Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042642.01.T01 | XP_003627194.1 | 80.782 | 588 | 80 | 6 | 1 | 557 | 222 | 807 | 0 | 944 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042642.01.T01 | P38414 | 60.692 | 636 | 164 | 8 | 1 | 557 | 238 | 866 | 0 | 743 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042642.01.T01 | G7LIY9 | 80.782 | 588 | 80 | 6 | 1 | 557 | 222 | 807 | 0.0 | 944 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048134.01 | MsG0880042642.01 | 0.802618 | 5.150306e-49 | 2.534487e-46 |
| MsG0080048509.01 | MsG0880042642.01 | 0.831925 | 1.265763e-55 | 1.393706e-52 |
| MsG0180000399.01 | MsG0880042642.01 | 0.803859 | 2.851375e-49 | 1.448503e-46 |
| MsG0180001029.01 | MsG0880042642.01 | 0.801160 | 1.026449e-48 | 4.867835e-46 |
| MsG0180003237.01 | MsG0880042642.01 | 0.807563 | 4.756140e-50 | 2.657588e-47 |
| MsG0180003320.01 | MsG0880042642.01 | 0.818276 | 2.133165e-52 | 1.589546e-49 |
| MsG0180003375.01 | MsG0880042642.01 | 0.835207 | 1.919435e-56 | 2.331083e-53 |
| MsG0180003484.01 | MsG0880042642.01 | 0.815539 | 8.777212e-52 | 6.068374e-49 |
| MsG0180003504.01 | MsG0880042642.01 | 0.814498 | 1.494480e-51 | 1.004455e-48 |
| MsG0180003600.01 | MsG0880042642.01 | 0.802918 | 4.465308e-49 | 2.214288e-46 |
| MsG0180004232.01 | MsG0880042642.01 | 0.804586 | 2.011724e-49 | 1.041210e-46 |
| MsG0180004359.01 | MsG0880042642.01 | 0.805994 | 1.020420e-49 | 5.476394e-47 |
| MsG0180004424.01 | MsG0880042642.01 | 0.816800 | 4.588369e-52 | 3.283477e-49 |
| MsG0180005059.01 | MsG0880042642.01 | 0.846460 | 2.141641e-59 | 3.689315e-56 |
| MsG0180005060.01 | MsG0880042642.01 | 0.812344 | 4.444724e-51 | 2.819022e-48 |
| MsG0180005080.01 | MsG0880042642.01 | 0.830718 | 2.507592e-55 | 2.663903e-52 |
| MsG0180005082.01 | MsG0880042642.01 | 0.839084 | 1.957439e-57 | 2.673902e-54 |
| MsG0180006253.01 | MsG0880042642.01 | 0.819504 | 1.121674e-52 | 8.647768e-50 |
| MsG0780040670.01 | MsG0880042642.01 | 0.830253 | 3.259433e-55 | 3.415898e-52 |
| MsG0780040716.01 | MsG0880042642.01 | 0.807507 | 4.886141e-50 | 2.726525e-47 |
| MsG0780040991.01 | MsG0880042642.01 | 0.810884 | 9.232903e-51 | 5.632381e-48 |
| MsG0780041036.01 | MsG0880042642.01 | 0.807820 | 4.194112e-50 | 2.359358e-47 |
| MsG0780041447.01 | MsG0880042642.01 | 0.814659 | 1.376388e-51 | 9.290491e-49 |
| MsG0880042633.01 | MsG0880042642.01 | 0.868637 | 5.633228e-66 | 2.052504e-62 |
| MsG0880042635.01 | MsG0880042642.01 | 0.816851 | 4.468677e-52 | 3.202436e-49 |
| MsG0880042640.01 | MsG0880042642.01 | 0.829167 | 5.988481e-55 | 6.080791e-52 |
| MsG0880042641.01 | MsG0880042642.01 | 0.827179 | 1.805070e-54 | 1.729550e-51 |
| MsG0880042642.01 | MsG0880045801.01 | 0.816185 | 6.298476e-52 | 4.432310e-49 |
| MsG0880042642.01 | MsG0880045851.01 | 0.831562 | 1.556228e-55 | 1.695109e-52 |
| MsG0880042642.01 | MsG0880045854.01 | 0.838002 | 3.723622e-57 | 4.921878e-54 |
| MsG0880042642.01 | MsG0880046166.01 | 0.809869 | 1.528642e-50 | 9.078215e-48 |
| MsG0880042642.01 | MsG0880046402.01 | 0.811527 | 6.696628e-51 | 4.155134e-48 |
| MsG0880042642.01 | MsG0880046946.01 | 0.828954 | 6.746602e-55 | 6.806812e-52 |
| MsG0880042642.01 | MsG0880047259.01 | 0.819877 | 9.220043e-53 | 7.182698e-50 |
| MsG0880042642.01 | MsG0880047383.01 | 0.806747 | 7.078893e-50 | 3.872750e-47 |
| MsG0880042642.01 | MsG0880047450.01 | 0.820541 | 6.495218e-53 | 5.154012e-50 |
| MsG0880042642.01 | MsG0880047714.01 | 0.808335 | 3.258232e-50 | 1.858022e-47 |
| MsG0280010623.01 | MsG0880042642.01 | 0.809759 | 1.614385e-50 | 9.560195e-48 |
| MsG0280010936.01 | MsG0880042642.01 | 0.808367 | 3.207500e-50 | 1.830649e-47 |
| MsG0380012889.01 | MsG0880042642.01 | 0.810802 | 9.616474e-51 | 5.853357e-48 |
| MsG0380013212.01 | MsG0880042642.01 | 0.842280 | 2.847728e-58 | 4.296299e-55 |
| MsG0380013213.01 | MsG0880042642.01 | 0.855206 | 7.370244e-62 | 1.688257e-58 |
| MsG0380013214.01 | MsG0880042642.01 | 0.813090 | 3.052658e-51 | 1.974564e-48 |
| MsG0380013226.01 | MsG0880042642.01 | 0.842750 | 2.136304e-58 | 3.270516e-55 |
| MsG0380013239.01 | MsG0880042642.01 | 0.834820 | 2.402574e-56 | 2.883908e-53 |
| MsG0680031200.01 | MsG0880042642.01 | 0.807610 | 4.648263e-50 | 2.600478e-47 |
| MsG0680032461.01 | MsG0880042642.01 | 0.820172 | 7.891576e-53 | 6.198804e-50 |
| MsG0680032932.01 | MsG0880042642.01 | 0.846073 | 2.731228e-59 | 4.645696e-56 |
| MsG0680034238.01 | MsG0880042642.01 | 0.843487 | 1.359674e-58 | 2.130575e-55 |
| MsG0680034254.01 | MsG0880042642.01 | 0.803673 | 3.115638e-49 | 1.575113e-46 |
| MsG0680034354.01 | MsG0880042642.01 | 0.803472 | 3.429731e-49 | 1.725027e-46 |
| MsG0680034391.01 | MsG0880042642.01 | 0.802707 | 4.938409e-49 | 2.435742e-46 |
| MsG0680034417.01 | MsG0880042642.01 | 0.801352 | 9.375580e-49 | 4.467850e-46 |
| MsG0680034969.01 | MsG0880042642.01 | 0.802952 | 4.395246e-49 | 2.181317e-46 |
| MsG0680034974.01 | MsG0880042642.01 | 0.853150 | 2.889804e-61 | 6.183429e-58 |
| MsG0680034978.01 | MsG0880042642.01 | 0.815479 | 9.050545e-52 | 6.247420e-49 |
| MsG0680035344.01 | MsG0880042642.01 | 0.801025 | 1.093597e-48 | 5.168917e-46 |
| MsG0480018559.01 | MsG0880042642.01 | 0.843323 | 1.503700e-58 | 2.344443e-55 |
| MsG0480018617.01 | MsG0880042642.01 | 0.814833 | 1.259945e-51 | 8.544427e-49 |
| MsG0480018692.01 | MsG0880042642.01 | 0.839381 | 1.639085e-57 | 2.259748e-54 |
