502 | 5.44E-49 | -1.69E-46 |
MS.gene054957 | MS.gene46390 | 0.804636 | 1.96E-49 | -1.69E-46 |
MS.gene055150 | MS.gene46390 | 0.827439 | 1.56E-54 | -1.69E-46 |
MS.gene05548 | MS.gene46390 | 0.814577 | 1.44E-51 | -1.69E-46 |
MS.gene055555 | MS.gene46390 | 0.800203 | 1.61E-48 | -1.69E-46 |
MS.gene056677 | MS.gene46390 | 0.815343 | 9.70E-52 | -1.69E-46 |
MS.gene05689 | MS.gene46390 | 0.811215 | 7.83E-51 | -1.69E-46 |
MS.gene056986 | MS.gene46390 | 0.818709 | 1.70E-52 | -1.69E-46 |
MS.gene057102 | MS.gene46390 | 0.847364 | 1.21E-59 | -1.69E-46 |
MS.gene057622 | MS.gene46390 | 0.803708 | 3.06E-49 | -1.69E-46 |
MS.gene057694 | MS.gene46390 | 0.832131 | 1.13E-55 | -1.69E-46 |
MS.gene057705 | MS.gene46390 | 0.828214 | 1.02E-54 | -1.69E-46 |
MS.gene057890 | MS.gene46390 | -0.802741 | 4.86E-49 | -1.69E-46 |
MS.gene057893 | MS.gene46390 | -0.802532 | 5.37E-49 | -1.69E-46 |
MS.gene057999 | MS.gene46390 | 0.841834 | 3.74E-58 | -1.69E-46 |
MS.gene058074 | MS.gene46390 | 0.863576 | 2.26E-64 | -1.69E-46 |
MS.gene058159 | MS.gene46390 | 0.826587 | 2.50E-54 | -1.69E-46 |
MS.gene058279 | MS.gene46390 | 0.80351 | 3.37E-49 | -1.69E-46 |
MS.gene058592 | MS.gene46390 | 0.83237 | 9.83E-56 | -1.69E-46 |
MS.gene059146 | MS.gene46390 | 0.805056 | 1.60E-49 | -1.69E-46 |
MS.gene059227 | MS.gene46390 | 0.801606 | 8.32E-49 | -1.69E-46 |
MS.gene05952 | MS.gene46390 | 0.847975 | 8.23E-60 | -1.69E-46 |
MS.gene05985 | MS.gene46390 | -0.8716 | 6.04E-67 | -1.69E-46 |
MS.gene059901 | MS.gene46390 | -0.808356 | 3.22E-50 | -1.69E-46 |
MS.gene06018 | MS.gene46390 | 0.821759 | 3.40E-53 | -1.69E-46 |
MS.gene060244 | MS.gene46390 | 0.837413 | 5.28E-57 | -1.69E-46 |
MS.gene060365 | MS.gene46390 | 0.838843 | 2.26E-57 | -1.69E-46 |
MS.gene060763 | MS.gene46390 | 0.803188 | 3.93E-49 | -1.69E-46 |
MS.gene060933 | MS.gene46390 | 0.81744 | 3.29E-52 | -1.69E-46 |
MS.gene060935 | MS.gene46390 | 0.816412 | 5.61E-52 | -1.69E-46 |
MS.gene060937 | MS.gene46390 | 0.827774 | 1.30E-54 | -1.69E-46 |
MS.gene060977 | MS.gene46390 | 0.800621 | 1.32E-48 | -1.69E-46 |
MS.gene061100 | MS.gene46390 | 0.817308 | 3.53E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46390.t1 | MTR_4g099180 | 94.081 | 321 | 19 | 0 | 20 | 340 | 105 | 425 | 0.0 | 583 |
MS.gene46390.t1 | MTR_7g451440 | 64.307 | 339 | 105 | 3 | 15 | 338 | 107 | 444 | 2.95e-141 | 407 |
MS.gene46390.t1 | MTR_4g099180 | 90.164 | 183 | 18 | 0 | 20 | 202 | 105 | 287 | 1.41e-118 | 345 |
MS.gene46390.t1 | MTR_4g099180 | 97.605 | 167 | 4 | 0 | 37 | 203 | 122 | 288 | 1.45e-118 | 345 |
MS.gene46390.t1 | MTR_8g007500 | 68.340 | 259 | 81 | 1 | 83 | 340 | 193 | 451 | 2.42e-117 | 347 |
MS.gene46390.t1 | MTR_5g058920 | 52.326 | 344 | 123 | 6 | 16 | 333 | 105 | 433 | 3.69e-102 | 308 |
MS.gene46390.t1 | MTR_3g072650 | 51.622 | 339 | 120 | 6 | 22 | 333 | 100 | 421 | 4.35e-101 | 305 |
MS.gene46390.t1 | MTR_3g072650 | 54.244 | 271 | 90 | 5 | 22 | 265 | 100 | 363 | 1.04e-96 | 292 |
MS.gene46390.t1 | MTR_8g080860 | 37.500 | 200 | 102 | 2 | 84 | 260 | 13 | 212 | 1.70e-31 | 120 |
MS.gene46390.t1 | MTR_8g080860 | 33.168 | 202 | 112 | 1 | 85 | 263 | 37 | 238 | 1.94e-27 | 109 |
MS.gene46390.t1 | MTR_8g080860 | 37.654 | 162 | 101 | 0 | 83 | 244 | 104 | 265 | 1.24e-26 | 107 |
MS.gene46390.t1 | MTR_8g080860 | 35.227 | 176 | 114 | 0 | 87 | 262 | 85 | 260 | 3.14e-26 | 105 |
MS.gene46390.t1 | MTR_8g080860 | 32.090 | 134 | 91 | 0 | 130 | 263 | 13 | 146 | 1.88e-17 | 81.6 |
MS.gene46390.t1 | MTR_8g080860 | 37.500 | 200 | 102 | 2 | 84 | 260 | 17 | 216 | 2.00e-31 | 120 |
MS.gene46390.t1 | MTR_8g080860 | 33.168 | 202 | 112 | 1 | 85 | 263 | 41 | 242 | 2.31e-27 | 108 |
MS.gene46390.t1 | MTR_8g080860 | 37.654 | 162 | 101 | 0 | 83 | 244 | 108 | 269 | 1.50e-26 | 107 |
MS.gene46390.t1 | MTR_8g080860 | 35.227 | 176 | 114 | 0 | 87 | 262 | 89 | 264 | 3.60e-26 | 105 |
MS.gene46390.t1 | MTR_8g080860 | 32.090 | 134 | 91 | 0 | 130 | 263 | 17 | 150 | 2.17e-17 | 81.6 |
MS.gene46390.t1 | MTR_8g088930 | 35.955 | 178 | 114 | 0 | 86 | 263 | 12 | 189 | 8.52e-29 | 117 |
MS.gene46390.t1 | MTR_8g088930 | 35.036 | 137 | 89 | 0 | 127 | 263 | 7 | 143 | 4.26e-19 | 89.0 |
MS.gene46390.t1 | MTR_8g088930 | 36.364 | 143 | 83 | 2 | 63 | 200 | 56 | 195 | 3.64e-14 | 73.9 |
MS.gene46390.t1 | MTR_8g088930 | 35.955 | 178 | 114 | 0 | 86 | 263 | 12 | 189 | 8.59e-29 | 117 |
MS.gene46390.t1 | MTR_8g088930 | 35.036 | 137 | 89 | 0 | 127 | 263 | 7 | 143 | 4.18e-19 | 89.0 |
MS.gene46390.t1 | MTR_8g088930 | 36.364 | 143 | 83 | 2 | 63 | 200 | 56 | 195 | 3.45e-14 | 73.9 |
MS.gene46390.t1 | MTR_8g088930 | 35.955 | 178 | 114 | 0 | 86 | 263 | 12 | 189 | 9.16e-29 | 117 |
MS.gene46390.t1 | MTR_8g088930 | 35.036 | 137 | 89 | 0 | 127 | 263 | 7 | 143 | 5.12e-19 | 88.6 |
MS.gene46390.t1 | MTR_8g088930 | 36.364 | 143 | 83 | 2 | 63 | 200 | 56 | 195 | 3.79e-14 | 73.9 |
MS.gene46390.t1 | MTR_8g088930 | 35.955 | 178 | 114 | 0 | 86 | 263 | 12 | 189 | 9.44e-29 | 117 |
MS.gene46390.t1 | MTR_8g088930 | 35.036 | 137 | 89 | 0 | 127 | 263 | 7 | 143 | 5.27e-19 | 88.6 |
