Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83053.t1 | XP_013466593.1 | 94.2 | 172 | 10 | 0 | 1 | 172 | 1 | 172 | 9.50E-88 | 332.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83053.t1 | A0A072VF21 | 94.2 | 172 | 10 | 0 | 1 | 172 | 1 | 172 | 6.8e-88 | 332.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049346 | MS.gene83053 | 0.819109 | 1.38E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene83053 | 0.841878 | 3.64E-58 | -1.69E-46 |
| MS.gene049661 | MS.gene83053 | 0.847306 | 1.26E-59 | -1.69E-46 |
| MS.gene049662 | MS.gene83053 | 0.842538 | 2.43E-58 | -1.69E-46 |
| MS.gene049758 | MS.gene83053 | 0.859742 | 3.35E-63 | -1.69E-46 |
| MS.gene049910 | MS.gene83053 | 0.834949 | 2.23E-56 | -1.69E-46 |
| MS.gene050076 | MS.gene83053 | 0.829945 | 3.87E-55 | -1.69E-46 |
| MS.gene050231 | MS.gene83053 | 0.801184 | 1.01E-48 | -1.69E-46 |
| MS.gene050301 | MS.gene83053 | 0.883229 | 5.36E-71 | -1.69E-46 |
| MS.gene050397 | MS.gene83053 | 0.823486 | 1.35E-53 | -1.69E-46 |
| MS.gene050406 | MS.gene83053 | 0.834953 | 2.22E-56 | -1.69E-46 |
| MS.gene050432 | MS.gene83053 | 0.810957 | 8.90E-51 | -1.69E-46 |
| MS.gene050464 | MS.gene83053 | 0.838228 | 3.26E-57 | -1.69E-46 |
| MS.gene050529 | MS.gene83053 | 0.845883 | 3.08E-59 | -1.69E-46 |
| MS.gene050558 | MS.gene83053 | 0.802679 | 5.00E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene83053 | 0.83199 | 1.22E-55 | -1.69E-46 |
| MS.gene050812 | MS.gene83053 | 0.808636 | 2.81E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene83053 | 0.845961 | 2.93E-59 | -1.69E-46 |
| MS.gene05105 | MS.gene83053 | 0.806685 | 7.30E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene83053 | 0.869693 | 2.56E-66 | -1.69E-46 |
| MS.gene051582 | MS.gene83053 | 0.861096 | 1.30E-63 | -1.69E-46 |
| MS.gene051663 | MS.gene83053 | 0.809455 | 1.88E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene83053 | 0.831659 | 1.47E-55 | -1.69E-46 |
| MS.gene051877 | MS.gene83053 | 0.822528 | 2.26E-53 | -1.69E-46 |
| MS.gene052077 | MS.gene83053 | 0.814728 | 1.33E-51 | -1.69E-46 |
| MS.gene052078 | MS.gene83053 | 0.865061 | 7.76E-65 | -1.69E-46 |
| MS.gene052178 | MS.gene83053 | 0.836006 | 1.21E-56 | -1.69E-46 |
| MS.gene052188 | MS.gene83053 | 0.84998 | 2.28E-60 | -1.69E-46 |
| MS.gene052253 | MS.gene83053 | 0.829875 | 4.03E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene83053 | 0.870154 | 1.81E-66 | -1.69E-46 |
| MS.gene052322 | MS.gene83053 | 0.823434 | 1.39E-53 | -1.69E-46 |
| MS.gene052326 | MS.gene83053 | 0.830282 | 3.21E-55 | -1.69E-46 |
| MS.gene052340 | MS.gene83053 | 0.84079 | 7.03E-58 | -1.69E-46 |
| MS.gene052421 | MS.gene83053 | 0.818076 | 2.37E-52 | -1.69E-46 |
| MS.gene052481 | MS.gene83053 | 0.800962 | 1.13E-48 | -1.69E-46 |
| MS.gene052485 | MS.gene83053 | 0.830588 | 2.70E-55 | -1.69E-46 |
| MS.gene053103 | MS.gene83053 | 0.820571 | 6.39E-53 | -1.69E-46 |
| MS.gene053209 | MS.gene83053 | 0.808562 | 2.91E-50 | -1.69E-46 |
