AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016377.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016377.01.T01 MTR_3g088440 93.130 524 9 3 16 523 19 531 0.0 974
MsG0380016377.01.T01 MTR_3g088460 78.244 524 83 4 20 523 26 538 0.0 804
MsG0380016377.01.T01 MTR_3g088440 91.169 385 7 3 16 384 19 392 0.0 692
MsG0380016377.01.T01 MTR_3g088460 75.827 393 64 4 20 392 26 407 0.0 595
MsG0380016377.01.T01 MTR_2g104990 56.023 523 195 6 20 523 56 562 0.0 585
MsG0380016377.01.T01 MTR_2g104990 56.023 523 195 6 20 523 31 537 0.0 584
MsG0380016377.01.T01 MTR_5g016270 40.129 466 228 11 31 472 52 490 4.54e-94 296
MsG0380016377.01.T01 MTR_3g102620 39.914 466 229 11 31 472 66 504 1.41e-93 295
MsG0380016377.01.T01 MTR_4g095075 39.712 486 235 12 24 478 39 497 1.50e-92 292
MsG0380016377.01.T01 MTR_8g028050 35.845 491 259 11 11 472 58 521 8.04e-83 268
MsG0380016377.01.T01 MTR_4g094602 76.224 143 31 1 197 336 1 143 6.88e-70 220
MsG0380016377.01.T01 MTR_0041s0030 25.118 422 261 14 33 433 31 418 4.76e-26 113
MsG0380016377.01.T01 MTR_2g062640 25.788 349 231 12 93 433 22 350 4.62e-20 93.2
MsG0380016377.01.T01 MTR_2g062640 23.861 373 216 11 66 433 9 318 1.53e-18 88.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016377.01.T01 AT1G15960 56.788 523 180 8 22 523 21 518 0.0 579
MsG0380016377.01.T01 AT1G80830 56.667 510 189 4 26 519 38 531 0.0 573
MsG0380016377.01.T01 AT1G80830 56.667 510 189 4 26 519 38 531 0.0 573
MsG0380016377.01.T01 AT1G47240 38.413 479 244 11 18 472 52 503 3.18e-94 297
MsG0380016377.01.T01 AT5G67330 39.916 476 237 12 26 478 44 493 3.71e-94 296
MsG0380016377.01.T01 AT4G18790 36.917 493 256 12 8 472 40 505 2.11e-92 292
MsG0380016377.01.T01 AT2G23150 40.835 431 212 9 31 437 53 464 8.41e-91 287
MsG0380016377.01.T01 AT5G03280 26.316 418 272 11 32 433 16 413 9.62e-29 121

Find 116 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCATCATTGGTGGTTCTTC+TGG 0.206134 3:-82660660 MsG0380016377.01.T01:CDS
AGCCGATGCTATTGCCCTTT+TGG 0.215573 3:-82661683 MsG0380016377.01.T01:CDS
TACTATTCAACATCCCATTA+TGG 0.239108 3:-82662841 MsG0380016377.01.T01:CDS
AAGCAATACTTCACAAATAA+TGG 0.285217 3:+82663074 None:intergenic
TAGCAGCAGCACAACCAAAA+TGG 0.288834 3:-82660463 MsG0380016377.01.T01:CDS
AAGGAAAGAAGCGGAGTTAA+GGG 0.309653 3:+82661097 None:intergenic
AAGCAGTGCTATGGCATAAA+TGG 0.318535 3:+82660902 None:intergenic
ATTCTTGTGAGGTCCCATTT+TGG 0.321502 3:+82660449 None:intergenic
TATTTGTGAAGTATTGCTTA+TGG 0.321986 3:-82663070 MsG0380016377.01.T01:CDS
TTGATGCCTCTCACAGAATT+AGG 0.325074 3:+82661441 None:intergenic
CCCAGCTTCTGGTGTACTTA+AGG 0.325720 3:-82661743 MsG0380016377.01.T01:CDS
GGCTCCTTCACCAGCCAGTT+TGG 0.327974 3:+82661708 None:intergenic
AAACTTAAGGAGTGGAATTA+AGG 0.328480 3:+82660485 None:intergenic
GAGAGTTACTTACTGTTTCC+AGG 0.331655 3:+82664012 None:intergenic
CAGTCATTGGCTGCAAATCT+TGG 0.336265 3:-82663442 MsG0380016377.01.T01:CDS
ATGCAAAACCAAGTGGAAAA+AGG 0.336749 3:-82660089 MsG0380016377.01.T01:CDS
TCAGCTAAATCTTCTCTATA+AGG 0.339264 3:+82660029 None:intergenic
AGTCTTGCTGTTGCCATCAT+TGG 0.340050 3:-82660672 MsG0380016377.01.T01:CDS
TAGCCTTGGATCCTTTATTC+TGG 0.340489 3:+82659996 None:intergenic
GAAGGAAAGAAGCGGAGTTA+AGG 0.344893 3:+82661096 None:intergenic
AACAGAACTCCTGCCCATAA+TGG 0.347335 3:+82662827 None:intergenic
TGCTCTGCCAATGACCTATC+TGG 0.350602 3:-82661149 MsG0380016377.01.T01:CDS
AGAAAACCAGGGCCTATATA+TGG 0.355996 3:+82664057 None:intergenic
ATCTCATGGATACTAGGTTT+TGG 0.367043 3:-82660311 MsG0380016377.01.T01:CDS
CCAGCTTCTGGTGTACTTAA+GGG 0.377926 3:-82661742 MsG0380016377.01.T01:CDS
GCAATATAAACTGCCATTAG+AGG 0.379665 3:+82660182 None:intergenic
GCTCCTTCACCAGCCAGTTT+GGG 0.383361 3:+82661709 None:intergenic
ATGAACACATTTGCCACCTT+TGG 0.395316 3:+82660221 None:intergenic
AAATATAAATCACCACCTTC+AGG 0.395323 3:+82663011 None:intergenic
ACAGAACTCCTGCCCATAAT+GGG 0.402615 3:+82662828 None:intergenic
GATTATAGTGTTTCCTCTAA+TGG 0.404806 3:-82660195 MsG0380016377.01.T01:CDS
ATATCCCGCTACCAGAATAA+AGG 0.421458 3:-82660007 None:intergenic
AAGGTGGCAAATGTGTTCAT+TGG 0.426629 3:-82660218 MsG0380016377.01.T01:CDS
AGAAAGTATACGGCATGATA+AGG 0.426875 3:+82661656 None:intergenic
ATTACAATCTCATGGATACT+AGG 0.429574 3:-82660317 MsG0380016377.01.T01:CDS
ACTATTCAACATCCCATTAT+GGG 0.435828 3:-82662840 MsG0380016377.01.T01:CDS
AAACCGATGCGATGATGATA+AGG 0.436840 3:+82660628 None:intergenic
ACTTACTGTTTCCAGGATCA+AGG 0.437998 3:+82664019 None:intergenic
TTGTGCTGCTGCTAAACTTA+AGG 0.438674 3:+82660472 None:intergenic
AGGTGGCAAATGTGTTCATT+GGG 0.438921 3:-82660217 MsG0380016377.01.T01:CDS
TCTTTGGCTTACCTTGATCC+TGG 0.439561 3:-82664030 MsG0380016377.01.T01:CDS
TATAGGGTTTCTTAGACATA+AGG 0.440552 3:-82660746 MsG0380016377.01.T01:intron