MS.gene46390.t1 | MTR_8g088930 | 36.364 | 143 | 83 | 2 | 63 | 200 | 56 | 195 | 3.94e-14 | 73.9 |
MS.gene46390.t1 | MTR_8g092090 | 34.314 | 204 | 103 | 2 | 86 | 258 | 8 | 211 | 1.26e-27 | 108 |
MS.gene46390.t1 | MTR_8g092090 | 36.478 | 159 | 101 | 0 | 75 | 233 | 74 | 232 | 9.18e-24 | 98.6 |
MS.gene46390.t1 | MTR_8g092090 | 30.178 | 169 | 87 | 2 | 126 | 263 | 2 | 170 | 2.78e-13 | 68.9 |
MS.gene46390.t1 | MTR_4g107460 | 33.333 | 210 | 116 | 2 | 77 | 262 | 22 | 231 | 2.84e-27 | 110 |
MS.gene46390.t1 | MTR_4g107460 | 34.270 | 178 | 116 | 1 | 87 | 263 | 9 | 186 | 2.04e-23 | 99.4 |
MS.gene46390.t1 | MTR_4g107460 | 31.148 | 183 | 123 | 1 | 75 | 254 | 90 | 272 | 4.15e-20 | 90.1 |
MS.gene46390.t1 | MTR_1g050740 | 33.702 | 181 | 120 | 0 | 84 | 264 | 58 | 238 | 7.56e-26 | 108 |
MS.gene46390.t1 | MTR_1g050740 | 32.961 | 179 | 117 | 1 | 85 | 263 | 82 | 257 | 7.91e-20 | 90.9 |
MS.gene46390.t1 | MTR_3g073100 | 35.632 | 174 | 111 | 1 | 87 | 259 | 57 | 230 | 1.32e-24 | 105 |
MS.gene46390.t1 | MTR_3g073100 | 37.931 | 116 | 72 | 0 | 148 | 263 | 73 | 188 | 1.21e-17 | 84.3 |
MS.gene46390.t1 | MTR_8g039100 | 27.668 | 253 | 165 | 3 | 84 | 318 | 50 | 302 | 1.44e-24 | 105 |
MS.gene46390.t1 | MTR_8g039100 | 35.862 | 145 | 92 | 1 | 120 | 263 | 39 | 183 | 6.25e-18 | 85.5 |
MS.gene46390.t1 | MTR_5g459450 | 35.928 | 167 | 107 | 0 | 84 | 250 | 66 | 232 | 4.82e-24 | 103 |
MS.gene46390.t1 | MTR_5g459450 | 36.719 | 128 | 81 | 0 | 135 | 262 | 71 | 198 | 1.14e-18 | 87.4 |
MS.gene46390.t1 | MTR_5g459450 | 33.019 | 106 | 71 | 0 | 158 | 263 | 71 | 176 | 6.22e-12 | 67.0 |
MS.gene46390.t1 | MTR_3g097260 | 36.994 | 173 | 109 | 0 | 87 | 259 | 55 | 227 | 6.34e-24 | 103 |
MS.gene46390.t1 | MTR_3g097260 | 34.109 | 129 | 85 | 0 | 86 | 214 | 100 | 228 | 2.39e-14 | 74.3 |
MS.gene46390.t1 | MTR_3g097260 | 36.719 | 128 | 81 | 0 | 135 | 262 | 57 | 184 | 7.36e-12 | 67.0 |
MS.gene46390.t1 | MTR_7g089950 | 32.184 | 174 | 118 | 0 | 84 | 257 | 68 | 241 | 1.96e-23 | 101 |
MS.gene46390.t1 | MTR_8g095240 | 29.707 | 239 | 132 | 4 | 61 | 263 | 22 | 260 | 1.13e-22 | 98.2 |
MS.gene46390.t1 | MTR_8g095240 | 33.163 | 196 | 113 | 4 | 86 | 266 | 118 | 310 | 1.83e-22 | 97.8 |
MS.gene46390.t1 | MTR_8g095240 | 31.383 | 188 | 119 | 1 | 84 | 261 | 1 | 188 | 1.13e-20 | 92.4 |
MS.gene46390.t1 | MTR_8g095240 | 34.706 | 170 | 108 | 2 | 83 | 249 | 171 | 340 | 2.13e-20 | 91.7 |
MS.gene46390.t1 | MTR_3g014650 | 32.432 | 185 | 109 | 2 | 84 | 268 | 86 | 254 | 2.15e-21 | 95.9 |
MS.gene46390.t1 | MTR_3g014650 | 27.545 | 167 | 118 | 1 | 79 | 245 | 95 | 258 | 1.21e-13 | 72.4 |
MS.gene46390.t1 | MTR_1g062740 | 30.049 | 203 | 134 | 2 | 85 | 279 | 72 | 274 | 1.60e-20 | 93.2 |
MS.gene46390.t1 | MTR_1g062740 | 31.638 | 177 | 121 | 0 | 87 | 263 | 51 | 227 | 1.32e-19 | 90.5 |
MS.gene46390.t1 | MTR_1g062740 | 29.592 | 196 | 131 | 3 | 74 | 262 | 8 | 203 | 2.97e-18 | 86.3 |
MS.gene46390.t1 | MTR_8g095170 | 34.568 | 162 | 105 | 1 | 87 | 247 | 30 | 191 | 1.69e-20 | 92.8 |
MS.gene46390.t1 | MTR_8g095170 | 39.130 | 115 | 70 | 0 | 148 | 262 | 46 | 160 | 6.86e-17 | 82.0 |
MS.gene46390.t1 | MTR_8g095170 | 34.568 | 162 | 105 | 1 | 87 | 247 | 30 | 191 | 2.20e-20 | 92.4 |
MS.gene46390.t1 | MTR_8g095170 | 39.130 | 115 | 70 | 0 | 148 | 262 | 46 | 160 | 9.15e-17 | 81.6 |
MS.gene46390.t1 | MTR_8g080340 | 40.336 | 119 | 71 | 0 | 126 | 244 | 35 | 153 | 3.64e-20 | 86.7 |
MS.gene46390.t1 | MTR_8g080340 | 34.959 | 123 | 80 | 0 | 138 | 260 | 24 | 146 | 1.60e-16 | 76.6 |
MS.gene46390.t1 | MTR_8g080310 | 35.556 | 135 | 87 | 0 | 129 | 263 | 6 | 140 | 6.54e-20 | 85.5 |
MS.gene46390.t1 | MTR_8g080310 | 31.579 | 152 | 104 | 0 | 83 | 234 | 6 | 157 | 4.58e-17 | 77.8 |
MS.gene46390.t1 | MTR_6g043150 | 30.556 | 216 | 125 | 2 | 62 | 252 | 52 | 267 | 3.89e-19 | 87.0 |
MS.gene46390.t1 | MTR_6g043150 | 35.227 | 176 | 112 | 2 | 83 | 257 | 6 | 180 | 1.07e-18 | 85.9 |
MS.gene46390.t1 | MTR_6g043150 | 36.306 | 157 | 100 | 0 | 85 | 241 | 169 | 325 | 2.21e-18 | 85.1 |
MS.gene46390.t1 | MTR_6g043150 | 34.074 | 135 | 89 | 0 | 127 | 261 | 4 | 138 | 5.42e-16 | 78.2 |
MS.gene46390.t1 | MTR_2g078470 | 31.217 | 189 | 107 | 1 | 87 | 252 | 148 | 336 | 8.18e-19 | 86.7 |
MS.gene46390.t1 | MTR_2g078470 | 32.386 | 176 | 119 | 0 | 87 | 262 | 79 | 254 | 2.53e-17 | 82.4 |
MS.gene46390.t1 | MTR_2g078470 | 32.143 | 168 | 114 | 0 | 85 | 252 | 100 | 267 | 8.44e-17 | 80.9 |
MS.gene46390.t1 | MTR_2g078470 | 30.457 | 197 | 114 | 1 | 84 | 257 | 7 | 203 | 1.09e-16 | 80.5 |
MS.gene46390.t1 | MTR_2g078470 | 34.722 | 144 | 94 | 0 | 87 | 230 | 217 | 360 | 7.13e-14 | 72.4 |
MS.gene46390.t1 | MTR_5g010840 | 32.955 | 176 | 110 | 1 | 87 | 262 | 181 | 348 | 2.86e-17 | 82.4 |
MS.gene46390.t1 | MTR_5g010840 | 30.387 | 181 | 111 | 2 | 85 | 250 | 133 | 313 | 1.93e-15 | 77.0 |
MS.gene46390.t1 | MTR_5g010840 | 30.636 | 173 | 119 | 1 | 76 | 247 | 207 | 379 | 1.66e-13 | 71.2 |
MS.gene46390.t1 | MTR_5g010840 | 30.303 | 165 | 107 | 1 | 85 | 249 | 202 | 358 | 1.65e-12 | 68.2 |
MS.gene46390.t1 | MTR_8g080350 | 31.481 | 162 | 86 | 2 | 115 | 253 | 87 | 246 | 2.96e-13 | 70.5 |
