Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031428.01.T01 | XP_003618833.1 | 95.539 | 269 | 12 | 0 | 1 | 269 | 1 | 269 | 0 | 528 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031428.01.T01 | A0A3Q8GYY4 | 56.693 | 254 | 107 | 2 | 9 | 259 | 3 | 256 | 2.88E-92 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031428.01.T01 | G7KNM8 | 95.539 | 269 | 12 | 0 | 1 | 269 | 1 | 269 | 0.0 | 528 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048357.01 | MsG0680031428.01 | 0.820584 | 6.351132e-53 | 5.045320e-50 |
| MsG0180000632.01 | MsG0680031428.01 | 0.804384 | 2.217152e-49 | 1.141583e-46 |
| MsG0180000777.01 | MsG0680031428.01 | 0.816491 | 5.381595e-52 | 3.818609e-49 |
| MsG0180001200.01 | MsG0680031428.01 | 0.805135 | 1.544842e-49 | 8.109833e-47 |
| MsG0180001771.01 | MsG0680031428.01 | 0.801778 | 7.666641e-49 | 3.692895e-46 |
| MsG0180003741.01 | MsG0680031428.01 | 0.849867 | 2.453627e-60 | 4.717170e-57 |
| MsG0180004765.01 | MsG0680031428.01 | 0.815904 | 7.279736e-52 | 5.083223e-49 |
| MsG0180005113.01 | MsG0680031428.01 | 0.808935 | 2.425529e-50 | 1.405003e-47 |
| MsG0180005153.01 | MsG0680031428.01 | 0.819345 | 1.219216e-52 | 9.356919e-50 |
| MsG0280010980.01 | MsG0680031428.01 | 0.804056 | 2.594745e-49 | 1.324850e-46 |
| MsG0280011003.01 | MsG0680031428.01 | 0.812841 | 3.459923e-51 | 2.223224e-48 |
| MsG0280011013.01 | MsG0680031428.01 | 0.807983 | 3.871459e-50 | 2.187190e-47 |
| MsG0380011496.01 | MsG0680031428.01 | 0.836690 | 8.070790e-57 | 1.024841e-53 |
| MsG0380011501.01 | MsG0680031428.01 | 0.845784 | 3.271999e-59 | 5.514650e-56 |
| MsG0680031263.01 | MsG0680031428.01 | 0.819313 | 1.240099e-52 | 9.508978e-50 |
| MsG0680031428.01 | MsG0680031621.01 | 0.824413 | 8.181096e-54 | 7.240738e-51 |
| MsG0680031428.01 | MsG0680031707.01 | 0.831826 | 1.339339e-55 | 1.470429e-52 |
| MsG0680031428.01 | MsG0680031959.01 | 0.812882 | 3.389631e-51 | 2.180514e-48 |
| MsG0680031428.01 | MsG0680035658.01 | 0.817124 | 3.880223e-52 | 2.801510e-49 |
| MsG0680031428.01 | MsG0680035683.01 | 0.812067 | 5.108545e-51 | 3.215595e-48 |
| MsG0680031428.01 | MsG0780036148.01 | 0.828540 | 8.493097e-55 | 8.467272e-52 |
| MsG0680031428.01 | MsG0780040287.01 | 0.812881 | 3.391077e-51 | 2.181394e-48 |
| MsG0680031428.01 | MsG0780040846.01 | 0.875544 | 2.833391e-68 | 1.328252e-64 |
| MsG0680031428.01 | MsG0780040888.01 | 0.800355 | 1.498478e-48 | 6.962800e-46 |
| MsG0680031428.01 | MsG0780041698.01 | 0.837581 | 4.776151e-57 | 6.231712e-54 |
| MsG0680031428.01 | MsG0880041834.01 | 0.807700 | 4.447058e-50 | 2.493830e-47 |
| MsG0680031428.01 | MsG0880041858.01 | 0.831457 | 1.651442e-55 | 1.793186e-52 |
| MsG0680031428.01 | MsG0880042442.01 | 0.828675 | 7.879136e-55 | 7.885591e-52 |
| MsG0680031428.01 | MsG0880045145.01 | 0.818606 | 1.795401e-52 | 1.350103e-49 |
| MsG0680031428.01 | MsG0880045177.01 | 0.801032 | 1.090242e-48 | 5.153861e-46 |
| MsG0680031428.01 | MsG0880045585.01 | 0.819824 | 9.483432e-53 | 7.376922e-50 |
| MsG0680031428.01 | MsG0880045586.01 | 0.802368 | 5.800254e-49 | 2.836306e-46 |
| MsG0680031428.01 | MsG0880046580.01 | 0.806008 | 1.013334e-49 | 5.440334e-47 |
| MsG0680031428.01 | MsG0880046942.01 | 0.823633 | 1.246781e-53 | 1.079527e-50 |
| MsG0680031428.01 | MsG0880047135.01 | 0.815158 | 1.066903e-51 | 7.299113e-49 |
| MsG0680031428.01 | MsG0880047472.01 | 0.819510 | 1.118266e-52 | 8.622985e-50 |
| MsG0680031428.01 | MsG0880047473.01 | 0.830658 | 2.594193e-55 | 2.750872e-52 |
| MsG0480018909.01 | MsG0680031428.01 | 0.823980 | 1.034322e-53 | 9.043221e-51 |
| MsG0480020879.01 | MsG0680031428.01 | 0.810651 | 1.036846e-50 | 6.285668e-48 |
| MsG0480021452.01 | MsG0680031428.01 | 0.816039 | 6.791395e-52 | 4.760271e-49 |
| MsG0480021465.01 | MsG0680031428.01 | 0.811523 | 6.708347e-51 | 4.161965e-48 |
| MsG0480024022.01 | MsG0680031428.01 | 0.812149 | 4.903044e-51 | 3.093276e-48 |
| MsG0380015577.01 | MsG0680031428.01 | 0.828507 | 8.653959e-55 | 8.619163e-52 |
| MsG0580027650.01 | MsG0680031428.01 | 0.831453 | 1.654920e-55 | 1.796770e-52 |
| MsG0580027925.01 | MsG0680031428.01 | 0.830118 | 3.515054e-55 | 3.669292e-52 |
| MsG0580028960.01 | MsG0680031428.01 | 0.806399 | 8.383869e-50 | 4.545862e-47 |
| MsG0580029310.01 | MsG0680031428.01 | 0.830086 | 3.579037e-55 | 3.732495e-52 |
| MsG0580029417.01 | MsG0680031428.01 | 0.813950 | 1.974025e-51 | 1.307120e-48 |
| MsG0580029418.01 | MsG0680031428.01 | 0.805977 | 1.028601e-49 | 5.517900e-47 |
| MsG0680030328.01 | MsG0680031428.01 | 0.808835 | 2.547494e-50 | 1.471744e-47 |
| MsG0280006592.01 | MsG0680031428.01 | 0.826341 | 2.860503e-54 | 2.675348e-51 |
| MsG0280006966.01 | MsG0680031428.01 | 0.829573 | 4.774294e-55 | 4.905429e-52 |
| MsG0280006967.01 | MsG0680031428.01 | 0.813887 | 2.039136e-51 | 1.347955e-48 |
