Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49722.t1 | RHN43172.1 | 97.2 | 723 | 16 | 2 | 1 | 723 | 24 | 742 | 0.00E+00 | 1378.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49722.t1 | A0A396GPY7 | 97.2 | 723 | 16 | 2 | 1 | 723 | 24 | 742 | 0.0e+00 | 1378.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene49722 | 0.877902 | 4.33E-69 | -1.69E-46 |
| MS.gene049369 | MS.gene49722 | 0.903485 | 3.31E-79 | -1.69E-46 |
| MS.gene049396 | MS.gene49722 | 0.883832 | 3.21E-71 | -1.69E-46 |
| MS.gene049609 | MS.gene49722 | 0.829517 | 4.93E-55 | -1.69E-46 |
| MS.gene049907 | MS.gene49722 | 0.844115 | 9.23E-59 | -1.69E-46 |
| MS.gene050122 | MS.gene49722 | 0.807296 | 5.42E-50 | -1.69E-46 |
| MS.gene050499 | MS.gene49722 | 0.831958 | 1.24E-55 | -1.69E-46 |
| MS.gene050502 | MS.gene49722 | 0.821295 | 4.36E-53 | -1.69E-46 |
| MS.gene050520 | MS.gene49722 | 0.852637 | 4.05E-61 | -1.69E-46 |
| MS.gene050593 | MS.gene49722 | 0.805981 | 1.03E-49 | -1.69E-46 |
| MS.gene050662 | MS.gene49722 | 0.80179 | 7.63E-49 | -1.69E-46 |
| MS.gene050686 | MS.gene49722 | 0.821036 | 5.00E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene49722 | 0.847725 | 9.64E-60 | -1.69E-46 |
| MS.gene05080 | MS.gene49722 | 0.822059 | 2.90E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene49722 | 0.803163 | 3.97E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene49722 | 0.8624 | 5.21E-64 | -1.69E-46 |
| MS.gene051228 | MS.gene49722 | 0.801623 | 8.25E-49 | -1.69E-46 |
| MS.gene051255 | MS.gene49722 | 0.844027 | 9.75E-59 | -1.69E-46 |
| MS.gene051360 | MS.gene49722 | 0.841795 | 3.83E-58 | -1.69E-46 |
| MS.gene051509 | MS.gene49722 | 0.842348 | 2.73E-58 | -1.69E-46 |
| MS.gene051734 | MS.gene49722 | 0.836897 | 7.15E-57 | -1.69E-46 |
| MS.gene051858 | MS.gene49722 | 0.824303 | 8.68E-54 | -1.69E-46 |
| MS.gene051874 | MS.gene49722 | 0.840921 | 6.50E-58 | -1.69E-46 |
| MS.gene052188 | MS.gene49722 | 0.809021 | 2.32E-50 | -1.69E-46 |
| MS.gene052346 | MS.gene49722 | 0.813861 | 2.07E-51 | -1.69E-46 |
| MS.gene052414 | MS.gene49722 | 0.8108 | 9.63E-51 | -1.69E-46 |
| MS.gene052421 | MS.gene49722 | 0.809353 | 1.97E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene49722 | 0.807029 | 6.17E-50 | -1.69E-46 |
| MS.gene052485 | MS.gene49722 | 0.808753 | 2.65E-50 | -1.69E-46 |
| MS.gene052870 | MS.gene49722 | 0.823089 | 1.67E-53 | -1.69E-46 |
| MS.gene052872 | MS.gene49722 | 0.815999 | 6.93E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene49722 | 0.815259 | 1.01E-51 | -1.69E-46 |
| MS.gene052999 | MS.gene49722 | 0.820678 | 6.04E-53 | -1.69E-46 |
| MS.gene053018 | MS.gene49722 | 0.82079 | 5.69E-53 | -1.69E-46 |
| MS.gene053169 | MS.gene49722 | 0.81336 | 2.66E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene49722 | 0.806696 | 7.26E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene49722 | 0.808992 | 2.36E-50 | -1.69E-46 |
| MS.gene053449 | MS.gene49722 | 0.872655 | 2.69E-67 | -1.69E-46 |
| MS.gene053505 | MS.gene49722 | 0.838894 | 2.19E-57 | -1.69E-46 |
| MS.gene053574 | MS.gene49722 | 0.844451 | 7.50E-59 | -1.69E-46 |
| MS.gene053626 | MS.gene49722 | 0.817093 | 3.94E-52 | -1.69E-46 |
| MS.gene053813 | MS.gene49722 | 0.836253 | 1.04E-56 | -1.69E-46 |
| MS.gene053824 | MS.gene49722 | 0.828844 | 7.17E-55 | -1.69E-46 |
| MS.gene053912 | MS.gene49722 | 0.838498 | 2.78E-57 | -1.69E-46 |
| MS.gene053916 | MS.gene49722 | 0.850715 | 1.42E-60 | -1.69E-46 |
| MS.gene05494 | MS.gene49722 | 0.884758 | 1.46E-71 | -1.69E-46 |
| MS.gene05505 | MS.gene49722 | 0.867105 | 1.75E-65 | -1.69E-46 |
| MS.gene055224 | MS.gene49722 | 0.845338 | 4.32E-59 | -1.69E-46 |
| MS.gene055666 | MS.gene49722 | 0.803171 | 3.96E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene49722 | 0.865137 | 7.35E-65 | -1.69E-46 |
| MS.gene055741 | MS.gene49722 | 0.827356 | 1.64E-54 | -1.69E-46 |
| MS.gene055744 | MS.gene49722 | 0.824133 | 9.52E-54 | -1.69E-46 |
| MS.gene055909 | MS.gene49722 | 0.831971 | 1.23E-55 | -1.69E-46 |
| MS.gene055911 | MS.gene49722 | 0.829533 | 4.88E-55 | -1.69E-46 |
| MS.gene05592 | MS.gene49722 | 0.851989 | 6.20E-61 | -1.69E-46 |
| MS.gene055941 | MS.gene49722 | 0.811979 | 5.34E-51 | -1.69E-46 |
| MS.gene056422 | MS.gene49722 | 0.883688 | 3.63E-71 | -1.69E-46 |
| MS.gene056448 | MS.gene49722 | 0.830748 | 2.47E-55 | -1.69E-46 |
| MS.gene056487 | MS.gene49722 | 0.808151 | 3.57E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene49722 | 0.857984 | 1.12E-62 | -1.69E-46 |
| MS.gene05666 | MS.gene49722 | 0.81405 | 1.88E-51 | -1.69E-46 |
| MS.gene056947 | MS.gene49722 | 0.846859 | 1.67E-59 | -1.69E-46 |
| MS.gene057076 | MS.gene49722 | 0.84444 | 7.55E-59 | -1.69E-46 |
| MS.gene057086 | MS.gene49722 | 0.81127 | 7.61E-51 | -1.69E-46 |
| MS.gene057289 | MS.gene49722 | 0.819335 | 1.23E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene49722 | 0.839544 | 1.49E-57 | -1.69E-46 |
| MS.gene05735 | MS.gene49722 | 0.80743 | 5.07E-50 | -1.69E-46 |
| MS.gene057537 | MS.gene49722 | 0.816386 | 5.68E-52 | -1.69E-46 |
| MS.gene057734 | MS.gene49722 | 0.840021 | 1.12E-57 | -1.69E-46 |
| MS.gene057926 | MS.gene49722 | 0.853513 | 2.27E-61 | -1.69E-46 |
| MS.gene057927 | MS.gene49722 | 0.802157 | 6.41E-49 | -1.69E-46 |
| MS.gene058075 | MS.gene49722 | 0.839273 | 1.75E-57 | -1.69E-46 |
| MS.gene058120 | MS.gene49722 | 0.867145 | 1.70E-65 | -1.69E-46 |
| MS.gene058130 | MS.gene49722 | 0.820729 | 5.88E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene49722 | 0.802869 | 4.57E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene49722 | 0.802175 | 6.36E-49 | -1.69E-46 |
| MS.gene058459 | MS.gene49722 | 0.881033 | 3.36E-70 | -1.69E-46 |
| MS.gene058723 | MS.gene49722 | 0.801629 | 8.23E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene49722 | 0.801754 | 7.76E-49 | -1.69E-46 |
| MS.gene058948 | MS.gene49722 | 0.860784 | 1.62E-63 | -1.69E-46 |
