AlfalfaGEDB | MsG0180002300.01

M. sativa cultivar ZhongmuNo.1 / MsG0180002300.01

KEGG: -
GO: -
PFAM: PF14223

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180002300.01.T02	PNX91497.1	73.361	244	17	1	1	196	1	244	3.39E-111	328
MsG0180002300.01.T01	PNX91497.1	77.049	244	17	1	1	205	1	244	1.11E-119	350

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180002300.01.T01	P10978	29.339	242	118	10	7	204	5	237	1.98E-17	83.6
MsG0180002300.01.T02	P10978	29.339	242	109	10	7	195	5	237	7.65E-16	78.6

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180002300.01.T01	A0A2K3ML10	77.049	244	17	1	1	205	1	244	5.32e-120	350
MsG0180002300.01.T02	A0A2K3ML10	73.361	244	17	1	1	196	1	244	1.62e-111	328

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048058.01	MsG0180002300.01	0.824453	8.008030e-54	7.095703e-51
MsG0080048178.01	MsG0180002300.01	0.818095	2.343437e-52	1.737527e-49
MsG0080048765.01	MsG0180002300.01	0.819952	8.861538e-53	6.918014e-50
MsG0080048830.01	MsG0180002300.01	0.803726	3.038707e-49	1.538333e-46
MsG0180000101.01	MsG0180002300.01	0.858683	6.962864e-63	1.791741e-59
MsG0180000235.01	MsG0180002300.01	0.816819	4.544099e-52	3.253560e-49
MsG0180000263.01	MsG0180002300.01	0.833949	3.974113e-56	4.647874e-53
MsG0180000494.01	MsG0180002300.01	0.816120	6.513926e-52	4.575735e-49
MsG0180000555.01	MsG0180002300.01	0.827294	1.693674e-54	1.628294e-51
MsG0180000741.01	MsG0180002300.01	0.849497	3.114328e-60	5.915025e-57
MsG0180000797.01	MsG0180002300.01	0.813057	3.103872e-51	2.006006e-48
MsG0180000856.01	MsG0180002300.01	0.830401	2.998285e-55	3.155518e-52
MsG0180001294.01	MsG0180002300.01	0.812575	3.957686e-51	2.525467e-48
MsG0180001312.01	MsG0180002300.01	0.819135	1.361715e-52	1.039052e-49
MsG0180001315.01	MsG0180002300.01	0.812508	4.092960e-51	2.607255e-48
MsG0180001570.01	MsG0180002300.01	0.815011	1.150015e-51	7.837009e-49
MsG0180001599.01	MsG0180002300.01	0.848979	4.339927e-60	8.106144e-57
MsG0180001911.01	MsG0180002300.01	0.802063	6.700925e-49	3.251229e-46
MsG0180001922.01	MsG0180002300.01	0.866977	1.921088e-65	6.598869e-62
MsG0180002071.01	MsG0180002300.01	0.814699	1.349082e-51	9.116026e-49
MsG0180002185.01	MsG0180002300.01	0.807171	5.759342e-50	3.185620e-47
MsG0180002300.01	MsG0180002709.01	0.813753	2.182484e-51	1.437425e-48
MsG0180002300.01	MsG0180003181.01	0.815447	9.201743e-52	6.345855e-49
MsG0180002300.01	MsG0180003190.01	0.854076	1.565396e-61	3.455371e-58
MsG0180002300.01	MsG0180003303.01	0.862341	5.428335e-64	1.584241e-60
MsG0180002300.01	MsG0180003744.01	0.890269	1.147909e-73	9.585302e-70
MsG0180002300.01	MsG0180003977.01	0.823636	1.244905e-53	1.077981e-50
MsG0180002300.01	MsG0180004016.01	0.832101	1.145609e-55	1.267716e-52
MsG0180002300.01	MsG0180004056.01	0.849036	4.182697e-60	7.827373e-57
MsG0180002300.01	MsG0180004437.01	0.835846	1.322882e-56	1.637568e-53
MsG0180002300.01	MsG0180004444.01	0.834178	3.482042e-56	4.099651e-53
MsG0180002300.01	MsG0180004598.01	0.864524	1.143217e-64	3.599971e-61
MsG0180002300.01	MsG0180004645.01	0.865708	4.854038e-65	1.594598e-61
MsG0180002300.01	MsG0180004730.01	0.818914	1.528357e-52	1.159282e-49
MsG0180002300.01	MsG0180004767.01	0.857475	1.591162e-62	3.932181e-59
MsG0180002300.01	MsG0180004809.01	0.815636	8.353474e-52	5.790995e-49
MsG0180002300.01	MsG0180005125.01	0.815652	8.283475e-52	5.745040e-49
MsG0180002300.01	MsG0180005228.01	0.820921	5.311216e-53	4.259476e-50
MsG0180002300.01	MsG0180005304.01	0.801836	7.460206e-49	3.598872e-46
MsG0180002300.01	MsG0180005407.01	0.804409	2.190758e-49	1.128672e-46
MsG0180002300.01	MsG0180005765.01	0.842437	2.587870e-58	3.924148e-55
MsG0180002300.01	MsG0180005773.01	0.808424	3.117843e-50	1.782116e-47
MsG0180002300.01	MsG0180005786.01	0.801439	9.000141e-49	4.298221e-46
MsG0180002300.01	MsG0180005813.01	0.817981	2.487053e-52	1.838282e-49
MsG0180002300.01	MsG0180005944.01	0.816634	4.998450e-52	3.560802e-49
MsG0180002300.01	MsG0180005949.01	0.825047	5.799677e-54	5.228218e-51
MsG0180002300.01	MsG0180005985.01	0.845213	4.671690e-59	7.729444e-56
MsG0180002300.01	MsG0180005999.01	0.804376	2.225743e-49	1.145780e-46