| MsG0280007414.01 | MsG0680031428.01 | 0.809507 | 1.828785e-50 | 1.075693e-47 |
| MsG0280007515.01 | MsG0680031428.01 | 0.817843 | 2.672311e-52 | 1.967884e-49 |
| MsG0280007884.01 | MsG0680031428.01 | 0.821751 | 3.418491e-53 | 2.805636e-50 |
| MsG0280007955.01 | MsG0680031428.01 | 0.815312 | 9.861641e-52 | 6.775500e-49 |
| MsG0280008390.01 | MsG0680031428.01 | 0.816312 | 5.899398e-52 | 4.166171e-49 |
| MsG0280008391.01 | MsG0680031428.01 | 0.815061 | 1.121184e-51 | 7.650385e-49 |
| MsG0280008392.01 | MsG0680031428.01 | 0.823692 | 1.207722e-53 | 1.047562e-50 |
| MsG0280008899.01 | MsG0680031428.01 | 0.806244 | 9.037535e-50 | 4.881377e-47 |
| MsG0280009920.01 | MsG0680031428.01 | 0.822995 | 1.757834e-53 | 1.494766e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031428.01.T01 | MTR_6g023610 | 95.539 | 269 | 12 | 0 | 1 | 269 | 1 | 269 | 0.0 | 528 |
| MsG0680031428.01.T01 | MTR_6g023910 | 79.926 | 269 | 54 | 0 | 1 | 269 | 1 | 269 | 1.11e-161 | 449 |
| MsG0680031428.01.T01 | MTR_6g023590 | 70.943 | 265 | 77 | 0 | 1 | 265 | 1 | 265 | 1.29e-141 | 399 |
| MsG0680031428.01.T01 | MTR_6g023990 | 70.677 | 266 | 77 | 1 | 1 | 265 | 1 | 266 | 5.28e-139 | 392 |
| MsG0680031428.01.T01 | MTR_6g023600 | 71.321 | 265 | 76 | 0 | 1 | 265 | 1 | 265 | 2.13e-136 | 385 |
| MsG0680031428.01.T01 | MTR_6g023950 | 72.414 | 261 | 72 | 0 | 1 | 261 | 1 | 261 | 6.71e-133 | 376 |
| MsG0680031428.01.T01 | MTR_6g023600 | 69.811 | 265 | 74 | 1 | 1 | 265 | 1 | 259 | 2.56e-130 | 370 |
| MsG0680031428.01.T01 | MTR_7g110130 | 51.200 | 250 | 121 | 1 | 12 | 261 | 5 | 253 | 7.65e-84 | 252 |
| MsG0680031428.01.T01 | MTR_2g090165 | 50.800 | 250 | 121 | 2 | 12 | 261 | 5 | 252 | 2.01e-80 | 243 |
| MsG0680031428.01.T01 | MTR_7g110140 | 48.606 | 251 | 127 | 2 | 11 | 261 | 4 | 252 | 4.86e-78 | 237 |
| MsG0680031428.01.T01 | MTR_7g105460 | 45.594 | 261 | 140 | 2 | 1 | 261 | 1 | 259 | 3.22e-74 | 228 |
| MsG0680031428.01.T01 | MTR_7g110160 | 48.400 | 250 | 109 | 2 | 12 | 261 | 5 | 234 | 5.24e-74 | 226 |
| MsG0680031428.01.T01 | MTR_4g052320 | 44.882 | 254 | 136 | 3 | 8 | 261 | 3 | 252 | 3.37e-69 | 215 |
| MsG0680031428.01.T01 | MTR_4g052300 | 45.635 | 252 | 132 | 3 | 8 | 259 | 3 | 249 | 3.45e-69 | 214 |
| MsG0680031428.01.T01 | MTR_4g052340 | 45.382 | 249 | 131 | 3 | 12 | 260 | 13 | 256 | 5.39e-69 | 214 |
| MsG0680031428.01.T01 | MTR_4g052350 | 45.968 | 248 | 129 | 3 | 12 | 259 | 13 | 255 | 3.97e-68 | 212 |
| MsG0680031428.01.T01 | MTR_6g035395 | 45.600 | 250 | 121 | 3 | 12 | 261 | 4 | 238 | 3.20e-65 | 204 |
| MsG0680031428.01.T01 | MTR_4g078630 | 45.098 | 255 | 129 | 4 | 12 | 259 | 18 | 268 | 1.32e-64 | 204 |
| MsG0680031428.01.T01 | MTR_7g071680 | 43.223 | 273 | 133 | 6 | 12 | 265 | 28 | 297 | 1.67e-64 | 204 |
| MsG0680031428.01.T01 | MTR_6g023940 | 53.738 | 214 | 37 | 3 | 1 | 214 | 1 | 152 | 2.61e-63 | 196 |
| MsG0680031428.01.T01 | MTR_7g107670 | 38.722 | 266 | 153 | 5 | 6 | 265 | 26 | 287 | 1.76e-58 | 188 |
| MsG0680031428.01.T01 | MTR_7g083870 | 39.773 | 264 | 146 | 6 | 6 | 261 | 28 | 286 | 3.65e-56 | 182 |
| MsG0680031428.01.T01 | MTR_7g105590 | 45.550 | 191 | 102 | 2 | 10 | 200 | 5 | 193 | 1.43e-54 | 175 |
| MsG0680031428.01.T01 | MTR_7g105580 | 41.200 | 250 | 127 | 4 | 12 | 261 | 7 | 236 | 2.78e-53 | 174 |
| MsG0680031428.01.T01 | MTR_3g020670 | 37.363 | 273 | 162 | 4 | 3 | 268 | 6 | 276 | 4.42e-51 | 169 |
| MsG0680031428.01.T01 | MTR_4g084800 | 51.748 | 143 | 68 | 1 | 1 | 143 | 1 | 142 | 2.25e-48 | 157 |
| MsG0680031428.01.T01 | MTR_3g113870 | 38.967 | 213 | 118 | 5 | 21 | 231 | 29 | 231 | 5.79e-45 | 152 |
| MsG0680031428.01.T01 | MTR_7g105570 | 35.341 | 249 | 108 | 2 | 13 | 261 | 21 | 216 | 4.76e-40 | 139 |
| MsG0680031428.01.T01 | MTR_7g113650 | 32.576 | 264 | 153 | 8 | 12 | 262 | 39 | 290 | 4.41e-30 | 114 |
| MsG0680031428.01.T01 | MTR_1g082760 | 33.585 | 265 | 149 | 8 | 12 | 262 | 39 | 290 | 1.27e-29 | 113 |
| MsG0680031428.01.T01 | MTR_7g094510 | 31.395 | 258 | 165 | 5 | 11 | 262 | 4 | 255 | 4.98e-29 | 110 |
| MsG0680031428.01.T01 | MTR_7g094520 | 31.818 | 264 | 170 | 5 | 4 | 262 | 2 | 260 | 1.55e-27 | 107 |
| MsG0680031428.01.T01 | MTR_4g132850 | 32.000 | 250 | 159 | 6 | 12 | 259 | 6 | 246 | 3.76e-27 | 105 |
| MsG0680031428.01.T01 | MTR_3g085740 | 29.615 | 260 | 160 | 9 | 12 | 262 | 74 | 319 | 2.82e-25 | 102 |
| MsG0680031428.01.T01 | MTR_4g131740 | 30.038 | 263 | 156 | 8 | 12 | 259 | 39 | 288 | 1.57e-22 | 94.4 |
| MsG0680031428.01.T01 | MTR_4g058840 | 28.627 | 255 | 155 | 8 | 13 | 252 | 11 | 253 | 1.34e-20 | 89.0 |
| MsG0680031428.01.T01 | MTR_4g058820 | 28.627 | 255 | 155 | 8 | 13 | 252 | 11 | 253 | 1.34e-20 | 89.0 |
| MsG0680031428.01.T01 | MTR_4g064887 | 29.344 | 259 | 171 | 9 | 5 | 259 | 7 | 257 | 2.83e-19 | 85.1 |
