AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000777.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000777.01.T01 MTR_4g009740 87.135 171 20 1 247 415 1120 1290 1.52e-88 292
MsG0180000777.01.T01 MTR_2g104400 67.273 165 52 2 247 409 1088 1252 2.36e-57 203
MsG0180000777.01.T01 MTR_2g104400 67.273 165 52 2 247 409 1125 1289 2.87e-57 203
MsG0180000777.01.T01 MTR_4g093580 94.937 79 3 1 172 250 110 187 1.05e-46 165
MsG0180000777.01.T01 MTR_4g093580 94.937 79 3 1 172 250 143 220 2.11e-46 165
MsG0180000777.01.T01 MTR_4g093580 94.737 76 3 1 175 250 1 75 2.46e-44 155
MsG0180000777.01.T01 MTR_4g093570 84.810 79 11 1 172 250 141 218 1.40e-39 146
MsG0180000777.01.T01 MTR_8g461290 89.041 73 1 1 343 415 56 121 3.23e-36 129
MsG0180000777.01.T01 MTR_8g042950 41.290 155 89 2 252 404 233 387 6.18e-27 111
MsG0180000777.01.T01 MTR_8g042960 41.558 154 88 2 252 403 594 747 4.68e-26 111
MsG0180000777.01.T01 MTR_8g042930 40.127 157 92 2 249 403 406 562 8.51e-26 110
MsG0180000777.01.T01 MTR_6g034725 89.744 39 4 0 211 249 1 39 1.79e-18 79.0
MsG0180000777.01.T01 MTR_3g065300 90.000 40 4 0 132 171 759 798 2.55e-14 75.5
MsG0180000777.01.T01 MTR_5g082250 68.421 57 13 2 57 111 22 75 1.20e-13 70.5
MsG0180000777.01.T01 MTR_4g094745 31.293 147 91 3 249 393 438 576 7.41e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000777.01.T01 AT1G15780 60.843 166 61 3 247 408 1190 1355 7.13e-52 187
MsG0180000777.01.T01 AT1G15780 60.843 166 61 3 247 408 1168 1333 7.16e-52 187
MsG0180000777.01.T01 AT2G10440 44.231 156 74 3 250 403 694 838 6.43e-31 125
MsG0180000777.01.T01 AT2G10440 42.169 166 73 3 250 403 774 928 9.02e-31 125
MsG0180000777.01.T01 AT5G64370 74.684 79 19 1 172 250 137 214 1.33e-26 110
MsG0180000777.01.T01 AT1G15780 58.000 100 38 3 247 342 1168 1267 1.36e-23 104

Find 98 sgRNAs with CRISPR-Local

Find 776 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATTTGATTGTAGGAATTT+TGG 0.123361 1:-11014845 MsG0180000777.01.T01:intron
CTCTCCACCGCTTCTAATTC+TGG 0.183017 1:-11025950 MsG0180000777.01.T01:intron
TGGAAACTTGTCTATGAATA+TGG 0.187776 1:+11013501 None:intergenic
GGAGAAGAATTAGGATAATT+TGG 0.201233 1:+11013523 None:intergenic
GGGAATCACGGCAATATAAT+TGG 0.209119 1:-11014639 MsG0180000777.01.T01:CDS
TGAACCACGGAGAGGTTATT+TGG 0.224777 1:-11014680 MsG0180000777.01.T01:CDS
TCAGTCTCTTTAACGAATAA+TGG 0.234601 1:+11016935 None:intergenic