MsG0180002300.01	MsG0180006016.01	0.814161	1.773353e-51	1.180999e-48
MsG0180002300.01	MsG0180006023.01	0.803003	4.289824e-49	2.131683e-46
MsG0180002300.01	MsG0180006050.01	0.882080	1.406074e-70	8.447296e-67
MsG0180002300.01	MsG0180006098.01	0.821125	4.767231e-53	3.844934e-50
MsG0180002300.01	MsG0180006128.01	0.834789	2.446792e-56	2.933944e-53
MsG0180002300.01	MsG0280006367.01	0.847827	9.039509e-60	1.626741e-56
MsG0180002300.01	MsG0280006368.01	0.813538	2.433765e-51	1.593716e-48
MsG0180002300.01	MsG0280006432.01	0.808115	3.628244e-50	2.057040e-47
MsG0180002300.01	MsG0280006440.01	0.802358	5.827329e-49	2.848850e-46
MsG0180002300.01	MsG0280006462.01	0.825340	4.945873e-54	4.495534e-51
MsG0180002300.01	MsG0280006595.01	0.830779	2.422802e-55	2.578384e-52
MsG0180002300.01	MsG0280006728.01	0.804328	2.277773e-49	1.171085e-46
MsG0180002300.01	MsG0280006892.01	0.857201	1.917755e-62	4.695532e-59
MsG0180002300.01	MsG0280006935.01	0.862663	4.319681e-64	1.274920e-60
MsG0180002300.01	MsG0280007011.01	0.830426	2.957458e-55	3.114754e-52
MsG0180002300.01	MsG0280007048.01	0.860031	2.741508e-63	7.390652e-60
MsG0180002300.01	MsG0280007087.01	0.843626	1.248007e-58	1.964430e-55
MsG0180002300.01	MsG0280007109.01	0.815179	1.055418e-51	7.224606e-49
MsG0180002300.01	MsG0280007117.01	0.806517	7.915584e-50	4.305037e-47
MsG0180002300.01	MsG0280007549.01	0.809097	2.238754e-50	1.302558e-47
MsG0180002300.01	MsG0280007564.01	0.810330	1.216001e-50	7.308955e-48
MsG0180002300.01	MsG0280007585.01	0.824224	9.060834e-54	7.976892e-51
MsG0180002300.01	MsG0280007726.01	0.828441	8.973270e-55	8.920331e-52
MsG0180002300.01	MsG0280007775.01	0.824232	9.021947e-54	7.944561e-51
MsG0180002300.01	MsG0280007790.01	0.802956	4.385074e-49	2.176548e-46
MsG0180002300.01	MsG0280007829.01	0.811240	7.727702e-51	4.758561e-48
MsG0180002300.01	MsG0280007830.01	0.822395	2.423413e-53	2.026115e-50
MsG0180002300.01	MsG0280007948.01	0.808804	2.587150e-50	1.493420e-47
MsG0180002300.01	MsG0280008134.01	0.829485	5.014814e-55	5.139467e-52
MsG0180002300.01	MsG0280008234.01	0.814012	1.913761e-51	1.269364e-48
MsG0180002300.01	MsG0280008286.01	0.846595	1.968302e-59	3.405119e-56
MsG0180002300.01	MsG0280008502.01	0.824183	9.264106e-54	8.146363e-51
MsG0180002300.01	MsG0280008849.01	0.805312	1.418342e-49	7.479603e-47
MsG0180002300.01	MsG0280010153.01	0.811877	5.618176e-51	3.518256e-48
MsG0180002300.01	MsG0280010416.01	0.822181	2.717116e-53	2.257509e-50
MsG0180002300.01	MsG0280010447.01	0.826093	3.277037e-54	3.043128e-51
MsG0180002300.01	MsG0280010448.01	0.810505	1.114901e-50	6.732431e-48
MsG0180002300.01	MsG0280010735.01	0.817923	2.562809e-52	1.891447e-49
MsG0180002300.01	MsG0280010784.01	0.801449	8.956708e-49	4.278634e-46
MsG0180002300.01	MsG0280010816.01	0.822075	2.875908e-53	2.382168e-50
MsG0180002300.01	MsG0280010866.01	0.812612	3.884296e-51	2.481058e-48
MsG0180002300.01	MsG0280010901.01	0.860951	1.443021e-63	4.014574e-60
MsG0180002300.01	MsG0280010976.01	0.838429	2.891625e-57	3.872030e-54
MsG0180002300.01	MsG0280011043.01	0.803960	2.716223e-49	1.383448e-46
MsG0180002300.01	MsG0280011056.01	0.825735	3.987136e-54	3.665134e-51
MsG0180002300.01	MsG0280011075.01	0.872974	2.104107e-67	8.976768e-64
MsG0180002300.01	MsG0280011131.01	0.800205	1.607849e-48	7.442239e-46
MsG0180002300.01	MsG0280011182.01	0.837767	4.279124e-57	5.616012e-54
MsG0180002300.01	MsG0280011201.01	0.819131	1.364422e-52	1.041027e-49
MsG0180002300.01	MsG0280011220.01	0.806690	7.277107e-50	3.975259e-47
MsG0180002300.01	MsG0280011293.01	0.805819	1.110601e-49	5.933638e-47
MsG0180002300.01	MsG0280011336.01	0.836498	9.032199e-57	1.140271e-53
MsG0180002300.01	MsG0280011410.01	0.813378	2.638041e-51	1.720026e-48
MsG0180002300.01	MsG0280011423.01	0.807143	5.838215e-50	3.226851e-47
MsG0180002300.01	MsG0380011721.01	0.804959	1.681966e-49	8.790057e-47
MsG0180002300.01	MsG0380011729.01	0.804196	2.426102e-49	1.243114e-46
MsG0180002300.01	MsG0380011840.01	0.801998	6.911506e-49	3.347777e-46
MsG0180002300.01	MsG0380012020.01	0.836231	1.056363e-56	1.323225e-53
MsG0180002300.01	MsG0380012124.01	0.843611	1.259881e-58	1.982157e-55