| MsG0680031428.01.T01 | MTR_4g058810 | 26.800 | 250 | 166 | 6 | 13 | 252 | 11 | 253 | 8.35e-19 | 84.0 |
| MsG0680031428.01.T01 | MTR_1g068955 | 31.128 | 257 | 162 | 7 | 11 | 259 | 12 | 261 | 8.54e-19 | 84.0 |
| MsG0680031428.01.T01 | MTR_7g105560 | 62.687 | 67 | 24 | 1 | 1 | 67 | 1 | 66 | 9.90e-19 | 80.9 |
| MsG0680031428.01.T01 | MTR_1196s0010 | 31.907 | 257 | 146 | 10 | 16 | 262 | 277 | 514 | 7.91e-18 | 83.2 |
| MsG0680031428.01.T01 | MTR_7g063320 | 30.078 | 256 | 167 | 7 | 13 | 262 | 15 | 264 | 2.51e-17 | 79.7 |
| MsG0680031428.01.T01 | MTR_7g063330 | 27.559 | 254 | 173 | 7 | 13 | 261 | 15 | 262 | 3.73e-17 | 79.3 |
| MsG0680031428.01.T01 | MTR_3g068175 | 28.736 | 261 | 170 | 8 | 13 | 267 | 17 | 267 | 6.89e-17 | 78.6 |
| MsG0680031428.01.T01 | MTR_1g051165 | 27.132 | 258 | 174 | 8 | 12 | 258 | 13 | 267 | 8.86e-17 | 78.6 |
| MsG0680031428.01.T01 | MTR_4g064887 | 30.288 | 208 | 136 | 7 | 5 | 208 | 7 | 209 | 1.42e-16 | 77.0 |
| MsG0680031428.01.T01 | MTR_8g096580 | 28.700 | 223 | 135 | 7 | 16 | 232 | 48 | 252 | 2.29e-16 | 77.8 |
| MsG0680031428.01.T01 | MTR_3g068085 | 29.811 | 265 | 162 | 12 | 13 | 267 | 15 | 265 | 3.20e-16 | 76.6 |
| MsG0680031428.01.T01 | MTR_3g068070 | 28.148 | 270 | 174 | 10 | 1 | 261 | 1 | 259 | 5.10e-15 | 73.6 |
| MsG0680031428.01.T01 | MTR_7g063270 | 26.820 | 261 | 166 | 8 | 13 | 261 | 16 | 263 | 7.35e-15 | 72.8 |
| MsG0680031428.01.T01 | MTR_7g063260 | 27.344 | 256 | 172 | 8 | 13 | 261 | 16 | 264 | 8.06e-15 | 72.8 |
| MsG0680031428.01.T01 | MTR_3g068175 | 28.302 | 265 | 170 | 9 | 13 | 267 | 17 | 271 | 1.07e-14 | 72.8 |
| MsG0680031428.01.T01 | MTR_7g063390 | 27.132 | 258 | 170 | 8 | 13 | 261 | 16 | 264 | 1.23e-14 | 72.4 |
| MsG0680031428.01.T01 | MTR_8g096620 | 28.141 | 199 | 127 | 7 | 13 | 204 | 45 | 234 | 1.03e-13 | 70.5 |
| MsG0680031428.01.T01 | MTR_7g063360 | 27.059 | 255 | 174 | 7 | 13 | 261 | 16 | 264 | 1.04e-13 | 69.7 |
| MsG0680031428.01.T01 | MTR_4g086400 | 27.488 | 211 | 129 | 6 | 14 | 207 | 5 | 208 | 6.40e-13 | 68.9 |
| MsG0680031428.01.T01 | MTR_4g086410 | 28.436 | 211 | 127 | 6 | 14 | 207 | 5 | 208 | 7.49e-13 | 68.6 |
| MsG0680031428.01.T01 | MTR_4g097510 | 26.455 | 189 | 133 | 5 | 16 | 203 | 5 | 188 | 2.91e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031428.01.T01 | AT2G47140 | 50.198 | 253 | 124 | 2 | 9 | 261 | 2 | 252 | 6.65e-83 | 249 |
| MsG0680031428.01.T01 | AT2G47130 | 48.438 | 256 | 123 | 4 | 9 | 261 | 2 | 251 | 1.90e-76 | 233 |
| MsG0680031428.01.T01 | AT3G29260 | 49.802 | 253 | 124 | 3 | 9 | 261 | 2 | 251 | 6.41e-76 | 232 |
| MsG0680031428.01.T01 | AT2G47120 | 46.304 | 257 | 134 | 4 | 9 | 265 | 2 | 254 | 3.02e-74 | 227 |
| MsG0680031428.01.T01 | AT3G29250 | 45.914 | 257 | 137 | 2 | 5 | 261 | 34 | 288 | 3.39e-73 | 226 |
| MsG0680031428.01.T01 | AT3G29250 | 46.245 | 253 | 134 | 2 | 9 | 261 | 2 | 252 | 4.87e-73 | 224 |
| MsG0680031428.01.T01 | AT2G47120 | 46.063 | 254 | 133 | 4 | 12 | 265 | 6 | 255 | 1.30e-72 | 223 |
| MsG0680031428.01.T01 | AT3G29250 | 45.560 | 259 | 137 | 3 | 5 | 261 | 34 | 290 | 3.59e-71 | 221 |
| MsG0680031428.01.T01 | AT3G51680 | 42.238 | 277 | 138 | 5 | 1 | 259 | 20 | 292 | 2.34e-61 | 196 |
| MsG0680031428.01.T01 | AT3G26760 | 40.840 | 262 | 144 | 6 | 12 | 265 | 35 | 293 | 1.43e-59 | 191 |
| MsG0680031428.01.T01 | AT3G26770 | 39.689 | 257 | 140 | 6 | 12 | 259 | 40 | 290 | 5.21e-56 | 182 |
| MsG0680031428.01.T01 | AT4G03140 | 38.996 | 259 | 150 | 4 | 12 | 265 | 77 | 332 | 2.06e-55 | 182 |
| MsG0680031428.01.T01 | AT1G52340 | 38.951 | 267 | 151 | 5 | 12 | 268 | 17 | 281 | 5.48e-52 | 171 |
| MsG0680031428.01.T01 | AT3G42960 | 40.684 | 263 | 142 | 7 | 8 | 261 | 3 | 260 | 8.05e-50 | 165 |
| MsG0680031428.01.T01 | AT5G18210 | 32.946 | 258 | 160 | 5 | 13 | 262 | 8 | 260 | 2.17e-29 | 112 |
| MsG0680031428.01.T01 | AT3G05260 | 32.184 | 261 | 157 | 6 | 12 | 262 | 36 | 286 | 9.64e-28 | 108 |
| MsG0680031428.01.T01 | AT5G18210 | 34.440 | 241 | 145 | 5 | 13 | 245 | 8 | 243 | 3.95e-27 | 106 |
| MsG0680031428.01.T01 | AT1G54870 | 32.061 | 262 | 157 | 8 | 12 | 262 | 81 | 332 | 4.41e-27 | 107 |
| MsG0680031428.01.T01 | AT1G54870 | 32.061 | 262 | 157 | 8 | 12 | 262 | 83 | 334 | 4.89e-27 | 107 |
| MsG0680031428.01.T01 | AT3G04000 | 32.234 | 273 | 166 | 6 | 1 | 259 | 1 | 268 | 2.18e-26 | 104 |
| MsG0680031428.01.T01 | AT3G03980 | 31.618 | 272 | 169 | 8 | 3 | 262 | 4 | 270 | 8.99e-26 | 102 |
| MsG0680031428.01.T01 | AT4G13180 | 27.675 | 271 | 178 | 6 | 1 | 262 | 1 | 262 | 1.29e-23 | 97.1 |
| MsG0680031428.01.T01 | AT1G24360 | 26.740 | 273 | 170 | 9 | 2 | 259 | 58 | 315 | 2.20e-21 | 92.0 |
| MsG0680031428.01.T01 | AT4G05530 | 31.325 | 249 | 162 | 6 | 12 | 259 | 8 | 248 | 2.31e-21 | 90.5 |
| MsG0680031428.01.T01 | AT1G63380 | 28.295 | 258 | 165 | 9 | 13 | 258 | 15 | 264 | 2.01e-19 | 85.9 |