MS.gene46390.t1 | MTR_8g080350 | 23.263 | 331 | 193 | 7 | 15 | 286 | 43 | 371 | 6.83e-13 | 69.3 |
MS.gene46390.t1 | MTR_8g092410 | 31.210 | 157 | 95 | 4 | 127 | 279 | 135 | 282 | 4.67e-13 | 69.7 |
MS.gene46390.t1 | MTR_8g092410 | 27.528 | 178 | 97 | 3 | 37 | 188 | 112 | 283 | 5.57e-12 | 66.6 |
MS.gene46390.t1 | MTR_3g023310 | 33.871 | 124 | 69 | 1 | 126 | 249 | 12 | 122 | 6.91e-12 | 63.9 |
MS.gene46390.t1 | MTR_3g023310 | 36.893 | 103 | 55 | 1 | 171 | 263 | 11 | 113 | 8.73e-12 | 63.5 |
MS.gene46390.t1 | MTR_1g112280 | 29.787 | 141 | 99 | 0 | 129 | 269 | 609 | 749 | 7.10e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46390.t1 | AT4G17080 | 65.705 | 312 | 99 | 2 | 26 | 331 | 192 | 501 | 8.79e-138 | 401 |
MS.gene46390.t1 | AT2G35170 | 64.336 | 286 | 96 | 3 | 26 | 307 | 163 | 446 | 2.85e-129 | 378 |
MS.gene46390.t1 | AT1G21920 | 54.799 | 323 | 116 | 5 | 26 | 333 | 103 | 410 | 2.67e-102 | 307 |
MS.gene46390.t1 | AT1G21920 | 58.333 | 252 | 85 | 4 | 26 | 262 | 103 | 349 | 4.74e-99 | 297 |
MS.gene46390.t1 | AT1G77660 | 54.294 | 326 | 116 | 8 | 26 | 333 | 104 | 414 | 4.24e-96 | 291 |
MS.gene46390.t1 | AT1G21980 | 36.842 | 171 | 108 | 0 | 87 | 257 | 76 | 246 | 8.78e-28 | 114 |
MS.gene46390.t1 | AT1G21980 | 37.500 | 128 | 80 | 0 | 135 | 262 | 78 | 205 | 5.47e-19 | 88.6 |
MS.gene46390.t1 | AT1G21980 | 30.370 | 135 | 93 | 1 | 86 | 219 | 121 | 255 | 1.97e-11 | 65.5 |
MS.gene46390.t1 | AT2G41210 | 36.207 | 174 | 111 | 0 | 84 | 257 | 67 | 240 | 2.73e-27 | 113 |
MS.gene46390.t1 | AT2G41210 | 38.281 | 128 | 79 | 0 | 135 | 262 | 72 | 199 | 4.60e-20 | 91.7 |
MS.gene46390.t1 | AT3G56960 | 32.955 | 176 | 118 | 0 | 84 | 259 | 69 | 244 | 1.96e-26 | 110 |
MS.gene46390.t1 | AT3G56960 | 36.719 | 128 | 81 | 0 | 135 | 262 | 74 | 201 | 1.69e-19 | 90.1 |
MS.gene46390.t1 | AT3G56960 | 32.955 | 176 | 118 | 0 | 84 | 259 | 69 | 244 | 1.96e-26 | 110 |
MS.gene46390.t1 | AT3G56960 | 36.719 | 128 | 81 | 0 | 135 | 262 | 74 | 201 | 1.69e-19 | 90.1 |
MS.gene46390.t1 | AT1G77740 | 35.673 | 171 | 110 | 0 | 87 | 257 | 77 | 247 | 2.96e-26 | 110 |
MS.gene46390.t1 | AT1G77740 | 36.719 | 128 | 81 | 0 | 135 | 262 | 79 | 206 | 1.98e-17 | 84.0 |
MS.gene46390.t1 | AT1G77740 | 33.962 | 106 | 70 | 0 | 158 | 263 | 79 | 184 | 5.30e-11 | 64.3 |
MS.gene46390.t1 | AT1G77740 | 35.673 | 171 | 110 | 0 | 87 | 257 | 77 | 247 | 2.96e-26 | 110 |
MS.gene46390.t1 | AT1G77740 | 36.719 | 128 | 81 | 0 | 135 | 262 | 79 | 206 | 1.98e-17 | 84.0 |
MS.gene46390.t1 | AT1G77740 | 33.962 | 106 | 70 | 0 | 158 | 263 | 79 | 184 | 5.30e-11 | 64.3 |
MS.gene46390.t1 | AT1G60890 | 34.270 | 178 | 94 | 1 | 84 | 261 | 8 | 162 | 1.05e-24 | 105 |
MS.gene46390.t1 | AT1G60890 | 30.942 | 223 | 150 | 3 | 86 | 305 | 33 | 254 | 7.03e-24 | 103 |
MS.gene46390.t1 | AT1G60890 | 34.270 | 178 | 94 | 1 | 84 | 261 | 20 | 174 | 1.11e-24 | 105 |
MS.gene46390.t1 | AT1G60890 | 30.942 | 223 | 150 | 3 | 86 | 305 | 45 | 266 | 7.28e-24 | 103 |
MS.gene46390.t1 | AT2G26420 | 34.392 | 189 | 120 | 2 | 84 | 272 | 50 | 234 | 6.01e-24 | 103 |
MS.gene46390.t1 | AT2G26420 | 34.392 | 189 | 120 | 2 | 84 | 272 | 50 | 234 | 6.01e-24 | 103 |
MS.gene46390.t1 | AT2G26420 | 34.392 | 189 | 120 | 2 | 84 | 272 | 50 | 234 | 6.34e-24 | 103 |
MS.gene46390.t1 | AT1G10900 | 35.625 | 160 | 103 | 0 | 86 | 245 | 33 | 192 | 1.22e-23 | 102 |
MS.gene46390.t1 | AT1G10900 | 34.831 | 178 | 116 | 0 | 86 | 263 | 10 | 187 | 2.96e-23 | 101 |
MS.gene46390.t1 | AT1G10900 | 30.769 | 156 | 85 | 1 | 128 | 260 | 6 | 161 | 4.79e-15 | 76.6 |
MS.gene46390.t1 | AT1G10900 | 32.639 | 144 | 89 | 2 | 62 | 200 | 53 | 193 | 1.30e-11 | 66.2 |
MS.gene46390.t1 | AT1G10900 | 35.625 | 160 | 103 | 0 | 86 | 245 | 33 | 192 | 1.22e-23 | 102 |
MS.gene46390.t1 | AT1G10900 | 34.831 | 178 | 116 | 0 | 86 | 263 | 10 | 187 | 2.96e-23 | 101 |
MS.gene46390.t1 | AT1G10900 | 30.769 | 156 | 85 | 1 | 128 | 260 | 6 | 161 | 4.79e-15 | 76.6 |
MS.gene46390.t1 | AT1G10900 | 32.639 | 144 | 89 | 2 | 62 | 200 | 53 | 193 | 1.30e-11 | 66.2 |
MS.gene46390.t1 | AT1G10900 | 35.625 | 160 | 103 | 0 | 86 | 245 | 33 | 192 | 1.22e-23 | 102 |
MS.gene46390.t1 | AT1G10900 | 34.831 | 178 | 116 | 0 | 86 | 263 | 10 | 187 | 2.96e-23 | 101 |
MS.gene46390.t1 | AT1G10900 | 30.769 | 156 | 85 | 1 | 128 | 260 | 6 | 161 | 4.79e-15 | 76.6 |
MS.gene46390.t1 | AT1G10900 | 32.639 | 144 | 89 | 2 | 62 | 200 | 53 | 193 | 1.30e-11 | 66.2 |
MS.gene46390.t1 | AT3G07960 | 32.258 | 186 | 122 | 1 | 84 | 269 | 24 | 205 | 1.62e-23 | 102 |
MS.gene46390.t1 | AT3G07960 | 32.258 | 186 | 122 | 1 | 84 | 269 | 24 | 205 | 1.62e-23 | 102 |
MS.gene46390.t1 | AT3G07960 | 32.258 | 186 | 122 | 1 | 84 | 269 | 24 | 205 | 1.75e-23 | 101 |
MS.gene46390.t1 | AT3G07960 | 32.258 | 186 | 122 | 1 | 84 | 269 | 24 | 205 | 2.30e-23 | 101 |
MS.gene46390.t1 | AT3G09920 | 27.413 | 259 | 167 | 2 | 69 | 315 | 23 | 272 | 4.59e-21 | 94.7 |
MS.gene46390.t1 | AT3G09920 | 29.808 | 208 | 134 | 3 | 85 | 283 | 74 | 278 | 2.96e-20 | 92.4 |
MS.gene46390.t1 | AT3G09920 | 27.413 | 259 | 167 | 2 | 69 | 315 | 23 | 272 | 4.59e-21 | 94.7 |
MS.gene46390.t1 | AT3G09920 | 29.808 | 208 | 134 | 3 | 85 | 283 | 74 | 278 | 2.96e-20 | 92.4 |