MsG0180002300.01	MsG0380012458.01	0.835590	1.536176e-56	1.886988e-53
MsG0180002300.01	MsG0380014489.01	0.831559	1.558961e-55	1.697931e-52
MsG0180002300.01	MsG0380014541.01	0.834196	3.446164e-56	4.059737e-53
MsG0180002300.01	MsG0380014576.01	0.812630	3.849350e-51	2.459894e-48
MsG0180002300.01	MsG0380014913.01	0.814346	1.614451e-51	1.080608e-48
MsG0180002300.01	MsG0380015436.01	0.834527	2.846083e-56	3.386842e-53
MsG0180002300.01	MsG0380015444.01	0.820107	8.166141e-53	6.403620e-50
MsG0180002300.01	MsG0380015512.01	0.805378	1.374139e-49	7.258710e-47
MsG0180002300.01	MsG0380015607.01	0.867686	1.139922e-65	4.014747e-62
MsG0180002300.01	MsG0380015614.01	0.840395	8.923834e-58	1.269496e-54
MsG0180002300.01	MsG0380015713.01	0.800975	1.119914e-48	5.286481e-46
MsG0180002300.01	MsG0380016209.01	0.808209	3.465494e-50	1.969700e-47
MsG0180002300.01	MsG0380016223.01	0.800179	1.626953e-48	7.525798e-46
MsG0180002300.01	MsG0380016483.01	0.804679	1.923690e-49	9.980631e-47
MsG0180002300.01	MsG0380016513.01	0.802932	4.436184e-49	2.200557e-46
MsG0180002300.01	MsG0380016752.01	0.809773	1.603374e-50	9.498428e-48
MsG0180002300.01	MsG0380016941.01	0.806580	7.676690e-50	4.181818e-47
MsG0180002300.01	MsG0380016971.01	0.825563	4.379592e-54	4.006037e-51
MsG0180002300.01	MsG0380017003.01	0.822634	2.133123e-53	1.795580e-50
MsG0180002300.01	MsG0380017146.01	0.807059	6.080188e-50	3.353373e-47
MsG0180002300.01	MsG0380017210.01	0.864466	1.191673e-64	3.745304e-61
MsG0180002300.01	MsG0380017229.01	0.817536	3.134062e-52	2.288518e-49
MsG0180002300.01	MsG0380017285.01	0.855913	4.584667e-62	1.075335e-58
MsG0180002300.01	MsG0380017316.01	0.905358	4.671662e-80	7.526957e-76
MsG0180002300.01	MsG0380017403.01	0.821191	4.604699e-53	3.720693e-50
MsG0180002300.01	MsG0380017476.01	0.805679	1.188233e-49	6.325652e-47
MsG0180002300.01	MsG0380017604.01	0.806648	7.428315e-50	4.053270e-47
MsG0180002300.01	MsG0380017719.01	0.845035	5.219375e-59	8.586890e-56
MsG0180002300.01	MsG0380017939.01	0.806262	8.960964e-50	4.842197e-47
MsG0180002300.01	MsG0480018332.01	0.815127	1.084167e-51	7.410952e-49
MsG0180002300.01	MsG0480018460.01	0.879502	1.182517e-69	6.426326e-66
MsG0180002300.01	MsG0480018462.01	0.850448	1.687542e-60	3.306771e-57
MsG0180002300.01	MsG0480018479.01	0.848215	7.063732e-60	1.286838e-56
MsG0180002300.01	MsG0480019170.01	0.807293	5.426402e-50	3.011034e-47
MsG0180002300.01	MsG0480019289.01	0.838115	3.483508e-57	4.619803e-54
MsG0180002300.01	MsG0480020331.01	0.813932	1.992561e-51	1.318723e-48
MsG0180002300.01	MsG0480020416.01	0.854077	1.564325e-61	3.453120e-58
MsG0180002300.01	MsG0480020530.01	0.831855	1.317732e-55	1.447912e-52
MsG0180002300.01	MsG0480020540.01	0.819501	1.123479e-52	8.661052e-50
MsG0180002300.01	MsG0480020719.01	0.816619	5.038259e-52	3.587721e-49
MsG0180002300.01	MsG0480020829.01	0.800637	1.312989e-48	6.144498e-46
MsG0180002300.01	MsG0480021034.01	0.835677	1.460093e-56	1.798340e-53
MsG0180002300.01	MsG0480021204.01	0.840514	8.307542e-58	1.186185e-54
MsG0180002300.01	MsG0480021216.01	0.853426	2.408027e-61	5.201601e-58
MsG0180002300.01	MsG0480021240.01	0.863632	2.167902e-64	6.617097e-61
MsG0180002300.01	MsG0480021772.01	0.816075	6.665976e-52	4.676942e-49
MsG0180002300.01	MsG0480021900.01	0.823528	1.319258e-53	1.138817e-50
MsG0180002300.01	MsG0480021914.01	0.823436	1.386471e-53	1.193683e-50
MsG0180002300.01	MsG0480022026.01	0.814910	1.211063e-51	8.229870e-49
MsG0180002300.01	MsG0480022104.01	0.801186	1.013781e-48	4.810842e-46
MsG0180002300.01	MsG0480022108.01	0.822124	2.802101e-53	2.324368e-50
MsG0180002300.01	MsG0480022318.01	0.832422	9.537101e-56	1.065478e-52
MsG0180002300.01	MsG0480022552.01	0.857671	1.392203e-62	3.463326e-59
MsG0180002300.01	MsG0480022678.01	0.870538	1.353395e-66	5.283962e-63
MsG0180002300.01	MsG0480022710.01	0.808171	3.531114e-50	2.004983e-47
MsG0180002300.01	MsG0480022717.01	0.814318	1.637784e-51	1.095403e-48
MsG0180002300.01	MsG0480022719.01	0.815735	7.936845e-52	5.517247e-49
MsG0180002300.01	MsG0480023224.01	0.824444	8.047050e-54	7.128522e-51
MsG0180002300.01	MsG0480023240.01	0.822134	2.786803e-53	2.312387e-50