CTCCGCTTCTTTCCTTCTCA+AGG 0.452971 3:-82661090 MsG0380016377.01.T01:intron
AGCAGCAGCACAACCAAAAT+GGG 0.460120 3:-82660462 MsG0380016377.01.T01:CDS
TGGGCAGGAGTTCTGTTGAC+TGG 0.463210 3:-82662821 MsG0380016377.01.T01:CDS
AAGTACCTCGTCATGATTTG+AGG 0.466681 3:+82664263 None:intergenic
CCCTTAAGTACACCAGAAGC+TGG 0.474697 3:+82661742 None:intergenic
GAAAGTATACGGCATGATAA+GGG 0.476396 3:+82661657 None:intergenic
GTGGAAACTGATTTGCAAGC+TGG 0.476839 3:-82663683 MsG0380016377.01.T01:CDS
GCCATAGCACTGCTTGCCTC+AGG 0.483626 3:-82660894 MsG0380016377.01.T01:CDS
CTTGCTGTTGCCATCATTGG+TGG 0.486524 3:-82660669 MsG0380016377.01.T01:CDS
GCCAGAAGAACCACCAATGA+TGG 0.490481 3:+82660659 None:intergenic
TAGACATAAGGATGAAAAGA+TGG 0.495109 3:-82660734 MsG0380016377.01.T01:CDS
GAGTGGATTCGCTTTGTTTG+TGG 0.496012 3:-82661216 MsG0380016377.01.T01:CDS
GGGAATGTTTGTGCCCAAAC+TGG 0.496192 3:-82661722 MsG0380016377.01.T01:CDS
TAAGGATGAAAAGATGGAAA+AGG 0.497031 3:-82660728 MsG0380016377.01.T01:CDS
CCCCAAAAGGGCAATAGCAT+CGG 0.499242 3:+82661681 None:intergenic
TGGATCCTTTATTCTGGTAG+CGG 0.502929 3:+82660002 None:intergenic
ACAACAACAACATCAAGTTA+TGG 0.503391 3:-82664292 MsG0380016377.01.T01:CDS
AACAATCCTAGTATTTGTAA+TGG 0.508316 3:-82661803 MsG0380016377.01.T01:CDS
GGATCCTTTATTCTGGTAGC+GGG 0.510528 3:+82660003 None:intergenic
TGCAGGTCATTACAATCTCA+TGG 0.512529 3:-82660325 MsG0380016377.01.T01:intron
TCCTGAGGCAAGCAGTGCTA+TGG 0.526104 3:+82660893 None:intergenic
CCTTAAGTACACCAGAAGCT+GGG 0.527484 3:+82661743 None:intergenic
TGTTGCAATGATTTCTGTGT+CGG 0.531965 3:-82661180 MsG0380016377.01.T01:CDS
ACTTGATTGTGACAGTGATT+GGG 0.532187 3:-82662883 MsG0380016377.01.T01:intron
GTTGCAATGATTTCTGTGTC+GGG 0.533159 3:-82661179 MsG0380016377.01.T01:CDS
GCCAAAGAAACAAGAAAACC+AGG 0.535144 3:+82664045 None:intergenic
ATTGTCTCCAGATAGGTCAT+TGG 0.535156 3:+82661142 None:intergenic
TCAGTACTGCCTTTGTGAAG+TGG 0.535986 3:-82660262 MsG0380016377.01.T01:CDS
ACTTGTATGTAGAATGTGTT+GGG 0.538453 3:-82660939 MsG0380016377.01.T01:intron
CAACTTTACATACTTCTGAA+AGG 0.539753 3:+82663102 None:intergenic
TTCAACATCCCATTATGGGC+AGG 0.543459 3:-82662836 MsG0380016377.01.T01:CDS
GCAAATCTTGGCGTAACCAC+CGG 0.550727 3:-82663430 MsG0380016377.01.T01:CDS
ACCATCACAGGAACTTATGC+AGG 0.551377 3:-82660861 MsG0380016377.01.T01:CDS
GTTCAACATTGTCTCCAGAT+AGG 0.551581 3:+82661135 None:intergenic
TTAAATTAGGAACCTTGAGA+AGG 0.552918 3:+82661078 None:intergenic
ATGTTTGTGCCCAAACTGGC+TGG 0.553195 3:-82661718 MsG0380016377.01.T01:CDS
TTGCTTATGGTTATTAGCAG+AGG 0.558459 3:-82663057 MsG0380016377.01.T01:CDS
AACAGCAAGACTAGGTGCTA+TGG 0.561217 3:+82660683 None:intergenic
AAGCGAATCCACTCTCATAG+AGG 0.564674 3:+82661225 None:intergenic
ATGCAGCCATTACAAATACT+AGG 0.564740 3:+82661797 None:intergenic
TTTGAGTCTGCAGAGGTTTG+GGG 0.565267 3:-82662780 MsG0380016377.01.T01:intron
AAGGGCAATAGCATCGGCTA+CGG 0.568499 3:+82661687 None:intergenic
AGGAGTGGAATTAAGGCGAA+TGG 0.571377 3:+82660492 None:intergenic
GGACAAAGTTCTACCATCAC+AGG 0.573167 3:-82660873 MsG0380016377.01.T01:CDS
CTTAAGTACACCAGAAGCTG+GGG 0.583089 3:+82661744 None:intergenic
TGCAGGACAGTACATCATGC+AGG 0.588205 3:-82660844 MsG0380016377.01.T01:intron
GTGCCCAAACTGGCTGGTGA+AGG 0.595265 3:-82661712 MsG0380016377.01.T01:CDS
AACTTGTATGTAGAATGTGT+TGG 0.595481 3:-82660940 MsG0380016377.01.T01:intron
AGATATTTCCTCTATGAGAG+TGG 0.600417 3:-82661233 MsG0380016377.01.T01:CDS
AAAGTACCTAATTCTGTGAG+AGG 0.602100 3:-82661447 MsG0380016377.01.T01:CDS
TCGCCTTATCATCATCGCAT+CGG 0.604941 3:-82660631 MsG0380016377.01.T01:intron
ATGATGGCAACAGCAAGACT+AGG 0.605747 3:+82660675 None:intergenic
ACATAGTAGTCTACCAAAGG+TGG 0.621719 3:-82660234 MsG0380016377.01.T01:CDS
TCCTGCATAAGTTCCTGTGA+TGG 0.622524 3:+82660860 None:intergenic
TACAGTAATGCAAAACCAAG+TGG 0.623131 3:-82660096 MsG0380016377.01.T01:CDS
AATCTTCTCTATAAGGAACA+TGG 0.634971 3:+82660036 None:intergenic
AATACATAGTAGTCTACCAA+AGG 0.639513 3:-82660237 MsG0380016377.01.T01:CDS
AACCTTGAGAAGGAAAGAAG+CGG 0.643227 3:+82661088 None:intergenic
ATAGCACAAGAGCAGAGTGG+AGG 0.661177 3:+82661475 None:intergenic
ATAGCAGCTGACATACCTGA+AGG 0.665156 3:-82663026 MsG0380016377.01.T01:CDS
TGGAGCTAACCACGGATACG+AGG 0.667237 3:-82663663 MsG0380016377.01.T01:intron
CCAAAGAAACAAGAAAACCA+GGG 0.671441 3:+82664046 None:intergenic
CTGCTGCTAAACTTAAGGAG+TGG 0.674326 3:+82660477 None:intergenic
TAGATAGCACAAGAGCAGAG+TGG 0.681480 3:+82661472 None:intergenic
GAATAGTATGTTGAGAGCAA+AGG 0.682866 3:+82662856 None:intergenic
TTGCAAGCTGGAGCTAACCA+CGG 0.687380 3:-82663671 MsG0380016377.01.T01:CDS
GCAGCTGACATACCTGAAGG+TGG 0.689194 3:-82663023 MsG0380016377.01.T01:intron
ACAATAATAGAATTCTTGTG+AGG 0.689916 3:+82660438 None:intergenic
GAAGGTAAGGTAGATAACTG+AGG 0.700238 3:+82660160 None:intergenic
TTAAGTACACCAGAAGCTGG+GGG 0.708850 3:+82661745 None:intergenic