TCCGAGTATGCACAACAATT+TGG 0.240706 1:-11013155 MsG0180000777.01.T01:CDS
CCCTCCTGTGTTGTTCAAAT+TGG 0.242473 1:-11025042 MsG0180000777.01.T01:CDS
CGCATCTGAGACACCATTAA+AGG 0.267120 1:+11017007 None:intergenic
GCTGCTGCTGACTGGGTTCA+TGG 0.281100 1:-11013730 MsG0180000777.01.T01:CDS
GCAGGTTAATCATGCCCTTT+TGG 0.305926 1:-11013833 MsG0180000777.01.T01:intron
TATTCAGCCTCTGCGCTTGC+TGG 0.317270 1:-11013551 MsG0180000777.01.T01:CDS
GTAAGAGCCCTCTTCAATAA+AGG 0.324327 1:+11018204 None:intergenic
GAACAACACAGGAGGGTTCT+TGG 0.333889 1:+11025049 None:intergenic
AGCACTCAGCCTATACATAT+TGG 0.340202 1:+11017728 None:intergenic
TTGCTTTACCCAATATGTAT+AGG 0.346360 1:-11017737 MsG0180000777.01.T01:CDS
ATGAATATGGGAGAAGAATT+AGG 0.346819 1:+11013514 None:intergenic
TCTCTATTTCGTTTAAGAAA+TGG 0.351637 1:+11012925 None:intergenic
CTCCTAGGCCAAAATTAAAA+AGG 0.352934 1:+11013021 None:intergenic
CTACAGCTGCTGCTGCTGAC+TGG 0.357834 1:-11013738 MsG0180000777.01.T01:CDS
AAGTCTTTGCTATATCCTTA+AGG 0.366345 1:+11013204 None:intergenic
TTCATATCCCTCTCAAGAAA+TGG 0.366645 1:+11014699 None:intergenic
CTCACAACCTATGTCCCTTA+AGG 0.372725 1:-11013219 MsG0180000777.01.T01:CDS
TTTGCTGTATTTCTTCCAAA+AGG 0.392527 1:+11013818 None:intergenic
AATGAATTATTCTTAAATAG+TGG 0.400998 1:-11013061 MsG0180000777.01.T01:three_prime_UTR
CTACTACTGTGTCAATAATT+CGG 0.407805 1:+11013788 None:intergenic
CTGCTGCTGACTGGGTTCAT+GGG 0.408222 1:-11013729 MsG0180000777.01.T01:CDS
TACATTTATGAAGGAAATCA+AGG 0.408480 1:-11018232 MsG0180000777.01.T01:intron
TGGAACACTGCCGTTGTGAT+TGG 0.411409 1:-11014660 MsG0180000777.01.T01:CDS
TCAGTTGATTCCCCGTCAAC+AGG 0.414927 1:+11014768 None:intergenic
GCATCTGAGACACCATTAAA+GGG 0.419912 1:+11017008 None:intergenic
GCTATTATTGAATAAACAAC+AGG 0.420767 1:+11012963 None:intergenic
GGAACATTCAGCTCTAAGTA+TGG 0.422754 1:-11013128 MsG0180000777.01.T01:CDS
TTATCTCACCGGGATTCAAC+TGG 0.430039 1:+11013481 None:intergenic
TACATATTGGGTAAAGCAAC+AGG 0.434949 1:+11017741 None:intergenic
ACCAAATTGTTGTGCATACT+CGG 0.438409 1:+11013154 None:intergenic
GCACTCAGCCTATACATATT+GGG 0.438754 1:+11017729 None:intergenic
GCTATATCCTTAAGGGACAT+AGG 0.441593 1:+11013212 None:intergenic
AGTCTTTGCTATATCCTTAA+GGG 0.444176 1:+11013205 None:intergenic
TACAGCTGCTGCTGCTGACT+GGG 0.448246 1:-11013737 MsG0180000777.01.T01:CDS
TAAGAGCCCTCTTCAATAAA+GGG 0.450156 1:+11018205 None:intergenic
TTGCTGTATTTCTTCCAAAA+GGG 0.460068 1:+11013819 None:intergenic