MsG0180002300.01	MsG0480023270.01	0.811734	6.037571e-51	3.766646e-48
MsG0180002300.01	MsG0480023412.01	0.854462	1.211345e-61	2.707316e-58
MsG0180002300.01	MsG0480023517.01	0.816371	5.724420e-52	4.048834e-49
MsG0180002300.01	MsG0480023554.01	0.823448	1.377888e-53	1.186684e-50
MsG0180002300.01	MsG0480023659.01	0.806480	8.059891e-50	4.379383e-47
MsG0180002300.01	MsG0580024205.01	0.853278	2.656508e-61	5.709360e-58
MsG0180002300.01	MsG0580024311.01	0.831151	1.963848e-55	2.113020e-52
MsG0180002300.01	MsG0580024323.01	0.803602	3.222719e-49	1.626397e-46
MsG0180002300.01	MsG0580024353.01	0.819779	9.706609e-53	7.541327e-50
MsG0180002300.01	MsG0580024581.01	0.824888	6.322716e-54	5.674053e-51
MsG0180002300.01	MsG0580024618.01	0.802191	6.306250e-49	3.069667e-46
MsG0180002300.01	MsG0580024682.01	0.800524	1.384386e-48	6.460051e-46
MsG0180002300.01	MsG0580024733.01	0.806416	8.314560e-50	4.510272e-47
MsG0180002300.01	MsG0580024770.01	0.816190	6.281886e-52	4.421322e-49
MsG0180002300.01	MsG0580024956.01	0.807357	5.259292e-50	2.923132e-47
MsG0180002300.01	MsG0580024960.01	0.813166	2.937671e-51	1.904093e-48
MsG0180002300.01	MsG0580025009.01	0.809429	1.900989e-50	1.115869e-47
MsG0180002300.01	MsG0580025026.01	0.824410	8.193633e-54	7.251164e-51
MsG0180002300.01	MsG0580025128.01	0.830781	2.421050e-55	2.576608e-52
MsG0180002300.01	MsG0580025184.01	0.808305	3.305799e-50	1.883615e-47
MsG0180002300.01	MsG0580025414.01	0.813958	1.966797e-51	1.302594e-48
MsG0180002300.01	MsG0580025497.01	0.804897	1.732517e-49	9.040370e-47
MsG0180002300.01	MsG0580025520.01	0.802236	6.175421e-49	3.009458e-46
MsG0180002300.01	MsG0580025907.01	0.833776	4.391147e-56	5.108541e-53
MsG0180002300.01	MsG0580025989.01	0.817131	3.865556e-52	2.791538e-49
MsG0180002300.01	MsG0580026068.01	0.836868	7.272750e-57	9.284546e-54
MsG0180002300.01	MsG0580026225.01	0.814591	1.425019e-51	9.601574e-49
MsG0180002300.01	MsG0580026664.01	0.802699	4.957075e-49	2.444457e-46
MsG0180002300.01	MsG0580027476.01	0.811208	7.852374e-51	4.831372e-48
MsG0180002300.01	MsG0580028526.01	0.809223	2.104222e-50	1.228422e-47
MsG0180002300.01	MsG0580029208.01	0.831304	1.801133e-55	1.946692e-52
MsG0180002300.01	MsG0580029629.01	0.816499	5.357774e-52	3.802608e-49
MsG0180002300.01	MsG0580029639.01	0.817520	3.160862e-52	2.307094e-49
MsG0180002300.01	MsG0580029658.01	0.865907	4.200963e-65	1.389700e-61
MsG0180002300.01	MsG0580030003.01	0.807749	4.341882e-50	2.438029e-47
MsG0180002300.01	MsG0680030321.01	0.802972	4.353094e-49	2.161457e-46
MsG0180002300.01	MsG0680030351.01	0.801606	8.319458e-49	3.989741e-46
MsG0180002300.01	MsG0680030684.01	0.834221	3.398056e-56	4.006090e-53
MsG0180002300.01	MsG0680030841.01	0.821062	4.929372e-53	3.969011e-50
MsG0180002300.01	MsG0680031063.01	0.801272	9.735787e-49	4.630121e-46
MsG0180002300.01	MsG0680031275.01	0.832631	8.468834e-56	9.520240e-53
MsG0180002300.01	MsG0680031301.01	0.829090	6.252877e-55	6.334553e-52
MsG0180002300.01	MsG0680031699.01	0.818336	2.067135e-52	1.543050e-49
MsG0180002300.01	MsG0680033302.01	0.808899	2.468239e-50	1.428379e-47
MsG0180002300.01	MsG0680034067.01	0.823076	1.682735e-53	1.434274e-50
MsG0180002300.01	MsG0680034757.01	0.825732	3.993202e-54	3.670442e-51
MsG0180002300.01	MsG0680035476.01	0.807272	5.482011e-50	3.040296e-47
MsG0180002300.01	MsG0680035574.01	0.803133	4.030910e-49	2.009786e-46
MsG0180002300.01	MsG0680035582.01	0.805865	1.086080e-49	5.809504e-47
MsG0180002300.01	MsG0680035737.01	0.806827	6.807439e-50	3.732020e-47
MsG0180002300.01	MsG0780035958.01	0.802397	5.720653e-49	2.799444e-46
MsG0180002300.01	MsG0780036247.01	-0.824640	7.235504e-54	6.447027e-51
MsG0180002300.01	MsG0780036633.01	0.812887	3.381551e-51	2.175602e-48
MsG0180002300.01	MsG0780036836.01	0.803724	3.040570e-49	1.539222e-46
MsG0180002300.01	MsG0780036845.01	0.829922	3.925413e-55	4.074702e-52
MsG0180002300.01	MsG0780037755.01	0.828521	8.584218e-55	8.553236e-52
MsG0180002300.01	MsG0780037975.01	0.808104	3.648825e-50	2.068027e-47
MsG0180002300.01	MsG0780038092.01	0.804807	1.808940e-49	9.416855e-47
MsG0180002300.01	MsG0780038565.01	0.812151	4.896666e-51	3.089475e-48