ATGTATTATCCACTTCACAA+AGG 0.714900 3:+82660253 None:intergenic
GATGGTAGAACTTTGTCCTG+AGG 0.715483 3:+82660878 None:intergenic
AACATCCTCAAATCATGACG+AGG 0.727935 3:-82664268 MsG0380016377.01.T01:intron
ACTTCACAAAGGCAGTACTG+AGG 0.732634 3:+82660264 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTTAAATTTCTTATTATA+AGG + Chr3:82661124-82661143 None:intergenic 10.0%
!! TTGAAATTCAAAATATAATT+TGG + Chr3:82662218-82662237 None:intergenic 10.0%
!!! AAATTTAAGTTATAAATGAA+AGG - Chr3:82661133-82661152 MsG0380016377.01.T01:CDS 10.0%
!!! ATTTATTTTATATAGTTTAG+GGG + Chr3:82660420-82660439 None:intergenic 10.0%
!!! GTATTTATTTTATATAGTTT+AGG + Chr3:82660422-82660441 None:intergenic 10.0%
!! AATTCAAAATATAATTTGGT+AGG + Chr3:82662214-82662233 None:intergenic 15.0%
!! GAAATTAATAAATTTAGCTA+TGG - Chr3:82662927-82662946 MsG0380016377.01.T01:intron 15.0%
!! TCAAAATTACATAAATTGTA+GGG + Chr3:82662308-82662327 None:intergenic 15.0%
!! TTCAAAATTACATAAATTGT+AGG + Chr3:82662309-82662328 None:intergenic 15.0%
!!! TTTTATTATTTATATTTGGC+AGG - Chr3:82661200-82661219 MsG0380016377.01.T01:CDS 15.0%
!! AAATTTATTAATTTCCTGAG+TGG + Chr3:82662922-82662941 None:intergenic 20.0%
!! ATGTAACATATGTAATCTTA+AGG + Chr3:82662468-82662487 None:intergenic 20.0%
!! CAAAATTACATAAATTGTAG+GGG + Chr3:82662307-82662326 None:intergenic 20.0%
!! GAAAACTTGAATAAATTAGA+AGG + Chr3:82660114-82660133 None:intergenic 20.0%
!! TACATAAAGATAGTAATAGT+GGG + Chr3:82661885-82661904 None:intergenic 20.0%
!! TACTAGTAGTGAATTAAATT+AGG + Chr3:82663269-82663288 None:intergenic 20.0%
!! TACTATTGTTAAAAGAAACT+AGG + Chr3:82660182-82660201 None:intergenic 20.0%
!! TAGTATATAATAAGTTGCTA+TGG - Chr3:82663284-82663303 MsG0380016377.01.T01:intron 20.0%
!! TATAACAAAATGTTAGAAGA+AGG + Chr3:82660779-82660798 None:intergenic 20.0%
!! TGTAACATATGTAATCTTAA+GGG + Chr3:82662467-82662486 None:intergenic 20.0%
!! TTACATAAAGATAGTAATAG+TGG + Chr3:82661886-82661905 None:intergenic 20.0%
!! TTTACTGAATTTAGATTGTT+TGG - Chr3:82663555-82663574 MsG0380016377.01.T01:intron 20.0%
!!! ATATAGGAAAAGAAAGTATA+CGG + Chr3:82662688-82662707 None:intergenic 20.0%
!!! ATCCTTGATTTTTATTTGAA+TGG - Chr3:82661977-82661996 MsG0380016377.01.T01:intron 20.0%
!!! TACTGTATGATATAAACTTT+TGG + Chr3:82662775-82662794 None:intergenic 20.0%
!!! TCTTGTATATATACATGTTT+TGG - Chr3:82660137-82660156 MsG0380016377.01.T01:CDS 20.0%
!!! TTGAATTAGTTTGATTGAAA+AGG + Chr3:82661374-82661393 None:intergenic 20.0%
! AAAAGGACAAAAATACAAGA+CGG + Chr3:82661357-82661376 None:intergenic 25.0%
! AACAATCCTAGTATTTGTAA+TGG - Chr3:82662528-82662547 MsG0380016377.01.T01:intron 25.0%
! AAGCAATACTTCACAAATAA+TGG + Chr3:82661260-82661279 None:intergenic 25.0%
! ACAATAATAGAATTCTTGTG+AGG + Chr3:82663896-82663915 None:intergenic 25.0%
! AGTCCATGCTATTAAAATAT+TGG + Chr3:82660512-82660531 None:intergenic 25.0%
! ATTAAAGTAGTAAAAGTCCA+GGG + Chr3:82662039-82662058 None:intergenic 25.0%
! ATTGATGAATGCTATAGTTT+AGG - Chr3:82660534-82660553 MsG0380016377.01.T01:intron 25.0%
! GTCCATGCTATTAAAATATT+GGG + Chr3:82660511-82660530 None:intergenic 25.0%
! TAGAAGTTAAATGTGCAATT+AGG + Chr3:82662992-82663011 None:intergenic 25.0%
! TCAAAATATAATTTGGTAGG+AGG + Chr3:82662211-82662230 None:intergenic 25.0%
! TCCATGCTATTAAAATATTG+GGG + Chr3:82660510-82660529 None:intergenic 25.0%
! TGCCATTCAAATAAAAATCA+AGG + Chr3:82661982-82662001 None:intergenic 25.0%
! TTAGAAAAATTCAAGTCTCA+TGG - Chr3:82660931-82660950 MsG0380016377.01.T01:intron 25.0%
! TTGATGAATGCTATAGTTTA+GGG - Chr3:82660535-82660554 MsG0380016377.01.T01:intron 25.0%
!! AGAAAGTTTTTGCCATATAT+AGG - Chr3:82660262-82660281 MsG0380016377.01.T01:CDS 25.0%
!! CTATTTAACGATTTTGTTGA+AGG - Chr3:82663531-82663550 MsG0380016377.01.T01:intron 25.0%
!! CTTTTAGATTTCATTTGTCA+TGG - Chr3:82661679-82661698 MsG0380016377.01.T01:CDS 25.0%
!! GAATTTTTCTAAATACTCAC+CGG + Chr3:82660923-82660942 None:intergenic 25.0%
!! TTTAACTTCTATGTAGACAT+TGG - Chr3:82663001-82663020 MsG0380016377.01.T01:intron 25.0%
!!! TAATGATGGACAAGTTATAT+AGG + Chr3:82662704-82662723 None:intergenic 25.0%
!!! TATTTGTGAAGTATTGCTTA+TGG - Chr3:82661261-82661280 MsG0380016377.01.T01:intron 25.0%
!!! TTTTTTTAATCTTAACCCTC+CGG + Chr3:82661830-82661849 None:intergenic 25.0%
AAACTTAAGGAGTGGAATTA+AGG + Chr3:82663849-82663868 None:intergenic 30.0%
AAATATAAATCACCACCTTC+AGG + Chr3:82661323-82661342 None:intergenic 30.0%
AACAAAATGTTAGAAGAAGG+AGG + Chr3:82660776-82660795 None:intergenic 30.0%
AACTTGTATGTAGAATGTGT+TGG - Chr3:82663391-82663410 MsG0380016377.01.T01:intron 30.0%
AATACATAGTAGTCTACCAA+AGG - Chr3:82664094-82664113 MsG0380016377.01.T01:intron 30.0%
AATATTGGGGACTAAATTGA+CGG + Chr3:82660497-82660516 None:intergenic 30.0%
AATCTTCTCTATAAGGAACA+TGG + Chr3:82664298-82664317 None:intergenic 30.0%