| MS.gene058978 | MS.gene49722 | -0.805686 | 1.18E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene49722 | 0.814189 | 1.75E-51 | -1.69E-46 |
| MS.gene05913 | MS.gene49722 | 0.863895 | 1.80E-64 | -1.69E-46 |
| MS.gene059305 | MS.gene49722 | 0.822326 | 2.51E-53 | -1.69E-46 |
| MS.gene059366 | MS.gene49722 | 0.843475 | 1.37E-58 | -1.69E-46 |
| MS.gene059367 | MS.gene49722 | 0.841803 | 3.81E-58 | -1.69E-46 |
| MS.gene059368 | MS.gene49722 | 0.848605 | 5.51E-60 | -1.69E-46 |
| MS.gene059517 | MS.gene49722 | 0.80937 | 1.96E-50 | -1.69E-46 |
| MS.gene059674 | MS.gene49722 | 0.864165 | 1.48E-64 | -1.69E-46 |
| MS.gene059680 | MS.gene49722 | 0.847972 | 8.24E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene49722 | 0.814694 | 1.35E-51 | -1.69E-46 |
| MS.gene059711 | MS.gene49722 | 0.88935 | 2.62E-73 | -1.69E-46 |
| MS.gene059807 | MS.gene49722 | 0.874006 | 9.46E-68 | -1.69E-46 |
| MS.gene05986 | MS.gene49722 | 0.844777 | 6.13E-59 | -1.69E-46 |
| MS.gene059902 | MS.gene49722 | 0.814015 | 1.91E-51 | -1.69E-46 |
| MS.gene059974 | MS.gene49722 | 0.816739 | 4.73E-52 | -1.69E-46 |
| MS.gene060372 | MS.gene49722 | 0.834254 | 3.33E-56 | -1.69E-46 |
| MS.gene060482 | MS.gene49722 | 0.815943 | 7.14E-52 | -1.69E-46 |
| MS.gene060569 | MS.gene49722 | 0.805093 | 1.58E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene49722 | 0.827326 | 1.66E-54 | -1.69E-46 |
| MS.gene060818 | MS.gene49722 | 0.820024 | 8.54E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene49722 | 0.847412 | 1.18E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene49722 | 0.905282 | 5.06E-80 | -1.69E-46 |
| MS.gene06097 | MS.gene49722 | 0.83811 | 3.49E-57 | -1.69E-46 |
| MS.gene061041 | MS.gene49722 | 0.837366 | 5.42E-57 | -1.69E-46 |
| MS.gene061154 | MS.gene49722 | 0.819541 | 1.10E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49722.t1 | MTR_8g094800 | 97.095 | 723 | 17 | 2 | 1 | 723 | 24 | 742 | 0.0 | 1441 |
| MS.gene49722.t1 | MTR_8g094800 | 96.434 | 617 | 18 | 2 | 1 | 617 | 24 | 636 | 0.0 | 1219 |
| MS.gene49722.t1 | MTR_1g085550 | 34.807 | 181 | 102 | 4 | 65 | 230 | 77 | 256 | 1.71e-19 | 89.7 |
| MS.gene49722.t1 | MTR_1g085550 | 26.768 | 198 | 112 | 6 | 318 | 486 | 71 | 264 | 5.02e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49722.t1 | AT5G08720 | 65.374 | 722 | 211 | 13 | 21 | 723 | 17 | 718 | 0.0 | 903 |
| MS.gene49722.t1 | AT4G01650 | 35.106 | 188 | 104 | 5 | 60 | 230 | 10 | 196 | 4.32e-21 | 92.8 |
| MS.gene49722.t1 | AT4G01650 | 32.934 | 167 | 88 | 6 | 338 | 482 | 38 | 202 | 1.28e-17 | 82.8 |
| MS.gene49722.t1 | AT4G01650 | 35.294 | 187 | 103 | 5 | 61 | 230 | 88 | 273 | 1.06e-20 | 93.6 |
| MS.gene49722.t1 | AT4G01650 | 32.934 | 167 | 88 | 6 | 338 | 482 | 115 | 279 | 4.30e-17 | 82.8 |
| MS.gene49722.t1 | AT4G01650 | 41.353 | 133 | 72 | 3 | 61 | 188 | 88 | 219 | 3.22e-19 | 87.8 |
| MS.gene49722.t1 | AT4G01650 | 36.449 | 107 | 59 | 3 | 338 | 435 | 115 | 221 | 2.16e-14 | 73.6 |
Find 165 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTACTGATTGCTAAATT+TGG | 0.126575 | 4.4:-7871036 | None:intergenic |
| CAGGAAATTGTGATGCTTTC+CGG | 0.135896 | 4.4:-7871861 | None:intergenic |
| AAAACTTCTTTGGTTGTTAA+TGG | 0.150554 | 4.4:+7870475 | MS.gene49722:CDS |
| TAAAAGAGTTGGACATAAAT+TGG | 0.162386 | 4.4:+7872885 | MS.gene49722:CDS |
| AACAGCAATTGGGGTATATT+TGG | 0.184340 | 4.4:+7870619 | MS.gene49722:CDS |
| CATTGAAGCTCGTGTTGTTT+TGG | 0.228996 | 4.4:+7869805 | MS.gene49722:CDS |
| TATTCAAATTTCCACCTAAA+TGG | 0.230001 | 4.4:-7869197 | None:intergenic |
| CATATTCAGCAACAAATTTC+AGG | 0.244825 | 4.4:-7872059 | None:intergenic |
| ATTTCCACCTAAATGGCTTC+TGG | 0.245633 | 4.4:-7869190 | None:intergenic |
| CGACTTGCATAAAACTTCTT+TGG | 0.246522 | 4.4:+7870465 | MS.gene49722:CDS |
| CTGAAATTTGTTGCTGAATA+TGG | 0.261458 | 4.4:+7872060 | MS.gene49722:CDS |
| TAGAGTTGAAAGGAATCTTT+TGG | 0.269880 | 4.4:+7870414 | MS.gene49722:CDS |
| GCCCATTTCCTGGAAGGATA+TGG | 0.274340 | 4.4:+7869744 | MS.gene49722:CDS |
| TTAGGTGGAAATTTGAATAA+TGG | 0.274468 | 4.4:+7869201 | MS.gene49722:CDS |
| GTGAGCTTCAAGTGGTTTCT+TGG | 0.276863 | 4.4:+7869265 | MS.gene49722:CDS |
| TCGACTCATTCCATGGAAAA+TGG | 0.279784 | 4.4:+7871419 | MS.gene49722:CDS |
| GGTTTGGACACTTCAATTTC+CGG | 0.285305 | 4.4:+7870568 | MS.gene49722:CDS |
| AACCATATCCTTCCAGGAAA+TGG | 0.286044 | 4.4:-7869746 | None:intergenic |
| CCGCAGATTTGATGGACTTT+TGG | 0.287220 | 4.4:+7870690 | MS.gene49722:CDS |
| TTTATGTGAAACCGACAAAT+TGG | 0.299097 | 4.4:+7870525 | MS.gene49722:CDS |
| CGTATTCCTTGCCCATTTCC+TGG | 0.303078 | 4.4:+7869734 | MS.gene49722:CDS |
| TGCTCTAACCATATCCTTCC+AGG | 0.304191 | 4.4:-7869752 | None:intergenic |
| TTAAGAAGTTTGAGGGAAAA+TGG | 0.304395 | 4.4:+7870150 | MS.gene49722:CDS |
| CCTTACCTCCAAACAAGATT+TGG | 0.309840 | 4.4:-7869384 | None:intergenic |
| ACCGCAAACCAAAGGGTTAC+TGG | 0.312478 | 4.4:+7872214 | MS.gene49722:CDS |
| AAATGATGGTTTGGAATATA+AGG | 0.314737 | 4.4:-7869094 | None:intergenic |
| TGTAAACCCAGAAGCCATTT+AGG | 0.317387 | 4.4:+7869183 | MS.gene49722:CDS |
| TAGGTGGAAATTTGAATAAT+GGG | 0.318321 | 4.4:+7869202 | MS.gene49722:CDS |
| ATTTCATACCAAATCTTGTT+TGG | 0.323525 | 4.4:+7869376 | MS.gene49722:CDS |
| GCCAAGGTTGTTGTCCTGTC+TGG | 0.332172 | 4.4:-7872756 | None:intergenic |
| CCAGTGAGTTAAACAGCAAT+TGG | 0.332368 | 4.4:+7870608 | MS.gene49722:CDS |
| ATCAACTAATTTATCTTATG+AGG | 0.337577 | 4.4:+7870300 | MS.gene49722:CDS |
| GTTCATCTCCGCAGATTTGA+TGG | 0.338069 | 4.4:+7870682 | MS.gene49722:CDS |
| CAATAAAGTCCGCATTCTTC+AGG | 0.340923 | 4.4:+7871074 | MS.gene49722:CDS |
| CTTATTGCACACAAGTTTGA+TGG | 0.342584 | 4.4:-7871823 | None:intergenic |
| TAATCAAAGGTCAAGAGTTC+CGG | 0.348104 | 4.4:+7871999 | MS.gene49722:CDS |
| CCCAGTAACCCTTTGGTTTG+CGG | 0.349921 | 4.4:-7872215 | None:intergenic |
| TTTCCACCTAAATGGCTTCT+GGG | 0.357536 | 4.4:-7869189 | None:intergenic |
| AGCTAGAGAGAGGTTCATTA+TGG | 0.363567 | 4.4:-7872184 | None:intergenic |
| GTGTAAAGGCCTGCTTTATA+TGG | 0.365800 | 4.4:+7871318 | MS.gene49722:CDS |