MS.gene46390.t1 | AT3G09920 | 27.413 | 259 | 167 | 2 | 69 | 315 | 23 | 272 | 4.59e-21 | 94.7 |
MS.gene46390.t1 | AT3G09920 | 29.808 | 208 | 134 | 3 | 85 | 283 | 74 | 278 | 2.96e-20 | 92.4 |
MS.gene46390.t1 | AT3G09920 | 27.413 | 259 | 167 | 2 | 69 | 315 | 23 | 272 | 4.59e-21 | 94.7 |
MS.gene46390.t1 | AT3G09920 | 29.808 | 208 | 134 | 3 | 85 | 283 | 74 | 278 | 2.96e-20 | 92.4 |
Find 89 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATTAGGACGGTACCATTTC+AGG | 0.220617 | 8.4:+23815971 | MS.gene46390:CDS |
AGAGCTTAAATTCTGGATCT+TGG | 0.306677 | 8.4:+23815611 | MS.gene46390:CDS |
CAACGTGTTGTATGGTCAAT+TGG | 0.311671 | 8.4:+23815568 | MS.gene46390:CDS |
TTTGAAGGTGATTGGATTGA+TGG | 0.327944 | 8.4:+23815730 | MS.gene46390:CDS |
TTTGGTGGTGATGTTTATAC+TGG | 0.359699 | 8.4:+23815853 | MS.gene46390:CDS |
GAGCTTAAATTCTGGATCTT+GGG | 0.376585 | 8.4:+23815612 | MS.gene46390:CDS |
CATATGAGTGGAAGATTTGA+AGG | 0.378466 | 8.4:+23815715 | MS.gene46390:CDS |
AAGGGTTTGAGGCATGGAAT+TGG | 0.379850 | 8.4:+23815817 | MS.gene46390:CDS |
GATTGAAACTTTGAGGTAAA+GGG | 0.380834 | 8.4:-23815355 | None:intergenic |
TTTCATAAGGGGAAGTGCTC+AGG | 0.382882 | 8.4:+23815673 | MS.gene46390:CDS |
ATTATGTTGGGGAATTCAAA+TGG | 0.385157 | 8.4:+23815935 | MS.gene46390:CDS |
TCAACGATCTTGAGAAGAAT+AGG | 0.388984 | 8.4:-23815513 | None:intergenic |
GTGGAAGATTTGAAGGTGAT+TGG | 0.394569 | 8.4:+23815722 | MS.gene46390:CDS |
TGGGGTGTTAAACATGGATT+AGG | 0.409371 | 8.4:+23815955 | MS.gene46390:CDS |
GGCATGGAATTGGAATTTAT+AGG | 0.412594 | 8.4:+23815827 | MS.gene46390:CDS |
GGAGTTCATACTTGCAATGA+TGG | 0.416556 | 8.4:+23815907 | MS.gene46390:CDS |
AAAAGCAAGACAGTCATATT+GGG | 0.421127 | 8.4:+23817385 | MS.gene46390:CDS |
AATGGTCAGTGTCATGGCTT+TGG | 0.421143 | 8.4:+23815886 | MS.gene46390:CDS |
TATGAAGGTGAGTTTCATAA+GGG | 0.426937 | 8.4:+23815661 | MS.gene46390:CDS |
GAGTTAAAGAGCTTAAATTC+TGG | 0.427388 | 8.4:+23815604 | MS.gene46390:CDS |
GCGGATATGATGCATGGCTT+TGG | 0.433142 | 8.4:+23817225 | MS.gene46390:CDS |
TGCTTGAGAAGCGTTGTTCA+TGG | 0.439654 | 8.4:-23815261 | None:intergenic |
TTATGAAGGTGAGTTTCATA+AGG | 0.441190 | 8.4:+23815660 | MS.gene46390:CDS |
AGTGTGGTCACTGGCAGAAT+GGG | 0.442429 | 8.4:+23817346 | MS.gene46390:CDS |
CATGCCACGCACCCTCATAT+CGG | 0.449588 | 8.4:-23817272 | None:intergenic |
TCAGAATGGTCACCGATATG+AGG | 0.450366 | 8.4:+23817260 | MS.gene46390:CDS |
CTCATCATCAACGTGTTGTA+TGG | 0.452247 | 8.4:+23815560 | MS.gene46390:CDS |
AGATTGAAACTTTGAGGTAA+AGG | 0.454037 | 8.4:-23815356 | None:intergenic |
GATGGAAAGTATGATGGGTT+TGG | 0.464094 | 8.4:+23815748 | MS.gene46390:CDS |
GAATAATAAGCTTTCTTCAT+CGG | 0.464931 | 8.4:+23815534 | MS.gene46390:CDS |
GTAGGTATCGTGGACAGTAT+AGG | 0.468147 | 8.4:+23815794 | MS.gene46390:CDS |
TTATGTTGGGGAATTCAAAT+GGG | 0.469276 | 8.4:+23815936 | MS.gene46390:CDS |
CAGTGTGGTCACTGGCAGAA+TGG | 0.474325 | 8.4:+23817345 | MS.gene46390:CDS |
GTAAAGGGTATTGTAAAAGA+AGG | 0.483157 | 8.4:-23815340 | None:intergenic |
TGGATTGATGGAAAGTATGA+TGG | 0.494170 | 8.4:+23815742 | MS.gene46390:CDS |
ATGATGGGAGTCATTATGTT+GGG | 0.495925 | 8.4:+23815923 | MS.gene46390:CDS |
AATGTCAAAGAAGGATGAAC+TGG | 0.498099 | 8.4:+23818108 | MS.gene46390:CDS |
TGAAGGAAGAAGACAAGGAC+TGG | 0.499777 | 8.4:+23817293 | MS.gene46390:CDS |
CTGGACAGCTTTGAAAACCT+TGG | 0.499930 | 8.4:-23817430 | None:intergenic |
GGTGTATGAGATGGTGAAGA+TGG | 0.507475 | 8.4:-23815289 | None:intergenic |
GGAGTCTATCAATTTCAGAA+TGG | 0.507486 | 8.4:+23817246 | MS.gene46390:CDS |
AACGTGTTGTATGGTCAATT+GGG | 0.513400 | 8.4:+23815569 | MS.gene46390:CDS |
TTCAAATGGGGTGTTAAACA+TGG | 0.513973 | 8.4:+23815949 | MS.gene46390:CDS |
TGGGTTCAAGTTTACAGCAA+TGG | 0.526362 | 8.4:+23815631 | MS.gene46390:CDS |
GTCAATTGGGTCAAAGGATG+AGG | 0.530313 | 8.4:+23815582 | MS.gene46390:CDS |
CATATCCGCAAAATATTCTC+CGG | 0.537617 | 8.4:-23817211 | None:intergenic |
TATAGGAAGGGTTTGAGGCA+TGG | 0.542708 | 8.4:+23815811 | MS.gene46390:CDS |
TATGAGGGTGCGTGGCATGA+AGG | 0.544188 | 8.4:+23817276 | MS.gene46390:CDS |
GTGATGTTTATACTGGTGAA+TGG | 0.551261 | 8.4:+23815860 | MS.gene46390:CDS |
GACAGTATAGGAAGGGTTTG+AGG | 0.555234 | 8.4:+23815806 | MS.gene46390:CDS |
GGGAAACACAGTGTGGTCAC+TGG | 0.556623 | 8.4:+23817337 | MS.gene46390:CDS |
ATCCTTCTTTGACATTCCGT+AGG | 0.560605 | 8.4:-23818101 | None:intergenic |
ATCATTGAACATTGTAATCA+CGG | 0.560703 | 8.4:-23818213 | None:intergenic |
AAGGGGAAGTGCTCAGGGAG+TGG | 0.561581 | 8.4:+23815679 | MS.gene46390:CDS |
GAGTTCATACTTGCAATGAT+GGG | 0.567190 | 8.4:+23815908 | MS.gene46390:CDS |
AGCTAGAGTTGCAGCTGTGA+AGG | 0.569793 | 8.4:+23818171 | MS.gene46390:CDS |
TTCATAAGGGGAAGTGCTCA+GGG | 0.572490 | 8.4:+23815674 | MS.gene46390:CDS |
TATACTGGTGAATGGTGTAA+TGG | 0.573863 | 8.4:+23815868 | MS.gene46390:CDS |
AGCAATGGTGATGTTTATGA+AGG | 0.574309 | 8.4:+23815646 | MS.gene46390:CDS |
CAGAATGGTCACCGATATGA+GGG | 0.575287 | 8.4:+23817261 | MS.gene46390:CDS |
CAGCTTTGAAAACCTTGGCA+TGG | 0.579822 | 8.4:-23817425 | None:intergenic |
AGCCTACGGAATGTCAAAGA+AGG | 0.581674 | 8.4:+23818099 | MS.gene46390:CDS |