| MS.gene053557 | MS.gene83053 | 0.829518 | 4.92E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene83053 | 0.879472 | 1.21E-69 | -1.69E-46 |
| MS.gene053907 | MS.gene83053 | 0.811152 | 8.08E-51 | -1.69E-46 |
| MS.gene053928 | MS.gene83053 | 0.85285 | 3.52E-61 | -1.69E-46 |
| MS.gene053971 | MS.gene83053 | 0.824665 | 7.14E-54 | -1.69E-46 |
| MS.gene054011 | MS.gene83053 | 0.802357 | 5.83E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene83053 | 0.846025 | 2.81E-59 | -1.69E-46 |
| MS.gene054376 | MS.gene83053 | 0.801698 | 7.96E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene83053 | 0.826855 | 2.16E-54 | -1.69E-46 |
| MS.gene05455 | MS.gene83053 | 0.828933 | 6.82E-55 | -1.69E-46 |
| MS.gene054802 | MS.gene83053 | 0.814049 | 1.88E-51 | -1.69E-46 |
| MS.gene054803 | MS.gene83053 | 0.811751 | 5.98E-51 | -1.69E-46 |
| MS.gene054804 | MS.gene83053 | 0.813744 | 2.19E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene83053 | 0.810322 | 1.22E-50 | -1.69E-46 |
| MS.gene054983 | MS.gene83053 | 0.816309 | 5.91E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene83053 | 0.854446 | 1.22E-61 | -1.69E-46 |
| MS.gene055277 | MS.gene83053 | 0.860456 | 2.04E-63 | -1.69E-46 |
| MS.gene055390 | MS.gene83053 | 0.829088 | 6.26E-55 | -1.69E-46 |
| MS.gene055422 | MS.gene83053 | 0.870988 | 9.62E-67 | -1.69E-46 |
| MS.gene055428 | MS.gene83053 | 0.884735 | 1.49E-71 | -1.69E-46 |
| MS.gene05553 | MS.gene83053 | 0.816882 | 4.40E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene83053 | 0.805688 | 1.18E-49 | -1.69E-46 |
| MS.gene055712 | MS.gene83053 | 0.829675 | 4.51E-55 | -1.69E-46 |
| MS.gene056191 | MS.gene83053 | 0.831389 | 1.72E-55 | -1.69E-46 |
| MS.gene056407 | MS.gene83053 | 0.863085 | 3.20E-64 | -1.69E-46 |
| MS.gene056451 | MS.gene83053 | 0.832032 | 1.19E-55 | -1.69E-46 |
| MS.gene056497 | MS.gene83053 | 0.816793 | 4.60E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene83053 | 0.864283 | 1.36E-64 | -1.69E-46 |
| MS.gene056899 | MS.gene83053 | -0.806687 | 7.29E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene83053 | 0.864867 | 8.93E-65 | -1.69E-46 |
| MS.gene057121 | MS.gene83053 | 0.843258 | 1.57E-58 | -1.69E-46 |
| MS.gene057123 | MS.gene83053 | 0.829514 | 4.93E-55 | -1.69E-46 |
| MS.gene057146 | MS.gene83053 | 0.809659 | 1.70E-50 | -1.69E-46 |
| MS.gene057245 | MS.gene83053 | 0.84273 | 2.16E-58 | -1.69E-46 |
| MS.gene057295 | MS.gene83053 | 0.805936 | 1.05E-49 | -1.69E-46 |
| MS.gene05733 | MS.gene83053 | 0.817786 | 2.75E-52 | -1.69E-46 |
| MS.gene057439 | MS.gene83053 | 0.830186 | 3.38E-55 | -1.69E-46 |
| MS.gene057448 | MS.gene83053 | 0.811261 | 7.65E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene83053 | 0.81894 | 1.51E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene83053 | 0.809971 | 1.45E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene83053 | 0.808198 | 3.48E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene83053 | 0.876596 | 1.23E-68 | -1.69E-46 |