| TCCTTGCCTTGAGAGATAGA+AGG | 0.366056 | 4.4:-7872724 | None:intergenic |
| TATGCAAGTCGTCTTCTGGC+TGG | 0.376831 | 4.4:-7870453 | None:intergenic |
| GGACAATCTTGAAAATTTGC+AGG | 0.376858 | 4.4:+7872236 | MS.gene49722:CDS |
| CTTTGATATTGCACGGGCGC+TGG | 0.383854 | 4.4:+7872670 | MS.gene49722:CDS |
| GTATTCTGCTCACAAACTTC+AGG | 0.385344 | 4.4:-7871880 | None:intergenic |
| GGAAAATGGTCTGTAAAATC+TGG | 0.393706 | 4.4:+7870164 | MS.gene49722:CDS |
| CGACAAATTGGCACCTGGTC+AGG | 0.397683 | 4.4:+7870537 | MS.gene49722:CDS |
| CAGTGAGTTAAACAGCAATT+GGG | 0.406091 | 4.4:+7870609 | MS.gene49722:CDS |
| TGCCTATGAGGAAGCAGCTT+CGG | 0.407535 | 4.4:+7872097 | MS.gene49722:CDS |
| ATCCTTTCCAAGAAAATAGC+TGG | 0.407564 | 4.4:-7870349 | None:intergenic |
| AAGGAAGAGCGTAGAGAAAG+TGG | 0.411995 | 4.4:-7869075 | None:intergenic |
| ATGCTGATATTAACTCCGTT+TGG | 0.413462 | 4.4:+7869322 | MS.gene49722:CDS |
| GTTCCTTTCTGAAGCTATCA+TGG | 0.414791 | 4.4:+7871513 | MS.gene49722:CDS |
| ATGCAAGTCGTCTTCTGGCT+GGG | 0.415764 | 4.4:-7870452 | None:intergenic |
| AATCAAAGGTCAAGAGTTCC+GGG | 0.421005 | 4.4:+7872000 | MS.gene49722:CDS |
| AAAAGAGTTGGACATAAATT+GGG | 0.422170 | 4.4:+7872886 | MS.gene49722:CDS |
| GAACAACAAATTATATCATC+TGG | 0.426503 | 4.4:+7871910 | MS.gene49722:CDS |
| TCGTTCAAATGACTTTCTAC+TGG | 0.427969 | 4.4:-7872491 | None:intergenic |
| TATCTACATCTGCTGATTCT+CGG | 0.432007 | 4.4:-7872799 | None:intergenic |
| CGAATGTGCTTACAGAATTG+AGG | 0.432541 | 4.4:-7869841 | None:intergenic |
| GATTTCAAAGGGCAATGTAT+TGG | 0.434318 | 4.4:+7869780 | MS.gene49722:CDS |
| GGAGACTTTAAGAAGTTTGA+GGG | 0.435260 | 4.4:+7870143 | MS.gene49722:CDS |
| AAGCTCCTGTTCGTGATGTA+TGG | 0.435936 | 4.4:+7870852 | MS.gene49722:CDS |
| TAAGTAGATTTCAGAGATGC+TGG | 0.441100 | 4.4:+7872446 | MS.gene49722:CDS |
| ACCATATCCTTCCAGGAAAT+GGG | 0.452989 | 4.4:-7869745 | None:intergenic |
| TTTCTACTGGGCATAAATGA+TGG | 0.458102 | 4.4:-7872478 | None:intergenic |
| CTTGGAAAGGATTGTCAGAT+CGG | 0.461197 | 4.4:+7870360 | MS.gene49722:CDS |
| AGATTGTCCCAGTAACCCTT+TGG | 0.463671 | 4.4:-7872222 | None:intergenic |
| CCAATTGCTGTTTAACTCAC+TGG | 0.464061 | 4.4:-7870608 | None:intergenic |
| TGGTCAGGATAAAGAAGGTT+TGG | 0.466478 | 4.4:+7870552 | MS.gene49722:CDS |
| CTGACCAGGTGCCAATTTGT+CGG | 0.477873 | 4.4:-7870536 | None:intergenic |
| TTCTGAAGCTATCATGGAAG+AGG | 0.480831 | 4.4:+7871519 | MS.gene49722:CDS |
| TGGAGACTTTAAGAAGTTTG+AGG | 0.481726 | 4.4:+7870142 | MS.gene49722:CDS |
| TTGCACGGGCGCTGGAAAAG+TGG | 0.485341 | 4.4:+7872678 | MS.gene49722:CDS |
| TGCACGGGCGCTGGAAAAGT+GGG | 0.485874 | 4.4:+7872679 | MS.gene49722:CDS |
| TTGGAGGGAACGGAGAGTTA+AGG | 0.486180 | 4.4:+7869284 | MS.gene49722:CDS |
| AGCCGAAGCTGCTTCCTCAT+AGG | 0.486988 | 4.4:-7872099 | None:intergenic |
| TACAAATACCGCAAACCAAA+GGG | 0.487175 | 4.4:+7872207 | MS.gene49722:CDS |
| GGAAGACGCAGGCAATGAAC+CGG | 0.492642 | 4.4:-7870587 | None:intergenic |
| TAAGAGACTACGTTGAGAAC+CGG | 0.494267 | 4.4:+7871842 | MS.gene49722:CDS |
| CCGCAAACCAAAGGGTTACT+GGG | 0.494866 | 4.4:+7872215 | MS.gene49722:CDS |
| ACATTCCATACATCACGAAC+AGG | 0.495980 | 4.4:-7870857 | None:intergenic |
| TGCAAGTCGTCTTCTGGCTG+GGG | 0.496780 | 4.4:-7870451 | None:intergenic |
| CAGGCCGCTTTGATATTGCA+CGG | 0.501731 | 4.4:+7872663 | MS.gene49722:intron |
| CAAATTATATCATCTGGCTC+TGG | 0.502999 | 4.4:+7871916 | MS.gene49722:CDS |
| TTCCTTGCCCATTTCCTGGA+AGG | 0.505510 | 4.4:+7869738 | MS.gene49722:CDS |
| ATAGCTGGGAAATTGAATCT+TGG | 0.507663 | 4.4:-7870334 | None:intergenic |
| TCATACCAAATCTTGTTTGG+AGG | 0.510529 | 4.4:+7869379 | MS.gene49722:CDS |
| CCTTTCAACTCTATATGCTA+AGG | 0.516881 | 4.4:-7870404 | None:intergenic |
| CGTTCAAATGACTTTCTACT+GGG | 0.520909 | 4.4:-7872490 | None:intergenic |
| AAGTGGTTTCTTGGAGGGAA+CGG | 0.523263 | 4.4:+7869274 | MS.gene49722:CDS |
| AGAAAGTCATTTGAACGAGT+TGG | 0.530001 | 4.4:+7872496 | MS.gene49722:CDS |
| AGGAAGCAGCTTCGGCTGCA+TGG | 0.532690 | 4.4:+7872105 | MS.gene49722:CDS |
| TCAATATCCCTCTGTAGTCC+CGG | 0.534477 | 4.4:-7872018 | None:intergenic |
| AGCTTCAAGTGGTTTCTTGG+AGG | 0.534532 | 4.4:+7869268 | MS.gene49722:CDS |
| GGGTTTACACACTGTTGTTG+AGG | 0.535537 | 4.4:-7869169 | None:intergenic |
| GCTAAGGCTCGTAGATTCAC+AGG | 0.538658 | 4.4:-7870388 | None:intergenic |
| TGAGAAGGCTATAACTCGCA+TGG | 0.539683 | 4.4:+7872140 | MS.gene49722:CDS |
| TTCAAAGCTCATCTAATCAA+AGG | 0.543340 | 4.4:+7871986 | MS.gene49722:CDS |
| AGGAAGAGCGTAGAGAAAGT+GGG | 0.545188 | 4.4:-7869074 | None:intergenic |
| AAACCTTCTTTATCCTGACC+AGG | 0.545502 | 4.4:-7870550 | None:intergenic |
| GCTTCAAGTGGTTTCTTGGA+GGG | 0.545578 | 4.4:+7869269 | MS.gene49722:CDS |
| GCATACAGAACTAAAAGAGT+TGG | 0.545618 | 4.4:+7872874 | MS.gene49722:CDS |
| TTCTCGCCTTCTATCTCTCA+AGG | 0.546788 | 4.4:+7872718 | MS.gene49722:CDS |
| AAGTAGATTTCAGAGATGCT+GGG | 0.547739 | 4.4:+7872447 | MS.gene49722:CDS |
| AGGCCGCTTTGATATTGCAC+GGG | 0.548501 | 4.4:+7872664 | MS.gene49722:intron |
| TTCTACTGGGCATAAATGAT+GGG | 0.548996 | 4.4:-7872477 | None:intergenic |
| ATCAGTTAAAGCATTCCAAA+CGG | 0.551914 | 4.4:-7869337 | None:intergenic |
| AATATGCAGGAAGGGTGTAA+AGG | 0.555160 | 4.4:+7871304 | MS.gene49722:intron |
| GGTGACTTCGACTCATTCCA+TGG | 0.555479 | 4.4:+7871412 | MS.gene49722:CDS |
| ACCAGACAGGACAACAACCT+TGG | 0.555859 | 4.4:+7872755 | MS.gene49722:CDS |
| TCTTGAAAATTTGCAGGACG+AGG | 0.558044 | 4.4:+7872242 | MS.gene49722:CDS |
| AGGAAGGGTTTATGCCTATG+AGG | 0.559853 | 4.4:+7872085 | MS.gene49722:CDS |
| GCACCTGGTCAGGATAAAGA+AGG | 0.563894 | 4.4:+7870547 | MS.gene49722:CDS |
| TAGAGCAAAGAGGATTTCAA+AGG | 0.565114 | 4.4:+7869768 | MS.gene49722:CDS |
| TTGCTGAATATGGTCAGGAA+GGG | 0.565420 | 4.4:+7872070 | MS.gene49722:CDS |
| GTTGCTGAATATGGTCAGGA+AGG | 0.566894 | 4.4:+7872069 | MS.gene49722:CDS |
| ATTTGTTGCTGAATATGGTC+AGG | 0.570102 | 4.4:+7872065 | MS.gene49722:CDS |
| TTTCCCTCGCAATTTGCACA+AGG | 0.570479 | 4.4:+7869134 | MS.gene49722:CDS |