GGATTGATGGAAAGTATGAT+GGG | 0.582051 | 8.4:+23815743 | MS.gene46390:CDS |
ATGGGTTTGGTGTTGAAACG+TGG | 0.586936 | 8.4:+23815761 | MS.gene46390:CDS |
GGTGTTGAAACGTGGGCTAG+AGG | 0.588676 | 8.4:+23815769 | MS.gene46390:CDS |
TTGTGTGTAGGTGTATGAGA+TGG | 0.591599 | 8.4:-23815298 | None:intergenic |
TGTATGGTCAATTGGGTCAA+AGG | 0.595542 | 8.4:+23815576 | MS.gene46390:CDS |
AGAAATGGGGACATATATGC+CGG | 0.598656 | 8.4:+23817192 | MS.gene46390:intron |
AAACGTGGGCTAGAGGAAGT+AGG | 0.599270 | 8.4:+23815776 | MS.gene46390:CDS |
TGGTGTAATGGTCAGTGTCA+TGG | 0.600058 | 8.4:+23815880 | MS.gene46390:CDS |
GAAGGAAGAAGACAAGGACT+GGG | 0.603856 | 8.4:+23817294 | MS.gene46390:CDS |
GTATCGTGGACAGTATAGGA+AGG | 0.617143 | 8.4:+23815798 | MS.gene46390:CDS |
TGAACAGGATGCTCATTGTG+CGG | 0.617594 | 8.4:+23818069 | MS.gene46390:intron |
GTCACCGATATGAGGGTGCG+TGG | 0.630941 | 8.4:+23817268 | MS.gene46390:CDS |
AATGATGGGAGTCATTATGT+TGG | 0.635184 | 8.4:+23815922 | MS.gene46390:CDS |
TTGTTATTACTGCAGAAATG+GGG | 0.635687 | 8.4:+23817179 | MS.gene46390:intron |
TGATGGGAGTCATTATGTTG+GGG | 0.636425 | 8.4:+23815924 | MS.gene46390:CDS |
TGTGCGGCGGAGAAAGCCTA+CGG | 0.641747 | 8.4:+23818085 | MS.gene46390:CDS |
TTGGCATGGTCTACAGCACA+TGG | 0.645980 | 8.4:-23817411 | None:intergenic |
ATGTGCTGTAGACCATGCCA+AGG | 0.647382 | 8.4:+23817413 | MS.gene46390:CDS |
TATCGTGGACAGTATAGGAA+GGG | 0.648017 | 8.4:+23815799 | MS.gene46390:CDS |
TATGTTGGGGAATTCAAATG+GGG | 0.656507 | 8.4:+23815937 | MS.gene46390:CDS |
TGGCATGAAGGAAGAAGACA+AGG | 0.660942 | 8.4:+23817288 | MS.gene46390:CDS |
TGGGTTTGGTGTTGAAACGT+GGG | 0.670518 | 8.4:+23815762 | MS.gene46390:CDS |
ATGAAGGTGAGTTTCATAAG+GGG | 0.671828 | 8.4:+23815662 | MS.gene46390:CDS |
GCTAGAGGAAGTAGGTATCG+TGG | 0.672052 | 8.4:+23815784 | MS.gene46390:CDS |
GTGTTAAACATGGATTAGGA+CGG | 0.683306 | 8.4:+23815959 | MS.gene46390:CDS |
ACAGGATGCTCATTGTGCGG+CGG | 0.690381 | 8.4:+23818072 | MS.gene46390:intron |
AGAAACGGGGAAACACAGTG+TGG | 0.759758 | 8.4:+23817330 | MS.gene46390:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTACTTTTTATGAATTAAA+AGG | + | chr8.4:23817537-23817556 | MS.gene46390:intron | 10.0% |
!!! | TTACTTTTTATGAATTAAAA+GGG | + | chr8.4:23817538-23817557 | MS.gene46390:intron | 10.0% |
!!! | AAGAGAATTTACTTTTATTT+GGG | + | chr8.4:23816302-23816321 | MS.gene46390:intron | 15.0% |
!!! | CAAAGCTTTATATAAAAAAT+GGG | - | chr8.4:23816481-23816500 | None:intergenic | 15.0% |
!!! | TAAGAGAATTTACTTTTATT+TGG | + | chr8.4:23816301-23816320 | MS.gene46390:intron | 15.0% |
!! | AAGTAAAAAATGATGAAATC+AGG | - | chr8.4:23817687-23817706 | None:intergenic | 20.0% |
!! | AATACAGATAAAAATCAAAC+TGG | - | chr8.4:23816886-23816905 | None:intergenic | 20.0% |
!! | AGTAAAAAATGATGAAATCA+GGG | - | chr8.4:23817686-23817705 | None:intergenic | 20.0% |
!! | ATGTCAATCAAATTGAATAA+TGG | - | chr8.4:23817061-23817080 | None:intergenic | 20.0% |
!! | CATAGTTATTACTTATTGTT+TGG | - | chr8.4:23818018-23818037 | None:intergenic | 20.0% |
!! | CTTAAAATGAACACAAAATT+GGG | - | chr8.4:23816285-23816304 | None:intergenic | 20.0% |
!! | TCTTAAAATGAACACAAAAT+TGG | - | chr8.4:23816286-23816305 | None:intergenic | 20.0% |
!! | TGTCAATCAAATTGAATAAT+GGG | - | chr8.4:23817060-23817079 | None:intergenic | 20.0% |
!!! | AGTTCAAAATTGTATTTTAG+TGG | - | chr8.4:23816132-23816151 | None:intergenic | 20.0% |
!!! | ATCATTTTTTACTTTCTACT+TGG | + | chr8.4:23817693-23817712 | MS.gene46390:intron | 20.0% |
!!! | ATTGGAATTTATAGGTTTTT+TGG | + | chr8.4:23815835-23815854 | MS.gene46390:CDS | 20.0% |
!!! | CATGATTATATATTGTTTTG+TGG | + | chr8.4:23817576-23817595 | MS.gene46390:intron | 20.0% |
!!! | CCAAAGCTTTATATAAAAAA+TGG | - | chr8.4:23816482-23816501 | None:intergenic | 20.0% |
!!! | CCATTTTTTATATAAAGCTT+TGG | + | chr8.4:23816479-23816498 | MS.gene46390:intron | 20.0% |
!!! | TCATTTTTTACTTTCTACTT+GGG | + | chr8.4:23817694-23817713 | MS.gene46390:intron | 20.0% |
! | AAAAAAGAACTAACCTGAAA+TGG | - | chr8.4:23815987-23816006 | None:intergenic | 25.0% |
! | AAACAGTCTTACAAATATGA+TGG | - | chr8.4:23817791-23817810 | None:intergenic | 25.0% |
! | ATCATATTTGTAAGACTGTT+TGG | + | chr8.4:23817790-23817809 | MS.gene46390:intron | 25.0% |
! | ATTTACTTTCAAAAGCCAAA+AGG | + | chr8.4:23816726-23816745 | MS.gene46390:intron | 25.0% |
! | CTAGCAATGTATAATGTAAT+TGG | + | chr8.4:23817083-23817102 | MS.gene46390:intron | 25.0% |
! | GAATAATAAGCTTTCTTCAT+CGG | + | chr8.4:23815534-23815553 | MS.gene46390:CDS | 25.0% |
! | TAAAATACTTGGAAAGTGAT+TGG | + | chr8.4:23816922-23816941 | MS.gene46390:intron | 25.0% |
! | TCATATTTGTAAGACTGTTT+GGG | + | chr8.4:23817791-23817810 | MS.gene46390:intron | 25.0% |
! | TGTATGTGTTTCTTCTAAAT+AGG | + | chr8.4:23816822-23816841 | MS.gene46390:intron | 25.0% |
! | TTATGTGAAAAACTACTGTA+AGG | + | chr8.4:23817513-23817532 | MS.gene46390:intron | 25.0% |
! | TTGTATCTAGCTAAAATACT+TGG | + | chr8.4:23816911-23816930 | MS.gene46390:intron | 25.0% |
! | TTTCATAAACTATCTTACAG+AGG | - | chr8.4:23817875-23817894 | None:intergenic | 25.0% |
!! | AGATTTGACATTATCTGTTT+TGG | + | chr8.4:23816157-23816176 | MS.gene46390:intron | 25.0% |