| MsG0480018697.01 | MsG0880042642.01 | 0.806431 | 8.255356e-50 | 4.479929e-47 |
| MsG0480019348.01 | MsG0880042642.01 | 0.800158 | 1.642944e-48 | 7.595606e-46 |
| MsG0480020285.01 | MsG0880042642.01 | 0.809302 | 2.024086e-50 | 1.184100e-47 |
| MsG0480020539.01 | MsG0880042642.01 | 0.807688 | 4.473380e-50 | 2.507807e-47 |
| MsG0480020904.01 | MsG0880042642.01 | 0.826587 | 2.499413e-54 | 2.353848e-51 |
| MsG0480021091.01 | MsG0880042642.01 | 0.801855 | 7.393107e-49 | 3.568265e-46 |
| MsG0480021129.01 | MsG0880042642.01 | 0.801040 | 1.086229e-48 | 5.135883e-46 |
| MsG0480021133.01 | MsG0880042642.01 | 0.836346 | 9.878561e-57 | 1.241584e-53 |
| MsG0480021236.01 | MsG0880042642.01 | 0.808955 | 2.401957e-50 | 1.392114e-47 |
| MsG0480022833.01 | MsG0880042642.01 | 0.826328 | 2.881384e-54 | 2.693714e-51 |
| MsG0480023322.01 | MsG0880042642.01 | 0.814576 | 1.436167e-51 | 9.672595e-49 |
| MsG0480023429.01 | MsG0880042642.01 | 0.802665 | 5.038011e-49 | 2.482075e-46 |
| MsG0480023432.01 | MsG0880042642.01 | 0.802977 | 4.341892e-49 | 2.156196e-46 |
| MsG0580025007.01 | MsG0880042642.01 | 0.836879 | 7.222585e-57 | 9.224158e-54 |
| MsG0580025024.01 | MsG0880042642.01 | 0.857993 | 1.117557e-62 | 2.810138e-59 |
| MsG0580025193.01 | MsG0880042642.01 | 0.836457 | 9.256496e-57 | 1.167187e-53 |
| MsG0380015659.01 | MsG0880042642.01 | 0.815268 | 1.008351e-51 | 6.919777e-49 |
| MsG0380017901.01 | MsG0880042642.01 | 0.859004 | 5.581896e-63 | 1.452366e-59 |
| MsG0380017918.01 | MsG0880042642.01 | -0.803609 | 3.213076e-49 | 1.621771e-46 |
| MsG0480018406.01 | MsG0880042642.01 | 0.800359 | 1.495706e-48 | 6.950641e-46 |
| MsG0480018433.01 | MsG0880042642.01 | 0.823160 | 1.608238e-53 | 1.373930e-50 |
| MsG0480018439.01 | MsG0880042642.01 | 0.801805 | 7.570127e-49 | 3.648942e-46 |
| MsG0580026148.01 | MsG0880042642.01 | 0.802909 | 4.485222e-49 | 2.223650e-46 |
| MsG0580026311.01 | MsG0880042642.01 | 0.817057 | 4.016036e-52 | 2.894439e-49 |
| MsG0580026521.01 | MsG0880042642.01 | 0.819942 | 8.910114e-53 | 6.953892e-50 |
| MsG0580027751.01 | MsG0880042642.01 | 0.827497 | 1.514605e-54 | 1.464711e-51 |
| MsG0580027752.01 | MsG0880042642.01 | 0.812626 | 3.856851e-51 | 2.464426e-48 |
| MsG0580027753.01 | MsG0880042642.01 | 0.809650 | 1.703815e-50 | 1.006061e-47 |
| MsG0580029240.01 | MsG0880042642.01 | 0.809242 | 2.084649e-50 | 1.217629e-47 |
| MsG0580029937.01 | MsG0880042642.01 | 0.815522 | 8.854200e-52 | 6.118833e-49 |
| MsG0680030379.01 | MsG0880042642.01 | 0.801363 | 9.329735e-49 | 4.447191e-46 |
| MsG0680030613.01 | MsG0880042642.01 | 0.807121 | 5.901345e-50 | 3.259818e-47 |
| MsG0280007199.01 | MsG0880042642.01 | 0.811346 | 7.328755e-51 | 4.525318e-48 |
| MsG0280007602.01 | MsG0880042642.01 | 0.827345 | 1.647003e-54 | 1.585929e-51 |
| MsG0280007677.01 | MsG0880042642.01 | 0.804533 | 2.063526e-49 | 1.066541e-46 |
| MsG0280007678.01 | MsG0880042642.01 | 0.803564 | 3.283026e-49 | 1.655242e-46 |
| MsG0280007689.01 | MsG0880042642.01 | 0.844001 | 9.907889e-59 | 1.577854e-55 |
| MsG0280008178.01 | MsG0880042642.01 | 0.841492 | 4.597849e-58 | 6.767468e-55 |
| MsG0280008180.01 | MsG0880042642.01 | 0.830982 | 2.161320e-55 | 2.313944e-52 |
| MsG0280008226.01 | MsG0880042642.01 | 0.819316 | 1.238043e-52 | 9.493974e-50 |
| MsG0280009253.01 | MsG0880042642.01 | 0.847294 | 1.266538e-59 | 2.240532e-56 |
| MsG0280010425.01 | MsG0880042642.01 | 0.826852 | 2.160382e-54 | 2.050180e-51 |
| MsG0780036208.01 | MsG0880042642.01 | 0.802470 | 5.525911e-49 | 2.709071e-46 |
| MsG0780036376.01 | MsG0880042642.01 | 0.827659 | 1.384266e-54 | 1.344933e-51 |
| MsG0780036649.01 | MsG0880042642.01 | 0.806224 | 9.126634e-50 | 4.926965e-47 |
| MsG0780036839.01 | MsG0880042642.01 | 0.827725 | 1.335232e-54 | 1.299831e-51 |
| MsG0780038307.01 | MsG0880042642.01 | 0.836252 | 1.043382e-56 | 1.307786e-53 |
| MsG0780038519.01 | MsG0880042642.01 | 0.818322 | 2.082449e-52 | 1.553793e-49 |
| MsG0780039237.01 | MsG0880042642.01 | 0.821703 | 3.507213e-53 | 2.874687e-50 |
| MsG0780039686.01 | MsG0880042642.01 | 0.816404 | 5.628498e-52 | 3.984467e-49 |
| MsG0780039883.01 | MsG0880042642.01 | 0.814959 | 1.181246e-51 | 8.038097e-49 |
| MsG0780039916.01 | MsG0880042642.01 | 0.825836 | 3.771668e-54 | 3.477148e-51 |
| MsG0780039923.01 | MsG0880042642.01 | 0.836695 | 8.049729e-57 | 1.022301e-53 |
| MsG0780039925.01 | MsG0880042642.01 | 0.830233 | 3.295790e-55 | 3.452079e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042642.01.T01 | MTR_8g018650 | 80.782 | 588 | 80 | 6 | 1 | 557 | 222 | 807 | 0.0 | 944 |
| MsG0880042642.01.T01 | MTR_8g018620 | 77.572 | 593 | 90 | 8 | 1 | 557 | 222 | 807 | 0.0 | 894 |
| MsG0880042642.01.T01 | MTR_8g018570 | 60.890 | 629 | 174 | 5 | 1 | 557 | 242 | 870 | 0.0 | 743 |
| MsG0880042642.01.T01 | MTR_8g018430 | 57.870 | 629 | 193 | 5 | 1 | 557 | 233 | 861 | 0.0 | 714 |
| MsG0880042642.01.T01 | MTR_8g018690 | 58.268 | 635 | 176 | 10 | 1 | 557 | 222 | 845 | 0.0 | 708 |
| MsG0880042642.01.T01 | MTR_8g018690 | 58.268 | 635 | 176 | 10 | 1 | 557 | 242 | 865 | 0.0 | 708 |
| MsG0880042642.01.T01 | MTR_8g018550 | 59.618 | 629 | 182 | 6 | 1 | 557 | 240 | 868 | 0.0 | 706 |
| MsG0880042642.01.T01 | MTR_8g020990 | 57.552 | 629 | 195 | 7 | 1 | 557 | 240 | 868 | 0.0 | 703 |
| MsG0880042642.01.T01 | MTR_8g018450 | 59.046 | 608 | 193 | 8 | 1 | 557 | 226 | 828 | 0.0 | 701 |
| MsG0880042642.01.T01 | MTR_8g018510 | 57.638 | 635 | 185 | 7 | 1 | 557 | 241 | 869 | 0.0 | 701 |