ACAACAACAACATCAAGTTA+TGG - Chr3:82660039-82660058 MsG0380016377.01.T01:CDS 30.0%
ACGGAATGTGATATACTTTA+GGG + Chr3:82660478-82660497 None:intergenic 30.0%
ACTATTCAACATCCCATTAT+GGG - Chr3:82661491-82661510 MsG0380016377.01.T01:intron 30.0%
ACTTGTATGTAGAATGTGTT+GGG - Chr3:82663392-82663411 MsG0380016377.01.T01:intron 30.0%
AGAAAAACGTGAAACCAAAA+AGG + Chr3:82660344-82660363 None:intergenic 30.0%
AGAAGAAAATGTGGATTTCA+TGG - Chr3:82662334-82662353 MsG0380016377.01.T01:intron 30.0%
AGTGCATGTGAGATATAATT+TGG + Chr3:82663354-82663373 None:intergenic 30.0%
ATGTATTATCCACTTCACAA+AGG + Chr3:82664081-82664100 None:intergenic 30.0%
ATTACAATCTCATGGATACT+AGG - Chr3:82664014-82664033 MsG0380016377.01.T01:intron 30.0%
CAACTTTACATACTTCTGAA+AGG + Chr3:82661232-82661251 None:intergenic 30.0%
CATATGTAATCTTAAGGGTA+AGG + Chr3:82662462-82662481 None:intergenic 30.0%
CATTGATAGACACAAAAATC+TGG - Chr3:82660235-82660254 MsG0380016377.01.T01:CDS 30.0%
CGTCCTAAATAGAATTCATA+AGG - Chr3:82660966-82660985 MsG0380016377.01.T01:intron 30.0%
CTGAATTTAGATTGTTTGGT+TGG - Chr3:82663559-82663578 MsG0380016377.01.T01:intron 30.0%
GAAAAAGGAATTGTGGATAA+TGG - Chr3:82664257-82664276 MsG0380016377.01.T01:intron 30.0%
GATTAAAGTAGTAAAAGTCC+AGG + Chr3:82662040-82662059 None:intergenic 30.0%
GATTATAGTGTTTCCTCTAA+TGG - Chr3:82664136-82664155 MsG0380016377.01.T01:intron 30.0%
GTTTGATCTAATAGTTGCTA+TGG - Chr3:82661040-82661059 MsG0380016377.01.T01:intron 30.0%
TAAGGATGAAAAGATGGAAA+AGG - Chr3:82663603-82663622 MsG0380016377.01.T01:intron 30.0%
TACTATTCAACATCCCATTA+TGG - Chr3:82661490-82661509 MsG0380016377.01.T01:CDS 30.0%
TAGACATAAGGATGAAAAGA+TGG - Chr3:82663597-82663616 MsG0380016377.01.T01:intron 30.0%
TATAGGGTTTCTTAGACATA+AGG - Chr3:82663585-82663604 MsG0380016377.01.T01:intron 30.0%
TCAGCTAAATCTTCTCTATA+AGG + Chr3:82664305-82664324 None:intergenic 30.0%
TTAAATTAGGAACCTTGAGA+AGG + Chr3:82663256-82663275 None:intergenic 30.0%
TTAGATCAAACTGATTACAC+AGG + Chr3:82661031-82661050 None:intergenic 30.0%
TTCTATGTGTTTGTGCTTAT+TGG - Chr3:82660597-82660616 MsG0380016377.01.T01:intron 30.0%
! ATTCTATTTAGGACGTATCT+CGG + Chr3:82660961-82660980 None:intergenic 30.0%
!! AGTAAGTTGATGATTGACTT+GGG + Chr3:82660992-82661011 None:intergenic 30.0%
!! ATTGTTTGGTTGGTGATATA+GGG - Chr3:82663569-82663588 MsG0380016377.01.T01:intron 30.0%
!! TAGTAAGTTGATGATTGACT+TGG + Chr3:82660993-82661012 None:intergenic 30.0%
!!! TACATGTACCTTTTTTGTAC+AGG - Chr3:82662483-82662502 MsG0380016377.01.T01:intron 30.0%
!!! TCCCCAATATTTTAATAGCA+TGG - Chr3:82660506-82660525 MsG0380016377.01.T01:CDS 30.0%
AACTTGATTGTGACAGTGAT+TGG - Chr3:82661447-82661466 MsG0380016377.01.T01:CDS 35.0%
ACCAGACTTTACTTACCTAT+CGG - Chr3:82661759-82661778 MsG0380016377.01.T01:CDS 35.0%
ACTTGATTGTGACAGTGATT+GGG - Chr3:82661448-82661467 MsG0380016377.01.T01:CDS 35.0%
AGATATTTCCTCTATGAGAG+TGG - Chr3:82663098-82663117 MsG0380016377.01.T01:CDS 35.0%
AGTAATAAGAAGGAAGTCCA+GGG - Chr3:82660726-82660745 MsG0380016377.01.T01:CDS 35.0%
AGTCCATGATCTACTGAAAA+TGG - Chr3:82662263-82662282 MsG0380016377.01.T01:intron 35.0%
AGTCTGAAGGAGTAATAAGA+AGG - Chr3:82660716-82660735 MsG0380016377.01.T01:CDS 35.0%
ATACATATCGAGGAGAGAAA+AGG + Chr3:82663926-82663945 None:intergenic 35.0%
ATGCAAAACCAAGTGGAAAA+AGG - Chr3:82664242-82664261 MsG0380016377.01.T01:intron 35.0%
ATGCAGCCATTACAAATACT+AGG + Chr3:82662537-82662556 None:intergenic 35.0%
ATTACACAGGCATAATGCAT+AGG + Chr3:82661018-82661037 None:intergenic 35.0%
CCAAAGAAACAAGAAAACCA+GGG + Chr3:82660288-82660307 None:intergenic 35.0%
CGAGAGTCAAATCTAATTTG+AGG + Chr3:82661739-82661758 None:intergenic 35.0%
CGGAATGTGATATACTTTAG+GGG + Chr3:82660477-82660496 None:intergenic 35.0%
CTATCTTAGCATACATATCG+AGG + Chr3:82663936-82663955 None:intergenic 35.0%
CTCGATATGTATGCTAAGAT+AGG - Chr3:82663934-82663953 MsG0380016377.01.T01:intron 35.0%
CTTGATATTGAGGTCAAATG+CGG - Chr3:82662102-82662121 MsG0380016377.01.T01:intron 35.0%
GAATAGTATGTTGAGAGCAA+AGG + Chr3:82661478-82661497 None:intergenic 35.0%
GACGGAATGTGATATACTTT+AGG + Chr3:82660479-82660498 None:intergenic 35.0%
GATAGACACAAAAATCTGGA+TGG - Chr3:82660239-82660258 MsG0380016377.01.T01:CDS 35.0%
GCAATATAAACTGCCATTAG+AGG + Chr3:82664152-82664171 None:intergenic 35.0%
GCATGTGAGATATAATTTGG+TGG + Chr3:82663351-82663370 None:intergenic 35.0%
TACAGTAATGCAAAACCAAG+TGG - Chr3:82664235-82664254 MsG0380016377.01.T01:intron 35.0%
TGAACGATGAGAAGAAAATG+TGG - Chr3:82662325-82662344 MsG0380016377.01.T01:intron 35.0%
TGTTGCAATGATTTCTGTGT+CGG - Chr3:82663151-82663170 MsG0380016377.01.T01:intron 35.0%
TTACACAGGCATAATGCATA+GGG + Chr3:82661017-82661036 None:intergenic 35.0%
TTCTTCTTTGGACAAAATGC+AGG - Chr3:82662822-82662841 MsG0380016377.01.T01:CDS 35.0%