ACACACACGACACACTCTAC+AGG 0.462066 1:-11025997 MsG0180000777.01.T01:five_prime_UTR
GGAATCACGGCAATATAATT+GGG 0.467767 1:-11014638 MsG0180000777.01.T01:CDS
GGAACACTGCCGTTGTGATT+GGG 0.476635 1:-11014659 MsG0180000777.01.T01:CDS
GGAAACTTGTCTATGAATAT+GGG 0.483866 1:+11013502 None:intergenic
TCATATCCCTCTCAAGAAAT+GGG 0.484312 1:+11014700 None:intergenic
AGCAAGCGCAGAGGCTGAAT+AGG 0.488171 1:+11013553 None:intergenic
AATTTGCAGAACCTGTTGAC+GGG 0.505913 1:-11014779 MsG0180000777.01.T01:CDS
ATGGCACGAGTTCACATCTT+GGG 0.507054 1:-11013102 MsG0180000777.01.T01:CDS
ATCTGAATATGCTTCACTAC+AGG 0.514429 1:-11013656 MsG0180000777.01.T01:intron
AATAATGTTTGAAACCTCCT+AGG 0.515891 1:+11013006 None:intergenic
TTCACGATTTATGTTGCAGA+TGG 0.529130 1:-11016966 MsG0180000777.01.T01:CDS
ACAAGTTTCCAGTTGAATCC+CGG 0.532358 1:-11013489 MsG0180000777.01.T01:intron
TATAAGCCCATTTCTTGAGA+GGG 0.534996 1:-11014706 MsG0180000777.01.T01:CDS
TTTATGAAGGAAATCAAGGT+TGG 0.537108 1:-11018228 MsG0180000777.01.T01:intron
AACAATTTGACAAACTTCAA+AGG 0.542380 1:+11022842 None:intergenic
GAGTATGCACAACAATTTGG+TGG 0.553199 1:-11013152 MsG0180000777.01.T01:CDS
TTGATTGTGTAGGTATGAAG+AGG 0.554573 1:-11018348 MsG0180000777.01.T01:intron
AATGGCACGAGTTCACATCT+TGG 0.555231 1:-11013103 MsG0180000777.01.T01:CDS
GAAGAATTAGGATAATTTGG+AGG 0.555468 1:+11013526 None:intergenic
GACATAAGTAATGAAGATGT+TGG 0.555501 1:-11013766 MsG0180000777.01.T01:CDS
GGTTGGCCCTTTATTGAAGA+GGG 0.561450 1:-11018211 MsG0180000777.01.T01:CDS
AGGTTGTGAGAAATTACATA+AGG 0.561974 1:+11013232 None:intergenic
AAAGATGGGCTGAGAGACAC+AGG 0.565080 1:+11013682 None:intergenic
GCCGTTGTGATTGGGAATCA+CGG 0.569579 1:-11014651 MsG0180000777.01.T01:CDS
CTTTGCACTGAAGTATAACA+TGG 0.585333 1:-11014733 MsG0180000777.01.T01:CDS
TCTCGTGTAGAGAAACCAAA+TGG 0.585598 1:+11014816 None:intergenic
ACTTGTGATGCTTCTGCTCG+CGG 0.586313 1:-11013185 MsG0180000777.01.T01:CDS
TTATAAGCCCATTTCTTGAG+AGG 0.587724 1:-11014707 MsG0180000777.01.T01:CDS
GGAACCAGAATTAGAAGCGG+TGG 0.588450 1:+11025946 None:intergenic
CACACACGACACACTCTACA+GGG 0.589002 1:-11025996 MsG0180000777.01.T01:five_prime_UTR
AGGTTGGCCCTTTATTGAAG+AGG 0.590496 1:-11018212 MsG0180000777.01.T01:CDS
TTATGGCAGTAAGGGGAATG+AGG 0.594861 1:-11013291 MsG0180000777.01.T01:intron
ATTTCGTTTAAGAAATGGAG+AGG 0.597227 1:+11012930 None:intergenic
GCCAATTTGAACAACACAGG+AGG 0.601516 1:+11025041 None:intergenic
TCAGCTCTAAGTATGGAGAA+TGG 0.603721 1:-11013121 MsG0180000777.01.T01:CDS