| CTTCCATGATAGCTTCAGAA+AGG | 0.579834 | 4.4:-7871516 | None:intergenic |
| TCCTTTCCAAGAAAATAGCT+GGG | 0.581774 | 4.4:-7870348 | None:intergenic |
| AGAGCAAAGAGGATTTCAAA+GGG | 0.581778 | 4.4:+7869769 | MS.gene49722:CDS |
| CATGAAGCACCATATAAAGC+AGG | 0.584729 | 4.4:-7871327 | None:intergenic |
| GCCTTCTATCTCTCAAGGCA+AGG | 0.588537 | 4.4:+7872723 | MS.gene49722:CDS |
| TTCCCTCGCAATTTGCACAA+GGG | 0.591926 | 4.4:+7869135 | MS.gene49722:CDS |
| TTACAAATACCGCAAACCAA+AGG | 0.593624 | 4.4:+7872206 | MS.gene49722:CDS |
| AAAGTGGGGTGGACTTCATG+AGG | 0.593784 | 4.4:+7872694 | MS.gene49722:CDS |
| TGCCCTTGTGCAAATTGCGA+GGG | 0.594902 | 4.4:-7869137 | None:intergenic |
| TTAGCTCTTGAAGAAGAAGA+AGG | 0.596052 | 4.4:-7869051 | None:intergenic |
| ATCCTTCCAGGAAATGGGCA+AGG | 0.601199 | 4.4:-7869740 | None:intergenic |
| AAATGGACGTTTGAGCAACT+AGG | 0.601868 | 4.4:+7871436 | MS.gene49722:CDS |
| CTACAACACAAGGCTTGTCA+AGG | 0.605033 | 4.4:-7870654 | None:intergenic |
| AGTAGATTTCAGAGATGCTG+GGG | 0.605132 | 4.4:+7872448 | MS.gene49722:CDS |
| GCTTCGGCTGCATGGAAGAG+TGG | 0.605805 | 4.4:+7872113 | MS.gene49722:CDS |
| GAGAAGGCTATAACTCGCAT+GGG | 0.607086 | 4.4:+7872141 | MS.gene49722:CDS |
| AGTGAGTTAAACAGCAATTG+GGG | 0.607282 | 4.4:+7870610 | MS.gene49722:CDS |
| GGTATTTGTAAGCTAGAGAG+AGG | 0.610502 | 4.4:-7872194 | None:intergenic |
| TGTGTGTCTTGAGAAATATA+AGG | 0.610890 | 4.4:-7872845 | None:intergenic |
| CCTTAGCATATAGAGTTGAA+AGG | 0.613436 | 4.4:+7870404 | MS.gene49722:CDS |
| AAGAGTTCCGGGACTACAGA+GGG | 0.615046 | 4.4:+7872011 | MS.gene49722:CDS |
| TGGAAGAGTGGATATTGAGA+AGG | 0.615915 | 4.4:+7872125 | MS.gene49722:CDS |
| AGGATATGGTTAGAGCAAAG+AGG | 0.617625 | 4.4:+7869758 | MS.gene49722:CDS |
| ATGCCCTTGTGCAAATTGCG+AGG | 0.617760 | 4.4:-7869138 | None:intergenic |
| CGGGCGCTGGAAAAGTGGGG+TGG | 0.622705 | 4.4:+7872683 | MS.gene49722:CDS |
| GAAACCGACAAATTGGCACC+TGG | 0.631692 | 4.4:+7870532 | MS.gene49722:CDS |
| GCACGGGCGCTGGAAAAGTG+GGG | 0.634461 | 4.4:+7872680 | MS.gene49722:CDS |
| TTTCATGTGAAGGAAAATGG+AGG | 0.635353 | 4.4:+7870794 | MS.gene49722:intron |
| AAGGCTATAACTCGCATGGG+TGG | 0.635453 | 4.4:+7872144 | MS.gene49722:CDS |
| GGTTAACTGTGAGCTTCAAG+TGG | 0.636625 | 4.4:+7869257 | MS.gene49722:CDS |
| TTTCTCAAGACACACACAAG+TGG | 0.642360 | 4.4:+7872852 | MS.gene49722:CDS |
| CAAGAGTTCCGGGACTACAG+AGG | 0.649469 | 4.4:+7872010 | MS.gene49722:CDS |
| GGTCTGTAAAATCTGGAACA+AGG | 0.653193 | 4.4:+7870171 | MS.gene49722:CDS |
| AGAAGAAGAAGGTGACCGTG+AGG | 0.654804 | 4.4:+7869236 | MS.gene49722:CDS |
| CCAAAAGTCCATCAAATCTG+CGG | 0.656121 | 4.4:-7870690 | None:intergenic |
| TATGGTGCTTCATGCTCGTG+TGG | 0.656840 | 4.4:+7871336 | MS.gene49722:CDS |
| GATTTGGTATGAAATCAGCT+AGG | 0.657566 | 4.4:-7869368 | None:intergenic |
| AAACCCAGAAGCCATTTAGG+TGG | 0.657917 | 4.4:+7869186 | MS.gene49722:CDS |
| ACAGGACAACAACCTTGGCA+AGG | 0.660733 | 4.4:+7872760 | MS.gene49722:CDS |
| TGAACTTCATCTACAACACA+AGG | 0.661750 | 4.4:-7870664 | None:intergenic |
| GAAGCTCACAGTTAACCTCA+CGG | 0.685357 | 4.4:-7869251 | None:intergenic |
| TTTAACTCACTGGAAGACGC+AGG | 0.696438 | 4.4:-7870598 | None:intergenic |
| TGGTCCGTACCTGAAGAATG+CGG | 0.706706 | 4.4:-7871083 | None:intergenic |
| CACACTGCTAAAGTACTCTG+TGG | 0.709210 | 4.4:+7871468 | MS.gene49722:CDS |
| GCGCCCGTGCAATATCAAAG+CGG | 0.728813 | 4.4:-7872667 | None:intergenic |
| GTAGATTTCAGAGATGCTGG+GGG | 0.734657 | 4.4:+7872449 | MS.gene49722:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTACTTTCTTTTTATAAA+AGG | - | chr4.4:7871696-7871715 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAGGAGATA+TGG | - | chr4.4:7871652-7871671 | None:intergenic | 15.0% |
| !! | TAGTTTATTTATATCATTCA+TGG | - | chr4.4:7870236-7870255 | None:intergenic | 15.0% |
| !!! | CACATGAAAATATTTTTTAT+TGG | - | chr4.4:7870783-7870802 | None:intergenic | 15.0% |
| !!! | CTTATTACCATTTTAATTTT+GGG | + | chr4.4:7872612-7872631 | MS.gene49722:intron | 15.0% |
| !!! | TAAAAAATATTTTCATGTGA+AGG | + | chr4.4:7870784-7870803 | MS.gene49722:intron | 15.0% |
| !!! | TCTTATTACCATTTTAATTT+TGG | + | chr4.4:7872611-7872630 | MS.gene49722:intron | 15.0% |
| !! | AAAATATTGAAGTTGAGAAA+GGG | - | chr4.4:7872536-7872555 | None:intergenic | 20.0% |
| !! | ATCAACTAATTTATCTTATG+AGG | + | chr4.4:7870300-7870319 | MS.gene49722:CDS | 20.0% |
| !! | GTTTGTCTATAAATATGATT+TGG | + | chr4.4:7871541-7871560 | MS.gene49722:intron | 20.0% |
| !! | TCTATACTAGATTGTTTATT+AGG | + | chr4.4:7870720-7870739 | MS.gene49722:intron | 20.0% |
| !!! | AAATTCTTTTTTAATGCTTC+AGG | + | chr4.4:7870085-7870104 | MS.gene49722:intron | 20.0% |
| !!! | AAGTAAATAACTGTTTTTGT+TGG | + | chr4.4:7871708-7871727 | MS.gene49722:intron | 20.0% |
| !!! | AATATGTATTTTACTAACAG+TGG | - | chr4.4:7871212-7871231 | None:intergenic | 20.0% |
| !!! | ATACAAGTTCAAACTTTTAT+CGG | - | chr4.4:7871256-7871275 | None:intergenic | 20.0% |
| !!! | ATTTTGTAGTATTAGAAAGT+TGG | - | chr4.4:7870069-7870088 | None:intergenic | 20.0% |
| !!! | GTATTAACTTTAAGAAACAT+AGG | - | chr4.4:7870202-7870221 | None:intergenic | 20.0% |
| !!! | TCTTTTTATAAAAGGAGATA+TGG | - | chr4.4:7871688-7871707 | None:intergenic | 20.0% |
| ! | AAAACTTCTTTGGTTGTTAA+TGG | + | chr4.4:7870475-7870494 | MS.gene49722:CDS | 25.0% |
| ! | AAAAGAGTTGGACATAAATT+GGG | + | chr4.4:7872886-7872905 | MS.gene49722:CDS | 25.0% |
| ! | AAGCTATGGTTAATCAATTA+TGG | - | chr4.4:7869414-7869433 | None:intergenic | 25.0% |
| ! | AATCTTATCATATGACTCTT+TGG | - | chr4.4:7869656-7869675 | None:intergenic | 25.0% |
| ! | AGACTCAAAGATAAAAATGA+TGG | - | chr4.4:7869111-7869130 | None:intergenic | 25.0% |
| ! | ATTAAATCAATATGCAGGAA+GGG | + | chr4.4:7871296-7871315 | MS.gene49722:intron | 25.0% |
| ! | ATTTCATACCAAATCTTGTT+TGG | + | chr4.4:7869376-7869395 | MS.gene49722:CDS | 25.0% |
| ! | CAAAATATTGAAGTTGAGAA+AGG | - | chr4.4:7872537-7872556 | None:intergenic | 25.0% |
| ! | CAAAGATAAAAATGATGGTT+TGG | - | chr4.4:7869106-7869125 | None:intergenic | 25.0% |
