Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83843.t1 | XP_003624636.3 | 87.9 | 487 | 56 | 2 | 1 | 485 | 1 | 486 | 1.00E-248 | 869 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83843.t1 | Q9FFN2 | 38.7 | 354 | 194 | 10 | 140 | 480 | 172 | 515 | 5.3e-60 | 233.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83843.t1 | Q2HVN7 | 87.9 | 487 | 56 | 2 | 1 | 485 | 1 | 486 | 7.5e-249 | 869.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene83843 | -0.81115 | 8.09E-51 | -1.69E-46 |
| MS.gene049281 | MS.gene83843 | 0.838368 | 3.00E-57 | -1.69E-46 |
| MS.gene049285 | MS.gene83843 | -0.807136 | 5.86E-50 | -1.69E-46 |
| MS.gene049320 | MS.gene83843 | -0.826705 | 2.34E-54 | -1.69E-46 |
| MS.gene05010 | MS.gene83843 | -0.809956 | 1.46E-50 | -1.69E-46 |
| MS.gene050129 | MS.gene83843 | 0.813413 | 2.59E-51 | -1.69E-46 |
| MS.gene050363 | MS.gene83843 | 0.853589 | 2.16E-61 | -1.69E-46 |
| MS.gene050381 | MS.gene83843 | 0.862883 | 3.70E-64 | -1.69E-46 |
| MS.gene050504 | MS.gene83843 | -0.839518 | 1.51E-57 | -1.69E-46 |
| MS.gene050547 | MS.gene83843 | 0.804132 | 2.50E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene83843 | -0.823328 | 1.47E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene83843 | -0.812338 | 4.46E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene83843 | -0.812257 | 4.64E-51 | -1.69E-46 |
| MS.gene050883 | MS.gene83843 | 0.881907 | 1.62E-70 | -1.69E-46 |
| MS.gene050986 | MS.gene83843 | -0.802309 | 5.96E-49 | -1.69E-46 |
| MS.gene051044 | MS.gene83843 | 0.845414 | 4.12E-59 | -1.69E-46 |
| MS.gene05104 | MS.gene83843 | 0.810246 | 1.27E-50 | -1.69E-46 |
| MS.gene051127 | MS.gene83843 | 0.866745 | 2.28E-65 | -1.69E-46 |
| MS.gene051138 | MS.gene83843 | 0.80627 | 8.93E-50 | -1.69E-46 |
| MS.gene05141 | MS.gene83843 | 0.800124 | 1.67E-48 | -1.69E-46 |
| MS.gene051946 | MS.gene83843 | 0.842313 | 2.79E-58 | -1.69E-46 |
| MS.gene053069 | MS.gene83843 | 0.805137 | 1.54E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene83843 | -0.802543 | 5.34E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene83843 | -0.802736 | 4.87E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene83843 | 0.839765 | 1.30E-57 | -1.69E-46 |
| MS.gene053488 | MS.gene83843 | 0.824931 | 6.18E-54 | -1.69E-46 |
| MS.gene053549 | MS.gene83843 | 0.82266 | 2.10E-53 | -1.69E-46 |
| MS.gene053561 | MS.gene83843 | 0.874814 | 5.03E-68 | -1.69E-46 |
| MS.gene053826 | MS.gene83843 | 0.818262 | 2.15E-52 | -1.69E-46 |
| MS.gene053887 | MS.gene83843 | 0.801518 | 8.67E-49 | -1.69E-46 |
| MS.gene054054 | MS.gene83843 | 0.803263 | 3.79E-49 | -1.69E-46 |
| MS.gene054056 | MS.gene83843 | 0.807656 | 4.54E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene83843 | -0.819509 | 1.12E-52 | -1.69E-46 |
| MS.gene054616 | MS.gene83843 | 0.804439 | 2.16E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene83843 | -0.804354 | 2.25E-49 | -1.69E-46 |
| MS.gene054708 | MS.gene83843 | 0.86974 | 2.47E-66 | -1.69E-46 |
| MS.gene054954 | MS.gene83843 | -0.807166 | 5.77E-50 | -1.69E-46 |
| MS.gene054959 | MS.gene83843 | 0.839772 | 1.30E-57 | -1.69E-46 |
| MS.gene055124 | MS.gene83843 | 0.836758 | 7.76E-57 | -1.69E-46 |
| MS.gene055154 | MS.gene83843 | 0.866798 | 2.19E-65 | -1.69E-46 |
| MS.gene055362 | MS.gene83843 | -0.822636 | 2.13E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene83843 | -0.828889 | 6.99E-55 | -1.69E-46 |
| MS.gene055549 | MS.gene83843 | 0.809549 | 1.79E-50 | -1.69E-46 |
| MS.gene055550 | MS.gene83843 | 0.814147 | 1.79E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene83843 | -0.802666 | 5.03E-49 | -1.69E-46 |
| MS.gene055942 | MS.gene83843 | 0.821577 | 3.75E-53 | -1.69E-46 |
| MS.gene056310 | MS.gene83843 | 0.817635 | 2.98E-52 | -1.69E-46 |
| MS.gene056311 | MS.gene83843 | 0.841674 | 4.12E-58 | -1.69E-46 |
| MS.gene056313 | MS.gene83843 | 0.840224 | 9.89E-58 | -1.69E-46 |
| MS.gene056408 | MS.gene83843 | 0.824974 | 6.03E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene83843 | -0.81173 | 6.05E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene83843 | -0.80715 | 5.82E-50 | -1.69E-46 |
| MS.gene056761 | MS.gene83843 | 0.807866 | 4.10E-50 | -1.69E-46 |
| MS.gene057014 | MS.gene83843 | 0.838657 | 2.52E-57 | -1.69E-46 |
| MS.gene058099 | MS.gene83843 | 0.819211 | 1.31E-52 | -1.69E-46 |
| MS.gene058109 | MS.gene83843 | 0.807197 | 5.68E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene83843 | 0.809452 | 1.88E-50 | -1.69E-46 |
| MS.gene058173 | MS.gene83843 | 0.801276 | 9.72E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene83843 | 0.810552 | 1.09E-50 | -1.69E-46 |
| MS.gene058268 | MS.gene83843 | 0.806499 | 7.98E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene83843 | -0.83343 | 5.36E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene83843 | -0.804924 | 1.71E-49 | -1.69E-46 |
| MS.gene058493 | MS.gene83843 | 0.806476 | 8.07E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene83843 | -0.814656 | 1.38E-51 | -1.69E-46 |
| MS.gene058628 | MS.gene83843 | 0.837357 | 5.45E-57 | -1.69E-46 |
| MS.gene058629 | MS.gene83843 | 0.849886 | 2.42E-60 | -1.69E-46 |
| MS.gene058630 | MS.gene83843 | 0.841272 | 5.25E-58 | -1.69E-46 |
| MS.gene058691 | MS.gene83843 | 0.808806 | 2.58E-50 | -1.69E-46 |