TTGATATTGAGGTCAAATGC+GGG - Chr3:82662103-82662122 MsG0380016377.01.T01:intron 35.0%
TTGCTTATGGTTATTAGCAG+AGG - Chr3:82661274-82661293 MsG0380016377.01.T01:intron 35.0%
TTGTATTCAGTTGTTGTGGT+TGG - Chr3:82660834-82660853 MsG0380016377.01.T01:intron 35.0%
! AAAGATAGTAATAGTGGGAG+TGG + Chr3:82661880-82661899 None:intergenic 35.0%
! AAAGTACCTAATTCTGTGAG+AGG - Chr3:82662884-82662903 MsG0380016377.01.T01:intron 35.0%
! AGAAAGTATACGGCATGATA+AGG + Chr3:82662678-82662697 None:intergenic 35.0%
! ATCTCATGGATACTAGGTTT+TGG - Chr3:82664020-82664039 MsG0380016377.01.T01:intron 35.0%
! ATGCGTCTAAGATTCTTCTT+TGG - Chr3:82662810-82662829 MsG0380016377.01.T01:CDS 35.0%
! CAGTAAGTAACTCTCCTTTT+TGG - Chr3:82660327-82660346 MsG0380016377.01.T01:intron 35.0%
! CTTGTTGTATTCAGTTGTTG+TGG - Chr3:82660830-82660849 MsG0380016377.01.T01:intron 35.0%
! GAAAGTATACGGCATGATAA+GGG + Chr3:82662677-82662696 None:intergenic 35.0%
! GGGCCTTATGAATTCTATTT+AGG + Chr3:82660972-82660991 None:intergenic 35.0%
! TACTTTAGGGGCAAATTTGA+AGG + Chr3:82660465-82660484 None:intergenic 35.0%
! TTGTTGTGGTTGGTACTTAT+TGG - Chr3:82660844-82660863 MsG0380016377.01.T01:intron 35.0%
! TTTTTCTAAATACTCACCGG+TGG + Chr3:82660920-82660939 None:intergenic 35.0%
!! GATTGTTTGGTTGGTGATAT+AGG - Chr3:82663568-82663587 MsG0380016377.01.T01:intron 35.0%
!! TGTTATTTCACAATTCGCAG+TGG - Chr3:82660629-82660648 MsG0380016377.01.T01:intron 35.0%
!! TTACTCCTTCAGACTTGTTA+AGG + Chr3:82660711-82660730 None:intergenic 35.0%
!!! AGGAGGAATTTTTTAGAAGC+AGG + Chr3:82660759-82660778 None:intergenic 35.0%
!!! GGAGGAATTTTTTAGAAGCA+GGG + Chr3:82660758-82660777 None:intergenic 35.0%
AAACCGATGCGATGATGATA+AGG + Chr3:82663706-82663725 None:intergenic 40.0%
AACATCCTCAAATCATGACG+AGG - Chr3:82660063-82660082 MsG0380016377.01.T01:CDS 40.0%
AACCACCTTAACAAGTCTGA+AGG - Chr3:82660703-82660722 MsG0380016377.01.T01:CDS 40.0%
AACCTTGAGAAGGAAAGAAG+CGG + Chr3:82663246-82663265 None:intergenic 40.0%
AAGCAGTGCTATGGCATAAA+TGG + Chr3:82663432-82663451 None:intergenic 40.0%
AAGGAAAGAAGCGGAGTTAA+GGG + Chr3:82663237-82663256 None:intergenic 40.0%
AAGGTGGCAAATGTGTTCAT+TGG - Chr3:82664113-82664132 MsG0380016377.01.T01:intron 40.0%
AAGTACCTCGTCATGATTTG+AGG + Chr3:82660071-82660090 None:intergenic 40.0%
ACATAGTAGTCTACCAAAGG+TGG - Chr3:82664097-82664116 MsG0380016377.01.T01:intron 40.0%
ACCGATAGGTAAGTAAAGTC+TGG + Chr3:82661763-82661782 None:intergenic 40.0%
ACCTATCTGCTATATTGTGC+AGG - Chr3:82663067-82663086 MsG0380016377.01.T01:CDS 40.0%
ACCTCAATATCAAGGATCGT+GGG + Chr3:82662096-82662115 None:intergenic 40.0%
ACTTACTGTTTCCAGGATCA+AGG + Chr3:82660315-82660334 None:intergenic 40.0%
AGAAAACCAGGGCCTATATA+TGG + Chr3:82660277-82660296 None:intergenic 40.0%
AGACTTTACTTACCTATCGG+TGG - Chr3:82661762-82661781 MsG0380016377.01.T01:CDS 40.0%
AGGCCATGATATCTCATTGA+GGG + Chr3:82662191-82662210 None:intergenic 40.0%
AGGTGGCAAATGTGTTCATT+GGG - Chr3:82664114-82664133 MsG0380016377.01.T01:intron 40.0%
ATGAACACATTTGCCACCTT+TGG + Chr3:82664113-82664132 None:intergenic 40.0%
ATGTAGACATTGGTAGATCG+TGG - Chr3:82663011-82663030 MsG0380016377.01.T01:intron 40.0%
ATGTGTTTGTGCTTATTGGC+TGG - Chr3:82660601-82660620 MsG0380016377.01.T01:intron 40.0%
ATTGTCTCCAGATAGGTCAT+TGG + Chr3:82663192-82663211 None:intergenic 40.0%
CCAAGTGGAAAAAGGAATTG+TGG - Chr3:82664250-82664269 MsG0380016377.01.T01:intron 40.0%
CGCATTTGACCTCAATATCA+AGG + Chr3:82662104-82662123 None:intergenic 40.0%
CGCGCTTATAATTCAGTCAT+TGG - Chr3:82660876-82660895 MsG0380016377.01.T01:CDS 40.0%
CTTCCTCACCTGTACAAAAA+AGG + Chr3:82662494-82662513 None:intergenic 40.0%
GAAGAGAGAGTGATACTTTG+TGG + Chr3:82660390-82660409 None:intergenic 40.0%
GAAGGTAAGGTAGATAACTG+AGG + Chr3:82664174-82664193 None:intergenic 40.0%
GAGAGTTACTTACTGTTTCC+AGG + Chr3:82660322-82660341 None:intergenic 40.0%
GAGTAATAAGAAGGAAGTCC+AGG - Chr3:82660725-82660744 MsG0380016377.01.T01:CDS 40.0%
GCCAAAGAAACAAGAAAACC+AGG + Chr3:82660289-82660308 None:intergenic 40.0%
GTTCAACATTGTCTCCAGAT+AGG + Chr3:82663199-82663218 None:intergenic 40.0%
GTTGCAATGATTTCTGTGTC+GGG - Chr3:82663152-82663171 MsG0380016377.01.T01:intron 40.0%
TCCTGACAAGGGAGAAAATA+CGG + Chr3:82662010-82662029 None:intergenic 40.0%
TCCTGCACAATATAGCAGAT+AGG + Chr3:82663071-82663090 None:intergenic 40.0%
TGTAGACATTGGTAGATCGT+GGG - Chr3:82663012-82663031 MsG0380016377.01.T01:intron 40.0%
TTGATGCCTCTCACAGAATT+AGG + Chr3:82662893-82662912 None:intergenic 40.0%
! AAATCGACTCCTCTAGTTCA+CGG - Chr3:82661851-82661870 MsG0380016377.01.T01:intron 40.0%
! ATTCTTGTGAGGTCCCATTT+TGG + Chr3:82663885-82663904 None:intergenic 40.0%
! CCACAATTCCTTTTTCCACT+TGG + Chr3:82664253-82664272 None:intergenic 40.0%
! CGTCCATTTTCAGTAGATCA+TGG + Chr3:82662269-82662288 None:intergenic 40.0%
! CTCAACAGTGTCTTTTCTGA+AGG + Chr3:82664192-82664211 None:intergenic 40.0%