| ! | GAACAACAAATTATATCATC+TGG | + | chr4.4:7871910-7871929 | MS.gene49722:CDS | 25.0% |
| ! | GTTGCCTTAATTCTTAAAAT+GGG | + | chr4.4:7870742-7870761 | MS.gene49722:intron | 25.0% |
| ! | TAAAAGAGTTGGACATAAAT+TGG | + | chr4.4:7872885-7872904 | MS.gene49722:CDS | 25.0% |
| ! | TAAATCGATCCACATTTAAA+TGG | + | chr4.4:7871754-7871773 | MS.gene49722:intron | 25.0% |
| ! | TAACCATAGCTTCATTATAA+GGG | + | chr4.4:7869422-7869441 | MS.gene49722:intron | 25.0% |
| ! | TAGGTGGAAATTTGAATAAT+GGG | + | chr4.4:7869202-7869221 | MS.gene49722:CDS | 25.0% |
| ! | TATTCAAATTTCCACCTAAA+TGG | - | chr4.4:7869200-7869219 | None:intergenic | 25.0% |
| ! | TCAAGTGTTTATCATATAAG+TGG | - | chr4.4:7869567-7869586 | None:intergenic | 25.0% |
| ! | TCAATATCTCTAGTGTAAAA+AGG | - | chr4.4:7870927-7870946 | None:intergenic | 25.0% |
| ! | TCTTCTGTCAAAAAGATAAA+TGG | + | chr4.4:7870499-7870518 | MS.gene49722:CDS | 25.0% |
| ! | TCTTGATTAAATCAATATGC+AGG | + | chr4.4:7871291-7871310 | MS.gene49722:intron | 25.0% |
| ! | TTAAAAACTGTATGAACAGA+GGG | + | chr4.4:7870003-7870022 | MS.gene49722:intron | 25.0% |
| ! | TTAACCATAGCTTCATTATA+AGG | + | chr4.4:7869421-7869440 | MS.gene49722:intron | 25.0% |
| ! | TTAGGTGGAAATTTGAATAA+TGG | + | chr4.4:7869201-7869220 | MS.gene49722:CDS | 25.0% |
| ! | TTTAAAAACTGTATGAACAG+AGG | + | chr4.4:7870002-7870021 | MS.gene49722:intron | 25.0% |
| !! | AAATGATGGTTTGGAATATA+AGG | - | chr4.4:7869097-7869116 | None:intergenic | 25.0% |
| !! | ACCATTTTCATAAGTTGTTT+TGG | - | chr4.4:7869511-7869530 | None:intergenic | 25.0% |
| !! | ATCTTACTGATTGCTAAATT+TGG | - | chr4.4:7871039-7871058 | None:intergenic | 25.0% |
| !! | TATTGGATACAATCTTTTGA+GGG | + | chr4.4:7871731-7871750 | MS.gene49722:intron | 25.0% |
| !! | TATTTTCATGTGAAGGAAAA+TGG | + | chr4.4:7870791-7870810 | MS.gene49722:intron | 25.0% |
| !! | TGTTATAAGTTCTTTGTTTC+AGG | + | chr4.4:7871783-7871802 | MS.gene49722:intron | 25.0% |
| !! | TTAAGTTGCTTATACAAACA+TGG | + | chr4.4:7869587-7869606 | MS.gene49722:intron | 25.0% |
| !!! | ACAAATGTTTTTTTGCCAAT+TGG | - | chr4.4:7871004-7871023 | None:intergenic | 25.0% |
| !!! | ACATCCCATTTTAAGAATTA+AGG | - | chr4.4:7870749-7870768 | None:intergenic | 25.0% |
| !!! | AGAGTTGTTTTTGTTTTTAG+TGG | + | chr4.4:7869710-7869729 | MS.gene49722:intron | 25.0% |
| !!! | ATAACTGTTTTTGTTGGTAT+TGG | + | chr4.4:7871714-7871733 | MS.gene49722:intron | 25.0% |
| !!! | GAGTTGTTTTTGTTTTTAGT+GGG | + | chr4.4:7869711-7869730 | MS.gene49722:intron | 25.0% |
| !!! | TTAACTTTAGCTTGTTATTC+TGG | - | chr4.4:7872306-7872325 | None:intergenic | 25.0% |
| !!! | TTTTTTAATGCTTCAGGAAT+GGG | + | chr4.4:7870091-7870110 | MS.gene49722:intron | 25.0% |
| AATAAGATACATATGCCATG+TGG | - | chr4.4:7872598-7872617 | None:intergenic | 30.0% | |
| AATTGACAATGACATGATGA+AGG | + | chr4.4:7872324-7872343 | MS.gene49722:intron | 30.0% | |
| ACATTTCAGCCATTTAAATG+TGG | - | chr4.4:7871766-7871785 | None:intergenic | 30.0% | |
| CATATTCAGCAACAAATTTC+AGG | - | chr4.4:7872062-7872081 | None:intergenic | 30.0% | |
| CTATACGAAATCAAAGTCAT+TGG | + | chr4.4:7869617-7869636 | MS.gene49722:intron | 30.0% | |
| GATTAAATCAATATGCAGGA+AGG | + | chr4.4:7871295-7871314 | MS.gene49722:intron | 30.0% | |
| GCCAAAACAACTTATGAAAA+TGG | + | chr4.4:7869507-7869526 | MS.gene49722:intron | 30.0% | |
| GGTTGCCTTAATTCTTAAAA+TGG | + | chr4.4:7870741-7870760 | MS.gene49722:intron | 30.0% | |
| TCTACTAGCATAAACTCTTT+AGG | + | chr4.4:7869477-7869496 | MS.gene49722:intron | 30.0% | |
| TGCTAAGCCCAAAATTAAAA+TGG | - | chr4.4:7872622-7872641 | None:intergenic | 30.0% | |
| TGTCTTGCTTCAACTTATAT+GGG | - | chr4.4:7871622-7871641 | None:intergenic | 30.0% | |
| TGTGTGTCTTGAGAAATATA+AGG | - | chr4.4:7872848-7872867 | None:intergenic | 30.0% | |
| TTAAGAAGTTTGAGGGAAAA+TGG | + | chr4.4:7870150-7870169 | MS.gene49722:CDS | 30.0% | |
| TTCAAAGCTCATCTAATCAA+AGG | + | chr4.4:7871986-7872005 | MS.gene49722:CDS | 30.0% | |
| TTTATGTGAAACCGACAAAT+TGG | + | chr4.4:7870525-7870544 | MS.gene49722:CDS | 30.0% | |
| ! | AGAGTTGAAAGGAATCTTTT+GGG | + | chr4.4:7870415-7870434 | MS.gene49722:CDS | 30.0% |
| ! | ATCAGTTAAAGCATTCCAAA+CGG | - | chr4.4:7869340-7869359 | None:intergenic | 30.0% |
| ! | ATTTCAGGAGTTCAGATTTT+AGG | - | chr4.4:7872047-7872066 | None:intergenic | 30.0% |
| ! | CTTTGATTTCGTATAGAACT+TGG | - | chr4.4:7869613-7869632 | None:intergenic | 30.0% |
| ! | GTATTGGATACAATCTTTTG+AGG | + | chr4.4:7871730-7871749 | MS.gene49722:intron | 30.0% |
| ! | TAGAGTTGAAAGGAATCTTT+TGG | + | chr4.4:7870414-7870433 | MS.gene49722:CDS | 30.0% |
| ! | TTGTTTTCACTCGAAATGTT+TGG | + | chr4.4:7871596-7871615 | MS.gene49722:intron | 30.0% |
| !! | AGATAATGGAATTAACTTGC+AGG | + | chr4.4:7872644-7872663 | MS.gene49722:intron | 30.0% |
| !! | CTGAAATTTGTTGCTGAATA+TGG | + | chr4.4:7872060-7872079 | MS.gene49722:CDS | 30.0% |
| !! | CTTCATTTTTCAATGGTTGA+TGG | + | chr4.4:7870122-7870141 | MS.gene49722:CDS | 30.0% |
| !! | TCGAGAACTTCATTTTTCAA+TGG | + | chr4.4:7870115-7870134 | MS.gene49722:CDS | 30.0% |
| !! | TTACTAACAGTGGATTTTGA+TGG | - | chr4.4:7871202-7871221 | None:intergenic | 30.0% |
| !!! | CTTTTTTAATGCTTCAGGAA+TGG | + | chr4.4:7870090-7870109 | MS.gene49722:intron | 30.0% |
| AACAGCAATTGGGGTATATT+TGG | + | chr4.4:7870619-7870638 | MS.gene49722:CDS | 35.0% | |
| AAGTAGATTTCAGAGATGCT+GGG | + | chr4.4:7872447-7872466 | MS.gene49722:CDS | 35.0% | |
| AAGTGGATATCATTGAAGAG+TGG | + | chr4.4:7869937-7869956 | MS.gene49722:intron | 35.0% | |
| ACATGTGTAACATCGTTTAC+AGG | + | chr4.4:7872389-7872408 | MS.gene49722:intron | 35.0% | |
| AGAAAGTCATTTGAACGAGT+TGG | + | chr4.4:7872496-7872515 | MS.gene49722:CDS | 35.0% | |
| AGAGCAAAGAGGATTTCAAA+GGG | + | chr4.4:7869769-7869788 | MS.gene49722:CDS | 35.0% | |
| AGATTCTCTTGTTCTAACTC+TGG | - | chr4.4:7871122-7871141 | None:intergenic | 35.0% | |
| AGTGAGTTAAACAGCAATTG+GGG | + | chr4.4:7870610-7870629 | MS.gene49722:CDS | 35.0% | |