| MS.gene058840 | MS.gene83843 | 0.813463 | 2.53E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene83843 | -0.838413 | 2.92E-57 | -1.69E-46 |
| MS.gene059223 | MS.gene83843 | 0.80837 | 3.20E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene83843 | -0.801581 | 8.42E-49 | -1.69E-46 |
| MS.gene059690 | MS.gene83843 | 0.806319 | 8.71E-50 | -1.69E-46 |
| MS.gene059691 | MS.gene83843 | 0.817115 | 3.90E-52 | -1.69E-46 |
| MS.gene059694 | MS.gene83843 | 0.821804 | 3.32E-53 | -1.69E-46 |
| MS.gene059697 | MS.gene83843 | 0.828841 | 7.18E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene83843 | -0.805545 | 1.27E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene83843 | -0.807711 | 4.42E-50 | -1.69E-46 |
| MS.gene059916 | MS.gene83843 | 0.823175 | 1.60E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene83843 | -0.840904 | 6.56E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83843.t1 | MTR_7g085840 | 97.590 | 332 | 8 | 0 | 154 | 485 | 1 | 332 | 0.0 | 683 |
| MS.gene83843.t1 | MTR_5g031480 | 42.779 | 367 | 189 | 10 | 119 | 478 | 61 | 413 | 4.20e-94 | 291 |
| MS.gene83843.t1 | MTR_5g049790 | 42.287 | 376 | 190 | 11 | 105 | 478 | 83 | 433 | 2.73e-91 | 285 |
| MS.gene83843.t1 | MTR_7g103260 | 39.601 | 351 | 185 | 10 | 140 | 475 | 54 | 392 | 9.81e-72 | 233 |
| MS.gene83843.t1 | MTR_7g103270 | 38.095 | 357 | 192 | 9 | 140 | 480 | 55 | 398 | 1.22e-68 | 225 |
| MS.gene83843.t1 | MTR_1g061760 | 38.596 | 342 | 188 | 10 | 147 | 475 | 147 | 479 | 1.22e-65 | 219 |
| MS.gene83843.t1 | MTR_3g097310 | 36.031 | 383 | 213 | 11 | 114 | 480 | 125 | 491 | 9.46e-65 | 218 |
| MS.gene83843.t1 | MTR_3g106690 | 38.286 | 350 | 192 | 11 | 147 | 481 | 52 | 392 | 1.89e-63 | 211 |
| MS.gene83843.t1 | MTR_7g103150 | 36.134 | 357 | 190 | 12 | 140 | 475 | 141 | 480 | 4.07e-62 | 210 |
| MS.gene83843.t1 | MTR_4g100730 | 35.196 | 358 | 198 | 10 | 140 | 475 | 186 | 531 | 9.53e-62 | 211 |
| MS.gene83843.t1 | MTR_3g110198 | 36.565 | 361 | 183 | 14 | 140 | 475 | 250 | 589 | 2.96e-60 | 208 |
| MS.gene83843.t1 | MTR_4g115540 | 35.638 | 376 | 201 | 11 | 122 | 475 | 263 | 619 | 1.31e-58 | 204 |
| MS.gene83843.t1 | MTR_1g006600 | 35.754 | 358 | 190 | 13 | 140 | 475 | 243 | 582 | 3.96e-58 | 202 |
| MS.gene83843.t1 | MTR_1g090733 | 36.080 | 352 | 197 | 12 | 140 | 477 | 208 | 545 | 2.00e-57 | 199 |
| MS.gene83843.t1 | MTR_3g080690 | 34.400 | 375 | 205 | 11 | 128 | 480 | 89 | 444 | 2.48e-57 | 196 |
| MS.gene83843.t1 | MTR_5g031480 | 39.007 | 282 | 154 | 8 | 119 | 394 | 61 | 330 | 3.20e-57 | 193 |
| MS.gene83843.t1 | MTR_8g102840 | 35.278 | 360 | 190 | 13 | 140 | 475 | 265 | 605 | 4.69e-57 | 199 |
| MS.gene83843.t1 | MTR_3g110200 | 34.986 | 363 | 186 | 12 | 140 | 475 | 247 | 586 | 9.70e-57 | 198 |
| MS.gene83843.t1 | MTR_5g031480 | 39.362 | 282 | 151 | 9 | 119 | 393 | 61 | 329 | 1.36e-56 | 192 |
| MS.gene83843.t1 | MTR_3g081240 | 33.681 | 383 | 235 | 9 | 109 | 480 | 72 | 446 | 2.30e-56 | 194 |
| MS.gene83843.t1 | MTR_4g115530 | 33.858 | 381 | 211 | 13 | 117 | 475 | 24 | 385 | 5.14e-56 | 192 |
| MS.gene83843.t1 | MTR_4g115530 | 34.593 | 344 | 190 | 12 | 154 | 475 | 1 | 331 | 4.03e-53 | 182 |
| MS.gene83843.t1 | MTR_4g115460 | 33.151 | 365 | 207 | 11 | 140 | 482 | 115 | 464 | 3.03e-51 | 181 |
| MS.gene83843.t1 | MTR_5g049790 | 38.583 | 254 | 141 | 8 | 105 | 356 | 83 | 323 | 6.57e-47 | 165 |
| MS.gene83843.t1 | MTR_5g049790 | 39.583 | 240 | 130 | 8 | 119 | 356 | 114 | 340 | 5.98e-46 | 163 |
| MS.gene83843.t1 | MTR_4g115540 | 32.990 | 291 | 155 | 10 | 122 | 390 | 263 | 535 | 2.31e-31 | 127 |
| MS.gene83843.t1 | MTR_8g102840 | 32.117 | 274 | 144 | 12 | 140 | 389 | 265 | 520 | 6.56e-29 | 120 |
| MS.gene83843.t1 | MTR_5g081290 | 27.027 | 333 | 153 | 13 | 154 | 478 | 1 | 251 | 4.42e-28 | 112 |
| MS.gene83843.t1 | MTR_2g084245 | 27.532 | 316 | 195 | 9 | 186 | 471 | 115 | 426 | 2.74e-25 | 108 |
| MS.gene83843.t1 | MTR_4g057500 | 26.814 | 317 | 196 | 11 | 186 | 471 | 133 | 444 | 5.94e-23 | 101 |
| MS.gene83843.t1 | MTR_8g096160 | 25.484 | 310 | 205 | 8 | 186 | 471 | 77 | 384 | 8.29e-22 | 97.8 |
| MS.gene83843.t1 | MTR_8g096140 | 25.161 | 310 | 206 | 8 | 186 | 471 | 77 | 384 | 1.34e-20 | 94.4 |
| MS.gene83843.t1 | MTR_3g037720 | 24.579 | 297 | 196 | 9 | 203 | 478 | 188 | 477 | 1.92e-17 | 85.1 |
| MS.gene83843.t1 | MTR_7g087100 | 26.117 | 291 | 174 | 11 | 204 | 467 | 190 | 466 | 1.09e-15 | 79.7 |
| MS.gene83843.t1 | MTR_6g027310 | 26.421 | 299 | 175 | 11 | 198 | 467 | 179 | 461 | 2.96e-14 | 75.5 |
| MS.gene83843.t1 | MTR_4g084200 | 24.638 | 276 | 180 | 10 | 205 | 457 | 163 | 433 | 4.34e-14 | 74.7 |
| MS.gene83843.t1 | MTR_4g077920 | 25.685 | 292 | 169 | 12 | 196 | 457 | 173 | 446 | 5.31e-14 | 74.3 |
| MS.gene83843.t1 | MTR_4g077920 | 25.685 | 292 | 169 | 12 | 196 | 457 | 173 | 446 | 7.03e-14 | 74.3 |
| MS.gene83843.t1 | MTR_1g029350 | 25.284 | 352 | 210 | 13 | 157 | 471 | 73 | 408 | 7.86e-14 | 73.9 |
| MS.gene83843.t1 | MTR_4g077920 | 26.378 | 254 | 146 | 10 | 232 | 457 | 148 | 388 | 1.45e-13 | 72.8 |
| MS.gene83843.t1 | MTR_4g084200 | 25.000 | 252 | 162 | 9 | 205 | 433 | 163 | 410 | 2.61e-12 | 68.9 |
| MS.gene83843.t1 | MTR_4g084200 | 25.000 | 252 | 162 | 9 | 205 | 433 | 163 | 410 | 3.58e-12 | 68.6 |