MsG0180002300.01	MsG0780039452.01	0.815071	1.115685e-51	7.614814e-49
MsG0180002300.01	MsG0780039570.01	0.808444	3.088533e-50	1.766295e-47
MsG0180002300.01	MsG0780039587.01	0.857805	1.270924e-62	3.175178e-59
MsG0180002300.01	MsG0780039717.01	0.809345	1.981443e-50	1.160521e-47
MsG0180002300.01	MsG0780039845.01	0.819247	1.283535e-52	9.824862e-50
MsG0180002300.01	MsG0780040125.01	0.839777	1.293385e-57	1.804792e-54
MsG0180002300.01	MsG0780040312.01	0.860849	1.550338e-63	4.297957e-60
MsG0180002300.01	MsG0780040389.01	0.806780	6.966358e-50	3.814367e-47
MsG0180002300.01	MsG0780040411.01	0.812959	3.259901e-51	2.101271e-48
MsG0180002300.01	MsG0780040519.01	0.829765	4.285250e-55	4.428553e-52
MsG0180002300.01	MsG0780040687.01	0.813139	2.977912e-51	1.928808e-48
MsG0180002300.01	MsG0780040712.01	0.805652	1.203794e-49	6.403959e-47
MsG0180002300.01	MsG0780040742.01	0.861842	7.719184e-64	2.213833e-60
MsG0180002300.01	MsG0780040845.01	0.842855	2.004376e-58	3.078729e-55
MsG0180002300.01	MsG0780040856.01	0.807043	6.129758e-50	3.379262e-47
MsG0180002300.01	MsG0780041033.01	0.800317	1.525075e-48	7.079707e-46
MsG0180002300.01	MsG0780041183.01	0.829894	3.986848e-55	4.135405e-52
MsG0180002300.01	MsG0780041222.01	0.815257	1.014034e-51	6.956403e-49
MsG0180002300.01	MsG0780041310.01	0.834604	2.722829e-56	3.247401e-53
MsG0180002300.01	MsG0780041370.01	0.846813	1.716108e-59	2.989797e-56
MsG0180002300.01	MsG0780041371.01	0.809950	1.468662e-50	8.740545e-48
MsG0180002300.01	MsG0780041423.01	0.803083	4.128031e-49	2.055518e-46
MsG0180002300.01	MsG0780041469.01	0.813235	2.836685e-51	1.842113e-48
MsG0180002300.01	MsG0780041490.01	0.803591	3.240524e-49	1.634921e-46
MsG0180002300.01	MsG0780041754.01	0.820391	7.032406e-53	5.557481e-50
MsG0180002300.01	MsG0880042206.01	0.829570	4.780956e-55	4.911894e-52
MsG0180002300.01	MsG0880042329.01	0.848110	7.553236e-60	1.371314e-56
MsG0180002300.01	MsG0880042811.01	0.819018	1.447510e-52	1.101122e-49
MsG0180002300.01	MsG0880043001.01	0.829862	4.060357e-55	4.208051e-52
MsG0180002300.01	MsG0880043116.01	0.827640	1.399003e-54	1.358458e-51
MsG0180002300.01	MsG0880043162.01	0.863086	3.200155e-64	9.584104e-61
MsG0180002300.01	MsG0880043341.01	0.941724	2.526501e-101	3.019664e-96
MsG0180002300.01	MsG0880043522.01	0.812479	4.153902e-51	2.644071e-48
MsG0180002300.01	MsG0880043532.01	0.817575	3.071740e-52	2.245323e-49
MsG0180002300.01	MsG0880043533.01	0.841510	4.548686e-58	6.698905e-55
MsG0180002300.01	MsG0880044546.01	0.855522	5.961787e-62	1.380196e-58
MsG0180002300.01	MsG0880044917.01	0.824323	8.589597e-54	7.582857e-51
MsG0180002300.01	MsG0880044950.01	0.800710	1.268748e-48	5.948175e-46
MsG0180002300.01	MsG0880045106.01	0.850021	2.223149e-60	4.295790e-57
MsG0180002300.01	MsG0880045165.01	0.873090	1.925223e-67	8.250144e-64
MsG0180002300.01	MsG0880045450.01	0.800344	1.506420e-48	6.997725e-46
MsG0180002300.01	MsG0880045619.01	0.836427	9.420251e-57	1.186771e-53
MsG0180002300.01	MsG0880045869.01	0.806508	7.950159e-50	4.322852e-47
MsG0180002300.01	MsG0880045914.01	0.813626	2.327476e-51	1.527729e-48
MsG0180002300.01	MsG0880046047.01	0.846249	2.446113e-59	4.184273e-56
MsG0180002300.01	MsG0880046113.01	0.845414	4.121867e-59	6.863863e-56
MsG0180002300.01	MsG0880046163.01	0.800726	1.258805e-48	5.904319e-46
MsG0180002300.01	MsG0880046329.01	0.838898	2.187476e-57	2.971058e-54
MsG0180002300.01	MsG0880046404.01	0.843117	1.706222e-58	2.642407e-55
MsG0180002300.01	MsG0880046450.01	0.806766	7.014466e-50	3.839344e-47
MsG0180002300.01	MsG0880046643.01	0.824478	7.897572e-54	7.003206e-51
MsG0180002300.01	MsG0880046684.01	0.831917	1.271517e-55	1.399717e-52
MsG0180002300.01	MsG0880046733.01	0.802395	5.725497e-49	2.801687e-46
MsG0180002300.01	MsG0880047016.01	0.810952	8.922840e-51	5.453489e-48
MsG0180002300.01	MsG0880047019.01	0.818691	1.717421e-52	1.294534e-49
MsG0180002300.01	MsG0880047391.01	0.815367	9.589237e-52	6.598386e-49
MsG0180002300.01	MsG0880047497.01	0.808838	2.543922e-50	1.469788e-47
MsG0180002300.01	MsG0880047590.01	0.844177	8.883014e-59	1.422465e-55
MsG0180002300.01	MsG0880047745.01	0.826370	2.815770e-54	2.635718e-51