| MS.gene05811 | MS.gene83053 | 0.858405 | 8.43E-63 | -1.69E-46 |
| MS.gene058142 | MS.gene83053 | 0.827543 | 1.48E-54 | -1.69E-46 |
| MS.gene058233 | MS.gene83053 | 0.864104 | 1.55E-64 | -1.69E-46 |
| MS.gene058276 | MS.gene83053 | 0.816027 | 6.83E-52 | -1.69E-46 |
| MS.gene058293 | MS.gene83053 | 0.874313 | 7.44E-68 | -1.69E-46 |
| MS.gene058660 | MS.gene83053 | 0.869294 | 3.45E-66 | -1.69E-46 |
| MS.gene058845 | MS.gene83053 | 0.801369 | 9.30E-49 | -1.69E-46 |
| MS.gene05886 | MS.gene83053 | 0.805969 | 1.03E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene83053 | 0.80471 | 1.90E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene83053 | 0.864062 | 1.59E-64 | -1.69E-46 |
| MS.gene059141 | MS.gene83053 | 0.802714 | 4.92E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene83053 | 0.805417 | 1.35E-49 | -1.69E-46 |
| MS.gene059294 | MS.gene83053 | 0.802948 | 4.40E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene83053 | 0.81308 | 3.07E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene83053 | 0.847088 | 1.44E-59 | -1.69E-46 |
| MS.gene059597 | MS.gene83053 | 0.854588 | 1.11E-61 | -1.69E-46 |
| MS.gene059676 | MS.gene83053 | 0.831662 | 1.47E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene83053 | 0.873463 | 1.44E-67 | -1.69E-46 |
| MS.gene059692 | MS.gene83053 | 0.876959 | 9.22E-69 | -1.69E-46 |
| MS.gene059695 | MS.gene83053 | 0.875407 | 3.16E-68 | -1.69E-46 |
| MS.gene05984 | MS.gene83053 | 0.849913 | 2.38E-60 | -1.69E-46 |
| MS.gene059894 | MS.gene83053 | 0.867127 | 1.72E-65 | -1.69E-46 |
| MS.gene06037 | MS.gene83053 | 0.84153 | 4.49E-58 | -1.69E-46 |
| MS.gene060403 | MS.gene83053 | 0.833694 | 4.60E-56 | -1.69E-46 |
| MS.gene060407 | MS.gene83053 | 0.81425 | 1.69E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene83053 | 0.896611 | 3.13E-76 | -1.69E-46 |
| MS.gene061051 | MS.gene83053 | -0.809302 | 2.02E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83053.t1 | MTR_1g032560 | 94.186 | 172 | 10 | 0 | 1 | 172 | 1 | 172 | 4.45e-112 | 316 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83053.t1 | AT2G01755 | 58.475 | 118 | 49 | 0 | 54 | 171 | 56 | 173 | 1.58e-42 | 140 |
| MS.gene83053.t1 | AT2G01755 | 58.475 | 118 | 49 | 0 | 54 | 171 | 62 | 179 | 1.97e-42 | 140 |
Find 46 sgRNAs with CRISPR-Local
Find 60 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTCTATAGATAGAATAAA+AGG | 0.213144 | 1.4:+17113856 | MS.gene83053:CDS |
| ATCAAAGAGGTATAAGCTTT+TGG | 0.314010 | 1.4:+17113345 | MS.gene83053:CDS |
| TAAGTACTTCTACTTCAATT+TGG | 0.331886 | 1.4:-17113511 | None:intergenic |
| GGAAACTTGTCAATTGATAA+TGG | 0.335882 | 1.4:-17113272 | None:intergenic |
| CCATGGCATCATTGTCCATT+TGG | 0.363669 | 1.4:-17113234 | None:intergenic |
| AGAATGCTTCTTGTTGGGTC+AGG | 0.383377 | 1.4:-17113814 | None:intergenic |
| GAAGATAGAGATGATGAGTA+TGG | 0.389990 | 1.4:+17113407 | MS.gene83053:CDS |
| GCTGGAAGAATGCTTCTTGT+TGG | 0.394629 | 1.4:-17113820 | None:intergenic |