| MS.gene83843.t1 | MTR_8g080490 | 23.448 | 290 | 191 | 8 | 205 | 471 | 117 | 398 | 5.35e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83843.t1 | AT4G38040 | 45.349 | 344 | 173 | 8 | 138 | 474 | 84 | 419 | 1.57e-95 | 295 |
| MS.gene83843.t1 | AT4G38040 | 42.812 | 320 | 168 | 8 | 138 | 450 | 84 | 395 | 1.62e-77 | 248 |
| MS.gene83843.t1 | AT4G16745 | 36.524 | 397 | 214 | 13 | 101 | 472 | 141 | 524 | 3.03e-70 | 233 |
| MS.gene83843.t1 | AT5G03795 | 38.420 | 367 | 187 | 11 | 132 | 480 | 170 | 515 | 1.18e-66 | 223 |
| MS.gene83843.t1 | AT4G16745 | 36.504 | 389 | 209 | 13 | 101 | 464 | 141 | 516 | 6.01e-65 | 220 |
| MS.gene83843.t1 | AT5G37000 | 37.853 | 354 | 188 | 11 | 140 | 475 | 208 | 547 | 3.51e-64 | 218 |
| MS.gene83843.t1 | AT5G11130 | 34.688 | 369 | 202 | 10 | 137 | 483 | 128 | 479 | 5.76e-60 | 204 |
| MS.gene83843.t1 | AT5G11610 | 36.182 | 351 | 198 | 13 | 140 | 475 | 202 | 541 | 2.55e-58 | 202 |
| MS.gene83843.t1 | AT5G11130 | 34.943 | 352 | 190 | 10 | 154 | 483 | 1 | 335 | 3.75e-58 | 196 |
| MS.gene83843.t1 | AT4G32790 | 36.314 | 369 | 187 | 14 | 136 | 475 | 240 | 589 | 1.19e-57 | 201 |
| MS.gene83843.t1 | AT4G32790 | 36.314 | 369 | 187 | 14 | 136 | 475 | 240 | 589 | 1.19e-57 | 201 |
| MS.gene83843.t1 | AT4G32790 | 36.314 | 369 | 187 | 14 | 136 | 475 | 240 | 589 | 1.19e-57 | 201 |
| MS.gene83843.t1 | AT5G19670 | 34.262 | 359 | 195 | 11 | 140 | 475 | 263 | 603 | 1.77e-57 | 201 |
| MS.gene83843.t1 | AT5G19670 | 34.262 | 359 | 195 | 11 | 140 | 475 | 263 | 603 | 1.77e-57 | 201 |
| MS.gene83843.t1 | AT5G25310 | 34.066 | 364 | 208 | 9 | 137 | 481 | 130 | 480 | 9.45e-57 | 196 |
| MS.gene83843.t1 | AT5G20260 | 34.341 | 364 | 215 | 12 | 127 | 475 | 106 | 460 | 3.82e-55 | 191 |
| MS.gene83843.t1 | AT5G25820 | 33.795 | 361 | 196 | 12 | 140 | 475 | 306 | 648 | 3.10e-54 | 192 |
| MS.gene83843.t1 | AT3G07620 | 33.875 | 369 | 214 | 11 | 130 | 481 | 104 | 459 | 5.00e-54 | 188 |
| MS.gene83843.t1 | AT5G20260 | 35.191 | 341 | 197 | 12 | 153 | 478 | 27 | 358 | 5.23e-54 | 185 |
| MS.gene83843.t1 | AT3G42180 | 33.787 | 367 | 211 | 10 | 131 | 478 | 113 | 466 | 6.59e-54 | 188 |
| MS.gene83843.t1 | AT5G20260 | 35.000 | 340 | 197 | 12 | 154 | 478 | 1 | 331 | 1.77e-53 | 183 |
| MS.gene83843.t1 | AT3G42180 | 34.593 | 344 | 199 | 9 | 154 | 478 | 1 | 337 | 2.19e-53 | 183 |
| MS.gene83843.t1 | AT5G33290 | 32.676 | 355 | 217 | 10 | 138 | 475 | 144 | 493 | 1.73e-50 | 179 |
| MS.gene83843.t1 | AT5G11610 | 31.907 | 257 | 151 | 11 | 140 | 382 | 202 | 448 | 1.21e-25 | 109 |
| MS.gene83843.t1 | AT2G28110 | 25.472 | 318 | 201 | 9 | 186 | 471 | 120 | 433 | 2.27e-22 | 100 |
| MS.gene83843.t1 | AT5G22940 | 26.687 | 326 | 187 | 14 | 186 | 472 | 136 | 448 | 7.74e-22 | 98.6 |
| MS.gene83843.t1 | AT5G22940 | 26.687 | 326 | 187 | 14 | 186 | 472 | 165 | 477 | 8.49e-22 | 98.6 |
| MS.gene83843.t1 | AT1G27440 | 24.839 | 310 | 201 | 9 | 186 | 468 | 73 | 377 | 9.30e-20 | 91.7 |
| MS.gene83843.t1 | AT5G11610 | 36.923 | 130 | 73 | 4 | 140 | 264 | 202 | 327 | 1.69e-17 | 84.3 |
| MS.gene83843.t1 | AT3G03650 | 24.221 | 417 | 254 | 17 | 108 | 472 | 69 | 475 | 1.53e-16 | 82.4 |
| MS.gene83843.t1 | AT1G74680 | 26.642 | 274 | 163 | 10 | 187 | 433 | 133 | 395 | 6.68e-15 | 77.4 |
| MS.gene83843.t1 | AT5G44930 | 26.966 | 267 | 171 | 10 | 205 | 454 | 129 | 388 | 8.53e-15 | 77.0 |
| MS.gene83843.t1 | AT5G44930 | 26.966 | 267 | 171 | 10 | 205 | 454 | 129 | 388 | 8.53e-15 | 77.0 |
| MS.gene83843.t1 | AT5G44930 | 26.953 | 256 | 163 | 10 | 205 | 443 | 129 | 377 | 2.98e-13 | 71.6 |
| MS.gene83843.t1 | AT3G45400 | 26.408 | 284 | 180 | 12 | 205 | 467 | 157 | 432 | 7.52e-13 | 70.9 |
| MS.gene83843.t1 | AT2G35100 | 25.182 | 274 | 176 | 11 | 205 | 457 | 130 | 395 | 3.28e-11 | 65.9 |
Find 97 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACGGTTCAGGAAAATTTA+AGG | 0.187479 | 7.4:-21645328 | MS.gene83843:CDS |
| GGAGAAGGAAGAATGAATTT+TGG | 0.206250 | 7.4:+21647312 | None:intergenic |
| ATATGGTTATGTATGAATTA+TGG | 0.236996 | 7.4:-21644018 | MS.gene83843:CDS |
| AAGTTCTATACCTATTGTTT+TGG | 0.284491 | 7.4:-21643987 | MS.gene83843:CDS |
| TGACTTTGATGCATTCTATA+TGG | 0.287970 | 7.4:-21644035 | MS.gene83843:CDS |
| TTCCAATTGGGTCATGGCCT+TGG | 0.288004 | 7.4:-21647225 | MS.gene83843:CDS |
| ATGCATGCCTACCACAAATT+TGG | 0.291197 | 7.4:-21644813 | MS.gene83843:CDS |
| CGTAGACTTGCTATGGAAAA+AGG | 0.292417 | 7.4:+21645069 | None:intergenic |
| CCAACCTTGTTTCATCAAAT+AGG | 0.304692 | 7.4:-21644771 | MS.gene83843:intron |
| ATTGGTGATTCATTATACTA+TGG | 0.326408 | 7.4:-21644265 | MS.gene83843:CDS |
| CATACCCTTTGAGCTGGATT+GGG | 0.333824 | 7.4:+21647176 | None:intergenic |
| CAAGTCTCATACTTTCCAAT+TGG | 0.342232 | 7.4:-21647238 | MS.gene83843:CDS |
| ATAGAAGAGAATGGAAAATA+TGG | 0.344052 | 7.4:+21647413 | None:intergenic |
| GCATACCCTTTGAGCTGGAT+TGG | 0.354741 | 7.4:+21647175 | None:intergenic |
| CATAGTCTCTAATGAAATCT+TGG | 0.366128 | 7.4:+21645016 | None:intergenic |
| CTGAAAGGTATAGTTAGTTC+TGG | 0.366270 | 7.4:-21644127 | MS.gene83843:CDS |
| CCATACGGTGATGAGTTATT+AGG | 0.385062 | 7.4:-21644337 | MS.gene83843:CDS |
| AAGTGGTTATATTGCTCATA+AGG | 0.385596 | 7.4:-21644836 | MS.gene83843:CDS |
| GGCAAACCCCGTTGACTTTG+TGG | 0.400455 | 7.4:+21647201 | None:intergenic |
| ATGATTGTTGTGTAAGGTAT+TGG | 0.414772 | 7.4:+21647275 | None:intergenic |
| CCTTGGACCACAAAGTCAAC+GGG | 0.437971 | 7.4:-21647208 | MS.gene83843:CDS |