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180002300.01.T02	MTR_2g039140	40.132	152	74	2	1	135	120	271	2.60e-25	99.8
MsG0180002300.01.T02	MTR_4g036430	89.744	39	4	0	1	39	31	69	1.27e-20	82.0
MsG0180002300.01.T01	MTR_2g039140	47.934	121	56	1	31	144	151	271	3.60e-30	112
MsG0180002300.01.T01	MTR_4g036430	89.744	39	4	0	1	39	31	69	6.22e-20	80.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180002300.01.T02	AT3G29785	57.778	90	37	1	11	100	7	95	1.22e-32	114
MsG0180002300.01.T01	AT3G29785	57.778	90	37	1	11	100	7	95	1.32e-32	114

Find 21 sgRNAs with CRISPR-Local

Find 49 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTGAGAACTACGATGATTTC+TGG	0.189947	1:-36434761	None:intergenic
ACTACGATGATTTCTGGATT+TGG	0.314338	1:-36434755	None:intergenic
ATTTCTGGATTTGGATTGTC+TGG	0.336440	1:-36434746	None:intergenic
AGAAATTCAACCAGAGGAAA+TGG	0.417568	1:+36434706	MsG0180002300.01.T02:CDS
TGTCTTCCCTACCAGATAGT+TGG	0.424640	1:+36434533	MsG0180002300.01.T02:intron
GAGATCCGACGGAGAGAGTT+GGG	0.442215	1:+36434640	MsG0180002300.01.T02:CDS
ATTTGATGATGTTCGTGATC+TGG	0.482957	1:+36434606	MsG0180002300.01.T02:CDS
TTTACCACGTCCATTTCCTC+TGG	0.487326	1:-36434716	None:intergenic
TCTATCGAGTGTTGGAATTG+TGG	0.512167	1:+36434793	MsG0180002300.01.T02:CDS
CACAGCTGTGAGTAGCTCCT+CGG	0.527844	1:+36434567	MsG0180002300.01.T02:intron
ACAGCTGTGAGTAGCTCCTC+GGG	0.532462	1:+36434568	MsG0180002300.01.T02:intron
AGAGATCCGACGGAGAGAGT+TGG	0.549236	1:+36434639	MsG0180002300.01.T02:CDS
ACTCGAAATCTATCGAGTGT+TGG	0.561027	1:+36434785	MsG0180002300.01.T02:CDS
CTCTGTATGCAATACTGAAG+AGG	0.567853	1:-36434674	None:intergenic
AAATGGACGTGGTAAATCAA+AGG	0.596335	1:+36434723	MsG0180002300.01.T02:CDS
ATTCACCCAACTCTCTCCGT+CGG	0.618585	1:-36434645	None:intergenic
TACTCAGTGAAGAGATCCGA+CGG	0.629113	1:+36434629	MsG0180002300.01.T02:CDS
AGAGGAAGAAATTCAACCAG+AGG	0.643795	1:+36434700	MsG0180002300.01.T02:CDS
TCAACCAGAGGAAATGGACG+TGG	0.665050	1:+36434712	MsG0180002300.01.T02:CDS
GTATTGCATACAGAGTCAAG+AGG	0.682691	1:+36434682	MsG0180002300.01.T02:CDS
GTTGGAATTGTGGAAAGACG+AGG	0.688365	1:+36434803	MsG0180002300.01.T02:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	CAAATAAAGTTCATTTGATG+AGG	+	Chr1:36434380-36434399	MsG0180002300.01.T02:CDS	25.0%
	ATAAAGTTCATTTGATGAGG+CGG	+	Chr1:36434383-36434402	MsG0180002300.01.T02:CDS	30.0%
	GATACCAACTGAACTTAATT+GGG	-	Chr1:36434479-36434498	None:intergenic	30.0%
	GTGAAAATTGAAAAGTTCGA+TGG	+	Chr1:36434112-36434131	MsG0180002300.01.T02:CDS	30.0%
!	TGAACTTTATTTGATGCTGA+AGG	-	Chr1:36434373-36434392	None:intergenic	30.0%
	AAAGAAACCAGAATCGATGA+AGG	+	Chr1:36434210-36434229	MsG0180002300.01.T02:CDS	35.0%
	AAATGGACGTGGTAAATCAA+AGG	+	Chr1:36434723-36434742	MsG0180002300.01.T02:CDS	35.0%
	AATTGAAAAGTTCGATGGTG+CGG	+	Chr1:36434117-36434136	MsG0180002300.01.T02:CDS	35.0%
	ACAACCCAATTAAGTTCAGT+TGG	+	Chr1:36434472-36434491	MsG0180002300.01.T02:intron	35.0%
	AGAAATTCAACCAGAGGAAA+TGG	+	Chr1:36434706-36434725	MsG0180002300.01.T02:CDS	35.0%
	CGATACCAACTGAACTTAAT+TGG	-	Chr1:36434480-36434499	None:intergenic	35.0%
!	ACTACGATGATTTCTGGATT+TGG	-	Chr1:36434758-36434777	None:intergenic	35.0%
!	ATTTCTGGATTTGGATTGTC+TGG	-	Chr1:36434749-36434768	None:intergenic	35.0%
!!	ATTTGATGATGTTCGTGATC+TGG	+	Chr1:36434606-36434625	MsG0180002300.01.T02:CDS	35.0%
	AATCGATGAAGGATGATGAG+TGG	+	Chr1:36434221-36434240	MsG0180002300.01.T02:CDS	40.0%
	ACTCGAAATCTATCGAGTGT+TGG	+	Chr1:36434785-36434804	MsG0180002300.01.T02:CDS	40.0%
	AGAGGAAGAAATTCAACCAG+AGG	+	Chr1:36434700-36434719	MsG0180002300.01.T02:CDS	40.0%