| ATAGCTGGGAAATTGAATCT+TGG | - | chr4.4:7870337-7870356 | None:intergenic | 35.0% | |
| ATCCTTTCCAAGAAAATAGC+TGG | - | chr4.4:7870352-7870371 | None:intergenic | 35.0% | |
| ATGCCCTTATAATGAAGCTA+TGG | - | chr4.4:7869428-7869447 | None:intergenic | 35.0% | |
| ATGCTGATATTAACTCCGTT+TGG | + | chr4.4:7869322-7869341 | MS.gene49722:CDS | 35.0% | |
| CAGTGAGTTAAACAGCAATT+GGG | + | chr4.4:7870609-7870628 | MS.gene49722:CDS | 35.0% | |
| CCTTAGCATATAGAGTTGAA+AGG | + | chr4.4:7870404-7870423 | MS.gene49722:CDS | 35.0% | |
| CCTTTCAACTCTATATGCTA+AGG | - | chr4.4:7870407-7870426 | None:intergenic | 35.0% | |
| CGACTTGCATAAAACTTCTT+TGG | + | chr4.4:7870465-7870484 | MS.gene49722:CDS | 35.0% | |
| CGTTCAAATGACTTTCTACT+GGG | - | chr4.4:7872493-7872512 | None:intergenic | 35.0% | |
| CTAGAAGAAGAAGAAGAAGA+AGG | + | chr4.4:7869225-7869244 | MS.gene49722:CDS | 35.0% | |
| CTTATTGCACACAAGTTTGA+TGG | - | chr4.4:7871826-7871845 | None:intergenic | 35.0% | |
| GATTTCAAAGGGCAATGTAT+TGG | + | chr4.4:7869780-7869799 | MS.gene49722:CDS | 35.0% | |
| GCATACAGAACTAAAAGAGT+TGG | + | chr4.4:7872874-7872893 | MS.gene49722:CDS | 35.0% | |
| GCATGCTGTAAAAGATTTCT+AGG | + | chr4.4:7870950-7870969 | MS.gene49722:intron | 35.0% | |
| GGAAAATGGTCTGTAAAATC+TGG | + | chr4.4:7870164-7870183 | MS.gene49722:CDS | 35.0% | |
| GGACAATCTTGAAAATTTGC+AGG | + | chr4.4:7872236-7872255 | MS.gene49722:CDS | 35.0% | |
| GTGTCTTGCTTCAACTTATA+TGG | - | chr4.4:7871623-7871642 | None:intergenic | 35.0% | |
| TAAGTAGATTTCAGAGATGC+TGG | + | chr4.4:7872446-7872465 | MS.gene49722:CDS | 35.0% | |
| TAATCAAAGGTCAAGAGTTC+CGG | + | chr4.4:7871999-7872018 | MS.gene49722:CDS | 35.0% | |
| TACAAATACCGCAAACCAAA+GGG | + | chr4.4:7872207-7872226 | MS.gene49722:CDS | 35.0% | |
| TAGAGCAAAGAGGATTTCAA+AGG | + | chr4.4:7869768-7869787 | MS.gene49722:CDS | 35.0% | |
| TCCTTTCCAAGAAAATAGCT+GGG | - | chr4.4:7870351-7870370 | None:intergenic | 35.0% | |
| TCGTTCAAATGACTTTCTAC+TGG | - | chr4.4:7872494-7872513 | None:intergenic | 35.0% | |
| TGAACTTCATCTACAACACA+AGG | - | chr4.4:7870667-7870686 | None:intergenic | 35.0% | |
| TGGCAAGTAGCAACTAAAAA+TGG | - | chr4.4:7872286-7872305 | None:intergenic | 35.0% | |
| TTACAAATACCGCAAACCAA+AGG | + | chr4.4:7872206-7872225 | MS.gene49722:CDS | 35.0% | |
| TTCTACTGGGCATAAATGAT+GGG | - | chr4.4:7872480-7872499 | None:intergenic | 35.0% | |
| TTTCATGTGAAGGAAAATGG+AGG | + | chr4.4:7870794-7870813 | MS.gene49722:intron | 35.0% | |
| TTTCTACTGGGCATAAATGA+TGG | - | chr4.4:7872481-7872500 | None:intergenic | 35.0% | |
| ! | ATTTGTTGCTGAATATGGTC+AGG | + | chr4.4:7872065-7872084 | MS.gene49722:CDS | 35.0% |
| ! | CAAATTATATCATCTGGCTC+TGG | + | chr4.4:7871916-7871935 | MS.gene49722:CDS | 35.0% |
| ! | CATTTTTCTTATCCTTGCCA+AGG | - | chr4.4:7872775-7872794 | None:intergenic | 35.0% |
| ! | CTTCATTATAAGGGCATGTT+TGG | + | chr4.4:7869431-7869450 | MS.gene49722:intron | 35.0% |
| ! | GAGTTGAAAGGAATCTTTTG+GGG | + | chr4.4:7870416-7870435 | MS.gene49722:CDS | 35.0% |
| ! | GATTTGGTATGAAATCAGCT+AGG | - | chr4.4:7869371-7869390 | None:intergenic | 35.0% |
| ! | GGAGACTTTAAGAAGTTTGA+GGG | + | chr4.4:7870143-7870162 | MS.gene49722:CDS | 35.0% |
| ! | GGCAAAAAAACATTTGTTGC+AGG | + | chr4.4:7871007-7871026 | MS.gene49722:intron | 35.0% |
| ! | TCATACCAAATCTTGTTTGG+AGG | + | chr4.4:7869379-7869398 | MS.gene49722:CDS | 35.0% |
| ! | TGGAGACTTTAAGAAGTTTG+AGG | + | chr4.4:7870142-7870161 | MS.gene49722:CDS | 35.0% |
| ! | TTAGCTCTTGAAGAAGAAGA+AGG | - | chr4.4:7869054-7869073 | None:intergenic | 35.0% |
| ! | TTATAAGGGCATGTTTGGAT+TGG | + | chr4.4:7869436-7869455 | MS.gene49722:intron | 35.0% |
| ! | TTTTATCGGCAATTGTGCTT+AGG | - | chr4.4:7871242-7871261 | None:intergenic | 35.0% |
| ! | TTTTCTGACTCAACTCCAAT+TGG | + | chr4.4:7870986-7871005 | MS.gene49722:intron | 35.0% |
| !! | ACTCTGGTTCATTTTCAGAT+TGG | - | chr4.4:7871106-7871125 | None:intergenic | 35.0% |
| !! | CAATTTCCCAGCTATTTTCT+TGG | + | chr4.4:7870342-7870361 | MS.gene49722:CDS | 35.0% |
| !! | TATCTACATCTGCTGATTCT+CGG | - | chr4.4:7872802-7872821 | None:intergenic | 35.0% |
| !!! | ACAAGAGATCAGTTTTGAAC+AGG | + | chr4.4:7871384-7871403 | MS.gene49722:CDS | 35.0% |
| AAACCTTCTTTATCCTGACC+AGG | - | chr4.4:7870553-7870572 | None:intergenic | 40.0% | |
| AAATGGACGTTTGAGCAACT+AGG | + | chr4.4:7871436-7871455 | MS.gene49722:CDS | 40.0% | |
| AACCATATCCTTCCAGGAAA+TGG | - | chr4.4:7869749-7869768 | None:intergenic | 40.0% | |
| AAGGAGAAAAAGAACCAGAC+AGG | + | chr4.4:7872742-7872761 | MS.gene49722:CDS | 40.0% | |
| AATCAAAGGTCAAGAGTTCC+GGG | + | chr4.4:7872000-7872019 | MS.gene49722:CDS | 40.0% | |
| ACATTCCATACATCACGAAC+AGG | - | chr4.4:7870860-7870879 | None:intergenic | 40.0% | |
| ACCATATCCTTCCAGGAAAT+GGG | - | chr4.4:7869748-7869767 | None:intergenic | 40.0% | |
| AGCTAGAGAGAGGTTCATTA+TGG | - | chr4.4:7872187-7872206 | None:intergenic | 40.0% | |
| AGGATATGGTTAGAGCAAAG+AGG | + | chr4.4:7869758-7869777 | MS.gene49722:CDS | 40.0% | |
| AGTAGATTTCAGAGATGCTG+GGG | + | chr4.4:7872448-7872467 | MS.gene49722:CDS | 40.0% | |
| ATTTCCACCTAAATGGCTTC+TGG | - | chr4.4:7869193-7869212 | None:intergenic | 40.0% | |
| CAATAAAGTCCGCATTCTTC+AGG | + | chr4.4:7871074-7871093 | MS.gene49722:CDS | 40.0% | |
| CAGGAAATTGTGATGCTTTC+CGG | - | chr4.4:7871864-7871883 | None:intergenic | 40.0% | |
| CCAAAAGTCCATCAAATCTG+CGG | - | chr4.4:7870693-7870712 | None:intergenic | 40.0% | |
| CCAGTGAGTTAAACAGCAAT+TGG | + | chr4.4:7870608-7870627 | MS.gene49722:CDS | 40.0% | |
| CCTGCAAAAAGCAGAATTGA+AGG | - | chr4.4:7870275-7870294 | None:intergenic | 40.0% | |
| CCTTACCTCCAAACAAGATT+TGG | - | chr4.4:7869387-7869406 | None:intergenic | 40.0% | |
| CGAATGTGCTTACAGAATTG+AGG | - | chr4.4:7869844-7869863 | None:intergenic | 40.0% | |
| CTTCCATGATAGCTTCAGAA+AGG | - | chr4.4:7871519-7871538 | None:intergenic | 40.0% | |
| CTTGGAAAGGATTGTCAGAT+CGG | + | chr4.4:7870360-7870379 | MS.gene49722:CDS | 40.0% | |