| GTTAAGAGAGCTAAGGTAGT+TGG | 0.438077 | 7.4:+21647435 | None:intergenic |
| TATGTGGCATGTCATTCAAT+TGG | 0.444024 | 7.4:-21644934 | MS.gene83843:CDS |
| TCATCAAGTTATTTCTTAAG+TGG | 0.445359 | 7.4:-21644853 | MS.gene83843:CDS |
| AGAAGAATGTGTTGAAGGTA+AGG | 0.445791 | 7.4:-21644087 | MS.gene83843:CDS |
| TAATAGTTGGCAATGATCAC+TGG | 0.452560 | 7.4:+21644235 | None:intergenic |
| AAGTCTCATACTTTCCAATT+GGG | 0.455013 | 7.4:-21647237 | MS.gene83843:CDS |
| TTTCTTGAAGTAACTTTCAC+TGG | 0.456582 | 7.4:+21645152 | None:intergenic |
| ATAGTAAGCATAGAAGAGAA+TGG | 0.460134 | 7.4:+21647404 | None:intergenic |
| AGTATGAGAGTATTGGTAAA+GGG | 0.464059 | 7.4:+21647497 | None:intergenic |
| GTCCAAGGCCATGACCCAAT+TGG | 0.469081 | 7.4:+21647223 | None:intergenic |
| CTAGAAACATATCTCTATCA+TGG | 0.469141 | 7.4:+21645289 | None:intergenic |
| GTTAAGTGAGGGGTTGGAGA+AGG | 0.469191 | 7.4:+21647297 | None:intergenic |
| TGTAAGGTATTGGTTAAGTG+AGG | 0.473954 | 7.4:+21647285 | None:intergenic |
| AAAAGGAAGGTCATAATAGT+TGG | 0.482102 | 7.4:+21644222 | None:intergenic |
| ATGGCATTGAATTTCACATC+AGG | 0.483309 | 7.4:+21644889 | None:intergenic |
| TTCACTGGCATAATTGCCAC+CGG | 0.483530 | 7.4:+21645167 | None:intergenic |
| TGATGAACAAACAACTTGAA+TGG | 0.484985 | 7.4:+21644870 | None:intergenic |
| CCACCCCAATCCAGCTCAAA+GGG | 0.486308 | 7.4:-21647180 | MS.gene83843:intron |
| CCCGTTGACTTTGTGGTCCA+AGG | 0.486935 | 7.4:+21647208 | None:intergenic |
| CTATTTGATGAAACAAGGTT+GGG | 0.490527 | 7.4:+21644772 | None:intergenic |
| CAACATGAGTATGAGAGTAT+TGG | 0.492668 | 7.4:+21647490 | None:intergenic |
| TGATTCACAAGTATCCGTAT+TGG | 0.495104 | 7.4:-21644984 | MS.gene83843:CDS |
| AGAGTGGATTGGTGGTTATG+TGG | 0.497762 | 7.4:+21647354 | None:intergenic |
| CCTATTTGATGAAACAAGGT+TGG | 0.500790 | 7.4:+21644771 | None:intergenic |
| CCACCGGTGCGGTTCCAATA+CGG | 0.501589 | 7.4:+21644970 | None:intergenic |
| GTATTGGTTAAGTGAGGGGT+TGG | 0.505320 | 7.4:+21647291 | None:intergenic |
| CATACTTTCCAATTGGGTCA+TGG | 0.508311 | 7.4:-21647231 | MS.gene83843:CDS |
| CAATTCAAAATATCTGCAAA+AGG | 0.508336 | 7.4:+21644205 | None:intergenic |
| ATCATGCCGTAGACTTGCTA+TGG | 0.511496 | 7.4:+21645062 | None:intergenic |
| GTAAGGTATTGGTTAAGTGA+GGG | 0.513043 | 7.4:+21647286 | None:intergenic |
| TGAAGTTAAGAGTGGATTGG+TGG | 0.513765 | 7.4:+21647346 | None:intergenic |
| TGATGATTTGAAGTTAAGAG+TGG | 0.517478 | 7.4:+21647338 | None:intergenic |
| GAGTATTGGTAAAGGGAAGA+AGG | 0.517846 | 7.4:+21647504 | None:intergenic |
| TCGACAAGATTTATCCGTAC+TGG | 0.518253 | 7.4:+21644412 | None:intergenic |
| GAGTATGAGAGTATTGGTAA+AGG | 0.519981 | 7.4:+21647496 | None:intergenic |
| GGTAATAGCACATTTGCAAA+AGG | 0.529147 | 7.4:+21645204 | None:intergenic |
| TTCAATTGGAAGGTCTGCTA+TGG | 0.532886 | 7.4:-21644920 | MS.gene83843:CDS |
| GCCTTGGACCACAAAGTCAA+CGG | 0.533654 | 7.4:-21647209 | MS.gene83843:CDS |
| GCATGATCGTCGAGTTGGTG+TGG | 0.534409 | 7.4:-21645046 | MS.gene83843:CDS |
| GAAGTGAACACAGCACGTAT+TGG | 0.536936 | 7.4:-21644283 | MS.gene83843:CDS |
| GAAGAATGTGTTGAAGGTAA+GGG | 0.537595 | 7.4:-21644086 | MS.gene83843:CDS |
| ATTTGAAGTTAAGAGTGGAT+TGG | 0.541977 | 7.4:+21647343 | None:intergenic |
| TTCTTGGCCAAATTTGTGGT+AGG | 0.544146 | 7.4:+21644806 | None:intergenic |
| ATAAAAGTGATCCGCGCCAC+CGG | 0.547434 | 7.4:+21644954 | None:intergenic |
| ATCAGAATGATTGTTGTGTA+AGG | 0.547521 | 7.4:+21647269 | None:intergenic |
| GAGAAGTGAATTCGCCAGTA+CGG | 0.551348 | 7.4:-21644426 | MS.gene83843:CDS |
| GCTACAGAAGAATGTGTTGA+AGG | 0.551649 | 7.4:-21644092 | MS.gene83843:CDS |
| CCTAATAACTCATCACCGTA+TGG | 0.554944 | 7.4:+21644337 | None:intergenic |
| GGATAAATCTTGTCGAGACA+TGG | 0.555807 | 7.4:-21644405 | MS.gene83843:CDS |
| GCCACCCCAATCCAGCTCAA+AGG | 0.556511 | 7.4:-21647181 | MS.gene83843:CDS |
| TTGGAACCGCACCGGTGGCG+CGG | 0.557524 | 7.4:-21644965 | MS.gene83843:CDS |
| TCAAAATATCTGCAAAAGGA+AGG | 0.557935 | 7.4:+21644209 | None:intergenic |
| TTTGATGAAACAAGGTTGGG+TGG | 0.562781 | 7.4:+21644775 | None:intergenic |
| TACTGGCGAATTCACTTCTC+CGG | 0.566201 | 7.4:+21644429 | None:intergenic |
| CCCTTTGAGCTGGATTGGGG+TGG | 0.566358 | 7.4:+21647180 | None:intergenic |
| CTACGGCATGATCGTCGAGT+TGG | 0.573970 | 7.4:-21645051 | MS.gene83843:CDS |
| ATACCCTTTGAGCTGGATTG+GGG | 0.576758 | 7.4:+21647177 | None:intergenic |
| ACAGAAATCTTTGTTCACAA+TGG | 0.577531 | 7.4:-21644373 | MS.gene83843:CDS |
| CATGATCGTCGAGTTGGTGT+GGG | 0.578419 | 7.4:-21645045 | MS.gene83843:CDS |
| AAATATGGTTAAGAGAGCTA+AGG | 0.581380 | 7.4:+21647428 | None:intergenic |
| CCGTATTGGAACCGCACCGG+TGG | 0.597029 | 7.4:-21644970 | MS.gene83843:CDS |
| TGGCATGTCATTCAATTGGA+AGG | 0.599398 | 7.4:-21644930 | MS.gene83843:CDS |
| GGTACCTATTTGATGAAACA+AGG | 0.607743 | 7.4:+21644767 | None:intergenic |
| TATCCGTATTGGAACCGCAC+CGG | 0.608918 | 7.4:-21644973 | MS.gene83843:CDS |
| TAGAATGCATCAAAGTCAAG+TGG | 0.609625 | 7.4:+21644040 | None:intergenic |
| TAAGGTATTGGTTAAGTGAG+GGG | 0.610496 | 7.4:+21647287 | None:intergenic |
| GATCGTCGAGTTGGTGTGGG+AGG | 0.616478 | 7.4:-21645042 | MS.gene83843:CDS |
| AAGGGAAGAAGGACGAAGCA+TGG | 0.619694 | 7.4:+21647515 | None:intergenic |
| AGTGATCCGCGCCACCGGTG+CGG | 0.629143 | 7.4:+21644959 | None:intergenic |
| ATTGGTGGTTATGTGGACGA+TGG | 0.634173 | 7.4:+21647361 | None:intergenic |