	CTCTGTATGCAATACTGAAG+AGG	-	Chr1:36434677-36434696	None:intergenic	40.0%
	CTGAGAACTACGATGATTTC+TGG	-	Chr1:36434764-36434783	None:intergenic	40.0%
	GTATTGCATACAGAGTCAAG+AGG	+	Chr1:36434682-36434701	MsG0180002300.01.T02:CDS	40.0%
	TTTACACTTCGGATGACAGA+AGG	+	Chr1:36434409-36434428	MsG0180002300.01.T02:CDS	40.0%
!	TGGTATCGAATTTGACGATG+AGG	+	Chr1:36434492-36434511	MsG0180002300.01.T02:intron	40.0%
!	TTTCATCTTTTTGCTTCCCG+AGG	-	Chr1:36434587-36434606	None:intergenic	40.0%
!!	TCATCATCCTTCATCGATTC+TGG	-	Chr1:36434220-36434239	None:intergenic	40.0%
!!	TCTATCGAGTGTTGGAATTG+TGG	+	Chr1:36434793-36434812	MsG0180002300.01.T02:CDS	40.0%
!!	TCTGGTTTCTTTTCTGTGAG+AGG	-	Chr1:36434202-36434221	None:intergenic	40.0%
	AAGAGCCTTCATAAGACCAG+CGG	-	Chr1:36434332-36434351	None:intergenic	45.0%
	ACAGTAGCACTCCAACTATC+TGG	-	Chr1:36434547-36434566	None:intergenic	45.0%
	AGCACTCCAACTATCTGGTA+GGG	-	Chr1:36434542-36434561	None:intergenic	45.0%
	CAAGTGCTTGTCTATCGAGA+AGG	-	Chr1:36434249-36434268	None:intergenic	45.0%
	CTTCTCGATAGACAAGCACT+TGG	+	Chr1:36434247-36434266	MsG0180002300.01.T02:CDS	45.0%
	GTTGGAATTGTGGAAAGACG+AGG	+	Chr1:36434803-36434822	MsG0180002300.01.T02:CDS	45.0%
	TACTCAGTGAAGAGATCCGA+CGG	+	Chr1:36434629-36434648	MsG0180002300.01.T02:CDS	45.0%
	TAGCACTCCAACTATCTGGT+AGG	-	Chr1:36434543-36434562	None:intergenic	45.0%
	TGAGGCGGTTGTTTACACTT+CGG	+	Chr1:36434398-36434417	MsG0180002300.01.T02:CDS	45.0%
	TGTCTTCCCTACCAGATAGT+TGG	+	Chr1:36434533-36434552	MsG0180002300.01.T02:intron	45.0%
	TTTACCACGTCCATTTCCTC+TGG	-	Chr1:36434719-36434738	None:intergenic	45.0%
	AAGTTCGATGGTGCGGACTT+TGG	+	Chr1:36434124-36434143	MsG0180002300.01.T02:CDS	50.0%
	ATTCACCCAACTCTCTCCGT+CGG	-	Chr1:36434648-36434667	None:intergenic	50.0%
	GCAAAAGAGAAAACCACCGC+TGG	+	Chr1:36434313-36434332	MsG0180002300.01.T02:CDS	50.0%
	TCAACCAGAGGAAATGGACG+TGG	+	Chr1:36434712-36434731	MsG0180002300.01.T02:CDS	50.0%
!!	AACCACCGCTGGTCTTATGA+AGG	+	Chr1:36434324-36434343	MsG0180002300.01.T02:CDS	50.0%
!!!	ATGGTGCGGACTTTGGCTTT+TGG	+	Chr1:36434131-36434150	MsG0180002300.01.T02:CDS	50.0%
	ACAGCTGTGAGTAGCTCCTC+GGG	+	Chr1:36434568-36434587	MsG0180002300.01.T02:intron	55.0%
	AGAGATCCGACGGAGAGAGT+TGG	+	Chr1:36434639-36434658	MsG0180002300.01.T02:CDS	55.0%
	AGCCTTCATAAGACCAGCGG+TGG	-	Chr1:36434329-36434348	None:intergenic	55.0%
	CACAGCTGTGAGTAGCTCCT+CGG	+	Chr1:36434567-36434586	MsG0180002300.01.T02:intron	55.0%
	GAGATCCGACGGAGAGAGTT+GGG	+	Chr1:36434640-36434659	MsG0180002300.01.T02:CDS	55.0%
!	GATGACAGAAGGCGCATCAG+TGG	+	Chr1:36434420-36434439	MsG0180002300.01.T02:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	36434091	36434846	36434091	ID=MsG0180002300.01;Name=MsG0180002300.01
Chr1	mRNA	36434091	36434846	36434091	ID=MsG0180002300.01.T01;Parent=MsG0180002300.01;Name=MsG0180002300.01.T01;_AED=0.44;_eAED=0.44;_QI=0\|0\|0\|1\|0\|0\|2\|0\|212
Chr1	exon	36434548	36434846	36434548	ID=MsG0180002300.01.T01:exon:237;Parent=MsG0180002300.01.T01
Chr1	CDS	36434091	36434430	36434091	ID=MsG0180002300.01.T01:cds;Parent=MsG0180002300.01.T01
Chr1	CDS	36434548	36434846	36434548	ID=MsG0180002300.01.T01:cds;Parent=MsG0180002300.01.T01
Chr1	mRNA	36434091	36434846	36434091	ID=MsG0180002300.01.T02;Parent=MsG0180002300.01;Name=MsG0180002300.01.T02;_AED=0.44;_eAED=0.44;_QI=0\|0\|0\|1\|0\|0\|2\|0\|203
Chr1	exon	36434575	36434846	36434575	ID=MsG0180002300.01.T02:exon:238;Parent=MsG0180002300.01.T02
Chr1	CDS	36434091	36434430	36434091	ID=MsG0180002300.01.T02:cds;Parent=MsG0180002300.01.T02
Chr1	CDS	36434575	36434846	36434575	ID=MsG0180002300.01.T02:cds;Parent=MsG0180002300.01.T02