GCAATATAATTGGGATACAC+AGG 0.604005 1:-11014629 MsG0180000777.01.T01:CDS
GAATTTGCAGAACCTGTTGA+CGG 0.607240 1:-11014780 MsG0180000777.01.T01:CDS
GAGGATTAGAGAAACTGTTG+AGG 0.614743 1:-11018329 MsG0180000777.01.T01:CDS
TCTCTACACGAGAGAAGAAG+TGG 0.622564 1:-11014806 MsG0180000777.01.T01:CDS
AATTTGACAAACTTCAAAGG+AGG 0.629694 1:+11022845 None:intergenic
CCAATTTGAACAACACAGGA+GGG 0.634346 1:+11025042 None:intergenic
AATGAAAGAACATTTGACAA+TGG 0.635191 1:+11013705 None:intergenic
TATGCACAACAATTTGGTGG+AGG 0.647411 1:-11013149 MsG0180000777.01.T01:CDS
ACAAACTTGTGATGAAGACA+AGG 0.658149 1:-11018149 MsG0180000777.01.T01:intron
CTTGAGAGGGATATGAACCA+CGG 0.660131 1:-11014693 MsG0180000777.01.T01:CDS
TATAATTGGGATACACAGGA+AGG 0.665482 1:-11014625 MsG0180000777.01.T01:intron
CATCTGAGACACCATTAAAG+GGG 0.671973 1:+11017009 None:intergenic
ATTTGCAGAACCTGTTGACG+GGG 0.676991 1:-11014778 MsG0180000777.01.T01:CDS
AGTGCCAATTTGAACAACAC+AGG 0.682213 1:+11025038 None:intergenic
GGATCTTTCAGAGAAAGCAA+AGG 0.688041 1:-11013270 MsG0180000777.01.T01:CDS
GGAGGAACCAGCAAGCGCAG+AGG 0.692084 1:+11013544 None:intergenic
AAAGGAACCAGAATTAGAAG+CGG 0.693268 1:+11025943 None:intergenic
GCCGTGATTCCCAATCACAA+CGG 0.710117 1:+11014650 None:intergenic
GAGGGATATGAACCACGGAG+AGG 0.717220 1:-11014688 MsG0180000777.01.T01:CDS
TGTTCCAAATAACCTCTCCG+TGG 0.747550 1:+11014676 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAA+AGG + Chr1:11016438-11016457 None:intergenic 0.0%
!! AAAATAAAAAGTAAAAATGA+TGG + Chr1:11021763-11021782 None:intergenic 10.0%
!! ATCTAAAAAAACTAATTTAA+AGG + Chr1:11013368-11013387 None:intergenic 10.0%
!! TACTTAAGTAAATTTAAATT+TGG + Chr1:11015180-11015199 None:intergenic 10.0%
!!! AAAATTTAAAATTTGATTGT+AGG - Chr1:11024068-11024087 MsG0180000777.01.T01:intron 10.0%
!!! ATGAATTTTATATAATCTTA+TGG - Chr1:11015257-11015276 MsG0180000777.01.T01:intron 10.0%
!!! ATTTAAAATCTCTATAAAAA+TGG + Chr1:11013292-11013311 None:intergenic 10.0%
!!! GTAAAATTAATTTTATTATC+TGG + Chr1:11020260-11020279 None:intergenic 10.0%
!!! TACTATTCTTTTTATTTTTT+GGG + Chr1:11017234-11017253 None:intergenic 10.0%
!!! TGATTTTTTTTTTTGTTTTT+GGG - Chr1:11013490-11013509 MsG0180000777.01.T01:CDS 10.0%
!!! TTGGTAAATTTAAATATTTT+GGG + Chr1:11018420-11018439 None:intergenic 10.0%
!!! TTTGGTAAATTTAAATATTT+TGG + Chr1:11018421-11018440 None:intergenic 10.0%
!!! TTTTTTTTTCTTCTTTAAAT+AGG - Chr1:11014686-11014705 MsG0180000777.01.T01:CDS 10.0%