| MsG0680031428.01.T01 | AT1G63380 | 28.295 | 258 | 165 | 9 | 13 | 258 | 17 | 266 | 2.09e-19 | 85.9 |
| MsG0680031428.01.T01 | AT1G63380 | 28.295 | 258 | 165 | 9 | 13 | 258 | 19 | 268 | 2.13e-19 | 85.9 |
| MsG0680031428.01.T01 | AT1G63380 | 28.295 | 258 | 165 | 9 | 13 | 258 | 22 | 271 | 2.83e-19 | 85.5 |
| MsG0680031428.01.T01 | AT1G62610 | 27.935 | 247 | 168 | 7 | 13 | 252 | 13 | 256 | 4.08e-19 | 85.1 |
| MsG0680031428.01.T01 | AT1G62610 | 27.935 | 247 | 168 | 7 | 13 | 252 | 14 | 257 | 4.27e-19 | 84.7 |
| MsG0680031428.01.T01 | AT1G62610 | 27.935 | 247 | 168 | 7 | 13 | 252 | 15 | 258 | 4.69e-19 | 84.7 |
| MsG0680031428.01.T01 | AT1G62610 | 28.063 | 253 | 172 | 7 | 13 | 258 | 19 | 268 | 5.12e-19 | 84.7 |
| MsG0680031428.01.T01 | AT3G47350 | 25.381 | 197 | 135 | 5 | 13 | 204 | 44 | 233 | 1.72e-17 | 80.9 |
| MsG0680031428.01.T01 | AT3G47350 | 25.381 | 197 | 135 | 5 | 13 | 204 | 44 | 233 | 2.07e-17 | 80.9 |
| MsG0680031428.01.T01 | AT5G06060 | 27.402 | 281 | 158 | 8 | 7 | 266 | 3 | 258 | 2.49e-17 | 79.7 |
| MsG0680031428.01.T01 | AT3G46170 | 25.483 | 259 | 172 | 6 | 12 | 258 | 25 | 274 | 2.54e-17 | 80.1 |
| MsG0680031428.01.T01 | AT2G29340 | 28.458 | 253 | 165 | 8 | 13 | 259 | 7 | 249 | 4.24e-17 | 79.0 |
| MsG0680031428.01.T01 | AT5G50770 | 30.481 | 187 | 122 | 5 | 13 | 196 | 45 | 226 | 4.77e-17 | 80.1 |
| MsG0680031428.01.T01 | AT2G29370 | 28.185 | 259 | 176 | 7 | 13 | 268 | 16 | 267 | 7.31e-17 | 78.6 |
| MsG0680031428.01.T01 | AT2G29340 | 28.458 | 253 | 165 | 8 | 13 | 259 | 7 | 249 | 7.70e-17 | 79.0 |
| MsG0680031428.01.T01 | AT3G47360 | 26.904 | 197 | 132 | 5 | 13 | 204 | 45 | 234 | 1.29e-16 | 78.6 |
| MsG0680031428.01.T01 | AT2G30670 | 27.451 | 255 | 165 | 8 | 13 | 259 | 7 | 249 | 2.14e-16 | 77.0 |
| MsG0680031428.01.T01 | AT2G29310 | 27.985 | 268 | 161 | 11 | 13 | 266 | 7 | 256 | 5.52e-16 | 75.9 |
| MsG0680031428.01.T01 | AT5G50690 | 28.889 | 180 | 113 | 6 | 12 | 184 | 44 | 215 | 6.06e-16 | 75.9 |
| MsG0680031428.01.T01 | AT5G50590 | 28.889 | 180 | 113 | 6 | 12 | 184 | 44 | 215 | 6.06e-16 | 75.9 |
| MsG0680031428.01.T01 | AT2G29360 | 28.679 | 265 | 167 | 10 | 13 | 268 | 16 | 267 | 6.40e-16 | 75.9 |
| MsG0680031428.01.T01 | AT5G50600 | 25.258 | 194 | 139 | 4 | 13 | 204 | 45 | 234 | 7.27e-16 | 76.6 |
| MsG0680031428.01.T01 | AT5G50700 | 25.258 | 194 | 139 | 4 | 13 | 204 | 45 | 234 | 7.27e-16 | 76.6 |
| MsG0680031428.01.T01 | AT3G55310 | 25.670 | 261 | 169 | 8 | 12 | 258 | 16 | 265 | 1.44e-15 | 75.1 |
| MsG0680031428.01.T01 | AT5G50690 | 28.889 | 180 | 113 | 6 | 12 | 184 | 44 | 215 | 1.51e-15 | 75.5 |
| MsG0680031428.01.T01 | AT5G50590 | 28.889 | 180 | 113 | 6 | 12 | 184 | 44 | 215 | 1.51e-15 | 75.5 |
| MsG0680031428.01.T01 | AT3G55290 | 25.097 | 259 | 173 | 7 | 12 | 258 | 16 | 265 | 1.51e-15 | 75.1 |
| MsG0680031428.01.T01 | AT3G55290 | 25.097 | 259 | 173 | 7 | 12 | 258 | 17 | 266 | 1.53e-15 | 75.1 |
| MsG0680031428.01.T01 | AT2G29150 | 30.078 | 256 | 156 | 10 | 13 | 259 | 16 | 257 | 2.54e-15 | 74.3 |
| MsG0680031428.01.T01 | AT2G29340 | 28.713 | 202 | 131 | 7 | 13 | 208 | 7 | 201 | 5.47e-15 | 72.0 |
| MsG0680031428.01.T01 | AT2G29340 | 28.713 | 202 | 131 | 7 | 13 | 208 | 7 | 201 | 5.47e-15 | 72.0 |
| MsG0680031428.01.T01 | AT2G29300 | 28.679 | 265 | 158 | 11 | 13 | 263 | 7 | 254 | 1.44e-14 | 72.4 |
| MsG0680031428.01.T01 | AT2G29260 | 27.778 | 252 | 168 | 8 | 13 | 259 | 68 | 310 | 2.38e-14 | 72.0 |
| MsG0680031428.01.T01 | AT2G29300 | 28.736 | 261 | 155 | 11 | 13 | 259 | 7 | 250 | 4.51e-14 | 70.9 |
| MsG0680031428.01.T01 | AT2G29320 | 28.295 | 258 | 160 | 10 | 13 | 259 | 13 | 256 | 6.55e-14 | 70.5 |
| MsG0680031428.01.T01 | AT2G29350 | 28.016 | 257 | 170 | 8 | 8 | 259 | 10 | 256 | 7.01e-14 | 70.1 |
| MsG0680031428.01.T01 | AT4G10020 | 28.492 | 179 | 107 | 5 | 16 | 184 | 50 | 217 | 1.39e-13 | 70.5 |
| MsG0680031428.01.T01 | AT2G17845 | 26.616 | 263 | 165 | 9 | 13 | 258 | 47 | 298 | 1.56e-13 | 69.7 |
| MsG0680031428.01.T01 | AT2G29310 | 30.000 | 210 | 118 | 9 | 13 | 208 | 7 | 201 | 1.78e-13 | 67.8 |
| MsG0680031428.01.T01 | AT2G29290 | 27.490 | 251 | 170 | 7 | 13 | 259 | 7 | 249 | 1.09e-12 | 66.6 |
| MsG0680031428.01.T01 | AT2G29350 | 29.703 | 202 | 131 | 7 | 8 | 204 | 10 | 205 | 1.70e-12 | 65.9 |
| MsG0680031428.01.T01 | AT1G07440 | 27.863 | 262 | 154 | 8 | 13 | 259 | 12 | 253 | 3.63e-12 | 65.5 |
| MsG0680031428.01.T01 | AT3G47350 | 30.189 | 106 | 68 | 2 | 13 | 116 | 44 | 145 | 1.56e-11 | 63.5 |
Find 84 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCACCCTTATCCCATATT+TGG | 0.193090 | 6:-20330463 | None:intergenic |
| TCCATCTGATCAGACTATTT+TGG | 0.219303 | 6:+20330218 | MsG0680031428.01.T01:CDS |
| ATATCGAAGCATGCAATAAT+AGG | 0.242360 | 6:+20330411 | MsG0680031428.01.T01:CDS |