!! | GTTTATCATTTTCATATGAG+TGG | + | chr8.4:23815703-23815722 | MS.gene46390:CDS | 25.0% |
!!! | AAAAGAAGGTTTGTTTTGAT+GGG | - | chr8.4:23815329-23815348 | None:intergenic | 25.0% |
!!! | ATTTGTTATTACTGCAGAAA+TGG | + | chr8.4:23817177-23817196 | MS.gene46390:intron | 25.0% |
!!! | GATATTTATTTAGCTTTGGT+AGG | + | chr8.4:23816597-23816616 | MS.gene46390:intron | 25.0% |
!!! | GTACTTCTTTAATTTTGAAC+AGG | + | chr8.4:23818054-23818073 | MS.gene46390:intron | 25.0% |
!!! | TAAAAGAAGGTTTGTTTTGA+TGG | - | chr8.4:23815330-23815349 | None:intergenic | 25.0% |
!!! | TTTGTTATTACTGCAGAAAT+GGG | + | chr8.4:23817178-23817197 | MS.gene46390:intron | 25.0% |
AAAAAGCAAGACAGTCATAT+TGG | + | chr8.4:23817384-23817403 | MS.gene46390:CDS | 30.0% | |
AAAAGCAAGACAGTCATATT+GGG | + | chr8.4:23817385-23817404 | MS.gene46390:CDS | 30.0% | |
AAGAGAAAATCAAGAAGAGT+TGG | - | chr8.4:23815454-23815473 | None:intergenic | 30.0% | |
ATCCAAAAATGACTATTACC+TGG | - | chr8.4:23817452-23817471 | None:intergenic | 30.0% | |
ATTAACCACGATTCAGTATT+TGG | + | chr8.4:23816765-23816784 | MS.gene46390:intron | 30.0% | |
ATTATGTTGGGGAATTCAAA+TGG | + | chr8.4:23815935-23815954 | MS.gene46390:CDS | 30.0% | |
CTTGAAAGATTGAAACTTTG+AGG | - | chr8.4:23815365-23815384 | None:intergenic | 30.0% | |
GAGTTAAAGAGCTTAAATTC+TGG | + | chr8.4:23815604-23815623 | MS.gene46390:CDS | 30.0% | |
GGTTGAGACATTATATAGTT+TGG | - | chr8.4:23816865-23816884 | None:intergenic | 30.0% | |
GTCAAATTCTTCACATATAG+TGG | + | chr8.4:23816439-23816458 | MS.gene46390:intron | 30.0% | |
TAATTGTGTCAATGTCAAGT+CGG | + | chr8.4:23816337-23816356 | MS.gene46390:intron | 30.0% | |
TATGAAGGTGAGTTTCATAA+GGG | + | chr8.4:23815661-23815680 | MS.gene46390:CDS | 30.0% | |
TGAAAAGAGAAAGTAAAGAG+AGG | - | chr8.4:23815428-23815447 | None:intergenic | 30.0% | |
TTATGAAGGTGAGTTTCATA+AGG | + | chr8.4:23815660-23815679 | MS.gene46390:CDS | 30.0% | |
TTATGTTGGGGAATTCAAAT+GGG | + | chr8.4:23815936-23815955 | MS.gene46390:CDS | 30.0% | |
! | GTATACTTTTCTGCTTTCAT+GGG | + | chr8.4:23816787-23816806 | MS.gene46390:intron | 30.0% |
! | TAACCATTCTGATAATGCTA+AGG | - | chr8.4:23816048-23816067 | None:intergenic | 30.0% |
! | TTGTTATTACTGCAGAAATG+GGG | + | chr8.4:23817179-23817198 | MS.gene46390:intron | 30.0% |
!! | AATCACTTTTACAAGTTCAG+CGG | + | chr8.4:23816573-23816592 | MS.gene46390:intron | 30.0% |
!! | AATGTACACTTTTAGAAACG+GGG | + | chr8.4:23817317-23817336 | MS.gene46390:CDS | 30.0% |
!! | AGATTGAAACTTTGAGGTAA+AGG | - | chr8.4:23815359-23815378 | None:intergenic | 30.0% |
!! | GAATGTACACTTTTAGAAAC+GGG | + | chr8.4:23817316-23817335 | MS.gene46390:CDS | 30.0% |
!! | GATTGAAACTTTGAGGTAAA+GGG | - | chr8.4:23815358-23815377 | None:intergenic | 30.0% |
!! | GGAATGTACACTTTTAGAAA+CGG | + | chr8.4:23817315-23817334 | MS.gene46390:CDS | 30.0% |
!! | GTAAAGGGTATTGTAAAAGA+AGG | - | chr8.4:23815343-23815362 | None:intergenic | 30.0% |
!! | TGTTGATTCTTTGTTAAGTG+TGG | + | chr8.4:23816070-23816089 | MS.gene46390:intron | 30.0% |
!!! | ATATGACTGTCTTGCTTTTT+AGG | - | chr8.4:23817384-23817403 | None:intergenic | 30.0% |
!!! | GGAATTTATAGGTTTTTTGG+TGG | + | chr8.4:23815838-23815857 | MS.gene46390:CDS | 30.0% |
!!! | TATGACTGTCTTGCTTTTTA+GGG | - | chr8.4:23817383-23817402 | None:intergenic | 30.0% |
AAATCAGGGAATGTCTATTC+AGG | - | chr8.4:23817672-23817691 | None:intergenic | 35.0% | |
AACGTGTTGTATGGTCAATT+GGG | + | chr8.4:23815569-23815588 | MS.gene46390:CDS | 35.0% | |
AACTTGACCATATTCTTGCA+CGG | - | chr8.4:23817003-23817022 | None:intergenic | 35.0% | |
AATGTCAAAGAAGGATGAAC+TGG | + | chr8.4:23818108-23818127 | MS.gene46390:CDS | 35.0% | |
ACTTGTAAAAGTGATTGGCA+AGG | - | chr8.4:23816569-23816588 | None:intergenic | 35.0% | |
AGAGCTTAAATTCTGGATCT+TGG | + | chr8.4:23815611-23815630 | MS.gene46390:CDS | 35.0% | |
ATAGTGGTCATTGTGATTCT+AGG | + | chr8.4:23816455-23816474 | MS.gene46390:intron | 35.0% | |
ATCGTGGTTAATGAGAAACT+AGG | - | chr8.4:23816757-23816776 | None:intergenic | 35.0% | |
ATGAAGGTGAGTTTCATAAG+GGG | + | chr8.4:23815662-23815681 | MS.gene46390:CDS | 35.0% | |
CAGGTTGTTGAAAATTTGAG+TGG | - | chr8.4:23816518-23816537 | None:intergenic | 35.0% | |
CATATCCGCAAAATATTCTC+CGG | - | chr8.4:23817214-23817233 | None:intergenic | 35.0% | |
CATATGAGTGGAAGATTTGA+AGG | + | chr8.4:23815715-23815734 | MS.gene46390:CDS | 35.0% | |
CTAGTACAACAGAATGTTGT+TGG | - | chr8.4:23816649-23816668 | None:intergenic | 35.0% | |
CTTTCAAAAGCCAAAAGGAT+TGG | + | chr8.4:23816731-23816750 | MS.gene46390:intron | 35.0% | |
GAGAAAGTAAAGAGAGGTTA+AGG | - | chr8.4:23815422-23815441 | None:intergenic | 35.0% | |
GAGCTTAAATTCTGGATCTT+GGG | + | chr8.4:23815612-23815631 | MS.gene46390:CDS | 35.0% | |
GAGTTCATACTTGCAATGAT+GGG | + | chr8.4:23815908-23815927 | MS.gene46390:CDS | 35.0% | |
GCAAGGTAAATGAATCAAAC+AGG | - | chr8.4:23816552-23816571 | None:intergenic | 35.0% | |
GCTGAACTTGTAAAAGTGAT+TGG | - | chr8.4:23816574-23816593 | None:intergenic | 35.0% | |
GCTGCAAACACTTAATTAAG+TGG | + | chr8.4:23817987-23818006 | MS.gene46390:intron | 35.0% | |