| MsG0880042642.01.T01 | MTR_8g018520 | 56.916 | 629 | 199 | 7 | 1 | 557 | 240 | 868 | 0.0 | 692 |
| MsG0880042642.01.T01 | MTR_8g018420 | 51.351 | 629 | 234 | 5 | 1 | 557 | 228 | 856 | 0.0 | 615 |
| MsG0880042642.01.T01 | MTR_2g099570 | 52.464 | 629 | 225 | 9 | 2 | 557 | 234 | 861 | 0.0 | 610 |
| MsG0880042642.01.T01 | MTR_8g018590 | 52.459 | 610 | 236 | 10 | 1 | 557 | 215 | 823 | 0.0 | 594 |
| MsG0880042642.01.T01 | MTR_5g024020 | 50.315 | 634 | 229 | 13 | 2 | 557 | 242 | 867 | 0.0 | 575 |
| MsG0880042642.01.T01 | MTR_8g018735 | 48.885 | 628 | 247 | 8 | 2 | 557 | 240 | 865 | 0.0 | 572 |
| MsG0880042642.01.T01 | MTR_8g021020 | 69.388 | 392 | 96 | 1 | 190 | 557 | 40 | 431 | 0.0 | 572 |
| MsG0880042642.01.T01 | MTR_8g018730 | 48.885 | 628 | 247 | 8 | 2 | 557 | 239 | 864 | 0.0 | 570 |
| MsG0880042642.01.T01 | MTR_2g099560 | 49.206 | 630 | 241 | 9 | 2 | 557 | 239 | 863 | 0.0 | 567 |
| MsG0880042642.01.T01 | MTR_5g024020 | 50.162 | 618 | 218 | 12 | 2 | 557 | 242 | 831 | 0.0 | 563 |
| MsG0880042642.01.T01 | MTR_7g113410 | 47.881 | 637 | 247 | 10 | 2 | 557 | 235 | 867 | 0.0 | 551 |
| MsG0880042642.01.T01 | MTR_8g018730 | 48.500 | 600 | 261 | 7 | 2 | 557 | 239 | 834 | 0.0 | 549 |
| MsG0880042642.01.T01 | MTR_3g081130 | 46.958 | 641 | 242 | 11 | 1 | 557 | 232 | 858 | 0.0 | 546 |
| MsG0880042642.01.T01 | MTR_3g081130 | 46.958 | 641 | 242 | 11 | 1 | 557 | 160 | 786 | 0.0 | 546 |
| MsG0880042642.01.T01 | MTR_8g018730 | 48.625 | 582 | 226 | 7 | 48 | 557 | 4 | 584 | 0.0 | 531 |
| MsG0880042642.01.T01 | MTR_1g083020 | 46.625 | 637 | 255 | 11 | 2 | 557 | 226 | 858 | 2.41e-177 | 523 |
| MsG0880042642.01.T01 | MTR_1g104650 | 43.546 | 643 | 273 | 11 | 1 | 557 | 218 | 856 | 5.44e-176 | 519 |
| MsG0880042642.01.T01 | MTR_8g020970 | 38.185 | 639 | 304 | 13 | 2 | 556 | 295 | 926 | 2.25e-127 | 395 |
| MsG0880042642.01.T01 | MTR_4g066170 | 37.206 | 637 | 313 | 13 | 2 | 557 | 276 | 906 | 4.37e-119 | 373 |
| MsG0880042642.01.T01 | MTR_3g479460 | 37.559 | 639 | 309 | 16 | 2 | 557 | 272 | 903 | 8.99e-117 | 367 |
| MsG0880042642.01.T01 | MTR_8g080230 | 36.364 | 638 | 319 | 15 | 2 | 557 | 284 | 916 | 3.36e-113 | 358 |
| MsG0880042642.01.T01 | MTR_3g079450 | 36.817 | 641 | 311 | 15 | 2 | 557 | 271 | 902 | 5.95e-109 | 347 |
| MsG0880042642.01.T01 | MTR_4g088810 | 33.874 | 617 | 338 | 10 | 2 | 556 | 286 | 894 | 2.84e-103 | 331 |
| MsG0880042642.01.T01 | MTR_6g452500 | 31.561 | 602 | 331 | 10 | 15 | 540 | 9 | 605 | 2.40e-98 | 311 |
| MsG0880042642.01.T01 | MTR_8g011340 | 31.553 | 599 | 320 | 10 | 2 | 518 | 238 | 828 | 1.26e-95 | 310 |
| MsG0880042642.01.T01 | MTR_3g079420 | 37.188 | 640 | 311 | 17 | 2 | 557 | 233 | 865 | 3.18e-95 | 309 |
| MsG0880042642.01.T01 | MTR_8g018735 | 44.828 | 377 | 159 | 6 | 2 | 330 | 240 | 615 | 3.22e-93 | 298 |
| MsG0880042642.01.T01 | MTR_3g079450 | 36.082 | 388 | 181 | 12 | 2 | 330 | 271 | 650 | 1.19e-51 | 187 |
| MsG0880042642.01.T01 | MTR_8g020970 | 34.704 | 389 | 187 | 11 | 2 | 330 | 295 | 676 | 1.02e-50 | 185 |
| MsG0880042642.01.T01 | MTR_7g012030 | 61.261 | 111 | 42 | 1 | 233 | 342 | 85 | 195 | 4.08e-38 | 139 |
| MsG0880042642.01.T01 | MTR_6g046330 | 54.918 | 122 | 43 | 2 | 233 | 342 | 75 | 196 | 1.33e-32 | 127 |
| MsG0880042642.01.T01 | MTR_4g088805 | 41.758 | 91 | 53 | 0 | 466 | 556 | 1 | 91 | 2.20e-15 | 72.0 |
| MsG0880042642.01.T01 | MTR_7g113408 | 47.059 | 68 | 35 | 1 | 444 | 511 | 3 | 69 | 7.93e-13 | 65.1 |
| MsG0880042642.01.T01 | MTR_3g107560 | 26.887 | 212 | 98 | 6 | 348 | 557 | 18 | 174 | 3.97e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042642.01.T01 | AT1G55020 | 46.166 | 639 | 256 | 13 | 2 | 557 | 226 | 859 | 0.0 | 532 |
| MsG0880042642.01.T01 | AT3G22400 | 43.857 | 643 | 271 | 11 | 1 | 557 | 248 | 886 | 2.55e-177 | 523 |
| MsG0880042642.01.T01 | AT1G17420 | 37.165 | 635 | 318 | 11 | 1 | 557 | 288 | 919 | 8.47e-127 | 394 |
| MsG0880042642.01.T01 | AT1G72520 | 36.520 | 638 | 319 | 11 | 1 | 557 | 294 | 926 | 1.68e-124 | 388 |
| MsG0880042642.01.T01 | AT1G67560 | 37.288 | 649 | 301 | 20 | 2 | 557 | 282 | 917 | 2.78e-115 | 363 |
| MsG0880042642.01.T01 | AT3G45140 | 36.751 | 634 | 317 | 13 | 2 | 557 | 127 | 754 | 3.36e-114 | 356 |
| MsG0880042642.01.T01 | AT3G45140 | 36.751 | 634 | 317 | 13 | 2 | 557 | 269 | 896 | 8.96e-113 | 356 |
Find 127 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCATGCAGCTGTTAATTT+TGG | 0.155837 | 8:-11862773 | MsG0880042642.01.T01:CDS |
| CGAACACCATGTGGAGATTT+TGG | 0.181268 | 8:+11863050 | None:intergenic |
| CTTCTGATGTTTACAAGGAT+TGG | 0.312601 | 8:-11863455 | MsG0880042642.01.T01:CDS |
| ATTCCGAGCTCCAAGCATTC+TGG | 0.322998 | 8:-11862913 | MsG0880042642.01.T01:CDS |
| TTCTGATGTTTACAAGGATT+GGG | 0.340097 | 8:-11863454 | MsG0880042642.01.T01:CDS |
| CAGTTAGTTCAAATGGATAT+TGG | 0.350774 | 8:+11863927 | None:intergenic |
| GTAGAGGCCTTCAAGAAGTT+TGG | 0.353077 | 8:-11862500 | MsG0880042642.01.T01:CDS |
| CTTCTTTCCAAACTTCTTGA+AGG | 0.355360 | 8:+11862493 | None:intergenic |
| TACTCAGGGGTTCCTTTCTC+AGG | 0.359231 | 8:+11862692 | None:intergenic |
| TCTCATCAAAGGAACCATAA+TGG | 0.364794 | 8:-11864055 | MsG0880042642.01.T01:CDS |
| GCATCAACACCTTCACTTGC+AGG | 0.367012 | 8:+11863854 | None:intergenic |
| CATTCATCATAGCAACAAAT+AGG | 0.380660 | 8:-11863629 | MsG0880042642.01.T01:CDS |
| GGCGAGTAAGTAGTAGTAAC+AGG | 0.390438 | 8:+11863875 | None:intergenic |
| ACGATGAATTATTGAGAAAC+AGG | 0.394396 | 8:-11862433 | MsG0880042642.01.T01:CDS |