| CATCTACTAACAACGGTCTT+AGG | 0.262828 | 6:+20329283 | MsG0680031428.01.T01:CDS |
| ATGCATCCCATGATTATAAA+AGG | 0.287833 | 6:+20329213 | MsG0680031428.01.T01:five_prime_UTR |
| CCATTGACTATGAGATTGTT+AGG | 0.292303 | 6:+20330513 | MsG0680031428.01.T01:CDS |
| GCACCCTATCTCCTATTAAA+AGG | 0.302761 | 6:+20329118 | MsG0680031428.01.T01:five_prime_UTR |
| AGTGTGCAACTTGCCAAATA+TGG | 0.311353 | 6:+20330450 | MsG0680031428.01.T01:CDS |
| GGCAGATGCTGTGTTGTTCT+TGG | 0.317529 | 6:+20330614 | MsG0680031428.01.T01:CDS |
| CAATCAACGGTCAATGCTTA+TGG | 0.322095 | 6:+20329516 | MsG0680031428.01.T01:CDS |
| AGACGTGATGGTTTAGAATA+AGG | 0.343084 | 6:-20329177 | None:intergenic |
| TTAAACTATATCATGGGCTT+TGG | 0.347375 | 6:+20330852 | MsG0680031428.01.T01:three_prime_UTR |
| GATATTATGTTTAGCAATGC+TGG | 0.362324 | 6:+20330186 | MsG0680031428.01.T01:CDS |
| ACTTCTAGGTGGAGTGTTAG+AGG | 0.396791 | 6:+20330783 | MsG0680031428.01.T01:three_prime_UTR |
| CAATGGTGGAGGGGCGCGTG+AGG | 0.412179 | 6:+20330322 | MsG0680031428.01.T01:CDS |
| CGTCTCTTTGCCAATGCCAC+TGG | 0.416288 | 6:-20329340 | None:intergenic |
| CTTATATTGAATTTATTTGA+AGG | 0.428350 | 6:+20330743 | MsG0680031428.01.T01:three_prime_UTR |
| CTTGATTGCCCAACTCGTCT+TGG | 0.428967 | 6:-20329413 | None:intergenic |
| AATGGTGTTGCTAATCCATT+TGG | 0.430166 | 6:-20330495 | None:intergenic |
| CTGAATCCATTGGCGCCCGC+AGG | 0.430325 | 6:+20329439 | MsG0680031428.01.T01:CDS |
| AACTTGCCAAATATGGGATA+AGG | 0.435956 | 6:+20330457 | MsG0680031428.01.T01:CDS |
| GGTGCACCTGCGGGCGCCAA+TGG | 0.437909 | 6:-20329445 | None:intergenic |
| CACCATGCGTGCACCTTGAT+CGG | 0.442941 | 6:-20329376 | None:intergenic |
| GGTGGAGTGTTAGAGGTGTA+TGG | 0.447683 | 6:+20330790 | MsG0680031428.01.T01:three_prime_UTR |
| AATGGTGGAGGGGCGCGTGA+GGG | 0.448062 | 6:+20330323 | MsG0680031428.01.T01:CDS |
| TATCGAAGCATGCAATAATA+GGG | 0.448557 | 6:+20330412 | MsG0680031428.01.T01:CDS |
| GTGAATTGTGTCTCGCCAAA+TGG | 0.451124 | 6:+20330480 | MsG0680031428.01.T01:CDS |
| ACGGGAGGTGCCAGTGGCAT+TGG | 0.457796 | 6:+20329330 | MsG0680031428.01.T01:CDS |
| CGCGGCGCGTGCAATGGTGG+AGG | 0.462300 | 6:+20330311 | MsG0680031428.01.T01:CDS |
| CGTGACGATGGCTACTTTGC+CGG | 0.469579 | 6:-20329310 | None:intergenic |
| ACTTGCCAAATATGGGATAA+GGG | 0.469695 | 6:+20330458 | MsG0680031428.01.T01:CDS |
| GTGTGCACAGCGAGCGTCCT+GGG | 0.473161 | 6:+20330354 | MsG0680031428.01.T01:CDS |
| GCGCATCTCTTTGCCGATCA+AGG | 0.473582 | 6:+20329363 | MsG0680031428.01.T01:CDS |
| GTGTTTGCAGTTAACATTCG+AGG | 0.478434 | 6:+20330267 | MsG0680031428.01.T01:CDS |
| ATGGTGGAGGGGCGCGTGAG+GGG | 0.485342 | 6:+20330324 | MsG0680031428.01.T01:CDS |
| CATTGACTATGAGATTGTTA+GGG | 0.487258 | 6:+20330514 | MsG0680031428.01.T01:CDS |
| AATCAAGTGGCTGAATCCAT+TGG | 0.488953 | 6:+20329429 | MsG0680031428.01.T01:CDS |
| GTGTGCAACTTGCCAAATAT+GGG | 0.491153 | 6:+20330451 | MsG0680031428.01.T01:CDS |
| TGTGTGCACAGCGAGCGTCC+TGG | 0.491477 | 6:+20330353 | MsG0680031428.01.T01:CDS |
| TGCTGACATCCAAGACGAGT+TGG | 0.496429 | 6:+20329404 | MsG0680031428.01.T01:CDS |
| GCGGCGCGTGCAATGGTGGA+GGG | 0.502098 | 6:+20330312 | MsG0680031428.01.T01:CDS |
| GCTGACATCCAAGACGAGTT+GGG | 0.511409 | 6:+20329405 | MsG0680031428.01.T01:CDS |
| TTATGAACAAAACAAGAGGT+TGG | 0.516866 | 6:+20330563 | MsG0680031428.01.T01:CDS |
| CCTAACAATCTCATAGTCAA+TGG | 0.517810 | 6:-20330513 | None:intergenic |
| ATATTATGTTTAGCAATGCT+GGG | 0.517928 | 6:+20330187 | MsG0680031428.01.T01:CDS |
| AACAACGGTCTTAGGTTAGC+CGG | 0.520911 | 6:+20329291 | MsG0680031428.01.T01:CDS |
| GAAATACGCGGCGCGTGCAA+TGG | 0.524610 | 6:+20330305 | MsG0680031428.01.T01:CDS |
| AACGGTCAATGCTTATGGAC+AGG | 0.524985 | 6:+20329521 | MsG0680031428.01.T01:CDS |
| GGCATTGATCTTCGTGTGGA+TGG | 0.530191 | 6:+20330663 | MsG0680031428.01.T01:CDS |
| TCCAAAATAGTCTGATCAGA+TGG | 0.534810 | 6:-20330219 | None:intergenic |
| GGCAAAGTAGCCATCGTCAC+GGG | 0.538495 | 6:+20329312 | MsG0680031428.01.T01:CDS |
| AATGAATCTGACTTTGTCAC+TGG | 0.541395 | 6:+20330642 | MsG0680031428.01.T01:CDS |
| AAACAAGAGGTTGGAAGGAG+TGG | 0.542973 | 6:+20330572 | MsG0680031428.01.T01:CDS |
| TGCCGATCAAGGTGCACGCA+TGG | 0.543365 | 6:+20329374 | MsG0680031428.01.T01:CDS |
| ATACGCGGCGCGTGCAATGG+TGG | 0.549661 | 6:+20330308 | MsG0680031428.01.T01:CDS |
| GAACAAAACAAGAGGTTGGA+AGG | 0.555611 | 6:+20330567 | MsG0680031428.01.T01:CDS |
| CAGTGGCATTGGCAAAGAGA+CGG | 0.560685 | 6:+20329341 | MsG0680031428.01.T01:CDS |
| TGATTATAAAAGGCTAGGTA+TGG | 0.560912 | 6:+20329223 | MsG0680031428.01.T01:five_prime_UTR |
| ACTGGCACCTCCCGTGACGA+TGG | 0.561243 | 6:-20329322 | None:intergenic |
| TGTTAGAGGTGTATGGAGTG+AGG | 0.562799 | 6:+20330797 | MsG0680031428.01.T01:three_prime_UTR |
| CGGCGCGTGCAATGGTGGAG+GGG | 0.566170 | 6:+20330313 | MsG0680031428.01.T01:CDS |