| CTTCTGCAGATACTCAATAT+TGG | 0.406034 | 1.4:-17113893 | None:intergenic |
| CTGGAAGAATGCTTCTTGTT+GGG | 0.406470 | 1.4:-17113819 | None:intergenic |
| GACTTTATCACTGCCCTGGC+TGG | 0.412026 | 1.4:-17113838 | None:intergenic |
| TTGTCAATTGATAATGGTAT+AGG | 0.420243 | 1.4:-17113266 | None:intergenic |
| AGTAGAAGTACTTATCTTCA+AGG | 0.426944 | 1.4:+17113520 | MS.gene83053:CDS |
| TGTCCATTTGGCCATACCCT+TGG | 0.430122 | 1.4:-17113222 | None:intergenic |
| TCAATATTGGCAGGGTCAAA+AGG | 0.439860 | 1.4:-17113880 | None:intergenic |
| GTCCATTTGGCCATACCCTT+GGG | 0.442034 | 1.4:-17113221 | None:intergenic |
| CAATGAGGAAATTTCAAAGT+TGG | 0.445765 | 1.4:+17113433 | MS.gene83053:CDS |
| CTCTATCTTCATCCTCATCT+TGG | 0.448503 | 1.4:-17113394 | None:intergenic |
| TGCAGATACTCAATATTGGC+AGG | 0.450870 | 1.4:-17113889 | None:intergenic |
| TTCCCAAGGGTATGGCCAAA+TGG | 0.469349 | 1.4:+17113219 | MS.gene83053:CDS |
| ATACCCTTGGGAAGTGTAGT+AGG | 0.478990 | 1.4:-17113209 | None:intergenic |
| GGACAATGATGCCATGGCCT+AGG | 0.481592 | 1.4:+17113240 | MS.gene83053:CDS |
| CAAGAAGCATTCTTCCAGCC+AGG | 0.483504 | 1.4:+17113824 | MS.gene83053:CDS |
| GAATGCTTCTTGTTGGGTCA+GGG | 0.497042 | 1.4:-17113813 | None:intergenic |
| CACAAGCTTACATTGTGAGT+TGG | 0.506810 | 1.4:-17113293 | None:intergenic |
| AGTCTATAGATAGAATAAAA+GGG | 0.523947 | 1.4:+17113857 | MS.gene83053:CDS |
| AATGCTTCTTGTTGGGTCAG+GGG | 0.544161 | 1.4:-17113812 | None:intergenic |
| TACTACACTTCCCAAGGGTA+TGG | 0.545556 | 1.4:+17113211 | MS.gene83053:CDS |
| TTTGTCTTGAATTCTTCCCA+TGG | 0.554335 | 1.4:-17113922 | None:intergenic |
| ATCTGCAGAAGGATGTTCCA+TGG | 0.555118 | 1.4:+17113905 | MS.gene83053:CDS |
| GATAATGGTATAGGTAGCCT+AGG | 0.559854 | 1.4:-17113257 | None:intergenic |
| TATAGACTTTATCACTGCCC+TGG | 0.571801 | 1.4:-17113842 | None:intergenic |
| ACTCATTGTTCATGCACTTG+TGG | 0.576626 | 1.4:+17113487 | MS.gene83053:CDS |
| GCATCCTACTACACTTCCCA+AGG | 0.594031 | 1.4:+17113205 | MS.gene83053:CDS |
| AAGAAGCATTCTTCCAGCCA+GGG | 0.602074 | 1.4:+17113825 | MS.gene83053:CDS |
| TTCTATAGTCAATCAGCAAG+AGG | 0.607447 | 1.4:+17113458 | MS.gene83053:CDS |
| AGGGGAAGTACCATAGCTCA+AGG | 0.608247 | 1.4:-17113794 | None:intergenic |
| TCTGCAGAAGGATGTTCCAT+GGG | 0.613447 | 1.4:+17113906 | MS.gene83053:CDS |
| CAATATTGAGTATCTGCAGA+AGG | 0.617485 | 1.4:+17113894 | MS.gene83053:CDS |
| CATCCTACTACACTTCCCAA+GGG | 0.625588 | 1.4:+17113206 | MS.gene83053:CDS |
| CCAAATGGACAATGATGCCA+TGG | 0.626699 | 1.4:+17113234 | MS.gene83053:CDS |
| GGTATAGGTAGCCTAGGCCA+TGG | 0.632885 | 1.4:-17113251 | None:intergenic |
| GCAAATTAGATACCAAGATG+AGG | 0.635629 | 1.4:+17113382 | MS.gene83053:CDS |
| TTAGATTTGAGCAATCAAAG+AGG | 0.645074 | 1.4:+17113332 | MS.gene83053:CDS |
| GCAGATACTCAATATTGGCA+GGG | 0.648369 | 1.4:-17113888 | None:intergenic |
| TGATGAGTATGGACACAATG+AGG | 0.651393 | 1.4:+17113418 | MS.gene83053:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAATTTGTTTGTTTTAT+TGG | - | chr1.4:17113599-17113618 | None:intergenic | 10.0% |