! TTGGTGGTTACTGCTTAGTT+AGG + Chr3:82663335-82663354 None:intergenic 40.0%
! TTGTGCTGCTGCTAAACTTA+AGG + Chr3:82663862-82663881 None:intergenic 40.0%
! TTTTGTACAGGTGAGGAAGT+TGG - Chr3:82662495-82662514 MsG0380016377.01.T01:intron 40.0%
! TTTTTGCCATATATAGGCCC+TGG - Chr3:82660268-82660287 MsG0380016377.01.T01:CDS 40.0%
!! ATTGTTTTACCTCGTATCCG+TGG + Chr3:82660680-82660699 None:intergenic 40.0%
!! CAGTGTCTTTTCTGAAGGTA+AGG + Chr3:82664187-82664206 None:intergenic 40.0%
!! CCCTGGTTTTCTTGTTTCTT+TGG - Chr3:82660285-82660304 MsG0380016377.01.T01:CDS 40.0%
!! TTTTGAGTCTGCAGAGGTTT+GGG - Chr3:82661550-82661569 MsG0380016377.01.T01:intron 40.0%
!!! GTACCTTTTTTGTACAGGTG+AGG - Chr3:82662488-82662507 MsG0380016377.01.T01:intron 40.0%
AACAGAACTCCTGCCCATAA+TGG + Chr3:82661507-82661526 None:intergenic 45.0%
AACAGCAAGACTAGGTGCTA+TGG + Chr3:82663651-82663670 None:intergenic 45.0%
AAGCGAATCCACTCTCATAG+AGG + Chr3:82663109-82663128 None:intergenic 45.0%
ACAGAACTCCTGCCCATAAT+GGG + Chr3:82661506-82661525 None:intergenic 45.0%
ACCATCACAGGAACTTATGC+AGG - Chr3:82663470-82663489 MsG0380016377.01.T01:intron 45.0%
ACTTCACAAAGGCAGTACTG+AGG + Chr3:82664070-82664089 None:intergenic 45.0%
AGCAGCAGCACAACCAAAAT+GGG - Chr3:82663869-82663888 MsG0380016377.01.T01:intron 45.0%
AGCTCACTTGGTTGAGCTAA+GGG + Chr3:82662062-82662081 None:intergenic 45.0%
AGGAGTGGAATTAAGGCGAA+TGG + Chr3:82663842-82663861 None:intergenic 45.0%
ATAGCAGCTGACATACCTGA+AGG - Chr3:82661305-82661324 MsG0380016377.01.T01:intron 45.0%
ATCTTAACCCTCCGGTTCTT+AGG + Chr3:82661822-82661841 None:intergenic 45.0%
ATGATGGCAACAGCAAGACT+AGG + Chr3:82663659-82663678 None:intergenic 45.0%
CCAGCTTCTGGTGTACTTAA+GGG - Chr3:82662589-82662608 MsG0380016377.01.T01:intron 45.0%
CCTCAATATCAAGGATCGTG+GGG + Chr3:82662095-82662114 None:intergenic 45.0%
CCTTAAGTACACCAGAAGCT+GGG + Chr3:82662591-82662610 None:intergenic 45.0%
CTCAATATCAAGGATCGTGG+GGG + Chr3:82662094-82662113 None:intergenic 45.0%
CTGCTGCTAAACTTAAGGAG+TGG + Chr3:82663857-82663876 None:intergenic 45.0%
CTTAAGTACACCAGAAGCTG+GGG + Chr3:82662590-82662609 None:intergenic 45.0%
GAAGGAAAGAAGCGGAGTTA+AGG + Chr3:82663238-82663257 None:intergenic 45.0%
GACCTCAATATCAAGGATCG+TGG + Chr3:82662097-82662116 None:intergenic 45.0%
GAGGCCATGATATCTCATTG+AGG + Chr3:82662192-82662211 None:intergenic 45.0%
GATATCCCGCTACCAGAATA+AGG - Chr3:82664323-82664342 MsG0380016377.01.T01:CDS 45.0%
GATGGTAGAACTTTGTCCTG+AGG + Chr3:82663456-82663475 None:intergenic 45.0%
GGACAAAGTTCTACCATCAC+AGG - Chr3:82663458-82663477 MsG0380016377.01.T01:intron 45.0%
GGCCATGATATCTCATTGAG+GGG + Chr3:82662190-82662209 None:intergenic 45.0%
GTAGACATTGGTAGATCGTG+GGG - Chr3:82663013-82663032 MsG0380016377.01.T01:intron 45.0%
TAGATAGCACAAGAGCAGAG+TGG + Chr3:82662862-82662881 None:intergenic 45.0%
TAGCAGCAGCACAACCAAAA+TGG - Chr3:82663868-82663887 MsG0380016377.01.T01:intron 45.0%
TAGCTCACTTGGTTGAGCTA+AGG + Chr3:82662063-82662082 None:intergenic 45.0%
TATGTAAATCCCCCAGCTTC+TGG - Chr3:82662577-82662596 MsG0380016377.01.T01:intron 45.0%
TCAGTACTGCCTTTGTGAAG+TGG - Chr3:82664069-82664088 MsG0380016377.01.T01:CDS 45.0%
TCCTAGTAAGTTGTGATCCG+CGG + Chr3:82661790-82661809 None:intergenic 45.0%
TCCTGCATAAGTTCCTGTGA+TGG + Chr3:82663474-82663493 None:intergenic 45.0%
TCGCCTTATCATCATCGCAT+CGG - Chr3:82663700-82663719 MsG0380016377.01.T01:intron 45.0%
TCTTAACCCTCCGGTTCTTA+GGG + Chr3:82661821-82661840 None:intergenic 45.0%
TGCCCCTCAATGAGATATCA+TGG - Chr3:82662185-82662204 MsG0380016377.01.T01:intron 45.0%
TGTGACCTAAAACGCAGTCA+CGG - Chr3:82662129-82662148 MsG0380016377.01.T01:intron 45.0%
TTAAGTACACCAGAAGCTGG+GGG + Chr3:82662589-82662608 None:intergenic 45.0%
TTCAACATCCCATTATGGGC+AGG - Chr3:82661495-82661514 MsG0380016377.01.T01:intron 45.0%
TTTGAGTCTGCAGAGGTTTG+GGG - Chr3:82661551-82661570 MsG0380016377.01.T01:intron 45.0%
! CAGTCATTGGCTGCAAATCT+TGG - Chr3:82660889-82660908 MsG0380016377.01.T01:CDS 45.0%
! TCCGTATTTTCTCCCTTGTC+AGG - Chr3:82662006-82662025 MsG0380016377.01.T01:intron 45.0%
! TCTTTGGCTTACCTTGATCC+TGG - Chr3:82660301-82660320 MsG0380016377.01.T01:CDS 45.0%
!! AGTCTTGCTGTTGCCATCAT+TGG - Chr3:82663659-82663678 MsG0380016377.01.T01:intron 45.0%
!! CTCCTTCAGACTTGTTAAGG+TGG + Chr3:82660708-82660727 None:intergenic 45.0%
!! CTTTTGAGTCTGCAGAGGTT+TGG - Chr3:82661549-82661568 MsG0380016377.01.T01:intron 45.0%
!! GAGTGGATTCGCTTTGTTTG+TGG - Chr3:82663115-82663134 MsG0380016377.01.T01:intron 45.0%
!! GTGGAAACTGATTTGCAAGC+TGG - Chr3:82660648-82660667 MsG0380016377.01.T01:CDS 45.0%
!! TCTTGCTTTTGAGTCTGCAG+AGG - Chr3:82661544-82661563 MsG0380016377.01.T01:intron 45.0%
!!! TAACTTTTATTATTTATATT+TGG - Chr3:82661196-82661215 MsG0380016377.01.T01:CDS 5.0%