| ATCGTCACGGGAGGTGCCAG+TGG | 0.571046 | 6:+20329324 | MsG0680031428.01.T01:CDS |
| TCCCATGATTATAAAAGGCT+AGG | 0.593839 | 6:+20329218 | MsG0680031428.01.T01:five_prime_UTR |
| AATGAATGTAGGTGCACCTG+CGG | 0.594995 | 6:-20329455 | None:intergenic |
| ATGAATGTAGGTGCACCTGC+GGG | 0.596754 | 6:-20329454 | None:intergenic |
| TCAAGACACCTACGCTACCC+AGG | 0.598002 | 6:-20330371 | None:intergenic |
| CACTGGCATTGATCTTCGTG+TGG | 0.604023 | 6:+20330659 | MsG0680031428.01.T01:CDS |
| GCGAGCGTCCTGGGTAGCGT+AGG | 0.605148 | 6:+20330363 | MsG0680031428.01.T01:CDS |
| TGGAGTTTGAGACAAGTGAA+AGG | 0.608116 | 6:+20330903 | MsG0680031428.01.T01:three_prime_UTR |
| AGACGAGTTGGGCAATCAAG+TGG | 0.608891 | 6:+20329416 | MsG0680031428.01.T01:CDS |
| AATAATAGGGTTGATGCGCT+CGG | 0.618943 | 6:+20330425 | MsG0680031428.01.T01:CDS |
| TGCTATGTCACAATGAATGT+AGG | 0.627730 | 6:-20329466 | None:intergenic |
| TGATTTATGAACAAAACAAG+AGG | 0.629161 | 6:+20330559 | MsG0680031428.01.T01:CDS |
| GAATGTTAACTGCAAACACA+TGG | 0.631228 | 6:-20330263 | None:intergenic |
| CGGCAAAGTAGCCATCGTCA+CGG | 0.640492 | 6:+20329311 | MsG0680031428.01.T01:CDS |
| AAAGTAGCCATCGTCACGGG+AGG | 0.649070 | 6:+20329315 | MsG0680031428.01.T01:CDS |
| AAATTCCTCACACTTCTAGG+TGG | 0.659212 | 6:+20330772 | MsG0680031428.01.T01:three_prime_UTR |
| ATTGACTATGAGATTGTTAG+GGG | 0.661906 | 6:+20330515 | MsG0680031428.01.T01:CDS |
| TGGGTAGCGTAGGTGTCTTG+AGG | 0.663825 | 6:+20330373 | MsG0680031428.01.T01:CDS |
| GACATTGTGCGTGAAATACG+CGG | 0.664173 | 6:+20330293 | MsG0680031428.01.T01:CDS |
| CGATCAAGGTGCACGCATGG+TGG | 0.678300 | 6:+20329377 | MsG0680031428.01.T01:CDS |
| GGTTCTTAACACTAAACATG+TGG | 0.680290 | 6:+20330593 | MsG0680031428.01.T01:CDS |
| CAAGCTTCATCTACTAACAA+CGG | 0.683944 | 6:+20329276 | MsG0680031428.01.T01:CDS |
| ACACTCCACCTAGAAGTGTG+AGG | 0.688942 | 6:-20330777 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTATATTAAATAAA+TGG | - | Chr6:20330880-20330899 | None:intergenic | 0.0% |
| !! | AAAAATTATATTAAATAAAT+GGG | - | Chr6:20330879-20330898 | None:intergenic | 0.0% |
| !!! | AATAAAATAATTTTTTTTAT+AGG | + | Chr6:20330004-20330023 | MsG0680031428.01.T01:intron | 0.0% |
| !!! | ATAAAATAATTTTTTTTATA+GGG | + | Chr6:20330005-20330024 | MsG0680031428.01.T01:intron | 0.0% |
| !! | ATAAAAATTAAACTATATCA+TGG | + | Chr6:20330845-20330864 | MsG0680031428.01.T01:three_prime_UTR | 10.0% |
| !! | TAAAAATTAAACTATATCAT+GGG | + | Chr6:20330846-20330865 | MsG0680031428.01.T01:three_prime_UTR | 10.0% |
| !!! | TTTTCTTAATGTATAAAAAA+TGG | - | Chr6:20329251-20329270 | None:intergenic | 10.0% |
| !!! | TTTTTTATACATTAAGAAAA+TGG | + | Chr6:20329251-20329270 | MsG0680031428.01.T01:exon | 10.0% |
| !! | CTTATATTGAATTTATTTGA+AGG | + | Chr6:20330743-20330762 | MsG0680031428.01.T01:three_prime_UTR | 15.0% |
| !!! | ATAAAGTCTTATATAGTAAA+CGG | - | Chr6:20330050-20330069 | None:intergenic | 15.0% |
| !! | AAAAAATCTCATTCAATCAA+CGG | + | Chr6:20329503-20329522 | MsG0680031428.01.T01:CDS | 20.0% |
| !!! | GAAGAATTTGAAGTTTTTTT+GGG | - | Chr6:20329705-20329724 | None:intergenic | 20.0% |
| !!! | TAAAGTCTTATATAGTAAAC+GGG | - | Chr6:20330049-20330068 | None:intergenic | 20.0% |
| !!! | TACTGATAGTATAATTTTGT+AGG | + | Chr6:20329943-20329962 | MsG0680031428.01.T01:intron | 20.0% |
| !!! | TGAAGAATTTGAAGTTTTTT+TGG | - | Chr6:20329706-20329725 | None:intergenic | 20.0% |
| !!! | TTGTGAAAAAGTTGTTTTTT+AGG | - | Chr6:20330160-20330179 | None:intergenic | 20.0% |
| ! | ATATTATGTTTAGCAATGCT+GGG | + | Chr6:20330187-20330206 | MsG0680031428.01.T01:CDS | 25.0% |
| ! | CAAAATTTCATAATACACGT+AGG | - | Chr6:20329581-20329600 | None:intergenic | 25.0% |
| ! | TGATTTATGAACAAAACAAG+AGG | + | Chr6:20330559-20330578 | MsG0680031428.01.T01:CDS | 25.0% |
| !! | AAAGTCTTATATAGTAAACG+GGG | - | Chr6:20330048-20330067 | None:intergenic | 25.0% |
| !! | TAACTTTAATTAGTCTCTGT+TGG | - | Chr6:20329925-20329944 | None:intergenic | 25.0% |
| !! | TATTTTTCACTCTACAATGA+AGG | + | Chr6:20330965-20330984 | MsG0680031428.01.T01:three_prime_UTR | 25.0% |
| !!! | AAAAACAACTTTTTCACAAC+AGG | + | Chr6:20330161-20330180 | MsG0680031428.01.T01:intron | 25.0% |
| !!! | CCTCTTGATTATTTTTGATA+GGG | - | Chr6:20329157-20329176 | None:intergenic | 25.0% |
| !!! | TACGTTTTGTTCCTTTTAAT+AGG | - | Chr6:20329132-20329151 | None:intergenic | 25.0% |
| AAAAAATTCCTCACACTTCT+AGG | + | Chr6:20330769-20330788 | MsG0680031428.01.T01:three_prime_UTR | 30.0% | |
| ATATCGAAGCATGCAATAAT+AGG | + | Chr6:20330411-20330430 | MsG0680031428.01.T01:CDS | 30.0% | |
| ATGCATCCCATGATTATAAA+AGG | + | Chr6:20329213-20329232 | MsG0680031428.01.T01:five_prime_UTR | 30.0% | |
| ATTGACTATGAGATTGTTAG+GGG | + | Chr6:20330515-20330534 | MsG0680031428.01.T01:CDS | 30.0% | |
| CATTGTAGAGTGAAAAATAC+AGG | - | Chr6:20330964-20330983 | None:intergenic | 30.0% | |