| ACAGAATCGAAGGTGATCTT+TGG | 0.396552 | 8:-11862541 | MsG0880042642.01.T01:CDS |
| AATGTGGAAGTAATAGTTTA+TGG | 0.399246 | 8:+11863583 | None:intergenic |
| CAAGTTCTTTCCAGAATGCT+TGG | 0.406750 | 8:+11862903 | None:intergenic |
| ATAGAGTCAACATACTTGTT+TGG | 0.412358 | 8:-11863498 | MsG0880042642.01.T01:CDS |
| CAAGAAGTTTGGAAAGAAGT+TGG | 0.414172 | 8:-11862489 | MsG0880042642.01.T01:CDS |
| CTGCCAGTTCTTACCCTTCG+AGG | 0.415657 | 8:+11864883 | None:intergenic |
| ATATTGAGATATTGCTTTGA+GGG | 0.416588 | 8:+11864656 | None:intergenic |
| CTTGTTTGGAAGTTATTCAA+TGG | 0.417879 | 8:-11863484 | MsG0880042642.01.T01:CDS |
| CTTTATCCTTCAAGTGATCC+AGG | 0.419657 | 8:-11862380 | MsG0880042642.01.T01:CDS |
| CTATTTGTTGCTATGATGAA+TGG | 0.420998 | 8:+11863630 | None:intergenic |
| TGTGGCACAGTTAGTTCAAA+TGG | 0.422848 | 8:+11863920 | None:intergenic |
| CCTTGTGAACATGTCTGTTA+TGG | 0.422869 | 8:-11862606 | MsG0880042642.01.T01:CDS |
| TTCTAGATGGAGACACTGTT+GGG | 0.428529 | 8:+11862338 | None:intergenic |
| GGGATGATTAATTCATCTCT+TGG | 0.432545 | 8:+11864708 | None:intergenic |
| TCATTAGGTAGTCCTTGATC+TGG | 0.433138 | 8:+11863426 | None:intergenic |
| AAACTTGCACCACCCTCATA+TGG | 0.434678 | 8:-11862808 | MsG0880042642.01.T01:CDS |
| CCACTCCGACTCTCAGTCTC+TGG | 0.435335 | 8:+11864744 | None:intergenic |
| GAGAACAATCACACCATTGA+AGG | 0.437956 | 8:-11862633 | MsG0880042642.01.T01:CDS |
| AAGGTGTTGATGCTTCAATT+TGG | 0.443695 | 8:-11863844 | MsG0880042642.01.T01:CDS |
| CATATTGAGATATTGCTTTG+AGG | 0.454032 | 8:+11864655 | None:intergenic |
| CATACCAATGGCTGATAAGT+TGG | 0.454432 | 8:+11863777 | None:intergenic |
| GTCAATCCTGGATCACTTGA+AGG | 0.455620 | 8:+11862374 | None:intergenic |
| CCAACACCACTAGTGATTCA+AGG | 0.455799 | 8:-11864528 | MsG0880042642.01.T01:intron |
| CGAGATGTCTTGATCAAAGC+AGG | 0.457710 | 8:-11863528 | MsG0880042642.01.T01:CDS |
| GTTCTTACCCTTCGAGGGTA+AGG | 0.463657 | 8:+11864889 | None:intergenic |
| TTCGCAAGGGAGATAATTGC+TGG | 0.468344 | 8:-11864369 | MsG0880042642.01.T01:CDS |
| GGATGGGGTCAGTGTAGAAC+AGG | 0.470907 | 8:-11864143 | MsG0880042642.01.T01:CDS |
| TGAGCAAGCTCCTCATACTC+AGG | 0.473213 | 8:+11862677 | None:intergenic |
| ACACTGACCCCATCCATGTA+TGG | 0.478220 | 8:+11864151 | None:intergenic |
| GAAGGATAAAGCACAGTGTA+TGG | 0.485574 | 8:+11862392 | None:intergenic |
| AAGCGATAGCACGTCATCAA+AGG | 0.495915 | 8:+11864575 | None:intergenic |
| ATGCCTCTGAAAGTCAATCC+TGG | 0.497159 | 8:+11862362 | None:intergenic |
| TACCTAATGATCTAATCAAA+AGG | 0.497300 | 8:-11863413 | MsG0880042642.01.T01:intron |
| GCTGATAAGTTGGTGATAGC+AGG | 0.497313 | 8:+11863787 | None:intergenic |
| TGAGTATGAGGAGCTTGCTC+AGG | 0.498251 | 8:-11862675 | MsG0880042642.01.T01:CDS |
| TACCCTCGAAGGGTAAGAAC+TGG | 0.500363 | 8:-11864886 | MsG0880042642.01.T01:CDS |
| TTTCTAGATGGAGACACTGT+TGG | 0.501431 | 8:+11862337 | None:intergenic |
| CCTTGAATCACTAGTGGTGT+TGG | 0.502285 | 8:+11864528 | None:intergenic |
| AATTATTGAGAAACAGGAAT+GGG | 0.504581 | 8:-11862427 | MsG0880042642.01.T01:CDS |
| GAAAGGAACCCCTGAGTATG+AGG | 0.506154 | 8:-11862687 | MsG0880042642.01.T01:CDS |
| AAAACAGTTGGAGCCATACA+TGG | 0.508183 | 8:-11864164 | MsG0880042642.01.T01:CDS |
| TGCCAGTTCTTACCCTTCGA+GGG | 0.508691 | 8:+11864884 | None:intergenic |
| TTCAATTTGGAGCCTTGCCA+AGG | 0.509349 | 8:-11863831 | MsG0880042642.01.T01:CDS |
| AACTTCTTGAAGGCCTCTAC+CGG | 0.510825 | 8:+11862503 | None:intergenic |
| TTTCCAGAATGCTTGGAGCT+CGG | 0.513341 | 8:+11862910 | None:intergenic |
| GGAAGTAATAGTTTATGGAT+AGG | 0.513616 | 8:+11863588 | None:intergenic |
| ATTGTCTTCTGATGTTTACA+AGG | 0.514325 | 8:-11863460 | MsG0880042642.01.T01:CDS |
| ATTTATAACAACGTAAGCCT+TGG | 0.515973 | 8:+11863814 | None:intergenic |
| CAGTTGGAGCCATACATGGA+TGG | 0.521909 | 8:-11864160 | MsG0880042642.01.T01:CDS |
| TTGGAGTCTCACATTTCTCA+AGG | 0.522251 | 8:+11864854 | None:intergenic |
| AGAAGATTCATGCCTGAGAA+AGG | 0.522355 | 8:-11862704 | MsG0880042642.01.T01:CDS |
| GGATCAAAACTATCACCATC+AGG | 0.526960 | 8:+11863896 | None:intergenic |
| GTTTCTGATGAGCAATACAT+TGG | 0.527767 | 8:-11862566 | MsG0880042642.01.T01:CDS |
| AGTTGGAGCCATACATGGAT+GGG | 0.529024 | 8:-11864159 | MsG0880042642.01.T01:CDS |
| GAAGTAATAGTTTATGGATA+GGG | 0.530016 | 8:+11863589 | None:intergenic |
| TTCACAAGGGTATCCTTCAA+TGG | 0.532124 | 8:+11862620 | None:intergenic |
| GATCAAGACATCTCGCGCAT+TGG | 0.534033 | 8:+11863536 | None:intergenic |
| GTGCTGAAGCCATCCATATG+AGG | 0.536950 | 8:+11862795 | None:intergenic |
| ATCACCAACTTATCAGCCAT+TGG | 0.538478 | 8:-11863781 | MsG0880042642.01.T01:intron |
| GATCCAGGATTGACTTTCAG+AGG | 0.542922 | 8:-11862365 | MsG0880042642.01.T01:CDS |
| CTGGAAAGAACTTGTAGAAG+TGG | 0.543538 | 8:-11862894 | MsG0880042642.01.T01:CDS |
| CTAACTAGCGATCTTAATTG+AGG | 0.544705 | 8:+11864627 | None:intergenic |
| GAGCAAGCTCCTCATACTCA+GGG | 0.546445 | 8:+11862678 | None:intergenic |
| TGTTACATTTCAACGTTACT+CGG | 0.553692 | 8:-11864113 | MsG0880042642.01.T01:CDS |
| TTGCTTGTTATCTAGAGGAG+TGG | 0.555634 | 8:-11863084 | MsG0880042642.01.T01:intron |
| TTACGATTCAGAGCCGGTAG+AGG | 0.560048 | 8:-11862516 | MsG0880042642.01.T01:CDS |
| CATTAGGTAGTCCTTGATCT+GGG | 0.563331 | 8:+11863427 | None:intergenic |
| CCGCCTTGCCTTACCCTCGA+AGG | 0.564409 | 8:-11864897 | None:intergenic |
| GTTAACAATGTATCCACCGT+AGG | 0.575071 | 8:+11862742 | None:intergenic |
| CGCCTTGCCTTACCCTCGAA+GGG | 0.575072 | 8:-11864896 | None:intergenic |