GGAGTCTATCAATTTCAGAA+TGG | + | chr8.4:23817246-23817265 | MS.gene46390:CDS | 35.0% | |
GGCATGGAATTGGAATTTAT+AGG | + | chr8.4:23815827-23815846 | MS.gene46390:CDS | 35.0% | |
GTATACCAAATACTGAATCG+TGG | - | chr8.4:23816773-23816792 | None:intergenic | 35.0% | |
GTCAATTAAAATAAGCCCTC+AGG | - | chr8.4:23817742-23817761 | None:intergenic | 35.0% | |
GTGATGTTTATACTGGTGAA+TGG | + | chr8.4:23815860-23815879 | MS.gene46390:CDS | 35.0% | |
GTTCCTTAGCATTATCAGAA+TGG | + | chr8.4:23816042-23816061 | MS.gene46390:intron | 35.0% | |
TATACTGGTGAATGGTGTAA+TGG | + | chr8.4:23815868-23815887 | MS.gene46390:CDS | 35.0% | |
TATGTTGGGGAATTCAAATG+GGG | + | chr8.4:23815937-23815956 | MS.gene46390:CDS | 35.0% | |
TCAACGATCTTGAGAAGAAT+AGG | - | chr8.4:23815516-23815535 | None:intergenic | 35.0% | |
TGTTGTTGGCATTGTTTGTT+CGG | - | chr8.4:23816635-23816654 | None:intergenic | 35.0% | |
TTCTTTGTTAAGTGTGGACT+TGG | + | chr8.4:23816076-23816095 | MS.gene46390:intron | 35.0% | |
TTTGAAGGTGATTGGATTGA+TGG | + | chr8.4:23815730-23815749 | MS.gene46390:CDS | 35.0% | |
! | AATGATGGGAGTCATTATGT+TGG | + | chr8.4:23815922-23815941 | MS.gene46390:CDS | 35.0% |
! | AGCAATGGTGATGTTTATGA+AGG | + | chr8.4:23815646-23815665 | MS.gene46390:CDS | 35.0% |
! | ATATGCCGGAGAATATTTTG+CGG | + | chr8.4:23817206-23817225 | MS.gene46390:CDS | 35.0% |
! | ATGATGGGAGTCATTATGTT+GGG | + | chr8.4:23815923-23815942 | MS.gene46390:CDS | 35.0% |
! | CGGCGATATTTATTTAGCTT+TGG | + | chr8.4:23816593-23816612 | MS.gene46390:intron | 35.0% |
! | CTCAAATTTTCAACAACCTG+TGG | + | chr8.4:23816518-23816537 | MS.gene46390:intron | 35.0% |
! | CTGACTTCAATCTGAAGTAT+TGG | + | chr8.4:23816386-23816405 | MS.gene46390:intron | 35.0% |
! | GGATTGATGGAAAGTATGAT+GGG | + | chr8.4:23815743-23815762 | MS.gene46390:CDS | 35.0% |
! | GGTATACTTTTCTGCTTTCA+TGG | + | chr8.4:23816786-23816805 | MS.gene46390:intron | 35.0% |
! | TATTTTGCGGATATGATGCA+TGG | + | chr8.4:23817219-23817238 | MS.gene46390:CDS | 35.0% |
! | TGGATTGATGGAAAGTATGA+TGG | + | chr8.4:23815742-23815761 | MS.gene46390:CDS | 35.0% |
! | TTCAAATGGGGTGTTAAACA+TGG | + | chr8.4:23815949-23815968 | MS.gene46390:CDS | 35.0% |
!! | GTCCAGGTAATAGTCATTTT+TGG | + | chr8.4:23817447-23817466 | MS.gene46390:intron | 35.0% |
!! | GTGTTAAACATGGATTAGGA+CGG | + | chr8.4:23815959-23815978 | MS.gene46390:CDS | 35.0% |
!! | TTTGGTGGTGATGTTTATAC+TGG | + | chr8.4:23815853-23815872 | MS.gene46390:CDS | 35.0% |
ACTGTATCCGTGCAAGAATA+TGG | + | chr8.4:23816993-23817012 | MS.gene46390:intron | 40.0% | |
AGAAATGGGGACATATATGC+CGG | + | chr8.4:23817192-23817211 | MS.gene46390:intron | 40.0% | |
AGCTGTCGAAGCTAATTTCA+AGG | - | chr8.4:23817141-23817160 | None:intergenic | 40.0% | |
AGTCAGATTGAATGCATGTC+TGG | - | chr8.4:23816372-23816391 | None:intergenic | 40.0% | |
ATCCTTCTTTGACATTCCGT+AGG | - | chr8.4:23818104-23818123 | None:intergenic | 40.0% | |
ATGGCAACACCAAAGATACA+AGG | - | chr8.4:23817606-23817625 | None:intergenic | 40.0% | |
ATGTCCATCACGAATCATGA+TGG | - | chr8.4:23817625-23817644 | None:intergenic | 40.0% | |
CAACGTGTTGTATGGTCAAT+TGG | + | chr8.4:23815568-23815587 | MS.gene46390:CDS | 40.0% | |
CTCATCATCAACGTGTTGTA+TGG | + | chr8.4:23815560-23815579 | MS.gene46390:CDS | 40.0% | |
GGAGTTCATACTTGCAATGA+TGG | + | chr8.4:23815907-23815926 | MS.gene46390:CDS | 40.0% | |
GTGGAAGATTTGAAGGTGAT+TGG | + | chr8.4:23815722-23815741 | MS.gene46390:CDS | 40.0% | |
GTTAAGTGTGGACTTGGATT+AGG | + | chr8.4:23816082-23816101 | MS.gene46390:intron | 40.0% | |
TACTTTCTACTTGGGCTTTC+TGG | + | chr8.4:23817702-23817721 | MS.gene46390:intron | 40.0% | |
TATCGTGGACAGTATAGGAA+GGG | + | chr8.4:23815799-23815818 | MS.gene46390:CDS | 40.0% | |
TGATGGGAGTCATTATGTTG+GGG | + | chr8.4:23815924-23815943 | MS.gene46390:CDS | 40.0% | |
TGTATGGTCAATTGGGTCAA+AGG | + | chr8.4:23815576-23815595 | MS.gene46390:CDS | 40.0% | |
TGTCGAAGCTAATTTCAAGG+AGG | - | chr8.4:23817138-23817157 | None:intergenic | 40.0% | |
TGTGGCTTTCCTTGTATCTT+TGG | + | chr8.4:23817594-23817613 | MS.gene46390:intron | 40.0% | |
TTGTGTGTAGGTGTATGAGA+TGG | - | chr8.4:23815301-23815320 | None:intergenic | 40.0% | |
! | AGAAACTAGGCCAATCCTTT+TGG | - | chr8.4:23816744-23816763 | None:intergenic | 40.0% |
! | ATAAGCCCTCAGGTTGTTTA+AGG | - | chr8.4:23817732-23817751 | None:intergenic | 40.0% |
! | TGGGGTGTTAAACATGGATT+AGG | + | chr8.4:23815955-23815974 | MS.gene46390:CDS | 40.0% |
! | TGGGTTCAAGTTTACAGCAA+TGG | + | chr8.4:23815631-23815650 | MS.gene46390:CDS | 40.0% |
!! | GATGGAAAGTATGATGGGTT+TGG | + | chr8.4:23815748-23815767 | MS.gene46390:CDS | 40.0% |
!!! | GTTTTGGTTAAGTGTGCTTC+TGG | + | chr8.4:23816173-23816192 | MS.gene46390:intron | 40.0% |
!!! | TGATGGGTTTTGTTGTGTGT+AGG | - | chr8.4:23815313-23815332 | None:intergenic | 40.0% |
AATGGTCAGTGTCATGGCTT+TGG | + | chr8.4:23815886-23815905 | MS.gene46390:CDS | 45.0% | |
AGCCTACGGAATGTCAAAGA+AGG | + | chr8.4:23818099-23818118 | MS.gene46390:CDS | 45.0% | |
CAGAATGGTCACCGATATGA+GGG | + | chr8.4:23817261-23817280 | MS.gene46390:CDS | 45.0% | |
GAAGGAAGAAGACAAGGACT+GGG | + | chr8.4:23817294-23817313 | MS.gene46390:CDS | 45.0% | |