| CCCTATCAAAAATAATCAAG+AGG | + | Chr6:20329154-20329173 | MsG0680031428.01.T01:five_prime_UTR | 30.0% | |
| GATATTATGTTTAGCAATGC+TGG | + | Chr6:20330186-20330205 | MsG0680031428.01.T01:CDS | 30.0% | |
| GGACAGGTAAAAATTAACTA+GGG | + | Chr6:20329537-20329556 | MsG0680031428.01.T01:intron | 30.0% | |
| TATCGAAGCATGCAATAATA+GGG | + | Chr6:20330412-20330431 | MsG0680031428.01.T01:CDS | 30.0% | |
| TGATTATAAAAGGCTAGGTA+TGG | + | Chr6:20329223-20329242 | MsG0680031428.01.T01:five_prime_UTR | 30.0% | |
| TGGACAGGTAAAAATTAACT+AGG | + | Chr6:20329536-20329555 | MsG0680031428.01.T01:intron | 30.0% | |
| TTAAACTATATCATGGGCTT+TGG | + | Chr6:20330852-20330871 | MsG0680031428.01.T01:three_prime_UTR | 30.0% | |
| TTATGAACAAAACAAGAGGT+TGG | + | Chr6:20330563-20330582 | MsG0680031428.01.T01:CDS | 30.0% | |
| ! | CATTGACTATGAGATTGTTA+GGG | + | Chr6:20330514-20330533 | MsG0680031428.01.T01:CDS | 30.0% |
| ! | GTTCCTTTTAATAGGAGATA+GGG | - | Chr6:20329124-20329143 | None:intergenic | 30.0% |
| ! | TGTTCCTTTTAATAGGAGAT+AGG | - | Chr6:20329125-20329144 | None:intergenic | 30.0% |
| !! | ACCTAGCCTTTTATAATCAT+GGG | - | Chr6:20329222-20329241 | None:intergenic | 30.0% |
| !! | TACCTAGCCTTTTATAATCA+TGG | - | Chr6:20329223-20329242 | None:intergenic | 30.0% |
| !!! | GCCTCTTGATTATTTTTGAT+AGG | - | Chr6:20329158-20329177 | None:intergenic | 30.0% |
| AACTTGCCAAATATGGGATA+AGG | + | Chr6:20330457-20330476 | MsG0680031428.01.T01:CDS | 35.0% | |
| AATGAATCTGACTTTGTCAC+TGG | + | Chr6:20330642-20330661 | MsG0680031428.01.T01:CDS | 35.0% | |
| ACTTGCCAAATATGGGATAA+GGG | + | Chr6:20330458-20330477 | MsG0680031428.01.T01:CDS | 35.0% | |
| ATTCACCCTTATCCCATATT+TGG | - | Chr6:20330466-20330485 | None:intergenic | 35.0% | |
| CAAGCTTCATCTACTAACAA+CGG | + | Chr6:20329276-20329295 | MsG0680031428.01.T01:CDS | 35.0% | |
| CCTAACAATCTCATAGTCAA+TGG | - | Chr6:20330516-20330535 | None:intergenic | 35.0% | |
| GAATGTTAACTGCAAACACA+TGG | - | Chr6:20330266-20330285 | None:intergenic | 35.0% | |
| GGTTCTTAACACTAAACATG+TGG | + | Chr6:20330593-20330612 | MsG0680031428.01.T01:CDS | 35.0% | |
| TCCAAAATAGTCTGATCAGA+TGG | - | Chr6:20330222-20330241 | None:intergenic | 35.0% | |
| TCCCATGATTATAAAAGGCT+AGG | + | Chr6:20329218-20329237 | MsG0680031428.01.T01:five_prime_UTR | 35.0% | |
| TGCTATGTCACAATGAATGT+AGG | - | Chr6:20329469-20329488 | None:intergenic | 35.0% | |
| ! | AGACGTGATGGTTTAGAATA+AGG | - | Chr6:20329180-20329199 | None:intergenic | 35.0% |
| ! | AGATTTTCTACAAGACGTGA+TGG | - | Chr6:20329192-20329211 | None:intergenic | 35.0% |
| ! | CCATTGACTATGAGATTGTT+AGG | + | Chr6:20330513-20330532 | MsG0680031428.01.T01:CDS | 35.0% |
| ! | TCCATCTGATCAGACTATTT+TGG | + | Chr6:20330218-20330237 | MsG0680031428.01.T01:CDS | 35.0% |
| !! | AATGGTGTTGCTAATCCATT+TGG | - | Chr6:20330498-20330517 | None:intergenic | 35.0% |
| AAATTCCTCACACTTCTAGG+TGG | + | Chr6:20330772-20330791 | MsG0680031428.01.T01:three_prime_UTR | 40.0% | |
| AATCAAGTGGCTGAATCCAT+TGG | + | Chr6:20329429-20329448 | MsG0680031428.01.T01:CDS | 40.0% | |
| AGTGTGCAACTTGCCAAATA+TGG | + | Chr6:20330450-20330469 | MsG0680031428.01.T01:CDS | 40.0% | |
| CAATCAACGGTCAATGCTTA+TGG | + | Chr6:20329516-20329535 | MsG0680031428.01.T01:CDS | 40.0% | |
| CATCTACTAACAACGGTCTT+AGG | + | Chr6:20329283-20329302 | MsG0680031428.01.T01:CDS | 40.0% | |
| GAACAAAACAAGAGGTTGGA+AGG | + | Chr6:20330567-20330586 | MsG0680031428.01.T01:CDS | 40.0% | |
| GCACCCTATCTCCTATTAAA+AGG | + | Chr6:20329118-20329137 | MsG0680031428.01.T01:five_prime_UTR | 40.0% | |
| GTGTGCAACTTGCCAAATAT+GGG | + | Chr6:20330451-20330470 | MsG0680031428.01.T01:CDS | 40.0% | |
| GTGTTTGCAGTTAACATTCG+AGG | + | Chr6:20330267-20330286 | MsG0680031428.01.T01:CDS | 40.0% | |
| ! | TGGAGTTTGAGACAAGTGAA+AGG | + | Chr6:20330903-20330922 | MsG0680031428.01.T01:three_prime_UTR | 40.0% |
| !! | AATAATAGGGTTGATGCGCT+CGG | + | Chr6:20330425-20330444 | MsG0680031428.01.T01:CDS | 40.0% |
| AAACAAGAGGTTGGAAGGAG+TGG | + | Chr6:20330572-20330591 | MsG0680031428.01.T01:CDS | 45.0% | |
| AACAACGGTCTTAGGTTAGC+CGG | + | Chr6:20329291-20329310 | MsG0680031428.01.T01:CDS | 45.0% | |
| AACGGTCAATGCTTATGGAC+AGG | + | Chr6:20329521-20329540 | MsG0680031428.01.T01:CDS | 45.0% | |
| AATGAATGTAGGTGCACCTG+CGG | - | Chr6:20329458-20329477 | None:intergenic | 45.0% | |
| GACATTGTGCGTGAAATACG+CGG | + | Chr6:20330293-20330312 | MsG0680031428.01.T01:CDS | 45.0% | |
| GTGAATTGTGTCTCGCCAAA+TGG | + | Chr6:20330480-20330499 | MsG0680031428.01.T01:CDS | 45.0% | |
| ! | ACTTCTAGGTGGAGTGTTAG+AGG | + | Chr6:20330783-20330802 | MsG0680031428.01.T01:three_prime_UTR | 45.0% |
| ! | TGTTAGAGGTGTATGGAGTG+AGG | + | Chr6:20330797-20330816 | MsG0680031428.01.T01:three_prime_UTR | 45.0% |