| AATGCATCAAAGTCAAGTGG+AGG | 0.658492 | 7.4:+21644043 | None:intergenic |
| TTACCCGTGAAAACTGAACC+CGG | 0.660789 | 7.4:-21645186 | MS.gene83843:CDS |
| TCACTGGCATAATTGCCACC+GGG | 0.685601 | 7.4:+21645168 | None:intergenic |
| CTTGGACCACAAAGTCAACG+GGG | 0.749981 | 7.4:-21647207 | MS.gene83843:CDS |
| ATGGTGTGTGAAGATGATTG+AGG | 0.755003 | 7.4:+21647380 | None:intergenic |
| CCCGTGAAAACTGAACCCGG+TGG | 0.789625 | 7.4:-21645183 | MS.gene83843:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATAATTAAAATGACA+TGG | - | chr7.4:21645529-21645548 | MS.gene83843:intron | 10.0% |
| !! | ATTGAAATTTAAAAAAGAAT+TGG | + | chr7.4:21645470-21645489 | None:intergenic | 10.0% |
| !!! | AAAAAGTCAAAAAAATATTT+TGG | - | chr7.4:21645358-21645377 | MS.gene83843:CDS | 10.0% |
| !!! | AAAAGTCAAAAAAATATTTT+GGG | - | chr7.4:21645359-21645378 | MS.gene83843:CDS | 10.0% |
| !!! | AAATTAACAATTTTGAAAAT+AGG | - | chr7.4:21645711-21645730 | MS.gene83843:intron | 10.0% |
| !!! | AATTAACAATTTTGAAAATA+GGG | - | chr7.4:21645712-21645731 | MS.gene83843:intron | 10.0% |
| !!! | ATTAATTTAAAATCTAGTTT+TGG | + | chr7.4:21646888-21646907 | None:intergenic | 10.0% |
| !!! | ATTTTTTTGACTTTTTAAAT+AGG | + | chr7.4:21645354-21645373 | None:intergenic | 10.0% |
| !!! | TTAACAATTTTAAAAATAGA+GGG | + | chr7.4:21645292-21645311 | None:intergenic | 10.0% |
| !!! | TTTTTAAAATTGTTAACTTT+TGG | - | chr7.4:21645296-21645315 | MS.gene83843:CDS | 10.0% |
| !!! | TTTTTTTGACTTTTTAAATA+GGG | + | chr7.4:21645353-21645372 | None:intergenic | 10.0% |
| !! | ATATTAGAATAAAATAATGC+AGG | + | chr7.4:21644991-21645010 | None:intergenic | 15.0% |
| !! | TATTAGAATAAAATAATGCA+GGG | + | chr7.4:21644990-21645009 | None:intergenic | 15.0% |
| !! | TTATAAGTAGAGATTATAAT+CGG | - | chr7.4:21645924-21645943 | MS.gene83843:intron | 15.0% |
| !!! | AAAAAGTCAACAAAATATTT+TGG | + | chr7.4:21645647-21645666 | None:intergenic | 15.0% |
| !!! | AATATTGTTGTTTGTTAATA+TGG | - | chr7.4:21644360-21644379 | MS.gene83843:CDS | 15.0% |
| !!! | ACTAGATTTTAAATTAATAG+AGG | - | chr7.4:21646890-21646909 | MS.gene83843:intron | 15.0% |
| !!! | ATTAACAATTTTGAAAATAG+GGG | - | chr7.4:21645713-21645732 | MS.gene83843:intron | 15.0% |
| !!! | ATTGTATATTTTCTTTTTTC+TGG | - | chr7.4:21644945-21644964 | MS.gene83843:CDS | 15.0% |
| !!! | GTTAACAATTTTAAAAATAG+AGG | + | chr7.4:21645293-21645312 | None:intergenic | 15.0% |
| !!! | TCATATTATCATTCATTTTA+AGG | - | chr7.4:21644440-21644459 | MS.gene83843:CDS | 15.0% |
| !!! | TTCTAAATTTTGTTTTTTGA+AGG | - | chr7.4:21645843-21645862 | MS.gene83843:intron | 15.0% |
| !!! | TTTTTTGACTTTTTAAATAG+GGG | + | chr7.4:21645352-21645371 | None:intergenic | 15.0% |
| !! | AATAAAACATGGTAGAAATT+AGG | - | chr7.4:21645070-21645089 | MS.gene83843:CDS | 20.0% |
| !! | ATAAAACATGGTAGAAATTA+GGG | - | chr7.4:21645071-21645090 | MS.gene83843:CDS | 20.0% |
| !! | ATAAGACAAACATAATTATG+TGG | - | chr7.4:21644655-21644674 | MS.gene83843:intron | 20.0% |
| !! | ATATGGTTATGTATGAATTA+TGG | - | chr7.4:21647471-21647490 | MS.gene83843:CDS | 20.0% |
| !! | TACAATATTGCAAACTAAAA+TGG | + | chr7.4:21644931-21644950 | None:intergenic | 20.0% |
| !! | TCGATAAATTTGCATTAAAA+AGG | + | chr7.4:21646044-21646063 | None:intergenic | 20.0% |
| !! | TTATTCTAATATTCCTAGAT+TGG | - | chr7.4:21644999-21645018 | MS.gene83843:CDS | 20.0% |
| !! | TTATTGAAAAAGATTCTGAA+AGG | - | chr7.4:21647347-21647366 | MS.gene83843:CDS | 20.0% |
| !! | TTGTAGACTAAAATAAAACA+TGG | - | chr7.4:21645059-21645078 | MS.gene83843:CDS | 20.0% |
| !!! | AAAAAATCGGTTTTAGAAAT+AGG | + | chr7.4:21645326-21645345 | None:intergenic | 20.0% |
| !!! | AAAAATCGGTTTTAGAAATA+GGG | + | chr7.4:21645325-21645344 | None:intergenic | 20.0% |
| !!! | ATATTTTGGGAATAAAAAGA+TGG | - | chr7.4:21645372-21645391 | MS.gene83843:intron | 20.0% |
| !!! | ATCAACATGTTTTATATCAT+CGG | - | chr7.4:21646809-21646828 | MS.gene83843:intron | 20.0% |
| !!! | GGTATAGAATTTTGAAAAAT+TGG | + | chr7.4:21646023-21646042 | None:intergenic | 20.0% |
| !!! | TATTATCATTCATTTTAAGG+TGG | - | chr7.4:21644443-21644462 | MS.gene83843:CDS | 20.0% |
| !!! | TTAACAATTTTGAAAATAGG+GGG | - | chr7.4:21645714-21645733 | MS.gene83843:intron | 20.0% |
| !!! | TTCAGAATCTTTTTCAATAA+AGG | + | chr7.4:21647347-21647366 | None:intergenic | 20.0% |
| !!! | TTTGAAACTTTCTATTTTGA+TGG | + | chr7.4:21644846-21644865 | None:intergenic | 20.0% |
| ! | AAGAATTGGATTTATTTGAG+TGG | + | chr7.4:21645456-21645475 | None:intergenic | 25.0% |
| ! | AATATTCCTAGATTGGTAAA+TGG | - | chr7.4:21645006-21645025 | MS.gene83843:CDS | 25.0% |
| ! | ACATTTCCAAAAATAGAGAA+AGG | + | chr7.4:21644682-21644701 | None:intergenic | 25.0% |
| ! | ATAGAAGAGAATGGAAAATA+TGG | + | chr7.4:21644079-21644098 | None:intergenic | 25.0% |
| ! | CAATTCAAAATATCTGCAAA+AGG | + | chr7.4:21647287-21647306 | None:intergenic | 25.0% |
| ! | CATTAGTTAAACAATTTCCA+AGG | + | chr7.4:21644574-21644593 | None:intergenic | 25.0% |
| ! | TAAATAGGGGATCAAAAAAT+CGG | + | chr7.4:21645339-21645358 | None:intergenic | 25.0% |
| ! | TAATAAATGTACCTAGAAAG+AGG | + | chr7.4:21646755-21646774 | None:intergenic | 25.0% |
| !! | AAGTTCTATACCTATTGTTT+TGG | - | chr7.4:21647502-21647521 | MS.gene83843:CDS | 25.0% |
| !! | AGTTCTATACCTATTGTTTT+GGG | - | chr7.4:21647503-21647522 | MS.gene83843:CDS | 25.0% |