!!! TATTTATTTTATATAGTTTA+GGG + Chr3:82660421-82660440 None:intergenic 5.0%
!!! TTTTATAAAAAAATTAATGA+TGG + Chr3:82662718-82662737 None:intergenic 5.0%
ACCGCGGATCACAACTTACT+AGG - Chr3:82661786-82661805 MsG0380016377.01.T01:CDS 50.0%
ATAGCACAAGAGCAGAGTGG+AGG + Chr3:82662859-82662878 None:intergenic 50.0%
ATATCAAGGATCGTGGGGGT+TGG + Chr3:82662090-82662109 None:intergenic 50.0%
ATGTTTGTGCCCAAACTGGC+TGG - Chr3:82662613-82662632 MsG0380016377.01.T01:intron 50.0%
CAGGGTTCGAATCCTGACAA+GGG + Chr3:82662021-82662040 None:intergenic 50.0%
CATGATAAGGGCCCCCAAAA+GGG + Chr3:82662665-82662684 None:intergenic 50.0%
CCCAGCTTCTGGTGTACTTA+AGG - Chr3:82662588-82662607 MsG0380016377.01.T01:intron 50.0%
CCCCAAAAGGGCAATAGCAT+CGG + Chr3:82662653-82662672 None:intergenic 50.0%
CCCCACGATCCTTGATATTG+AGG - Chr3:82662092-82662111 MsG0380016377.01.T01:intron 50.0%
CCCTTAAGTACACCAGAAGC+TGG + Chr3:82662592-82662611 None:intergenic 50.0%
CTCCGCTTCTTTCCTTCTCA+AGG - Chr3:82663241-82663260 MsG0380016377.01.T01:intron 50.0%
CTCCGGTTCTTAGGGGAAAA+GGG + Chr3:82661813-82661832 None:intergenic 50.0%
CTTAACCCTCCGGTTCTTAG+GGG + Chr3:82661820-82661839 None:intergenic 50.0%
GCAAATCTTGGCGTAACCAC+CGG - Chr3:82660901-82660920 MsG0380016377.01.T01:CDS 50.0%
GCCAGAAGAACCACCAATGA+TGG + Chr3:82663675-82663694 None:intergenic 50.0%
GGCATCAATGTAAGCCACTC+AGG - Chr3:82662905-82662924 MsG0380016377.01.T01:intron 50.0%
GGGAATGTTTGTGCCCAAAC+TGG - Chr3:82662609-82662628 MsG0380016377.01.T01:intron 50.0%
GTGACCTAAAACGCAGTCAC+GGG - Chr3:82662130-82662149 MsG0380016377.01.T01:intron 50.0%
TATCAAGGATCGTGGGGGTT+GGG + Chr3:82662089-82662108 None:intergenic 50.0%
TGCAGGACAGTACATCATGC+AGG - Chr3:82663487-82663506 MsG0380016377.01.T01:intron 50.0%
TGCTCTGCCAATGACCTATC+TGG - Chr3:82663182-82663201 MsG0380016377.01.T01:intron 50.0%
TTGCAAGCTGGAGCTAACCA+CGG - Chr3:82660660-82660679 MsG0380016377.01.T01:CDS 50.0%
! AGCCGATGCTATTGCCCTTT+TGG - Chr3:82662648-82662667 MsG0380016377.01.T01:intron 50.0%
! CATTGAGGGGCATACAAGCA+AGG + Chr3:82662177-82662196 None:intergenic 50.0%
! CCGATGCTATTGCCCTTTTG+GGG - Chr3:82662650-82662669 MsG0380016377.01.T01:intron 50.0%
! CGATGCTATTGCCCTTTTGG+GGG - Chr3:82662651-82662670 MsG0380016377.01.T01:intron 50.0%
! CTTTTCCCCTAAGAACCGGA+GGG - Chr3:82661812-82661831 MsG0380016377.01.T01:CDS 50.0%
! GACCCTTTTCCCCTAAGAAC+CGG - Chr3:82661808-82661827 MsG0380016377.01.T01:CDS 50.0%
! GCCATCATTGGTGGTTCTTC+TGG - Chr3:82663671-82663690 MsG0380016377.01.T01:CDS 50.0%
! GCCGATGCTATTGCCCTTTT+GGG - Chr3:82662649-82662668 MsG0380016377.01.T01:intron 50.0%
!! AAGGGCAATAGCATCGGCTA+CGG + Chr3:82662647-82662666 None:intergenic 50.0%
!! CTTGCTGTTGCCATCATTGG+TGG - Chr3:82663662-82663681 MsG0380016377.01.T01:intron 50.0%
!!! GCGTGCTGAGTTTTGAACAG+TGG - Chr3:82661931-82661950 MsG0380016377.01.T01:intron 50.0%
ATCAAGGATCGTGGGGGTTG+GGG + Chr3:82662088-82662107 None:intergenic 55.0%
CCAGGGTTCGAATCCTGACA+AGG + Chr3:82662022-82662041 None:intergenic 55.0%
CCTCCGGTTCTTAGGGGAAA+AGG + Chr3:82661814-82661833 None:intergenic 55.0%
CCTTGTCAGGATTCGAACCC+TGG - Chr3:82662019-82662038 MsG0380016377.01.T01:intron 55.0%
CTTACCTATCGGTGGAACCG+CGG - Chr3:82661770-82661789 MsG0380016377.01.T01:CDS 55.0%
GAGTGGTAGCCGTGAACTAG+AGG + Chr3:82661863-82661882 None:intergenic 55.0%
GCAGCTGACATACCTGAAGG+TGG - Chr3:82661308-82661327 MsG0380016377.01.T01:intron 55.0%
GCATGATAAGGGCCCCCAAA+AGG + Chr3:82662666-82662685 None:intergenic 55.0%
GCTCCTTCACCAGCCAGTTT+GGG + Chr3:82662625-82662644 None:intergenic 55.0%
TAGAAGCAGGGCTAGAACCC+TGG + Chr3:82660746-82660765 None:intergenic 55.0%
TCCTGAGGCAAGCAGTGCTA+TGG + Chr3:82663441-82663460 None:intergenic 55.0%
TGGAGCTAACCACGGATACG+AGG - Chr3:82660668-82660687 MsG0380016377.01.T01:CDS 55.0%
TGGGCAGGAGTTCTGTTGAC+TGG - Chr3:82661510-82661529 MsG0380016377.01.T01:intron 55.0%
! ATCGCCCGTGACTGCGTTTT+AGG + Chr3:82662137-82662156 None:intergenic 55.0%
! CCTTTTCCCCTAAGAACCGG+AGG - Chr3:82661811-82661830 MsG0380016377.01.T01:CDS 55.0%
GCCATAGCACTGCTTGCCTC+AGG - Chr3:82663437-82663456 MsG0380016377.01.T01:CDS 60.0%
GGCTCCTTCACCAGCCAGTT+TGG + Chr3:82662626-82662645 None:intergenic 60.0%
GTGCCCAAACTGGCTGGTGA+AGG - Chr3:82662619-82662638 MsG0380016377.01.T01:intron 60.0%
TCAAGGATCGTGGGGGTTGG+GGG + Chr3:82662087-82662106 None:intergenic 60.0%
TGATCCGCGGTTCCACCGAT+AGG + Chr3:82661777-82661796 None:intergenic 60.0%
CAAGGATCGTGGGGGTTGGG+GGG + Chr3:82662086-82662105 None:intergenic 65.0%
GGGTTGGGGGGTAGCTCACT+TGG + Chr3:82662074-82662093 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 82660010 82664343 82660010 ID=MsG0380016377.01;Name=MsG0380016377.01
Chr3 mRNA 82660010 82664343 82660010 ID=MsG0380016377.01.T01;Parent=MsG0380016377.01;Name=MsG0380016377.01.T01;_AED=0.33;_eAED=0.34;_QI=0|0|0|1|1|1|13|0|523