!! AAAAAAAAAAAAAAAGGATG+AGG + Chr1:11016433-11016452 None:intergenic 15.0%
!! AAAAAACAGAAAGAAAAAAA+AGG + Chr1:11015941-11015960 None:intergenic 15.0%
!! AAAATAATAGAGAATGAAAT+GGG + Chr1:11016791-11016810 None:intergenic 15.0%
!! AAAGGAAAAAAGAATTATAT+TGG + Chr1:11014054-11014073 None:intergenic 15.0%
!! AATGAATTATTCTTAAATAG+TGG - Chr1:11025860-11025879 MsG0180000777.01.T01:intron 15.0%
!! ACATAAAAGATAACATATTA+CGG - Chr1:11018029-11018048 MsG0180000777.01.T01:intron 15.0%
!! ATTTAAATTTGGAAAAACAA+AGG + Chr1:11015169-11015188 None:intergenic 15.0%
!! ATTTGCACTTAAATTAATTT+GGG - Chr1:11015692-11015711 MsG0180000777.01.T01:intron 15.0%
!! CTAATATAAATCATAACAAA+TGG + Chr1:11016210-11016229 None:intergenic 15.0%
!! TAAACAAATAAGAAGTAAAA+GGG + Chr1:11016877-11016896 None:intergenic 15.0%
!! TAATTATATCTATAGTAACA+TGG - Chr1:11014332-11014351 MsG0180000777.01.T01:intron 15.0%
!! TACTTAATAATAACGTTTAT+AGG - Chr1:11022855-11022874 MsG0180000777.01.T01:CDS 15.0%
!! TATTTGCACTTAAATTAATT+TGG - Chr1:11015691-11015710 MsG0180000777.01.T01:intron 15.0%
!! TGTATTAAAAAAAATTACAG+TGG + Chr1:11024958-11024977 None:intergenic 15.0%
!! TTAAACAAATAAGAAGTAAA+AGG + Chr1:11016878-11016897 None:intergenic 15.0%
!! TTTACGAAATAAAACAATAA+AGG + Chr1:11021815-11021834 None:intergenic 15.0%
!!! AAAATGTAATTTGATAACAA+CGG + Chr1:11018393-11018412 None:intergenic 15.0%
!!! AAAATTGACTTATATGTTTT+TGG - Chr1:11019240-11019259 MsG0180000777.01.T01:intron 15.0%
!!! AAATAAGGAAGAATAAATTT+TGG - Chr1:11023546-11023565 MsG0180000777.01.T01:intron 15.0%
!!! AAATTGACTTATATGTTTTT+GGG - Chr1:11019241-11019260 MsG0180000777.01.T01:intron 15.0%
!!! ACTAAGTAATTTTAAGAATT+TGG - Chr1:11019429-11019448 MsG0180000777.01.T01:intron 15.0%
!!! ACTATTCTTTTTATTTTTTG+GGG + Chr1:11017233-11017252 None:intergenic 15.0%
!!! ACTATTTATAAAAATTTTGC+AGG - Chr1:11023959-11023978 MsG0180000777.01.T01:intron 15.0%
!!! CTACTATTCTTTTTATTTTT+TGG + Chr1:11017235-11017254 None:intergenic 15.0%
!!! CTATTTATAAAAATTTTGCA+GGG - Chr1:11023960-11023979 MsG0180000777.01.T01:intron 15.0%
!!! CTGATTTTTTTTTTTGTTTT+TGG - Chr1:11013489-11013508 MsG0180000777.01.T01:intron 15.0%
!!! GTTTTGATAATTTTGTTTTT+TGG - Chr1:11020954-11020973 MsG0180000777.01.T01:intron 15.0%
!!! TATCATCATTTTTAACTTTT+CGG - Chr1:11014164-11014183 MsG0180000777.01.T01:intron 15.0%
!!! TATGTTATCATATCATTTTT+TGG - Chr1:11023086-11023105 MsG0180000777.01.T01:intron 15.0%