| !!! | TTTTTTTTCTAATTAGAAAA+AGG | + | chr1.4:17113640-17113659 | MS.gene83053:intron | 10.0% |
| !! | AAGTCTATAGATAGAATAAA+AGG | + | chr1.4:17113856-17113875 | MS.gene83053:CDS | 20.0% |
| !! | AGTCTATAGATAGAATAAAA+GGG | + | chr1.4:17113857-17113876 | MS.gene83053:CDS | 20.0% |
| !!! | TTGTTTGTTTTATTGGTTAT+TGG | - | chr1.4:17113592-17113611 | None:intergenic | 20.0% |
| ! | CCATTTGCAAAACAAAAATT+TGG | - | chr1.4:17113697-17113716 | None:intergenic | 25.0% |
| ! | TAAGTACTTCTACTTCAATT+TGG | - | chr1.4:17113514-17113533 | None:intergenic | 25.0% |
| !!! | CCAAATTTTTGTTTTGCAAA+TGG | + | chr1.4:17113694-17113713 | MS.gene83053:intron | 25.0% |
| !!! | TTGTCAATTGATAATGGTAT+AGG | - | chr1.4:17113269-17113288 | None:intergenic | 25.0% |
| ACTTATCTTCAAGGTAAGTT+TGG | + | chr1.4:17113529-17113548 | MS.gene83053:intron | 30.0% | |
| CAATGAGGAAATTTCAAAGT+TGG | + | chr1.4:17113433-17113452 | MS.gene83053:CDS | 30.0% | |
| GGAAACTTGTCAATTGATAA+TGG | - | chr1.4:17113275-17113294 | None:intergenic | 30.0% | |
| TGACAAACCATTTCATTTCA+GGG | + | chr1.4:17113760-17113779 | MS.gene83053:intron | 30.0% | |
| TTAGATTTGAGCAATCAAAG+AGG | + | chr1.4:17113332-17113351 | MS.gene83053:CDS | 30.0% | |
| !! | AGTAGAAGTACTTATCTTCA+AGG | + | chr1.4:17113520-17113539 | MS.gene83053:CDS | 30.0% |
| !! | ATCAAAGAGGTATAAGCTTT+TGG | + | chr1.4:17113345-17113364 | MS.gene83053:CDS | 30.0% |
| AGAAAACCCCTGAAATGAAA+TGG | - | chr1.4:17113770-17113789 | None:intergenic | 35.0% | |
| CAATATTGAGTATCTGCAGA+AGG | + | chr1.4:17113894-17113913 | MS.gene83053:CDS | 35.0% | |
| CTTCTGCAGATACTCAATAT+TGG | - | chr1.4:17113896-17113915 | None:intergenic | 35.0% | |
| GAAGATAGAGATGATGAGTA+TGG | + | chr1.4:17113407-17113426 | MS.gene83053:CDS | 35.0% | |
| GACAAACCATTTCATTTCAG+GGG | + | chr1.4:17113761-17113780 | MS.gene83053:intron | 35.0% | |
| GCAAATTAGATACCAAGATG+AGG | + | chr1.4:17113382-17113401 | MS.gene83053:CDS | 35.0% | |
| GTGACAAACCATTTCATTTC+AGG | + | chr1.4:17113759-17113778 | MS.gene83053:intron | 35.0% | |
| TTCTATAGTCAATCAGCAAG+AGG | + | chr1.4:17113458-17113477 | MS.gene83053:CDS | 35.0% | |
| TTTGTCTTGAATTCTTCCCA+TGG | - | chr1.4:17113925-17113944 | None:intergenic | 35.0% | |
| ! | TTTTCTTCATCCTTGAGCTA+TGG | + | chr1.4:17113784-17113803 | MS.gene83053:CDS | 35.0% |
| ACTCATTGTTCATGCACTTG+TGG | + | chr1.4:17113487-17113506 | MS.gene83053:CDS | 40.0% | |
| CACAAGCTTACATTGTGAGT+TGG | - | chr1.4:17113296-17113315 | None:intergenic | 40.0% | |
| CTCTATCTTCATCCTCATCT+TGG | - | chr1.4:17113397-17113416 | None:intergenic | 40.0% | |
| CTGGAAGAATGCTTCTTGTT+GGG | - | chr1.4:17113822-17113841 | None:intergenic | 40.0% | |
| GCAGATACTCAATATTGGCA+GGG | - | chr1.4:17113891-17113910 | None:intergenic | 40.0% | |
| TATAGACTTTATCACTGCCC+TGG | - | chr1.4:17113845-17113864 | None:intergenic | 40.0% | |
| TCAATATTGGCAGGGTCAAA+AGG | - | chr1.4:17113883-17113902 | None:intergenic | 40.0% | |
| TGATGAGTATGGACACAATG+AGG | + | chr1.4:17113418-17113437 | MS.gene83053:CDS | 40.0% | |