| GAAACACGCATTACTTACTC+AGG | - | chr4.4:7870905-7870924 | None:intergenic | 40.0% | |
| GACAATGACATGATGAAGGA+TGG | + | chr4.4:7872328-7872347 | MS.gene49722:intron | 40.0% | |
| GGTATTTGTAAGCTAGAGAG+AGG | - | chr4.4:7872197-7872216 | None:intergenic | 40.0% | |
| GGTTTGGACACTTCAATTTC+CGG | + | chr4.4:7870568-7870587 | MS.gene49722:CDS | 40.0% | |
| GTATTCTGCTCACAAACTTC+AGG | - | chr4.4:7871883-7871902 | None:intergenic | 40.0% | |
| GTGTAAAGGCCTGCTTTATA+TGG | + | chr4.4:7871318-7871337 | MS.gene49722:CDS | 40.0% | |
| GTTTGCGTTGCTTACTTTCA+AGG | + | chr4.4:7872556-7872575 | MS.gene49722:intron | 40.0% | |
| TAAGAGACTACGTTGAGAAC+CGG | + | chr4.4:7871842-7871861 | MS.gene49722:CDS | 40.0% | |
| TATCGATGTAACATGCCACA+TGG | + | chr4.4:7872580-7872599 | MS.gene49722:intron | 40.0% | |
| TCGACTCATTCCATGGAAAA+TGG | + | chr4.4:7871419-7871438 | MS.gene49722:CDS | 40.0% | |
| TCTTGAAAATTTGCAGGACG+AGG | + | chr4.4:7872242-7872261 | MS.gene49722:CDS | 40.0% | |
| TGCTAGCAAGCATAATACAG+TGG | - | chr4.4:7871170-7871189 | None:intergenic | 40.0% | |
| TGGAAGAGTGGATATTGAGA+AGG | + | chr4.4:7872125-7872144 | MS.gene49722:CDS | 40.0% | |
| TGGTCAGGATAAAGAAGGTT+TGG | + | chr4.4:7870552-7870571 | MS.gene49722:CDS | 40.0% | |
| TGTAAACCCAGAAGCCATTT+AGG | + | chr4.4:7869183-7869202 | MS.gene49722:CDS | 40.0% | |
| TTCTATGTGTGACTGAGAAG+TGG | + | chr4.4:7869920-7869939 | MS.gene49722:intron | 40.0% | |
| TTGCTGAATATGGTCAGGAA+GGG | + | chr4.4:7872070-7872089 | MS.gene49722:CDS | 40.0% | |
| TTGGGCTTAGCAGTAGATAA+TGG | + | chr4.4:7872630-7872649 | MS.gene49722:intron | 40.0% | |
| TTTCCACCTAAATGGCTTCT+GGG | - | chr4.4:7869192-7869211 | None:intergenic | 40.0% | |
| TTTCTCAAGACACACACAAG+TGG | + | chr4.4:7872852-7872871 | MS.gene49722:CDS | 40.0% | |
| ! | AATATGCAGGAAGGGTGTAA+AGG | + | chr4.4:7871304-7871323 | MS.gene49722:intron | 40.0% |
| ! | CATGAAGCACCATATAAAGC+AGG | - | chr4.4:7871330-7871349 | None:intergenic | 40.0% |
| ! | CCAAATCTTGTTTGGAGGTA+AGG | + | chr4.4:7869384-7869403 | MS.gene49722:intron | 40.0% |
| ! | GGTCTGTAAAATCTGGAACA+AGG | + | chr4.4:7870171-7870190 | MS.gene49722:CDS | 40.0% |
| ! | GTTTTATGCAAGTCGTCTTC+TGG | - | chr4.4:7870460-7870479 | None:intergenic | 40.0% |
| !! | AGTCATTTGAACGAGTTGGT+AGG | + | chr4.4:7872500-7872519 | MS.gene49722:intron | 40.0% |
| !! | CCAATTGCTGTTTAACTCAC+TGG | - | chr4.4:7870611-7870630 | None:intergenic | 40.0% |
| !! | GTTCCTTTCTGAAGCTATCA+TGG | + | chr4.4:7871513-7871532 | MS.gene49722:CDS | 40.0% |
| !! | TCCCAGCTATTTTCTTGGAA+AGG | + | chr4.4:7870347-7870366 | MS.gene49722:CDS | 40.0% |
| !! | TTCTGAAGCTATCATGGAAG+AGG | + | chr4.4:7871519-7871538 | MS.gene49722:CDS | 40.0% |
| !!! | ATCAGTTTTGAACAGGCTGA+AGG | + | chr4.4:7871391-7871410 | MS.gene49722:CDS | 40.0% |
| !!! | CATTGAAGCTCGTGTTGTTT+TGG | + | chr4.4:7869805-7869824 | MS.gene49722:CDS | 40.0% |
| !!! | CCTTCAATTCTGCTTTTTGC+AGG | + | chr4.4:7870272-7870291 | MS.gene49722:intron | 40.0% |
| AAACCCAGAAGCCATTTAGG+TGG | + | chr4.4:7869186-7869205 | MS.gene49722:CDS | 45.0% | |
| AAGCTCCTGTTCGTGATGTA+TGG | + | chr4.4:7870852-7870871 | MS.gene49722:CDS | 45.0% | |
| AAGTCCGCATTCTTCAGGTA+CGG | + | chr4.4:7871079-7871098 | MS.gene49722:intron | 45.0% | |
| AAGTGGTTTCTTGGAGGGAA+CGG | + | chr4.4:7869274-7869293 | MS.gene49722:CDS | 45.0% | |
| AGATTGTCCCAGTAACCCTT+TGG | - | chr4.4:7872225-7872244 | None:intergenic | 45.0% | |
| AGCAAGCATAATACAGTGGC+AGG | - | chr4.4:7871166-7871185 | None:intergenic | 45.0% | |
| AGCTTCAAGTGGTTTCTTGG+AGG | + | chr4.4:7869268-7869287 | MS.gene49722:CDS | 45.0% | |
| AGGAAGGGTTTATGCCTATG+AGG | + | chr4.4:7872085-7872104 | MS.gene49722:CDS | 45.0% | |
| CTACAACACAAGGCTTGTCA+AGG | - | chr4.4:7870657-7870676 | None:intergenic | 45.0% | |
| GAAGCTCACAGTTAACCTCA+CGG | - | chr4.4:7869254-7869273 | None:intergenic | 45.0% | |
| GAGAAGGCTATAACTCGCAT+GGG | + | chr4.4:7872141-7872160 | MS.gene49722:CDS | 45.0% | |
| GCTTCAAGTGGTTTCTTGGA+GGG | + | chr4.4:7869269-7869288 | MS.gene49722:CDS | 45.0% | |
| GGGTTTACACACTGTTGTTG+AGG | - | chr4.4:7869172-7869191 | None:intergenic | 45.0% | |
| GGTTAACTGTGAGCTTCAAG+TGG | + | chr4.4:7869257-7869276 | MS.gene49722:CDS | 45.0% | |
| GTAGATTTCAGAGATGCTGG+GGG | + | chr4.4:7872449-7872468 | MS.gene49722:CDS | 45.0% | |
| GTGAGCTTCAAGTGGTTTCT+TGG | + | chr4.4:7869265-7869284 | MS.gene49722:CDS | 45.0% | |
| GTTCATCTCCGCAGATTTGA+TGG | + | chr4.4:7870682-7870701 | MS.gene49722:CDS | 45.0% | |
| GTTGCTGAATATGGTCAGGA+AGG | + | chr4.4:7872069-7872088 | MS.gene49722:CDS | 45.0% | |
| TCAATATCCCTCTGTAGTCC+CGG | - | chr4.4:7872021-7872040 | None:intergenic | 45.0% | |
| TCCTTGCCTTGAGAGATAGA+AGG | - | chr4.4:7872727-7872746 | None:intergenic | 45.0% | |
| TGAGAAGGCTATAACTCGCA+TGG | + | chr4.4:7872140-7872159 | MS.gene49722:CDS | 45.0% | |
| TGCTCTAACCATATCCTTCC+AGG | - | chr4.4:7869755-7869774 | None:intergenic | 45.0% | |
| TTCCCTCGCAATTTGCACAA+GGG | + | chr4.4:7869135-7869154 | MS.gene49722:CDS | 45.0% | |
| TTCTCGCCTTCTATCTCTCA+AGG | + | chr4.4:7872718-7872737 | MS.gene49722:CDS | 45.0% | |
| TTTAACTCACTGGAAGACGC+AGG | - | chr4.4:7870601-7870620 | None:intergenic | 45.0% | |
| TTTCCCTCGCAATTTGCACA+AGG | + | chr4.4:7869134-7869153 | MS.gene49722:CDS | 45.0% | |
| ! | AAGGAAGAGCGTAGAGAAAG+TGG | - | chr4.4:7869078-7869097 | None:intergenic | 45.0% |
| ! | AGGAAGAGCGTAGAGAAAGT+GGG | - | chr4.4:7869077-7869096 | None:intergenic | 45.0% |
| ! | CACACTGCTAAAGTACTCTG+TGG | + | chr4.4:7871468-7871487 | MS.gene49722:CDS | 45.0% |
| ! | GCTCAAACGTCCATTTTCCA+TGG | - | chr4.4:7871432-7871451 | None:intergenic | 45.0% |
| !!! | CCGCAGATTTGATGGACTTT+TGG | + | chr4.4:7870690-7870709 | MS.gene49722:CDS | 45.0% |
| !!! | TTTTTCAAAAAAAAAAAAAA+AGG | - | chr4.4:7871660-7871679 | None:intergenic | 5.0% |
| AAGAGTTCCGGGACTACAGA+GGG | + | chr4.4:7872011-7872030 | MS.gene49722:CDS | 50.0% | |
| AAGGCTATAACTCGCATGGG+TGG | + | chr4.4:7872144-7872163 | MS.gene49722:CDS | 50.0% | |