| AGTGGGCCATGGTGACTTGA+AGG | 0.575612 | 8:-11862876 | MsG0880042642.01.T01:CDS |
| TTCATTGTGTTACGATAATG+TGG | 0.575946 | 8:+11863567 | None:intergenic |
| TTGAGCAAAAGCTCATTGAA+AGG | 0.587750 | 8:-11862460 | MsG0880042642.01.T01:CDS |
| CCATAACAGACATGTTCACA+AGG | 0.591170 | 8:+11862606 | None:intergenic |
| GAGTAGAGGATCGCACTGCA+TGG | 0.591932 | 8:-11864407 | MsG0880042642.01.T01:intron |
| TACATTGGACACAGAATCGA+AGG | 0.598007 | 8:-11862551 | MsG0880042642.01.T01:CDS |
| TCATCAAAGGAGTTAAACTC+TGG | 0.598318 | 8:+11864588 | None:intergenic |
| TTGCACCACCCTCATATGGA+TGG | 0.599493 | 8:-11862804 | MsG0880042642.01.T01:CDS |
| TGACTGATGAGGAATTCGCA+AGG | 0.603045 | 8:-11864383 | MsG0880042642.01.T01:CDS |
| TAACAACGTAAGCCTTGGCA+AGG | 0.609532 | 8:+11863819 | None:intergenic |
| GAATTATTGAGAAACAGGAA+TGG | 0.611194 | 8:-11862428 | MsG0880042642.01.T01:CDS |
| TGGAAAGAACTTGTAGAAGT+GGG | 0.612408 | 8:-11862893 | MsG0880042642.01.T01:CDS |
| GAGATGTCTTGATCAAAGCA+GGG | 0.612806 | 8:-11863527 | MsG0880042642.01.T01:CDS |
| CTAACTGTGCCACATCCTGA+TGG | 0.613840 | 8:-11863911 | MsG0880042642.01.T01:CDS |
| ACTTACTCGCCTGCAAGTGA+AGG | 0.614700 | 8:-11863863 | MsG0880042642.01.T01:CDS |
| AACAAATAGGCATCTTAGTG+TGG | 0.616014 | 8:-11863616 | MsG0880042642.01.T01:CDS |
| CCAGAGACTGAGAGTCGGAG+TGG | 0.616712 | 8:-11864744 | MsG0880042642.01.T01:CDS |
| ACAAAGTCTGACGATTTCTG+AGG | 0.620280 | 8:+11864687 | None:intergenic |
| TGCTGAAGCCATCCATATGA+GGG | 0.621259 | 8:+11862796 | None:intergenic |
| CAAAGTCTGACGATTTCTGA+GGG | 0.622847 | 8:+11864688 | None:intergenic |
| TATATACCTTGAATCACTAG+TGG | 0.627778 | 8:+11864522 | None:intergenic |
| AAACTATCACCATCAGGATG+TGG | 0.627976 | 8:+11863902 | None:intergenic |
| CAGATCCAGAGACTGAGAGT+CGG | 0.630042 | 8:-11864749 | MsG0880042642.01.T01:CDS |
| TTAACAATGTATCCACCGTA+GGG | 0.631802 | 8:+11862743 | None:intergenic |
| GTTGGAGCCATACATGGATG+GGG | 0.637161 | 8:-11864158 | MsG0880042642.01.T01:CDS |
| TACCCTTCGAGGGTAAGGCA+AGG | 0.637538 | 8:+11864894 | None:intergenic |
| TTGGACTTACGATTCAGAGC+CGG | 0.639731 | 8:-11862522 | MsG0880042642.01.T01:CDS |
| GACTGATGAGGAATTCGCAA+GGG | 0.645675 | 8:-11864382 | MsG0880042642.01.T01:CDS |
| GCTTGCTCAGGACTACGAGA+AGG | 0.646968 | 8:-11862663 | MsG0880042642.01.T01:CDS |
| TTTGGACAATATCCCTACGG+TGG | 0.647144 | 8:-11862755 | MsG0880042642.01.T01:CDS |
| ACTAGTGGTGTTGGAAACTG+TGG | 0.662217 | 8:+11864537 | None:intergenic |
| AGATGTCTTGATCAAAGCAG+GGG | 0.672101 | 8:-11863526 | MsG0880042642.01.T01:CDS |
| TTGCATCCTTCAAGTCACCA+TGG | 0.680493 | 8:+11862870 | None:intergenic |
| GAACTTGTAGAAGTGGGCCA+TGG | 0.691948 | 8:-11862887 | MsG0880042642.01.T01:CDS |
| CACTGCATGGATGACTGATG+AGG | 0.693276 | 8:-11864394 | MsG0880042642.01.T01:CDS |
| GTGACTTGAAGGATGCAACA+TGG | 0.696829 | 8:-11862865 | MsG0880042642.01.T01:CDS |
| AAGTATCCAAAATCTCCACA+TGG | 0.699781 | 8:-11863056 | MsG0880042642.01.T01:intron |
| AGCAAGCTCCTCATACTCAG+GGG | 0.707816 | 8:+11862679 | None:intergenic |
| AGTGGTGTTGGAAACTGTGG+AGG | 0.712622 | 8:+11864540 | None:intergenic |
| TGAAGCCATCCATATGAGGG+TGG | 0.720210 | 8:+11862799 | None:intergenic |
| GATGTCTTGATCAAAGCAGG+GGG | 0.724031 | 8:-11863525 | MsG0880042642.01.T01:CDS |
| CATAACAGACATGTTCACAA+GGG | 0.729060 | 8:+11862607 | None:intergenic |
| ACTTGAAGGATGCAACATGG+TGG | 0.759337 | 8:-11862862 | MsG0880042642.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACTTTATATTTTTATTAGA+TGG | - | Chr8:11864043-11864062 | MsG0880042642.01.T01:CDS | 10.0% |
| !! | ACAAAAAATACTAAAAAAGA+TGG | + | Chr8:11864110-11864129 | None:intergenic | 15.0% |
| !!! | AGAATAAAATTTTTCCATTA+TGG | + | Chr8:11863194-11863213 | None:intergenic | 15.0% |
| !! | AAAATACTAAAAAAGATGGA+AGG | + | Chr8:11864106-11864125 | None:intergenic | 20.0% |
| !! | AAATACTAAAAAAGATGGAA+GGG | + | Chr8:11864105-11864124 | None:intergenic | 20.0% |
| !! | AATAATGAAATTCATACCAA+TGG | + | Chr8:11863470-11863489 | None:intergenic | 20.0% |
| !! | TTAAATATATTGTTAGGACT+AGG | + | Chr8:11862749-11862768 | None:intergenic | 20.0% |
| !! | TTTCATGCTACATTTATAAT+TGG | - | Chr8:11862991-11863010 | MsG0880042642.01.T01:intron | 20.0% |
| !!! | AAAATTTTATTCTGTCTAAC+AGG | - | Chr8:11863201-11863220 | MsG0880042642.01.T01:intron | 20.0% |
| !!! | AGATCAATGTATTCTAAAAA+TGG | + | Chr8:11863877-11863896 | None:intergenic | 20.0% |
| ! | AAATTTCTTACTATGAGTAG+AGG | - | Chr8:11862811-11862830 | MsG0880042642.01.T01:CDS | 25.0% |
| ! | AATCAAGTACGTATAATCTA+AGG | + | Chr8:11863237-11863256 | None:intergenic | 25.0% |
| ! | AATCATATAAAGAAAGCTCA+TGG | - | Chr8:11862779-11862798 | MsG0880042642.01.T01:CDS | 25.0% |
| ! | AATGTGGAAGTAATAGTTTA+TGG | + | Chr8:11863652-11863671 | None:intergenic | 25.0% |
| ! | AATTATTGAGAAACAGGAAT+GGG | - | Chr8:11864805-11864824 | MsG0880042642.01.T01:intron | 25.0% |
| ! | ATATTGAGATATTGCTTTGA+GGG | + | Chr8:11862579-11862598 | None:intergenic | 25.0% |
| ! | GAAGTAATAGTTTATGGATA+GGG | + | Chr8:11863646-11863665 | None:intergenic | 25.0% |
| ! | TACCTAATGATCTAATCAAA+AGG | - | Chr8:11863819-11863838 | MsG0880042642.01.T01:CDS | 25.0% |
| ! | TGAGAAAAACTGAATTCAAA+TGG | + | Chr8:11863162-11863181 | None:intergenic | 25.0% |
| !! | AATTCAGTTTTTCTCATCAA+AGG | - | Chr8:11863166-11863185 | MsG0880042642.01.T01:intron | 25.0% |
| !! | ATTTTGTAACTGTTGTTGAA+AGG | + | Chr8:11864078-11864097 | None:intergenic | 25.0% |