| TGCAGATACTCAATATTGGC+AGG | - | chr1.4:17113892-17113911 | None:intergenic | 40.0% | |
| ! | GATAATGGTATAGGTAGCCT+AGG | - | chr1.4:17113260-17113279 | None:intergenic | 40.0% |
| !! | AGAGGTATAAGCTTTTGGTG+TGG | + | chr1.4:17113350-17113369 | MS.gene83053:CDS | 40.0% |
| AATGCTTCTTGTTGGGTCAG+GGG | - | chr1.4:17113815-17113834 | None:intergenic | 45.0% | |
| AGAATGCTTCTTGTTGGGTC+AGG | - | chr1.4:17113817-17113836 | None:intergenic | 45.0% | |
| ATCTGCAGAAGGATGTTCCA+TGG | + | chr1.4:17113905-17113924 | MS.gene83053:CDS | 45.0% | |
| CATCCTACTACACTTCCCAA+GGG | + | chr1.4:17113206-17113225 | MS.gene83053:CDS | 45.0% | |
| CCAAATGGACAATGATGCCA+TGG | + | chr1.4:17113234-17113253 | MS.gene83053:CDS | 45.0% | |
| CCATGGCATCATTGTCCATT+TGG | - | chr1.4:17113237-17113256 | None:intergenic | 45.0% | |
| GAATGCTTCTTGTTGGGTCA+GGG | - | chr1.4:17113816-17113835 | None:intergenic | 45.0% | |
| GCTGGAAGAATGCTTCTTGT+TGG | - | chr1.4:17113823-17113842 | None:intergenic | 45.0% | |
| TACTACACTTCCCAAGGGTA+TGG | + | chr1.4:17113211-17113230 | MS.gene83053:CDS | 45.0% | |
| TCTGCAGAAGGATGTTCCAT+GGG | + | chr1.4:17113906-17113925 | MS.gene83053:CDS | 45.0% | |
| ! | ATACCCTTGGGAAGTGTAGT+AGG | - | chr1.4:17113212-17113231 | None:intergenic | 45.0% |
| !! | AAGAAGCATTCTTCCAGCCA+GGG | + | chr1.4:17113825-17113844 | MS.gene83053:CDS | 45.0% |
| !! | TAAGCTTTTGGTGTGGAGCA+AGG | + | chr1.4:17113357-17113376 | MS.gene83053:CDS | 45.0% |
| GCATCCTACTACACTTCCCA+AGG | + | chr1.4:17113205-17113224 | MS.gene83053:CDS | 50.0% | |
| GTCCATTTGGCCATACCCTT+GGG | - | chr1.4:17113224-17113243 | None:intergenic | 50.0% | |
| TGTCCATTTGGCCATACCCT+TGG | - | chr1.4:17113225-17113244 | None:intergenic | 50.0% | |
| ! | TTCCCAAGGGTATGGCCAAA+TGG | + | chr1.4:17113219-17113238 | MS.gene83053:CDS | 50.0% |
| !! | AGGGGAAGTACCATAGCTCA+AGG | - | chr1.4:17113797-17113816 | None:intergenic | 50.0% |
| !! | CAAGAAGCATTCTTCCAGCC+AGG | + | chr1.4:17113824-17113843 | MS.gene83053:CDS | 50.0% |
| GACTTTATCACTGCCCTGGC+TGG | - | chr1.4:17113841-17113860 | None:intergenic | 55.0% | |
| GGACAATGATGCCATGGCCT+AGG | + | chr1.4:17113240-17113259 | MS.gene83053:CDS | 55.0% | |
| GGTATAGGTAGCCTAGGCCA+TGG | - | chr1.4:17113254-17113273 | None:intergenic | 55.0% | |
| !! | GCTTTTGGTGTGGAGCAAGG+AGG | + | chr1.4:17113360-17113379 | MS.gene83053:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 17113203 | 17113960 | 17113203 | ID=MS.gene83053 |
| chr1.4 | mRNA | 17113203 | 17113960 | 17113203 | ID=MS.gene83053.t1;Parent=MS.gene83053 |
| chr1.4 | exon | 17113203 | 17113541 | 17113203 | ID=MS.gene83053.t1.exon1;Parent=MS.gene83053.t1 |
| chr1.4 | CDS | 17113203 | 17113541 | 17113203 | ID=cds.MS.gene83053.t1;Parent=MS.gene83053.t1 |
| chr1.4 | exon | 17113781 | 17113960 | 17113781 | ID=MS.gene83053.t1.exon2;Parent=MS.gene83053.t1 |
| chr1.4 | CDS | 17113781 | 17113960 | 17113781 | ID=cds.MS.gene83053.t1;Parent=MS.gene83053.t1 |
| Gene Sequence |
| Protein sequence |