| !! | ATTGGTGATTCATTATACTA+TGG | - | chr7.4:21647224-21647243 | MS.gene83843:CDS | 25.0% |
| !! | GTTTTTCGTTTATGATACTT+GGG | + | chr7.4:21645420-21645439 | None:intergenic | 25.0% |
| !! | TGTTTTTCGTTTATGATACT+TGG | + | chr7.4:21645421-21645440 | None:intergenic | 25.0% |
| !! | TTGGATCTTTTGTAATGAAA+TGG | + | chr7.4:21646377-21646396 | None:intergenic | 25.0% |
| !!! | AAAAAACCGGTTTTAGAAAT+AGG | - | chr7.4:21645680-21645699 | MS.gene83843:intron | 25.0% |
| !!! | AAAAACCGGTTTTAGAAATA+GGG | - | chr7.4:21645681-21645700 | MS.gene83843:intron | 25.0% |
| !!! | AAAATCGGTTTTAGAAATAG+GGG | + | chr7.4:21645324-21645343 | None:intergenic | 25.0% |
| !!! | AAACTTTCTATTTTGATGGA+AGG | + | chr7.4:21644842-21644861 | None:intergenic | 25.0% |
| !!! | CTCCTATTTTTAATCACTAA+CGG | + | chr7.4:21646923-21646942 | None:intergenic | 25.0% |
| !!! | CTTTTGCAGATATTTTGAAT+TGG | - | chr7.4:21647285-21647304 | MS.gene83843:CDS | 25.0% |
| !!! | TCATCAAGTTATTTCTTAAG+TGG | - | chr7.4:21646636-21646655 | MS.gene83843:intron | 25.0% |
| !!! | TTGTTGACTTTTTAAACAGA+GGG | - | chr7.4:21645654-21645673 | MS.gene83843:intron | 25.0% |
| !!! | TTTGCTTTTGTAAAAATGAC+AGG | - | chr7.4:21647018-21647037 | MS.gene83843:intron | 25.0% |
| !!! | TTTGTTGACTTTTTAAACAG+AGG | - | chr7.4:21645653-21645672 | MS.gene83843:intron | 25.0% |
| !!! | TTTTTTCTGGTAGAAAAAGA+GGG | - | chr7.4:21644958-21644977 | MS.gene83843:CDS | 25.0% |
| AAAAGGAAGGTCATAATAGT+TGG | + | chr7.4:21647270-21647289 | None:intergenic | 30.0% | |
| AAATATGGTTAAGAGAGCTA+AGG | + | chr7.4:21644064-21644083 | None:intergenic | 30.0% | |
| AAGTCTCATACTTTCCAATT+GGG | - | chr7.4:21644252-21644271 | MS.gene83843:CDS | 30.0% | |
| AAGTGGTTATATTGCTCATA+AGG | - | chr7.4:21646653-21646672 | MS.gene83843:intron | 30.0% | |
| AATAAAATAATGCAGGGCTT+TGG | + | chr7.4:21644984-21645003 | None:intergenic | 30.0% | |
| ACAGAAATCTTTGTTCACAA+TGG | - | chr7.4:21647116-21647135 | MS.gene83843:intron | 30.0% | |
| AGTCTACAACCATTTCTTAT+AGG | + | chr7.4:21645048-21645067 | None:intergenic | 30.0% | |
| ATAGTAAGCATAGAAGAGAA+TGG | + | chr7.4:21644088-21644107 | None:intergenic | 30.0% | |
| ATCAGAATGATTGTTGTGTA+AGG | + | chr7.4:21644223-21644242 | None:intergenic | 30.0% | |
| ATGATTGTTGTGTAAGGTAT+TGG | + | chr7.4:21644217-21644236 | None:intergenic | 30.0% | |
| CATAGTCTCTAATGAAATCT+TGG | + | chr7.4:21646476-21646495 | None:intergenic | 30.0% | |
| CGTTAGTGATTAAAAATAGG+AGG | - | chr7.4:21646921-21646940 | MS.gene83843:intron | 30.0% | |
| CTAGAAACATATCTCTATCA+TGG | + | chr7.4:21646203-21646222 | None:intergenic | 30.0% | |
| CTATTTGATGAAACAAGGTT+GGG | + | chr7.4:21646720-21646739 | None:intergenic | 30.0% | |
| CTCCGTTAGTGATTAAAAAT+AGG | - | chr7.4:21646918-21646937 | MS.gene83843:intron | 30.0% | |
| CTTCATGTCATTAATGAACA+TGG | - | chr7.4:21645597-21645616 | MS.gene83843:intron | 30.0% | |
| GTCTACAACCATTTCTTATA+GGG | + | chr7.4:21645047-21645066 | None:intergenic | 30.0% | |
| TCAAAATATCTGCAAAAGGA+AGG | + | chr7.4:21647283-21647302 | None:intergenic | 30.0% | |
| TGACTTTGATGCATTCTATA+TGG | - | chr7.4:21647454-21647473 | MS.gene83843:CDS | 30.0% | |
| TGATGAACAAACAACTTGAA+TGG | + | chr7.4:21646622-21646641 | None:intergenic | 30.0% | |
| TGGTTGTAAAAATGATCTCA+TGG | + | chr7.4:21644533-21644552 | None:intergenic | 30.0% | |
| TGTTAAATGATATGCCATGT+AGG | - | chr7.4:21645560-21645579 | MS.gene83843:intron | 30.0% | |
| TTTCTTGAAGTAACTTTCAC+TGG | + | chr7.4:21646340-21646359 | None:intergenic | 30.0% | |
| ! | AAGTTCTGTTTTCATGTTAG+AGG | - | chr7.4:21647179-21647198 | MS.gene83843:intron | 30.0% |
| ! | ATTTGAAGTTAAGAGTGGAT+TGG | + | chr7.4:21644149-21644168 | None:intergenic | 30.0% |
| ! | GTTTGTTAATATGGTTTGTG+TGG | - | chr7.4:21644369-21644388 | MS.gene83843:CDS | 30.0% |
| ! | TGATGATTTGAAGTTAAGAG+TGG | + | chr7.4:21644154-21644173 | None:intergenic | 30.0% |
| ! | TTTTTAATCACTAACGGAGT+TGG | + | chr7.4:21646917-21646936 | None:intergenic | 30.0% |
| !! | AAGAAAAGATCTGCTTTTGT+TGG | + | chr7.4:21646396-21646415 | None:intergenic | 30.0% |
| !! | AGTATGAGAGTATTGGTAAA+GGG | + | chr7.4:21643995-21644014 | None:intergenic | 30.0% |
| !! | GTTCTATACCTATTGTTTTG+GGG | - | chr7.4:21647504-21647523 | MS.gene83843:CDS | 30.0% |
| !! | TGAGATCATTTTTACAACCA+TGG | - | chr7.4:21644533-21644552 | MS.gene83843:intron | 30.0% |
| !!! | AAAACCGGTTTTAGAAATAG+GGG | - | chr7.4:21645682-21645701 | MS.gene83843:intron | 30.0% |
| !!! | CATATTTTTAGACCCAAAAG+TGG | + | chr7.4:21646855-21646874 | None:intergenic | 30.0% |
| !!! | CTCTATTTTTGGAAATGTTG+TGG | - | chr7.4:21644684-21644703 | MS.gene83843:intron | 30.0% |
| !!! | CTTTTTTCTGGTAGAAAAAG+AGG | - | chr7.4:21644957-21644976 | MS.gene83843:CDS | 30.0% |
| !!! | TTCTATACCTATTGTTTTGG+GGG | - | chr7.4:21647505-21647524 | MS.gene83843:CDS | 30.0% |
| AAACAGAGGGATCAAAAAAC+CGG | - | chr7.4:21645667-21645686 | MS.gene83843:intron | 35.0% | |
| AACCTAACACAGCTGATTAA+TGG | + | chr7.4:21645951-21645970 | None:intergenic | 35.0% | |
| ACATGGCACATTATTTAGAG+AGG | - | chr7.4:21645614-21645633 | MS.gene83843:intron | 35.0% | |
| ACTGACGCAATCTATCTATA+AGG | - | chr7.4:21644882-21644901 | MS.gene83843:CDS | 35.0% | |
| AGAAGAATGTGTTGAAGGTA+AGG | - | chr7.4:21647402-21647421 | MS.gene83843:CDS | 35.0% | |
| ATGTGTAATTGAGATGAAGC+TGG | - | chr7.4:21644795-21644814 | MS.gene83843:CDS | 35.0% | |