| !! | CGAAGAAGTAATAATTTGTA+AGG | + | Chr8:11863848-11863867 | None:intergenic | 25.0% |
| !!! | GCATTTATTTTCCTCAAATA+TGG | + | Chr8:11863277-11863296 | None:intergenic | 25.0% |
| !!! | TACCTTTTGATTAGATCATT+AGG | + | Chr8:11863824-11863843 | None:intergenic | 25.0% |
| AAACGTCATCAAAAAAGTTG+GGG | - | Chr8:11862895-11862914 | MsG0880042642.01.T01:CDS | 30.0% | |
| AAGGATAATCCTCTATCAAA+AGG | + | Chr8:11864208-11864227 | None:intergenic | 30.0% | |
| AATATGGTAAGATTGCATCA+TGG | + | Chr8:11863261-11863280 | None:intergenic | 30.0% | |
| ACGATGAATTATTGAGAAAC+AGG | - | Chr8:11864799-11864818 | MsG0880042642.01.T01:intron | 30.0% | |
| ATAGAGTCAACATACTTGTT+TGG | - | Chr8:11863734-11863753 | MsG0880042642.01.T01:intron | 30.0% | |
| ATGCAATCTTACCATATTTG+AGG | - | Chr8:11863263-11863282 | MsG0880042642.01.T01:intron | 30.0% | |
| ATTGTCTTCTGATGTTTACA+AGG | - | Chr8:11863772-11863791 | MsG0880042642.01.T01:intron | 30.0% | |
| ATTTATAACAACGTAAGCCT+TGG | + | Chr8:11863421-11863440 | None:intergenic | 30.0% | |
| CAAACGTCATCAAAAAAGTT+GGG | - | Chr8:11862894-11862913 | MsG0880042642.01.T01:CDS | 30.0% | |
| CAGAATAACCAAAAAACAGT+TGG | - | Chr8:11863056-11863075 | MsG0880042642.01.T01:intron | 30.0% | |
| CAGTTAGTTCAAATGGATAT+TGG | + | Chr8:11863308-11863327 | None:intergenic | 30.0% | |
| CATATTGAGATATTGCTTTG+AGG | + | Chr8:11862580-11862599 | None:intergenic | 30.0% | |
| CATTCATCATAGCAACAAAT+AGG | - | Chr8:11863603-11863622 | MsG0880042642.01.T01:CDS | 30.0% | |
| CTTGTTTGGAAGTTATTCAA+TGG | - | Chr8:11863748-11863767 | MsG0880042642.01.T01:intron | 30.0% | |
| GAATTATTGAGAAACAGGAA+TGG | - | Chr8:11864804-11864823 | MsG0880042642.01.T01:intron | 30.0% | |
| GGAAGTAATAGTTTATGGAT+AGG | + | Chr8:11863647-11863666 | None:intergenic | 30.0% | |
| GTTTATTCTCTATTGCTCTA+AGG | + | Chr8:11863960-11863979 | None:intergenic | 30.0% | |
| TATATACCTTGAATCACTAG+TGG | + | Chr8:11862713-11862732 | None:intergenic | 30.0% | |
| TATATATCTACATGTGTGAC+AGG | - | Chr8:11863555-11863574 | MsG0880042642.01.T01:CDS | 30.0% | |
| TGTTACATTTCAACGTTACT+CGG | - | Chr8:11863119-11863138 | MsG0880042642.01.T01:intron | 30.0% | |
| TTCATTGTGTTACGATAATG+TGG | + | Chr8:11863668-11863687 | None:intergenic | 30.0% | |
| TTCTGATGTTTACAAGGATT+GGG | - | Chr8:11863778-11863797 | MsG0880042642.01.T01:intron | 30.0% | |
| ! | AATTTTGGACAATATCCCTA+CGG | - | Chr8:11864474-11864493 | MsG0880042642.01.T01:intron | 30.0% |
| ! | CTATTTGTTGCTATGATGAA+TGG | + | Chr8:11863605-11863624 | None:intergenic | 30.0% |
| !! | ATGAATCTTCTGCTTTTAGT+TGG | + | Chr8:11864519-11864538 | None:intergenic | 30.0% |
| !!! | CAACTGTTTTTTGGTTATTC+TGG | + | Chr8:11863058-11863077 | None:intergenic | 30.0% |
| AACAAATAGGCATCTTAGTG+TGG | - | Chr8:11863616-11863635 | MsG0880042642.01.T01:CDS | 35.0% | |
| AAGTATCCAAAATCTCCACA+TGG | - | Chr8:11864176-11864195 | MsG0880042642.01.T01:CDS | 35.0% | |
| ATTAGACATAGCAACCAATG+CGG | + | Chr8:11863024-11863043 | None:intergenic | 35.0% | |
| CAAGAAGTTTGGAAAGAAGT+TGG | - | Chr8:11864743-11864762 | MsG0880042642.01.T01:CDS | 35.0% | |
| CATAACAGACATGTTCACAA+GGG | + | Chr8:11864628-11864647 | None:intergenic | 35.0% | |
| CATCTAGACTAACATCTCAT+GGG | + | Chr8:11863918-11863937 | None:intergenic | 35.0% | |
| CCAAACGTCATCAAAAAAGT+TGG | - | Chr8:11862893-11862912 | MsG0880042642.01.T01:CDS | 35.0% | |
| CTAACTAGCGATCTTAATTG+AGG | + | Chr8:11862608-11862627 | None:intergenic | 35.0% | |
| CTTCTGATGTTTACAAGGAT+TGG | - | Chr8:11863777-11863796 | MsG0880042642.01.T01:intron | 35.0% | |
| CTTCTTTCCAAACTTCTTGA+AGG | + | Chr8:11864742-11864761 | None:intergenic | 35.0% | |
| GATTATCCTTATGCTACTGA+TGG | - | Chr8:11864218-11864237 | MsG0880042642.01.T01:intron | 35.0% | |
| GGGATGATTAATTCATCTCT+TGG | + | Chr8:11862527-11862546 | None:intergenic | 35.0% | |
| GTTTCTGATGAGCAATACAT+TGG | - | Chr8:11864666-11864685 | MsG0880042642.01.T01:CDS | 35.0% | |
| TCATCAAAGGAGTTAAACTC+TGG | + | Chr8:11862647-11862666 | None:intergenic | 35.0% | |
| TCTCATCAAAGGAACCATAA+TGG | - | Chr8:11863177-11863196 | MsG0880042642.01.T01:intron | 35.0% | |
| TGGAAAGAACTTGTAGAAGT+GGG | - | Chr8:11864339-11864358 | MsG0880042642.01.T01:CDS | 35.0% | |
| TTAACAATGTATCCACCGTA+GGG | + | Chr8:11864492-11864511 | None:intergenic | 35.0% | |
| TTGAGCAAAAGCTCATTGAA+AGG | - | Chr8:11864772-11864791 | MsG0880042642.01.T01:intron | 35.0% | |
| ! | CTTCATGCAGCTGTTAATTT+TGG | - | Chr8:11864459-11864478 | MsG0880042642.01.T01:intron | 35.0% |
| ! | TAATTGGTAACTAACCGCAT+TGG | - | Chr8:11863007-11863026 | MsG0880042642.01.T01:intron | 35.0% |
| !! | AAGGTGTTGATGCTTCAATT+TGG | - | Chr8:11863388-11863407 | MsG0880042642.01.T01:intron | 35.0% |
| !! | ATCTTCTGCTTTTAGTTGGT+CGG | + | Chr8:11864515-11864534 | None:intergenic | 35.0% |
| !! | CTTCTTTGCTTGTTATCTAG+AGG | - | Chr8:11864143-11864162 | MsG0880042642.01.T01:CDS | 35.0% |
| !! | TACTGATGGACTAGAGATAT+GGG | - | Chr8:11864232-11864251 | MsG0880042642.01.T01:intron | 35.0% |
| !!! | CCAACTTTTTTGATGACGTT+TGG | + | Chr8:11862896-11862915 | None:intergenic | 35.0% |
| AAAACAGTTGGAGCCATACA+TGG | - | Chr8:11863068-11863087 | MsG0880042642.01.T01:CDS | 40.0% | |
| AAACTATCACCATCAGGATG+TGG | + | Chr8:11863333-11863352 | None:intergenic | 40.0% | |
| ACAAAGTCTGACGATTTCTG+AGG | + | Chr8:11862548-11862567 | None:intergenic | 40.0% | |
| ACAGAATCGAAGGTGATCTT+TGG | - | Chr8:11864691-11864710 | MsG0880042642.01.T01:CDS | 40.0% | |