| !!! | ATTTAATATAATTTTTTAAG+TGG | + | Chr6:20330883-20330902 | MsG0680031428.01.T01:three_prime_UTR | 5.0% |
| ATGAATGTAGGTGCACCTGC+GGG | - | Chr6:20329457-20329476 | None:intergenic | 50.0% | |
| CTTGATTGCCCAACTCGTCT+TGG | - | Chr6:20329416-20329435 | None:intergenic | 50.0% | |
| GCTGACATCCAAGACGAGTT+GGG | + | Chr6:20329405-20329424 | MsG0680031428.01.T01:CDS | 50.0% | |
| TGCTGACATCCAAGACGAGT+TGG | + | Chr6:20329404-20329423 | MsG0680031428.01.T01:CDS | 50.0% | |
| ! | ACACTCCACCTAGAAGTGTG+AGG | - | Chr6:20330780-20330799 | None:intergenic | 50.0% |
| ! | AGACGAGTTGGGCAATCAAG+TGG | + | Chr6:20329416-20329435 | MsG0680031428.01.T01:CDS | 50.0% |
| ! | GGCAGATGCTGTGTTGTTCT+TGG | + | Chr6:20330614-20330633 | MsG0680031428.01.T01:CDS | 50.0% |
| ! | GGTGGAGTGTTAGAGGTGTA+TGG | + | Chr6:20330790-20330809 | MsG0680031428.01.T01:three_prime_UTR | 50.0% |
| !! | CACTGGCATTGATCTTCGTG+TGG | + | Chr6:20330659-20330678 | MsG0680031428.01.T01:CDS | 50.0% |
| !! | CAGTGGCATTGGCAAAGAGA+CGG | + | Chr6:20329341-20329360 | MsG0680031428.01.T01:CDS | 50.0% |
| !! | GGCATTGATCTTCGTGTGGA+TGG | + | Chr6:20330663-20330682 | MsG0680031428.01.T01:CDS | 50.0% |
| AAAGTAGCCATCGTCACGGG+AGG | + | Chr6:20329315-20329334 | MsG0680031428.01.T01:CDS | 55.0% | |
| CACCATGCGTGCACCTTGAT+CGG | - | Chr6:20329379-20329398 | None:intergenic | 55.0% | |
| CGGCAAAGTAGCCATCGTCA+CGG | + | Chr6:20329311-20329330 | MsG0680031428.01.T01:CDS | 55.0% | |
| CGTCTCTTTGCCAATGCCAC+TGG | - | Chr6:20329343-20329362 | None:intergenic | 55.0% | |
| GCGCATCTCTTTGCCGATCA+AGG | + | Chr6:20329363-20329382 | MsG0680031428.01.T01:CDS | 55.0% | |
| GGCAAAGTAGCCATCGTCAC+GGG | + | Chr6:20329312-20329331 | MsG0680031428.01.T01:CDS | 55.0% | |
| TCAAGACACCTACGCTACCC+AGG | - | Chr6:20330374-20330393 | None:intergenic | 55.0% | |
| TGGGTAGCGTAGGTGTCTTG+AGG | + | Chr6:20330373-20330392 | MsG0680031428.01.T01:CDS | 55.0% | |
| ! | CGTGACGATGGCTACTTTGC+CGG | - | Chr6:20329313-20329332 | None:intergenic | 55.0% |
| CGATCAAGGTGCACGCATGG+TGG | + | Chr6:20329377-20329396 | MsG0680031428.01.T01:CDS | 60.0% | |
| GAAATACGCGGCGCGTGCAA+TGG | + | Chr6:20330305-20330324 | MsG0680031428.01.T01:CDS | 60.0% | |
| TGCCGATCAAGGTGCACGCA+TGG | + | Chr6:20329374-20329393 | MsG0680031428.01.T01:CDS | 60.0% | |
| ACTGGCACCTCCCGTGACGA+TGG | - | Chr6:20329325-20329344 | None:intergenic | 65.0% | |
| ATACGCGGCGCGTGCAATGG+TGG | + | Chr6:20330308-20330327 | MsG0680031428.01.T01:CDS | 65.0% | |
| CTGAATCCATTGGCGCCCGC+AGG | + | Chr6:20329439-20329458 | MsG0680031428.01.T01:CDS | 65.0% | |
| GTGTGCACAGCGAGCGTCCT+GGG | + | Chr6:20330354-20330373 | MsG0680031428.01.T01:CDS | 65.0% | |
| TGTGTGCACAGCGAGCGTCC+TGG | + | Chr6:20330353-20330372 | MsG0680031428.01.T01:CDS | 65.0% | |
| ! | AATGGTGGAGGGGCGCGTGA+GGG | + | Chr6:20330323-20330342 | MsG0680031428.01.T01:CDS | 65.0% |
| !! | ACGGGAGGTGCCAGTGGCAT+TGG | + | Chr6:20329330-20329349 | MsG0680031428.01.T01:CDS | 65.0% |
| !! | ATCGTCACGGGAGGTGCCAG+TGG | + | Chr6:20329324-20329343 | MsG0680031428.01.T01:CDS | 65.0% |
| GCGAGCGTCCTGGGTAGCGT+AGG | + | Chr6:20330363-20330382 | MsG0680031428.01.T01:CDS | 70.0% | |
| ! | ATGGTGGAGGGGCGCGTGAG+GGG | + | Chr6:20330324-20330343 | MsG0680031428.01.T01:CDS | 70.0% |
| ! | CAATGGTGGAGGGGCGCGTG+AGG | + | Chr6:20330322-20330341 | MsG0680031428.01.T01:CDS | 70.0% |
| ! | CGGCGCGTGCAATGGTGGAG+GGG | + | Chr6:20330313-20330332 | MsG0680031428.01.T01:CDS | 70.0% |
| ! | GCGGCGCGTGCAATGGTGGA+GGG | + | Chr6:20330312-20330331 | MsG0680031428.01.T01:CDS | 70.0% |
| CGCGGCGCGTGCAATGGTGG+AGG | + | Chr6:20330311-20330330 | MsG0680031428.01.T01:CDS | 75.0% | |
| GGTGCACCTGCGGGCGCCAA+TGG | - | Chr6:20329448-20329467 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 20329106 | 20330994 | 20329106 | ID=MsG0680031428.01;Name=MsG0680031428.01 |
| Chr6 | mRNA | 20329106 | 20330994 | 20329106 | ID=MsG0680031428.01.T01;Parent=MsG0680031428.01;Name=MsG0680031428.01.T01;_AED=0.31;_eAED=0.31;_QI=164|1|1|1|1|1|2|275|269 |
| Chr6 | exon | 20329106 | 20329542 | 20329106 | ID=MsG0680031428.01.T01:exon:12917;Parent=MsG0680031428.01.T01 |
| Chr6 | exon | 20330183 | 20330994 | 20330183 | ID=MsG0680031428.01.T01:exon:12918;Parent=MsG0680031428.01.T01 |
| Chr6 | five_prime_UTR | 20329106 | 20329269 | 20329106 | ID=MsG0680031428.01.T01:five_prime_utr;Parent=MsG0680031428.01.T01 |
| Chr6 | CDS | 20329270 | 20329542 | 20329270 | ID=MsG0680031428.01.T01:cds;Parent=MsG0680031428.01.T01 |
| Chr6 | CDS | 20330183 | 20330719 | 20330183 | ID=MsG0680031428.01.T01:cds;Parent=MsG0680031428.01.T01 |
| Chr6 | three_prime_UTR | 20330720 | 20330994 | 20330720 | ID=MsG0680031428.01.T01:three_prime_utr;Parent=MsG0680031428.01.T01 |
| Gene Sequence |
| Protein sequence |