!!! TCGTTTTTTTTTTCAATTAT+TGG - Chr1:11013448-11013467 MsG0180000777.01.T01:intron 15.0%
!!! TTAATAAACTTTTATATGAC+AGG + Chr1:11022815-11022834 None:intergenic 15.0%
!!! TTTTTTTTGAAAGAAAGATT+AGG - Chr1:11017804-11017823 MsG0180000777.01.T01:intron 15.0%
!! AAACATATTATATCTTCACA+TGG + Chr1:11015563-11015582 None:intergenic 20.0%
!! AAAGACCAAATTGTAAAAAT+GGG + Chr1:11018950-11018969 None:intergenic 20.0%
!! AAGTAGTAATGATTAATGAA+GGG - Chr1:11014121-11014140 MsG0180000777.01.T01:intron 20.0%
!! AATTTAATTGATTATACACG+TGG - Chr1:11017932-11017951 MsG0180000777.01.T01:intron 20.0%
!! ACTCCATATATATATATAGA+GGG + Chr1:11018547-11018566 None:intergenic 20.0%
!! ACTTTATTGTGAAATTAGTT+TGG - Chr1:11013606-11013625 MsG0180000777.01.T01:intron 20.0%
!! AGCATATTATTACAACATTA+CGG + Chr1:11013949-11013968 None:intergenic 20.0%
!! AGTGTACTAACTTTATAATA+TGG - Chr1:11023212-11023231 MsG0180000777.01.T01:intron 20.0%
!! ATAAATGTAAAGCAAAACAA+TGG + Chr1:11020678-11020697 None:intergenic 20.0%
!! ATAGAAAACATAGAATGAAA+TGG + Chr1:11016375-11016394 None:intergenic 20.0%
!! ATATTAAAAAGGACCTTATT+AGG + Chr1:11020321-11020340 None:intergenic 20.0%
!! ATATTGAAATGATTGTTATC+TGG - Chr1:11019815-11019834 MsG0180000777.01.T01:intron 20.0%
!! ATCAAAACATTAAACAGAAT+TGG - Chr1:11016009-11016028 MsG0180000777.01.T01:intron 20.0%
!! ATCTAAATCTAAATAACAGA+TGG + Chr1:11015734-11015753 None:intergenic 20.0%
!! ATGAATGATAAATTGTTTAC+TGG + Chr1:11017851-11017870 None:intergenic 20.0%
!! ATTAAAAACGAAAAAAGACA+AGG + Chr1:11013751-11013770 None:intergenic 20.0%
!! ATTATAAAGTTAGTACACTT+TGG + Chr1:11023211-11023230 None:intergenic 20.0%
!! ATTATATTGCAAAGACTAAT+AGG + Chr1:11018189-11018208 None:intergenic 20.0%
!! ATTCTAAATTCTGTATGATA+AGG - Chr1:11019688-11019707 MsG0180000777.01.T01:intron 20.0%
!! ATTGCCATTAATATATGTTA+TGG - Chr1:11024494-11024513 MsG0180000777.01.T01:intron 20.0%
!! CATTAATTACATACAATCAA+TGG + Chr1:11023755-11023774 None:intergenic 20.0%
!! CATTGTGTAATATGAATATT+GGG + Chr1:11017456-11017475 None:intergenic 20.0%
!! CTTTGTGGTTAAATTAATTT+GGG - Chr1:11016168-11016187 MsG0180000777.01.T01:intron 20.0%
!! GAAAATAATAGAGAATGAAA+TGG + Chr1:11016792-11016811 None:intergenic 20.0%
!! GCTAACTCAAATTAATTTAA+CGG + Chr1:11015496-11015515 None:intergenic 20.0%
!! GTGGAATATAATTGAAATAA+GGG - Chr1:11021144-11021163 MsG0180000777.01.T01:intron 20.0%
!! TAAATTGGTTATGTTTATCT+TGG - Chr1:11016321-11016340 MsG0180000777.01.T01:intron 20.0%