| AGAAGATTCATGCCTGAGAA+AGG | - | Chr8:11864528-11864547 | MsG0880042642.01.T01:intron | 40.0% | |
| AGATGTCTTGATCAAAGCAG+GGG | - | Chr8:11863706-11863725 | MsG0880042642.01.T01:intron | 40.0% | |
| ATCACCAACTTATCAGCCAT+TGG | - | Chr8:11863451-11863470 | MsG0880042642.01.T01:CDS | 40.0% | |
| CAAAGTCTGACGATTTCTGA+GGG | + | Chr8:11862547-11862566 | None:intergenic | 40.0% | |
| CAAGTTCTTTCCAGAATGCT+TGG | + | Chr8:11864332-11864351 | None:intergenic | 40.0% | |
| CATACCAATGGCTGATAAGT+TGG | + | Chr8:11863458-11863477 | None:intergenic | 40.0% | |
| CATTAGGTAGTCCTTGATCT+GGG | + | Chr8:11863808-11863827 | None:intergenic | 40.0% | |
| CCATAACAGACATGTTCACA+AGG | + | Chr8:11864629-11864648 | None:intergenic | 40.0% | |
| CCTTGTGAACATGTCTGTTA+TGG | - | Chr8:11864626-11864645 | MsG0880042642.01.T01:CDS | 40.0% | |
| CTGGAAAGAACTTGTAGAAG+TGG | - | Chr8:11864338-11864357 | MsG0880042642.01.T01:CDS | 40.0% | |
| CTTTATCCTTCAAGTGATCC+AGG | - | Chr8:11864852-11864871 | MsG0880042642.01.T01:intron | 40.0% | |
| GAAGGATAAAGCACAGTGTA+TGG | + | Chr8:11864843-11864862 | None:intergenic | 40.0% | |
| GAGAACAATCACACCATTGA+AGG | - | Chr8:11864599-11864618 | MsG0880042642.01.T01:CDS | 40.0% | |
| GAGATGTCTTGATCAAAGCA+GGG | - | Chr8:11863705-11863724 | MsG0880042642.01.T01:intron | 40.0% | |
| GCATCTAGACTAACATCTCA+TGG | + | Chr8:11863919-11863938 | None:intergenic | 40.0% | |
| GGATCAAAACTATCACCATC+AGG | + | Chr8:11863339-11863358 | None:intergenic | 40.0% | |
| GTTAACAATGTATCCACCGT+AGG | + | Chr8:11864493-11864512 | None:intergenic | 40.0% | |
| TACATTGGACACAGAATCGA+AGG | - | Chr8:11864681-11864700 | MsG0880042642.01.T01:CDS | 40.0% | |
| TCATTAGGTAGTCCTTGATC+TGG | + | Chr8:11863809-11863828 | None:intergenic | 40.0% | |
| TCTAGTCCATCAGTAGCATA+AGG | + | Chr8:11864227-11864246 | None:intergenic | 40.0% | |
| TGCAAACAGACACAAGTGTT+TGG | + | Chr8:11862400-11862419 | None:intergenic | 40.0% | |
| TGTGGCACAGTTAGTTCAAA+TGG | + | Chr8:11863315-11863334 | None:intergenic | 40.0% | |
| TTGGAGTCTCACATTTCTCA+AGG | + | Chr8:11862381-11862400 | None:intergenic | 40.0% | |
| ! | TAGAGATATGGGCTGCTATT+AGG | - | Chr8:11864243-11864262 | MsG0880042642.01.T01:intron | 40.0% |
| !! | CTACTGATGGACTAGAGATA+TGG | - | Chr8:11864231-11864250 | MsG0880042642.01.T01:intron | 40.0% |
| !! | TTCACAAGGGTATCCTTCAA+TGG | + | Chr8:11864615-11864634 | None:intergenic | 40.0% |
| !! | TTGCTTGTTATCTAGAGGAG+TGG | - | Chr8:11864148-11864167 | MsG0880042642.01.T01:CDS | 40.0% |
| !!! | GTATGGCTCCAACTGTTTTT+TGG | + | Chr8:11863067-11863086 | None:intergenic | 40.0% |
| AAACTTGCACCACCCTCATA+TGG | - | Chr8:11864424-11864443 | MsG0880042642.01.T01:intron | 45.0% | |
| AACTTCTTGAAGGCCTCTAC+CGG | + | Chr8:11864732-11864751 | None:intergenic | 45.0% | |
| AAGCGATAGCACGTCATCAA+AGG | + | Chr8:11862660-11862679 | None:intergenic | 45.0% | |
| ACTTGAAGGATGCAACATGG+TGG | - | Chr8:11864370-11864389 | MsG0880042642.01.T01:CDS | 45.0% | |
| AGTTGGAGCCATACATGGAT+GGG | - | Chr8:11863073-11863092 | MsG0880042642.01.T01:intron | 45.0% | |
| ATCAAAAGGCGAACACCATG+TGG | + | Chr8:11864194-11864213 | None:intergenic | 45.0% | |
| CCAACACCACTAGTGATTCA+AGG | - | Chr8:11862704-11862723 | MsG0880042642.01.T01:CDS | 45.0% | |
| CCTTGAATCACTAGTGGTGT+TGG | + | Chr8:11862707-11862726 | None:intergenic | 45.0% | |
| CGAGATGTCTTGATCAAAGC+AGG | - | Chr8:11863704-11863723 | MsG0880042642.01.T01:intron | 45.0% | |
| GACTGATGAGGAATTCGCAA+GGG | - | Chr8:11862850-11862869 | MsG0880042642.01.T01:CDS | 45.0% | |
| GATGTCTTGATCAAAGCAGG+GGG | - | Chr8:11863707-11863726 | MsG0880042642.01.T01:intron | 45.0% | |
| GGCGAGTAAGTAGTAGTAAC+AGG | + | Chr8:11863360-11863379 | None:intergenic | 45.0% | |
| GTAGAGGCCTTCAAGAAGTT+TGG | - | Chr8:11864732-11864751 | MsG0880042642.01.T01:CDS | 45.0% | |
| GTCAATCCTGGATCACTTGA+AGG | + | Chr8:11864861-11864880 | None:intergenic | 45.0% | |
| GTGACTTGAAGGATGCAACA+TGG | - | Chr8:11864367-11864386 | MsG0880042642.01.T01:CDS | 45.0% | |
| TAACAACGTAAGCCTTGGCA+AGG | + | Chr8:11863416-11863435 | None:intergenic | 45.0% | |
| TGACTGATGAGGAATTCGCA+AGG | - | Chr8:11862849-11862868 | MsG0880042642.01.T01:CDS | 45.0% | |
| TGCTGAAGCCATCCATATGA+GGG | + | Chr8:11864439-11864458 | None:intergenic | 45.0% | |
| TTCGCAAGGGAGATAATTGC+TGG | - | Chr8:11862863-11862882 | MsG0880042642.01.T01:CDS | 45.0% | |
| TTGCATCCTTCAAGTCACCA+TGG | + | Chr8:11864365-11864384 | None:intergenic | 45.0% | |
| TTGGACTTACGATTCAGAGC+CGG | - | Chr8:11864710-11864729 | MsG0880042642.01.T01:CDS | 45.0% | |
| TTTCCAGAATGCTTGGAGCT+CGG | + | Chr8:11864325-11864344 | None:intergenic | 45.0% | |
| TTTGGACAATATCCCTACGG+TGG | - | Chr8:11864477-11864496 | MsG0880042642.01.T01:intron | 45.0% | |
| ! | ACTAGTGGTGTTGGAAACTG+TGG | + | Chr8:11862698-11862717 | None:intergenic | 45.0% |
| ! | ATGCCTCTGAAAGTCAATCC+TGG | + | Chr8:11864873-11864892 | None:intergenic | 45.0% |
| ! | CGAACACCATGTGGAGATTT+TGG | + | Chr8:11864185-11864204 | None:intergenic | 45.0% |
| ! | GATCCAGGATTGACTTTCAG+AGG | - | Chr8:11864867-11864886 | MsG0880042642.01.T01:CDS | 45.0% |
| ! | GATTGGGTTTTCCCAGATCA+AGG | - | Chr8:11863794-11863813 | MsG0880042642.01.T01:CDS | 45.0% |
| ! | TATGGGCTGCTATTAGGTCA+TGG | - | Chr8:11864249-11864268 | MsG0880042642.01.T01:intron | 45.0% |
| ! | TGGTGTTCGCCTTTTGATAG+AGG | - | Chr8:11864196-11864215 | MsG0880042642.01.T01:intron | 45.0% |