GACAGTATAGGAAGGGTTTG+AGG | + | chr8.4:23815806-23815825 | MS.gene46390:CDS | 45.0% | |
GATTAGGACGGTACCATTTC+AGG | + | chr8.4:23815971-23815990 | MS.gene46390:CDS | 45.0% | |
GGTGTATGAGATGGTGAAGA+TGG | - | chr8.4:23815292-23815311 | None:intergenic | 45.0% | |
GTATCGTGGACAGTATAGGA+AGG | + | chr8.4:23815798-23815817 | MS.gene46390:CDS | 45.0% | |
GTCAATTGGGTCAAAGGATG+AGG | + | chr8.4:23815582-23815601 | MS.gene46390:CDS | 45.0% | |
GTGGACCTTAAACAACCTGA+GGG | + | chr8.4:23817724-23817743 | MS.gene46390:intron | 45.0% | |
GTTGCCATCATGATTCGTGA+TGG | + | chr8.4:23817618-23817637 | MS.gene46390:intron | 45.0% | |
TCAGAATGGTCACCGATATG+AGG | + | chr8.4:23817260-23817279 | MS.gene46390:CDS | 45.0% | |
TGAACAGGATGCTCATTGTG+CGG | + | chr8.4:23818069-23818088 | MS.gene46390:intron | 45.0% | |
TGAAGGAAGAAGACAAGGAC+TGG | + | chr8.4:23817293-23817312 | MS.gene46390:CDS | 45.0% | |
TGGCATGAAGGAAGAAGACA+AGG | + | chr8.4:23817288-23817307 | MS.gene46390:CDS | 45.0% | |
TGGTGTAATGGTCAGTGTCA+TGG | + | chr8.4:23815880-23815899 | MS.gene46390:CDS | 45.0% | |
TGTCAATGTCAAGTCGGTGT+CGG | + | chr8.4:23816343-23816362 | MS.gene46390:intron | 45.0% | |
TTTCTACTTGGGCTTTCTGG+TGG | + | chr8.4:23817705-23817724 | MS.gene46390:intron | 45.0% | |
! | AAGGGTTTGAGGCATGGAAT+TGG | + | chr8.4:23815817-23815836 | MS.gene46390:CDS | 45.0% |
! | CAAGGTTTTCAAAGCTGTCC+AGG | + | chr8.4:23817431-23817450 | MS.gene46390:CDS | 45.0% |
! | GTAGGTATCGTGGACAGTAT+AGG | + | chr8.4:23815794-23815813 | MS.gene46390:CDS | 45.0% |
! | TATAGGAAGGGTTTGAGGCA+TGG | + | chr8.4:23815811-23815830 | MS.gene46390:CDS | 45.0% |
! | TTCTGGTTGTTTGATGCAGC+AGG | + | chr8.4:23816190-23816209 | MS.gene46390:intron | 45.0% |
!! | ATGGGTTTGGTGTTGAAACG+TGG | + | chr8.4:23815761-23815780 | MS.gene46390:CDS | 45.0% |
!! | CAGCTTTGAAAACCTTGGCA+TGG | - | chr8.4:23817428-23817447 | None:intergenic | 45.0% |
!! | CTGGACAGCTTTGAAAACCT+TGG | - | chr8.4:23817433-23817452 | None:intergenic | 45.0% |
!! | GCAGCAGGACTTTGATTTTC+TGG | + | chr8.4:23816205-23816224 | MS.gene46390:intron | 45.0% |
!! | TGGGTTTGGTGTTGAAACGT+GGG | + | chr8.4:23815762-23815781 | MS.gene46390:CDS | 45.0% |
!! | TTCATAAGGGGAAGTGCTCA+GGG | + | chr8.4:23815674-23815693 | MS.gene46390:CDS | 45.0% |
!! | TTTCATAAGGGGAAGTGCTC+AGG | + | chr8.4:23815673-23815692 | MS.gene46390:CDS | 45.0% |
AGAAACGGGGAAACACAGTG+TGG | + | chr8.4:23817330-23817349 | MS.gene46390:CDS | 50.0% | |
AGCTAGAGTTGCAGCTGTGA+AGG | + | chr8.4:23818171-23818190 | MS.gene46390:CDS | 50.0% | |
AGTGTGGTCACTGGCAGAAT+GGG | + | chr8.4:23817346-23817365 | MS.gene46390:CDS | 50.0% | |
ATGTGCTGTAGACCATGCCA+AGG | + | chr8.4:23817413-23817432 | MS.gene46390:CDS | 50.0% | |
CAAACAGGTGCTTCAACCAC+AGG | - | chr8.4:23816537-23816556 | None:intergenic | 50.0% | |
GCGGATATGATGCATGGCTT+TGG | + | chr8.4:23817225-23817244 | MS.gene46390:CDS | 50.0% | |
GGTGGACCTTAAACAACCTG+AGG | + | chr8.4:23817723-23817742 | MS.gene46390:intron | 50.0% | |
TTGGCATGGTCTACAGCACA+TGG | - | chr8.4:23817414-23817433 | None:intergenic | 50.0% | |
! | GCTAGAGGAAGTAGGTATCG+TGG | + | chr8.4:23815784-23815803 | MS.gene46390:CDS | 50.0% |
!! | AAACGTGGGCTAGAGGAAGT+AGG | + | chr8.4:23815776-23815795 | MS.gene46390:CDS | 50.0% |
ACAGGATGCTCATTGTGCGG+CGG | + | chr8.4:23818072-23818091 | MS.gene46390:intron | 55.0% | |
CAGTGTGGTCACTGGCAGAA+TGG | + | chr8.4:23817345-23817364 | MS.gene46390:CDS | 55.0% | |
CATGCCACGCACCCTCATAT+CGG | - | chr8.4:23817275-23817294 | None:intergenic | 55.0% | |
GGGAAACACAGTGTGGTCAC+TGG | + | chr8.4:23817337-23817356 | MS.gene46390:CDS | 55.0% | |
! | TATGAGGGTGCGTGGCATGA+AGG | + | chr8.4:23817276-23817295 | MS.gene46390:CDS | 55.0% |
!! | GGTGTTGAAACGTGGGCTAG+AGG | + | chr8.4:23815769-23815788 | MS.gene46390:CDS | 55.0% |
TGTGCGGCGGAGAAAGCCTA+CGG | + | chr8.4:23818085-23818104 | MS.gene46390:CDS | 60.0% | |
! | GTCACCGATATGAGGGTGCG+TGG | + | chr8.4:23817268-23817287 | MS.gene46390:CDS | 60.0% |
!! | AAGGGGAAGTGCTCAGGGAG+TGG | + | chr8.4:23815679-23815698 | MS.gene46390:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 23815263 | 23818234 | 23815263 | ID=MS.gene46390 |
chr8.4 | mRNA | 23815263 | 23818234 | 23815263 | ID=MS.gene46390.t1;Parent=MS.gene46390 |
chr8.4 | exon | 23815263 | 23815368 | 23815263 | ID=MS.gene46390.t1.exon1;Parent=MS.gene46390.t1 |
chr8.4 | CDS | 23815263 | 23815368 | 23815263 | ID=cds.MS.gene46390.t1;Parent=MS.gene46390.t1 |
chr8.4 | exon | 23815494 | 23815992 | 23815494 | ID=MS.gene46390.t1.exon2;Parent=MS.gene46390.t1 |
chr8.4 | CDS | 23815494 | 23815992 | 23815494 | ID=cds.MS.gene46390.t1;Parent=MS.gene46390.t1 |
chr8.4 | exon | 23817194 | 23817452 | 23817194 | ID=MS.gene46390.t1.exon3;Parent=MS.gene46390.t1 |
chr8.4 | CDS | 23817194 | 23817452 | 23817194 | ID=cds.MS.gene46390.t1;Parent=MS.gene46390.t1 |
chr8.4 | exon | 23818076 | 23818234 | 23818076 | ID=MS.gene46390.t1.exon4;Parent=MS.gene46390.t1 |
chr8.4 | CDS | 23818076 | 23818234 | 23818076 | ID=cds.MS.gene46390.t1;Parent=MS.gene46390.t1 |
Gene Sequence |
Protein sequence |