!! TAGAAAACATAGAATGAAAT+GGG + Chr1:11016374-11016393 None:intergenic 20.0%
!! TATAGATTGCTAGAAATAAA+AGG - Chr1:11020283-11020302 MsG0180000777.01.T01:intron 20.0%
!! TATTATTCTACATTATCGTT+GGG - Chr1:11018795-11018814 MsG0180000777.01.T01:intron 20.0%
!! TATTTCAATTCAAACATTGT+AGG + Chr1:11023687-11023706 None:intergenic 20.0%
!! TCATCTAAACAAATATACAT+AGG - Chr1:11022612-11022631 MsG0180000777.01.T01:intron 20.0%
!! TCATTGTGTAATATGAATAT+TGG + Chr1:11017457-11017476 None:intergenic 20.0%
!! TCTTTGTGGTTAAATTAATT+TGG - Chr1:11016167-11016186 MsG0180000777.01.T01:intron 20.0%
!! TGAAATATATCTTTAACTAC+TGG - Chr1:11021099-11021118 MsG0180000777.01.T01:intron 20.0%
!! TGATTAAATAAGAAACGAAA+GGG + Chr1:11015993-11016012 None:intergenic 20.0%
!! TGTGGAATATAATTGAAATA+AGG - Chr1:11021143-11021162 MsG0180000777.01.T01:intron 20.0%
!! TTAACTTAATTGGATTTATG+TGG - Chr1:11021125-11021144 MsG0180000777.01.T01:intron 20.0%
!! TTATGCTTATTGAAGAAAAA+AGG + Chr1:11023895-11023914 None:intergenic 20.0%
!! TTATTATCTGGATATGTTTA+TGG + Chr1:11020248-11020267 None:intergenic 20.0%
!! TTATTATTCTACATTATCGT+TGG - Chr1:11018794-11018813 MsG0180000777.01.T01:intron 20.0%
!! TTCTTCTTTAAATAGGAAAT+TGG - Chr1:11014693-11014712 MsG0180000777.01.T01:CDS 20.0%
!! TTGATTAAATAAGAAACGAA+AGG + Chr1:11015994-11016013 None:intergenic 20.0%
!! TTGTATTAATATGTTCTTTG+TGG - Chr1:11016153-11016172 MsG0180000777.01.T01:intron 20.0%
!! TTTAGAGAAATATGGAATAT+CGG + Chr1:11024710-11024729 None:intergenic 20.0%
!! TTTATATAAACAAACATCGA+AGG + Chr1:11024051-11024070 None:intergenic 20.0%
!! TTTCCCTCTATATATATATA+TGG - Chr1:11018541-11018560 MsG0180000777.01.T01:intron 20.0%
!! TTTCCTACAAAACAAATTAA+CGG + Chr1:11017554-11017573 None:intergenic 20.0%
!!! AAAAAGGTTCTTTTTGATTT+TGG - Chr1:11018847-11018866 MsG0180000777.01.T01:intron 20.0%
!!! AAATTTGATTGTAGGAATTT+TGG - Chr1:11024076-11024095 MsG0180000777.01.T01:intron 20.0%
!!! AATAAGGTCCTTTTTAATAT+AGG - Chr1:11020321-11020340 MsG0180000777.01.T01:intron 20.0%
!!! AATATTGAACTGATTTCATT+AGG - Chr1:11019540-11019559 MsG0180000777.01.T01:intron 20.0%
!!! AATTTCCCATTTTTACAATT+TGG - Chr1:11018942-11018961 MsG0180000777.01.T01:intron 20.0%
!!! AATTTTTTCAAGACCTAATA+AGG - Chr1:11020207-11020226 MsG0180000777.01.T01:intron 20.0%
!!! AGTATTTAAAGTGTGATTTA+AGG - Chr1:11015196-11015215 MsG0180000777.01.T01:intron 20.0%
!!! ATCTATATTTTACGCATAAT+TGG + Chr1:11015370-11015389 None:intergenic 20.0%