Chr3 exon 82664269 82664343 82664269 ID=MsG0380016377.01.T01:exon:33160;Parent=MsG0380016377.01.T01
Chr3 exon 82664025 82664109 82664025 ID=MsG0380016377.01.T01:exon:33159;Parent=MsG0380016377.01.T01
Chr3 exon 82663664 82663704 82663664 ID=MsG0380016377.01.T01:exon:33158;Parent=MsG0380016377.01.T01
Chr3 exon 82663401 82663461 82663401 ID=MsG0380016377.01.T01:exon:33157;Parent=MsG0380016377.01.T01
Chr3 exon 82663024 82663131 82663024 ID=MsG0380016377.01.T01:exon:33156;Parent=MsG0380016377.01.T01
Chr3 exon 82662781 82662890 82662781 ID=MsG0380016377.01.T01:exon:33155;Parent=MsG0380016377.01.T01
Chr3 exon 82661667 82661848 82661667 ID=MsG0380016377.01.T01:exon:33154;Parent=MsG0380016377.01.T01
Chr3 exon 82661440 82661509 82661440 ID=MsG0380016377.01.T01:exon:33153;Parent=MsG0380016377.01.T01
Chr3 exon 82661091 82661264 82661091 ID=MsG0380016377.01.T01:exon:33152;Parent=MsG0380016377.01.T01
Chr3 exon 82660845 82660949 82660845 ID=MsG0380016377.01.T01:exon:33151;Parent=MsG0380016377.01.T01
Chr3 exon 82660632 82660763 82660632 ID=MsG0380016377.01.T01:exon:33150;Parent=MsG0380016377.01.T01
Chr3 exon 82660440 82660535 82660440 ID=MsG0380016377.01.T01:exon:33149;Parent=MsG0380016377.01.T01
Chr3 exon 82660010 82660342 82660010 ID=MsG0380016377.01.T01:exon:33148;Parent=MsG0380016377.01.T01
Chr3 CDS 82664269 82664343 82664269 ID=MsG0380016377.01.T01:cds;Parent=MsG0380016377.01.T01
Chr3 CDS 82664025 82664109 82664025 ID=MsG0380016377.01.T01:cds;Parent=MsG0380016377.01.T01
Chr3 CDS 82663664 82663704 82663664 ID=MsG0380016377.01.T01:cds;Parent=MsG0380016377.01.T01
Chr3 CDS 82663401 82663461 82663401 ID=MsG0380016377.01.T01:cds;Parent=MsG0380016377.01.T01
Chr3 CDS 82663024 82663131 82663024 ID=MsG0380016377.01.T01:cds;Parent=MsG0380016377.01.T01
Chr3 CDS 82662781 82662890 82662781 ID=MsG0380016377.01.T01:cds;Parent=MsG0380016377.01.T01
Chr3 CDS 82661667 82661848 82661667 ID=MsG0380016377.01.T01:cds;Parent=MsG0380016377.01.T01
Chr3 CDS 82661440 82661509 82661440 ID=MsG0380016377.01.T01:cds;Parent=MsG0380016377.01.T01
Chr3 CDS 82661091 82661264 82661091 ID=MsG0380016377.01.T01:cds;Parent=MsG0380016377.01.T01
Chr3 CDS 82660845 82660949 82660845 ID=MsG0380016377.01.T01:cds;Parent=MsG0380016377.01.T01
Chr3 CDS 82660632 82660763 82660632 ID=MsG0380016377.01.T01:cds;Parent=MsG0380016377.01.T01
Chr3 CDS 82660440 82660535 82660440 ID=MsG0380016377.01.T01:cds;Parent=MsG0380016377.01.T01
Chr3 CDS 82660010 82660342 82660010 ID=MsG0380016377.01.T01:cds;Parent=MsG0380016377.01.T01
Gene Sequence

>MsG0380016377.01.T01

ATGGCAGACTTGTTACAGCAGCAGCAGCAACAACAACAACATCAAGTTATGGAAACATCCTCAAATCATGACGAGACACAAAAATCTGGATGGAGAAAGTTTTTGCCATATATAGGCCCTGGTTTTCTTGTTTCTTTGGCTTACCTTGATCCTGGAAACATGGAAACTGATTTGCAAGCTGGAGCTAACCACGGATACGAGTCATTGGCTGCAAATCTTGGCGTAACCACCGGTGAGTATTTAGAAAAATTCAAGTCTCATGGCAAACACCTTTCAGAAGTATGTAAAGTTGAATATCCATTATTTGTGAAGTATTGCTTATGGTTATTAGCAGAGGTTGCTGTCATAGCAGCTGACATACCTGAAGGTGTGATTGGGACAGCCTTTGCTCTCAACATACTATTCAACATCCCATTATGGGCAGGAGTTCTGTTGACTGGCTTCAGCACTCTCTTGCTTTTGAGTCTGCAGAGGTTTGGGGTGAGGAAGTTGGAACTACTGATAACAATCCTAGTATTTGTAATGGCTGCATGTTTCTTTGCTGAAATGAGCTATGTAAATCCCCCAGCTTCTGGTGTACTTAAGGGAATGTTTGTGCCCAAACTGGCTGGTGAAGGAGCCGTAGCCGATGCTATTGCCCTTTTGGGGGCCCTTATCATGCCGCACAATCTTTTCCTCCACTCTGCTCTTGTGCTATCTAGAAAAGTACCTAATTCTGTGAGAGGCATCAATGAAGCATGTAGATATTTCCTCTATGAGAGTGGATTCGCTTTGTTTGTGGCGTTTTTAATCAATGTTGCAATGATTTCTGTGTCGGGCACTGTCTGCTCTGCCAATGACCTATCTGGAGACAATGTTGAACGCTGCAATGATCTCACCCTTAACTCCGCTTCTTTCCTTCTCAAGAATGTGTTGGGACGATCGAGCTCAACCATTTATGCCATAGCACTGCTTGCCTCAGGACAAAGTTCTACCATCACAGGAACTTATGCAGGACAGTACATCATGCAGGGTTTCTTAGACATAAGGATGAAAAGATGGAAAAGGAACTTGATGACTAGATGCATTGCCATAGCACCTAGTCTTGCTGTTGCCATCATTGGTGGTTCTTCTGGCTCTAGTCGCCTTATCATCATCGCATCGATGATACTTTCTTTTGAGCTTCCATTCGCCTTAATTCCACTCCTTAAGTTTAGCAGCAGCACAACCAAAATGGGACCTCACAAGAATTCTATTATTGTCATTACAATCTCATGGATACTAGGTTTTGGAATCATTAGTATCAATGTGTACTACCTCAGTACTGCCTTTGTGAAGTGGATAATACATAGTAGTCTACCAAAGGTGGCAAATGTGTTCATTGGGATTATAGTGTTTCCTCTAATGGCAGTTTATATTGCCTCAGTTATCTACCTTACCTTCAGAAAAGACACTGTTGAGACGTTCATCGAGACGAAAAATGATACAGTAATGCAAAACCAAGTGGAAAAAGGAATTGTGGATAATGGTCAGTTAGAGTTGAGCCATGTTCCTTATAGAGAAGATTTAGCTGATATCCCGCTACCAGAATAA

Protein sequence

>MsG0380016377.01.T01

MADLLQQQQQQQQHQVMETSSNHDETQKSGWRKFLPYIGPGFLVSLAYLDPGNMETDLQAGANHGYESLAANLGVTTGEYLEKFKSHGKHLSEVCKVEYPLFVKYCLWLLAEVAVIAADIPEGVIGTAFALNILFNIPLWAGVLLTGFSTLLLLSLQRFGVRKLELLITILVFVMAACFFAEMSYVNPPASGVLKGMFVPKLAGEGAVADAIALLGALIMPHNLFLHSALVLSRKVPNSVRGINEACRYFLYESGFALFVAFLINVAMISVSGTVCSANDLSGDNVERCNDLTLNSASFLLKNVLGRSSSTIYAIALLASGQSSTITGTYAGQYIMQGFLDIRMKRWKRNLMTRCIAIAPSLAVAIIGGSSGSSRLIIIASMILSFELPFALIPLLKFSSSTTKMGPHKNSIIVITISWILGFGIISINVYYLSTAFVKWIIHSSLPKVANVFIGIIVFPLMAVYIASVIYLTFRKDTVETFIETKNDTVMQNQVEKGIVDNGQLELSHVPYREDLADIPLPE*