Gene Sequence

>MsG0180002300.01.T02

ATGGCTGCAGACGAAGGAAAGGTGAAAATTGAAAAGTTCGATGGTGCGGACTTTGGCTTTTGGAAGATGCAGATCGAAGATTATTTGTATCAGAAAAAGCTACATCAACCTCTCACAGAAAAGAAACCAGAATCGATGAAGGATGATGAGTGGAACCTTCTCGATAGACAAGCACTTGGTGTTGTGCGATTGTCGTTATCTCGAAATGTTGCTTTTAACATAGCAAAAGAGAAAACCACCGCTGGTCTTATGAAGGCTCTTTCTAGCATGTACGAAAAGCCTTCAGCATCAAATAAAGTTCATTTGATGAGGCGGTTGTTTACACTTCGGATGACAGAAGTGAGTAGCTCCTCGGGAAGCAAAAAGATGAAATTTGATGATGTTCGTGATCTGGTACTCAGTGAAGAGATCCGACGGAGAGAGTTGGGTGAATCTTCATCCTCTTCAGTATTGCATACAGAGTCAAGAGGAAGAAATTCAACCAGAGGAAATGGACGTGGTAAATCAAAGGCCAGACAATCCAAATCCAGAAATCATCGTAGTTCTCAGAACTCGAAATCTATCGAGTGTTGGAATTGTGGAAAGACGAGGACACTTCAAAAATCAGTGTAG

>MsG0180002300.01.T01

ATGGCTGCAGACGAAGGAAAGGTGAAAATTGAAAAGTTCGATGGTGCGGACTTTGGCTTTTGGAAGATGCAGATCGAAGATTATTTGTATCAGAAAAAGCTACATCAACCTCTCACAGAAAAGAAACCAGAATCGATGAAGGATGATGAGTGGAACCTTCTCGATAGACAAGCACTTGGTGTTGTGCGATTGTCGTTATCTCGAAATGTTGCTTTTAACATAGCAAAAGAGAAAACCACCGCTGGTCTTATGAAGGCTCTTTCTAGCATGTACGAAAAGCCTTCAGCATCAAATAAAGTTCATTTGATGAGGCGGTTGTTTACACTTCGGATGACAGAAGATAGTTGGAGTGCTACTGTCACAGCTGTGAGTAGCTCCTCGGGAAGCAAAAAGATGAAATTTGATGATGTTCGTGATCTGGTACTCAGTGAAGAGATCCGACGGAGAGAGTTGGGTGAATCTTCATCCTCTTCAGTATTGCATACAGAGTCAAGAGGAAGAAATTCAACCAGAGGAAATGGACGTGGTAAATCAAAGGCCAGACAATCCAAATCCAGAAATCATCGTAGTTCTCAGAACTCGAAATCTATCGAGTGTTGGAATTGTGGAAAGACGAGGACACTTCAAAAATCAGTGTAG

Protein sequence

>MsG0180002300.01.T02

MAADEGKVKIEKFDGADFGFWKMQIEDYLYQKKLHQPLTEKKPESMKDDEWNLLDRQALGVVRLSLSRNVAFNIAKEKTTAGLMKALSSMYEKPSASNKVHLMRRLFTLRMTEVSSSSGSKKMKFDDVRDLVLSEEIRRRELGESSSSSVLHTESRGRNSTRGNGRGKSKARQSKSRNHRSSQNSKSIECWNCGKTRTLQKSV*

>MsG0180002300.01.T01

MAADEGKVKIEKFDGADFGFWKMQIEDYLYQKKLHQPLTEKKPESMKDDEWNLLDRQALGVVRLSLSRNVAFNIAKEKTTAGLMKALSSMYEKPSASNKVHLMRRLFTLRMTEDSWSATVTAVSSSSGSKKMKFDDVRDLVLSEEIRRRELGESSSSSVLHTESRGRNSTRGNGRGKSKARQSKSRNHRSSQNSKSIECWNCGKTRTLQKSV*