| ! | TTCAATTTGGAGCCTTGCCA+AGG | - | Chr8:11863401-11863420 | MsG0880042642.01.T01:intron | 45.0% |
| !! | GCTGATAAGTTGGTGATAGC+AGG | + | Chr8:11863448-11863467 | None:intergenic | 45.0% |
| !! | ATATAATTAAATATATTGTT+AGG | + | Chr8:11862755-11862774 | None:intergenic | 5.0% |
| ACACTGACCCCATCCATGTA+TGG | + | Chr8:11863084-11863103 | None:intergenic | 50.0% | |
| ACTTACTCGCCTGCAAGTGA+AGG | - | Chr8:11863369-11863388 | MsG0880042642.01.T01:intron | 50.0% | |
| AGCAAGCTCCTCATACTCAG+GGG | + | Chr8:11864556-11864575 | None:intergenic | 50.0% | |
| ATTCCGAGCTCCAAGCATTC+TGG | - | Chr8:11864319-11864338 | MsG0880042642.01.T01:intron | 50.0% | |
| CACTGCATGGATGACTGATG+AGG | - | Chr8:11862838-11862857 | MsG0880042642.01.T01:CDS | 50.0% | |
| CAGATCCAGAGACTGAGAGT+CGG | - | Chr8:11862483-11862502 | MsG0880042642.01.T01:CDS | 50.0% | |
| CAGTTGGAGCCATACATGGA+TGG | - | Chr8:11863072-11863091 | MsG0880042642.01.T01:CDS | 50.0% | |
| CTAACTGTGCCACATCCTGA+TGG | - | Chr8:11863321-11863340 | MsG0880042642.01.T01:intron | 50.0% | |
| GAAAGGAACCCCTGAGTATG+AGG | - | Chr8:11864545-11864564 | MsG0880042642.01.T01:CDS | 50.0% | |
| GAACTTGTAGAAGTGGGCCA+TGG | - | Chr8:11864345-11864364 | MsG0880042642.01.T01:CDS | 50.0% | |
| GAGCAAGCTCCTCATACTCA+GGG | + | Chr8:11864557-11864576 | None:intergenic | 50.0% | |
| GATCAAGACATCTCGCGCAT+TGG | + | Chr8:11863699-11863718 | None:intergenic | 50.0% | |
| GCATCAACACCTTCACTTGC+AGG | + | Chr8:11863381-11863400 | None:intergenic | 50.0% | |
| GTGCTGAAGCCATCCATATG+AGG | + | Chr8:11864440-11864459 | None:intergenic | 50.0% | |
| GTTCTTACCCTTCGAGGGTA+AGG | + | Chr8:11862346-11862365 | None:intergenic | 50.0% | |
| GTTGGAGCCATACATGGATG+GGG | - | Chr8:11863074-11863093 | MsG0880042642.01.T01:intron | 50.0% | |
| TACCCTCGAAGGGTAAGAAC+TGG | - | Chr8:11862346-11862365 | MsG0880042642.01.T01:CDS | 50.0% | |
| TACTCAGGGGTTCCTTTCTC+AGG | + | Chr8:11864543-11864562 | None:intergenic | 50.0% | |
| TGAAGCCATCCATATGAGGG+TGG | + | Chr8:11864436-11864455 | None:intergenic | 50.0% | |
| TGAGCAAGCTCCTCATACTC+AGG | + | Chr8:11864558-11864577 | None:intergenic | 50.0% | |
| TGCCAGTTCTTACCCTTCGA+GGG | + | Chr8:11862351-11862370 | None:intergenic | 50.0% | |
| TTACGATTCAGAGCCGGTAG+AGG | - | Chr8:11864716-11864735 | MsG0880042642.01.T01:CDS | 50.0% | |
| TTGCACCACCCTCATATGGA+TGG | - | Chr8:11864428-11864447 | MsG0880042642.01.T01:intron | 50.0% | |
| ! | AGTGGTGTTGGAAACTGTGG+AGG | + | Chr8:11862695-11862714 | None:intergenic | 50.0% |
| ! | TGAGTATGAGGAGCTTGCTC+AGG | - | Chr8:11864557-11864576 | MsG0880042642.01.T01:CDS | 50.0% |
| AGTGGGCCATGGTGACTTGA+AGG | - | Chr8:11864356-11864375 | MsG0880042642.01.T01:CDS | 55.0% | |
| CTGCCAGTTCTTACCCTTCG+AGG | + | Chr8:11862352-11862371 | None:intergenic | 55.0% | |
| GAGTAGAGGATCGCACTGCA+TGG | - | Chr8:11862825-11862844 | MsG0880042642.01.T01:CDS | 55.0% | |
| GCTTGCTCAGGACTACGAGA+AGG | - | Chr8:11864569-11864588 | MsG0880042642.01.T01:CDS | 55.0% | |
| GGATGGGGTCAGTGTAGAAC+AGG | - | Chr8:11863089-11863108 | MsG0880042642.01.T01:intron | 55.0% | |
| !! | GACGTGCTATCGCTTTTCGC+TGG | - | Chr8:11862665-11862684 | MsG0880042642.01.T01:CDS | 55.0% |
| CCACTCCGACTCTCAGTCTC+TGG | + | Chr8:11862491-11862510 | None:intergenic | 60.0% | |
| CCAGAGACTGAGAGTCGGAG+TGG | - | Chr8:11862488-11862507 | MsG0880042642.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 11862340 | 11864914 | 11862340 | ID=MsG0880042642.01;Name=MsG0880042642.01 |
| Chr8 | mRNA | 11862340 | 11864914 | 11862340 | ID=MsG0880042642.01.T01;Parent=MsG0880042642.01;Name=MsG0880042642.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|8|0|557 |
| Chr8 | exon | 11864866 | 11864914 | 11864866 | ID=MsG0880042642.01.T01:exon:3590;Parent=MsG0880042642.01.T01 |
| Chr8 | exon | 11864529 | 11864768 | 11864529 | ID=MsG0880042642.01.T01:exon:3589;Parent=MsG0880042642.01.T01 |
| Chr8 | exon | 11864338 | 11864423 | 11864338 | ID=MsG0880042642.01.T01:exon:3588;Parent=MsG0880042642.01.T01 |
| Chr8 | exon | 11864025 | 11864206 | 11864025 | ID=MsG0880042642.01.T01:exon:3587;Parent=MsG0880042642.01.T01 |
| Chr8 | exon | 11863782 | 11863949 | 11863782 | ID=MsG0880042642.01.T01:exon:3586;Parent=MsG0880042642.01.T01 |
| Chr8 | exon | 11863414 | 11863677 | 11863414 | ID=MsG0880042642.01.T01:exon:3585;Parent=MsG0880042642.01.T01 |
| Chr8 | exon | 11863057 | 11863091 | 11863057 | ID=MsG0880042642.01.T01:exon:3584;Parent=MsG0880042642.01.T01 |
| Chr8 | exon | 11862340 | 11862989 | 11862340 | ID=MsG0880042642.01.T01:exon:3583;Parent=MsG0880042642.01.T01 |
| Chr8 | CDS | 11864866 | 11864914 | 11864866 | ID=MsG0880042642.01.T01:cds;Parent=MsG0880042642.01.T01 |
| Chr8 | CDS | 11864529 | 11864768 | 11864529 | ID=MsG0880042642.01.T01:cds;Parent=MsG0880042642.01.T01 |
| Chr8 | CDS | 11864338 | 11864423 | 11864338 | ID=MsG0880042642.01.T01:cds;Parent=MsG0880042642.01.T01 |
| Chr8 | CDS | 11864025 | 11864206 | 11864025 | ID=MsG0880042642.01.T01:cds;Parent=MsG0880042642.01.T01 |
| Chr8 | CDS | 11863782 | 11863949 | 11863782 | ID=MsG0880042642.01.T01:cds;Parent=MsG0880042642.01.T01 |
| Chr8 | CDS | 11863414 | 11863677 | 11863414 | ID=MsG0880042642.01.T01:cds;Parent=MsG0880042642.01.T01 |
| Chr8 | CDS | 11863057 | 11863091 | 11863057 | ID=MsG0880042642.01.T01:cds;Parent=MsG0880042642.01.T01 |
| Chr8 | CDS | 11862340 | 11862989 | 11862340 | ID=MsG0880042642.01.T01:cds;Parent=MsG0880042642.01.T01 |
| Gene Sequence |
| Protein sequence |