| ATGTTGATGTCGAATCAATC+AGG | + | chr7.4:21646797-21646816 | None:intergenic | 35.0% | |
| CAAGTCTCATACTTTCCAAT+TGG | - | chr7.4:21644251-21644270 | MS.gene83843:CDS | 35.0% | |
| CCTATTTGATGAAACAAGGT+TGG | + | chr7.4:21646721-21646740 | None:intergenic | 35.0% | |
| GAAGAATGTGTTGAAGGTAA+GGG | - | chr7.4:21647403-21647422 | MS.gene83843:CDS | 35.0% | |
| GGAAGACTAAAAACACCATA+CGG | - | chr7.4:21647137-21647156 | MS.gene83843:intron | 35.0% | |
| GGTAATAGCACATTTGCAAA+AGG | + | chr7.4:21646288-21646307 | None:intergenic | 35.0% | |
| GGTACCTATTTGATGAAACA+AGG | + | chr7.4:21646725-21646744 | None:intergenic | 35.0% | |
| TAATAGTTGGCAATGATCAC+TGG | + | chr7.4:21647257-21647276 | None:intergenic | 35.0% | |
| TACCATTTCTTCCTCTTTCT+AGG | - | chr7.4:21646741-21646760 | MS.gene83843:intron | 35.0% | |
| TACCTAGAAAGAGGAAGAAA+TGG | + | chr7.4:21646746-21646765 | None:intergenic | 35.0% | |
| TAGAATGCATCAAAGTCAAG+TGG | + | chr7.4:21647452-21647471 | None:intergenic | 35.0% | |
| TATGAATCCCCCAAAACAAT+AGG | + | chr7.4:21647515-21647534 | None:intergenic | 35.0% | |
| TATGTGGCATGTCATTCAAT+TGG | - | chr7.4:21646555-21646574 | MS.gene83843:intron | 35.0% | |
| TGACGGTTCAGGAAAATTTA+AGG | - | chr7.4:21646161-21646180 | MS.gene83843:intron | 35.0% | |
| TGATTCACAAGTATCCGTAT+TGG | - | chr7.4:21646505-21646524 | MS.gene83843:intron | 35.0% | |
| ! | AAAGGATCATCTTTTCTGTG+AGG | + | chr7.4:21646270-21646289 | None:intergenic | 35.0% |
| ! | ATGGCATTGAATTTCACATC+AGG | + | chr7.4:21646603-21646622 | None:intergenic | 35.0% |
| ! | CAACATGAGTATGAGAGTAT+TGG | + | chr7.4:21644002-21644021 | None:intergenic | 35.0% |
| ! | CCAACCTTGTTTCATCAAAT+AGG | - | chr7.4:21646718-21646737 | MS.gene83843:intron | 35.0% |
| ! | CTGAAAGGTATAGTTAGTTC+TGG | - | chr7.4:21647362-21647381 | MS.gene83843:CDS | 35.0% |
| ! | CTTTTTCCATAGCAAGTCTA+CGG | - | chr7.4:21646421-21646440 | MS.gene83843:intron | 35.0% |
| ! | GGAGAAGGAAGAATGAATTT+TGG | + | chr7.4:21644180-21644199 | None:intergenic | 35.0% |
| ! | TCTTTTCTTGGCCAAATTTG+TGG | + | chr7.4:21646690-21646709 | None:intergenic | 35.0% |
| ! | TGTGGACCTTTCTCTATTTT+TGG | - | chr7.4:21644673-21644692 | MS.gene83843:intron | 35.0% |
| ! | TTTTGGCACCCTATAAGAAA+TGG | - | chr7.4:21645036-21645055 | MS.gene83843:CDS | 35.0% |
| !! | AAAAAGCTAGCTTTCTTTGC+CGG | - | chr7.4:21647041-21647060 | MS.gene83843:intron | 35.0% |
| !! | GAGTATGAGAGTATTGGTAA+AGG | + | chr7.4:21643996-21644015 | None:intergenic | 35.0% |
| !! | GATACCCCTATTTCTAAAAC+CGG | + | chr7.4:21645689-21645708 | None:intergenic | 35.0% |
| !! | GTAAGGTATTGGTTAAGTGA+GGG | + | chr7.4:21644206-21644225 | None:intergenic | 35.0% |
| !! | TAAGGTATTGGTTAAGTGAG+GGG | + | chr7.4:21644205-21644224 | None:intergenic | 35.0% |
| !! | TGTAAGGTATTGGTTAAGTG+AGG | + | chr7.4:21644207-21644226 | None:intergenic | 35.0% |
| !! | TTGGGTGGATTTTCTTTTCT+TGG | + | chr7.4:21646702-21646721 | None:intergenic | 35.0% |
| !!! | CACGAAAACTCTGTTTTTGA+CGG | - | chr7.4:21646144-21646163 | MS.gene83843:intron | 35.0% |
| !!! | CATTTTAAGGTGGCTTTTGT+TGG | - | chr7.4:21644453-21644472 | MS.gene83843:intron | 35.0% |
| AATGCATCAAAGTCAAGTGG+AGG | + | chr7.4:21647449-21647468 | None:intergenic | 40.0% | |
| ATGCATGCCTACCACAAATT+TGG | - | chr7.4:21646676-21646695 | MS.gene83843:intron | 40.0% | |
| ATGGTGTGTGAAGATGATTG+AGG | + | chr7.4:21644112-21644131 | None:intergenic | 40.0% | |
| ATTGAGATGAAGCTGGCATT+AGG | - | chr7.4:21644802-21644821 | MS.gene83843:CDS | 40.0% | |
| CATACTTTCCAATTGGGTCA+TGG | - | chr7.4:21644258-21644277 | MS.gene83843:CDS | 40.0% | |
| CCATACGGTGATGAGTTATT+AGG | - | chr7.4:21647152-21647171 | MS.gene83843:intron | 40.0% | |
| CCTAATAACTCATCACCGTA+TGG | + | chr7.4:21647155-21647174 | None:intergenic | 40.0% | |
| CTTATGTGACATTGCCTACA+TGG | + | chr7.4:21645577-21645596 | None:intergenic | 40.0% | |
| GCTACAGAAGAATGTGTTGA+AGG | - | chr7.4:21647397-21647416 | MS.gene83843:CDS | 40.0% | |
| GGATAAATCTTGTCGAGACA+TGG | - | chr7.4:21647084-21647103 | MS.gene83843:intron | 40.0% | |
| GTCCATTAATCAGCTGTGTT+AGG | - | chr7.4:21645946-21645965 | MS.gene83843:intron | 40.0% | |
| GTTAAGAGAGCTAAGGTAGT+TGG | + | chr7.4:21644057-21644076 | None:intergenic | 40.0% | |
| TCGACAAGATTTATCCGTAC+TGG | + | chr7.4:21647080-21647099 | None:intergenic | 40.0% | |
| TGGCATGTCATTCAATTGGA+AGG | - | chr7.4:21646559-21646578 | MS.gene83843:intron | 40.0% | |
| TTCAATTGGAAGGTCTGCTA+TGG | - | chr7.4:21646569-21646588 | MS.gene83843:intron | 40.0% | |
| TTCTTGGCCAAATTTGTGGT+AGG | + | chr7.4:21646686-21646705 | None:intergenic | 40.0% | |
| TTGAGATGAAGCTGGCATTA+GGG | - | chr7.4:21644803-21644822 | MS.gene83843:CDS | 40.0% | |
| TTGATGTCGAATCAATCAGG+TGG | + | chr7.4:21646794-21646813 | None:intergenic | 40.0% | |
| TTTAGACCCAAAAGTGGTGA+TGG | + | chr7.4:21646849-21646868 | None:intergenic | 40.0% | |
| TTTGATGAAACAAGGTTGGG+TGG | + | chr7.4:21646717-21646736 | None:intergenic | 40.0% | |
| ! | AACTTGACCATCACCACTTT+TGG | - | chr7.4:21646839-21646858 | MS.gene83843:intron | 40.0% |
| ! | ATTTTGCATACCCTTTGAGC+TGG | + | chr7.4:21644322-21644341 | None:intergenic | 40.0% |
| ! | TCGAATCAATCAGGTGGATT+AGG | + | chr7.4:21646788-21646807 | None:intergenic | 40.0% |