| ACAGGACAACAACCTTGGCA+AGG | + | chr4.4:7872760-7872779 | MS.gene49722:CDS | 50.0% | |
| ACCAGACAGGACAACAACCT+TGG | + | chr4.4:7872755-7872774 | MS.gene49722:CDS | 50.0% | |
| ACCGCAAACCAAAGGGTTAC+TGG | + | chr4.4:7872214-7872233 | MS.gene49722:CDS | 50.0% | |
| AGAAGAAGAAGGTGACCGTG+AGG | + | chr4.4:7869236-7869255 | MS.gene49722:CDS | 50.0% | |
| ATCCTTCCAGGAAATGGGCA+AGG | - | chr4.4:7869743-7869762 | None:intergenic | 50.0% | |
| ATGCCCTTGTGCAAATTGCG+AGG | - | chr4.4:7869141-7869160 | None:intergenic | 50.0% | |
| ATTTCAGAGATGCTGGGGGA+TGG | + | chr4.4:7872453-7872472 | MS.gene49722:CDS | 50.0% | |
| CCGCAAACCAAAGGGTTACT+GGG | + | chr4.4:7872215-7872234 | MS.gene49722:CDS | 50.0% | |
| CGTATTCCTTGCCCATTTCC+TGG | + | chr4.4:7869734-7869753 | MS.gene49722:CDS | 50.0% | |
| CTGACCAGGTGCCAATTTGT+CGG | - | chr4.4:7870539-7870558 | None:intergenic | 50.0% | |
| GAAACCGACAAATTGGCACC+TGG | + | chr4.4:7870532-7870551 | MS.gene49722:CDS | 50.0% | |
| GCACCTGGTCAGGATAAAGA+AGG | + | chr4.4:7870547-7870566 | MS.gene49722:CDS | 50.0% | |
| GCCCATTTCCTGGAAGGATA+TGG | + | chr4.4:7869744-7869763 | MS.gene49722:CDS | 50.0% | |
| GCCTTCTATCTCTCAAGGCA+AGG | + | chr4.4:7872723-7872742 | MS.gene49722:CDS | 50.0% | |
| GCTAAGGCTCGTAGATTCAC+AGG | - | chr4.4:7870391-7870410 | None:intergenic | 50.0% | |
| GGTGACTTCGACTCATTCCA+TGG | + | chr4.4:7871412-7871431 | MS.gene49722:CDS | 50.0% | |
| TATGCAAGTCGTCTTCTGGC+TGG | - | chr4.4:7870456-7870475 | None:intergenic | 50.0% | |
| TATGGTGCTTCATGCTCGTG+TGG | + | chr4.4:7871336-7871355 | MS.gene49722:CDS | 50.0% | |
| TGCCCTTGTGCAAATTGCGA+GGG | - | chr4.4:7869140-7869159 | None:intergenic | 50.0% | |
| TGCCTATGAGGAAGCAGCTT+CGG | + | chr4.4:7872097-7872116 | MS.gene49722:CDS | 50.0% | |
| TGGTCCGTACCTGAAGAATG+CGG | - | chr4.4:7871086-7871105 | None:intergenic | 50.0% | |
| TTCCTTGCCCATTTCCTGGA+AGG | + | chr4.4:7869738-7869757 | MS.gene49722:CDS | 50.0% | |
| TTGGAGGGAACGGAGAGTTA+AGG | + | chr4.4:7869284-7869303 | MS.gene49722:CDS | 50.0% | |
| ! | AAAGTGGGGTGGACTTCATG+AGG | + | chr4.4:7872694-7872713 | MS.gene49722:CDS | 50.0% |
| ! | AGGCCGCTTTGATATTGCAC+GGG | + | chr4.4:7872664-7872683 | MS.gene49722:intron | 50.0% |
| ! | ATGCAAGTCGTCTTCTGGCT+GGG | - | chr4.4:7870455-7870474 | None:intergenic | 50.0% |
| ! | CAGGCCGCTTTGATATTGCA+CGG | + | chr4.4:7872663-7872682 | MS.gene49722:intron | 50.0% |
| !! | CCCAGTAACCCTTTGGTTTG+CGG | - | chr4.4:7872218-7872237 | None:intergenic | 50.0% |
| AGCCGAAGCTGCTTCCTCAT+AGG | - | chr4.4:7872102-7872121 | None:intergenic | 55.0% | |
| CAAGAGTTCCGGGACTACAG+AGG | + | chr4.4:7872010-7872029 | MS.gene49722:CDS | 55.0% | |
| CGACAAATTGGCACCTGGTC+AGG | + | chr4.4:7870537-7870556 | MS.gene49722:CDS | 55.0% | |
| CTTTGATATTGCACGGGCGC+TGG | + | chr4.4:7872670-7872689 | MS.gene49722:CDS | 55.0% | |
| GCCAAGGTTGTTGTCCTGTC+TGG | - | chr4.4:7872759-7872778 | None:intergenic | 55.0% | |
| GCGCCCGTGCAATATCAAAG+CGG | - | chr4.4:7872670-7872689 | None:intergenic | 55.0% | |
| GGAAGACGCAGGCAATGAAC+CGG | - | chr4.4:7870590-7870609 | None:intergenic | 55.0% | |
| ! | TGCAAGTCGTCTTCTGGCTG+GGG | - | chr4.4:7870454-7870473 | None:intergenic | 55.0% |
| AGGAAGCAGCTTCGGCTGCA+TGG | + | chr4.4:7872105-7872124 | MS.gene49722:CDS | 60.0% | |
| GCTTCGGCTGCATGGAAGAG+TGG | + | chr4.4:7872113-7872132 | MS.gene49722:CDS | 60.0% | |
| !! | TGCACGGGCGCTGGAAAAGT+GGG | + | chr4.4:7872679-7872698 | MS.gene49722:CDS | 60.0% |
| !! | TTGCACGGGCGCTGGAAAAG+TGG | + | chr4.4:7872678-7872697 | MS.gene49722:CDS | 60.0% |
| !! | GCACGGGCGCTGGAAAAGTG+GGG | + | chr4.4:7872680-7872699 | MS.gene49722:CDS | 65.0% |
| !! | CGGGCGCTGGAAAAGTGGGG+TGG | + | chr4.4:7872683-7872702 | MS.gene49722:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 7869033 | 7872916 | 7869033 | ID=MS.gene49722 |
| chr4.4 | mRNA | 7869033 | 7872916 | 7869033 | ID=MS.gene49722.t1;Parent=MS.gene49722 |
| chr4.4 | exon | 7869033 | 7869400 | 7869033 | ID=MS.gene49722.t1.exon1;Parent=MS.gene49722.t1 |
| chr4.4 | CDS | 7869033 | 7869400 | 7869033 | ID=cds.MS.gene49722.t1;Parent=MS.gene49722.t1 |
| chr4.4 | exon | 7869730 | 7869850 | 7869730 | ID=MS.gene49722.t1.exon2;Parent=MS.gene49722.t1 |
| chr4.4 | CDS | 7869730 | 7869850 | 7869730 | ID=cds.MS.gene49722.t1;Parent=MS.gene49722.t1 |
| chr4.4 | exon | 7870107 | 7870192 | 7870107 | ID=MS.gene49722.t1.exon3;Parent=MS.gene49722.t1 |
| chr4.4 | CDS | 7870107 | 7870192 | 7870107 | ID=cds.MS.gene49722.t1;Parent=MS.gene49722.t1 |
| chr4.4 | exon | 7870294 | 7870711 | 7870294 | ID=MS.gene49722.t1.exon4;Parent=MS.gene49722.t1 |
| chr4.4 | CDS | 7870294 | 7870711 | 7870294 | ID=cds.MS.gene49722.t1;Parent=MS.gene49722.t1 |
| chr4.4 | exon | 7870806 | 7870906 | 7870806 | ID=MS.gene49722.t1.exon5;Parent=MS.gene49722.t1 |
| chr4.4 | CDS | 7870806 | 7870906 | 7870806 | ID=cds.MS.gene49722.t1;Parent=MS.gene49722.t1 |
| chr4.4 | exon | 7871029 | 7871095 | 7871029 | ID=MS.gene49722.t1.exon6;Parent=MS.gene49722.t1 |
| chr4.4 | CDS | 7871029 | 7871095 | 7871029 | ID=cds.MS.gene49722.t1;Parent=MS.gene49722.t1 |
| chr4.4 | exon | 7871313 | 7871540 | 7871313 | ID=MS.gene49722.t1.exon7;Parent=MS.gene49722.t1 |
| chr4.4 | CDS | 7871313 | 7871540 | 7871313 | ID=cds.MS.gene49722.t1;Parent=MS.gene49722.t1 |
| chr4.4 | exon | 7871805 | 7872263 | 7871805 | ID=MS.gene49722.t1.exon8;Parent=MS.gene49722.t1 |
| chr4.4 | CDS | 7871805 | 7872263 | 7871805 | ID=cds.MS.gene49722.t1;Parent=MS.gene49722.t1 |
| chr4.4 | exon | 7872445 | 7872517 | 7872445 | ID=MS.gene49722.t1.exon9;Parent=MS.gene49722.t1 |
| chr4.4 | CDS | 7872445 | 7872517 | 7872445 | ID=cds.MS.gene49722.t1;Parent=MS.gene49722.t1 |
| chr4.4 | exon | 7872666 | 7872916 | 7872666 | ID=MS.gene49722.t1.exon10;Parent=MS.gene49722.t1 |
| chr4.4 | CDS | 7872666 | 7872916 | 7872666 | ID=cds.MS.gene49722.t1;Parent=MS.gene49722.t1 |
| Gene Sequence |
| Protein sequence |