| !! | ACTTGACCATCACCACTTTT+GGG | - | chr7.4:21646840-21646859 | MS.gene83843:intron | 40.0% |
| !! | CGTAGACTTGCTATGGAAAA+AGG | + | chr7.4:21646423-21646442 | None:intergenic | 40.0% |
| !! | GAGTATTGGTAAAGGGAAGA+AGG | + | chr7.4:21643988-21644007 | None:intergenic | 40.0% |
| !! | GCACATGTTTTTGTCATTGC+AGG | - | chr7.4:21646111-21646130 | MS.gene83843:intron | 40.0% |
| !! | TGAAGTTAAGAGTGGATTGG+TGG | + | chr7.4:21644146-21644165 | None:intergenic | 40.0% |
| !!! | AACTCTGTTTTTGACGGTTC+AGG | - | chr7.4:21646150-21646169 | MS.gene83843:intron | 40.0% |
| !!! | AGGTAAGGGAGCATTTTCAA+TGG | - | chr7.4:21647417-21647436 | MS.gene83843:CDS | 40.0% |
| ATACCCTTTGAGCTGGATTG+GGG | + | chr7.4:21644315-21644334 | None:intergenic | 45.0% | |
| CATACCCTTTGAGCTGGATT+GGG | + | chr7.4:21644316-21644335 | None:intergenic | 45.0% | |
| CGTGAGCCATTTACCAATCT+AGG | + | chr7.4:21645015-21645034 | None:intergenic | 45.0% | |
| GAAGTGAACACAGCACGTAT+TGG | - | chr7.4:21647206-21647225 | MS.gene83843:CDS | 45.0% | |
| GAGAAGTGAATTCGCCAGTA+CGG | - | chr7.4:21647063-21647082 | MS.gene83843:intron | 45.0% | |
| TACTGGCGAATTCACTTCTC+CGG | + | chr7.4:21647063-21647082 | None:intergenic | 45.0% | |
| TTACCCGTGAAAACTGAACC+CGG | - | chr7.4:21646303-21646322 | MS.gene83843:intron | 45.0% | |
| TTCACTGGCATAATTGCCAC+CGG | + | chr7.4:21646325-21646344 | None:intergenic | 45.0% | |
| ! | ATTGGTGGTTATGTGGACGA+TGG | + | chr7.4:21644131-21644150 | None:intergenic | 45.0% |
| ! | TGGTAAATGGCTCACGCTTT+TGG | - | chr7.4:21645019-21645038 | MS.gene83843:CDS | 45.0% |
| !! | AGAGTGGATTGGTGGTTATG+TGG | + | chr7.4:21644138-21644157 | None:intergenic | 45.0% |
| !! | ATCATGCCGTAGACTTGCTA+TGG | + | chr7.4:21646430-21646449 | None:intergenic | 45.0% |
| !! | GTATTGGTTAAGTGAGGGGT+TGG | + | chr7.4:21644201-21644220 | None:intergenic | 45.0% |
| ATAAAAGTGATCCGCGCCAC+CGG | + | chr7.4:21646538-21646557 | None:intergenic | 50.0% | |
| CCTTGGACCACAAAGTCAAC+GGG | - | chr7.4:21644281-21644300 | MS.gene83843:CDS | 50.0% | |
| CTTGGACCACAAAGTCAACG+GGG | - | chr7.4:21644282-21644301 | MS.gene83843:CDS | 50.0% | |
| GCATACCCTTTGAGCTGGAT+TGG | + | chr7.4:21644317-21644336 | None:intergenic | 50.0% | |
| GCCTTGGACCACAAAGTCAA+CGG | - | chr7.4:21644280-21644299 | MS.gene83843:CDS | 50.0% | |
| GGCATGCTGTTGTTGAACCT+TGG | - | chr7.4:21644554-21644573 | MS.gene83843:intron | 50.0% | |
| GGTTCAACAACAGCATGCCA+TGG | + | chr7.4:21644553-21644572 | None:intergenic | 50.0% | |
| GTTAAGTGAGGGGTTGGAGA+AGG | + | chr7.4:21644195-21644214 | None:intergenic | 50.0% | |
| TATCCGTATTGGAACCGCAC+CGG | - | chr7.4:21646516-21646535 | MS.gene83843:intron | 50.0% | |
| TCACTGGCATAATTGCCACC+GGG | + | chr7.4:21646324-21646343 | None:intergenic | 50.0% | |
| TTCCAATTGGGTCATGGCCT+TGG | - | chr7.4:21644264-21644283 | MS.gene83843:CDS | 50.0% | |
| !! | CATGATCGTCGAGTTGGTGT+GGG | - | chr7.4:21646444-21646463 | MS.gene83843:intron | 50.0% |
| !! | TGGCGCGGATCACTTTTATG+TGG | - | chr7.4:21646539-21646558 | MS.gene83843:intron | 50.0% |
| CCACCCCAATCCAGCTCAAA+GGG | - | chr7.4:21644309-21644328 | MS.gene83843:CDS | 55.0% | |
| CTACGGCATGATCGTCGAGT+TGG | - | chr7.4:21646438-21646457 | MS.gene83843:intron | 55.0% | |
| GTCCAAGGCCATGACCCAAT+TGG | + | chr7.4:21644269-21644288 | None:intergenic | 55.0% | |
| ! | CCACCGGGTTCAGTTTTCAC+GGG | + | chr7.4:21646309-21646328 | None:intergenic | 55.0% |
| ! | GCCACCGGGTTCAGTTTTCA+CGG | + | chr7.4:21646310-21646329 | None:intergenic | 55.0% |
| !! | CCCGTTGACTTTGTGGTCCA+AGG | + | chr7.4:21644284-21644303 | None:intergenic | 55.0% |
| !! | GCATGATCGTCGAGTTGGTG+TGG | - | chr7.4:21646443-21646462 | MS.gene83843:intron | 55.0% |
| !! | GGCAAACCCCGTTGACTTTG+TGG | + | chr7.4:21644291-21644310 | None:intergenic | 55.0% |
| CCACCGGTGCGGTTCCAATA+CGG | + | chr7.4:21646522-21646541 | None:intergenic | 60.0% | |
| CCCGTGAAAACTGAACCCGG+TGG | - | chr7.4:21646306-21646325 | MS.gene83843:intron | 60.0% | |
| GCCACCCCAATCCAGCTCAA+AGG | - | chr7.4:21644308-21644327 | MS.gene83843:CDS | 60.0% | |
| ! | CCCTTTGAGCTGGATTGGGG+TGG | + | chr7.4:21644312-21644331 | None:intergenic | 60.0% |
| !! | GATCGTCGAGTTGGTGTGGG+AGG | - | chr7.4:21646447-21646466 | MS.gene83843:intron | 60.0% |
| CCGTATTGGAACCGCACCGG+TGG | - | chr7.4:21646519-21646538 | MS.gene83843:intron | 65.0% | |
| AGTGATCCGCGCCACCGGTG+CGG | + | chr7.4:21646533-21646552 | None:intergenic | 70.0% | |
| ! | TTGGAACCGCACCGGTGGCG+CGG | - | chr7.4:21646524-21646543 | MS.gene83843:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 21643976 | 21647535 | 21643976 | ID=MS.gene83843 |
| chr7.4 | mRNA | 21643976 | 21647535 | 21643976 | ID=MS.gene83843.t1;Parent=MS.gene83843 |
| chr7.4 | exon | 21647181 | 21647535 | 21647181 | ID=MS.gene83843.t1.exon1;Parent=MS.gene83843.t1 |
| chr7.4 | CDS | 21647181 | 21647535 | 21647181 | ID=cds.MS.gene83843.t1;Parent=MS.gene83843.t1 |
| chr7.4 | exon | 21644772 | 21645378 | 21644772 | ID=MS.gene83843.t1.exon2;Parent=MS.gene83843.t1 |
| chr7.4 | CDS | 21644772 | 21645378 | 21644772 | ID=cds.MS.gene83843.t1;Parent=MS.gene83843.t1 |
| chr7.4 | exon | 21643976 | 21644471 | 21643976 | ID=MS.gene83843.t1.exon3;Parent=MS.gene83843.t1 |
| chr7.4 | CDS | 21643976 | 21644471 | 21643976 | ID=cds.MS.gene83843.t1;Parent=MS.gene83843.t1 |
| Gene Sequence |
| Protein sequence |