!!! ATTTTATGATCATAGCTTTT+TGG - Chr1:11023053-11023072 MsG0180000777.01.T01:intron 20.0%
!!! CATATTCAGATTTTAAAGAT+GGG + Chr1:11025256-11025275 None:intergenic 20.0%
!!! CTTTATTGTGAAATTAGTTT+GGG - Chr1:11013607-11013626 MsG0180000777.01.T01:intron 20.0%
!!! GTTTTTCTGTGAATATTTAA+TGG - Chr1:11023313-11023332 MsG0180000777.01.T01:intron 20.0%
!!! TAGTGTTATTATATACGTTA+TGG - Chr1:11025613-11025632 MsG0180000777.01.T01:intron 20.0%
!!! TATGAAGACCTTTTTAATTT+TGG - Chr1:11025892-11025911 MsG0180000777.01.T01:intron 20.0%
!!! TATTGATAGTATTGTACTAT+AGG - Chr1:11022582-11022601 MsG0180000777.01.T01:intron 20.0%
!!! TCAATATGTTCTGTAATTTT+TGG - Chr1:11013236-11013255 MsG0180000777.01.T01:CDS 20.0%
!!! TCAATTTTATAAAACCAAAG+TGG + Chr1:11020017-11020036 None:intergenic 20.0%
!!! TCATTTTATGTTTGATACTT+TGG - Chr1:11017867-11017886 MsG0180000777.01.T01:intron 20.0%
!!! TCCAATTTTGTTATGTATTT+TGG + Chr1:11023029-11023048 None:intergenic 20.0%
!!! TCTGTAATTTTTGGATATTA+GGG - Chr1:11013245-11013264 MsG0180000777.01.T01:CDS 20.0%
!!! TCTTTGGTTTTATATAGAAA+CGG - Chr1:11021401-11021420 MsG0180000777.01.T01:intron 20.0%
!!! TGCTTTAATTTTGCTAATTT+CGG - Chr1:11025483-11025502 MsG0180000777.01.T01:intron 20.0%
!!! TGGTTATGTTTATTTTGTTA+TGG - Chr1:11015842-11015861 MsG0180000777.01.T01:intron 20.0%
!!! TTCTGTAATTTTTGGATATT+AGG - Chr1:11013244-11013263 MsG0180000777.01.T01:CDS 20.0%
!!! TTGATTTGCTTTTCTAAAAA+GGG - Chr1:11024756-11024775 MsG0180000777.01.T01:intron 20.0%
!!! TTTAGTGAGTATAAAGTATT+AGG + Chr1:11023837-11023856 None:intergenic 20.0%
!!! TTTGCATTTTTTCAATTTTC+AGG - Chr1:11013059-11013078 MsG0180000777.01.T01:three_prime_UTR 20.0%
!!! TTTGTGGTTAAATTAATTTG+GGG - Chr1:11016169-11016188 MsG0180000777.01.T01:intron 20.0%
!!! TTTGTTTTTTTGATGAGTAT+TGG - Chr1:11019204-11019223 MsG0180000777.01.T01:intron 20.0%
!!! TTTTTTGTTTTCTGTGATTT+TGG - Chr1:11019035-11019054 MsG0180000777.01.T01:intron 20.0%
!!! TTTTTTTGTTTTTGGGATTA+GGG - Chr1:11013497-11013516 MsG0180000777.01.T01:CDS 20.0%
!!! TTTTTTTTGTTTTTGGGATT+AGG - Chr1:11013496-11013515 MsG0180000777.01.T01:CDS 20.0%
! AAAAAATCAGTTGCAAAATC+TGG + Chr1:11025300-11025319 None:intergenic 25.0%
! AAAAAATTACAGTGGCTTAA+TGG + Chr1:11024950-11024969 None:intergenic 25.0%
! AAAAATCAGTTGCAAAATCT+GGG + Chr1:11025299-11025318 None:intergenic 25.0%
! AAAAATTACAGTGGCTTAAT+GGG + Chr1:11024949-11024968 None:intergenic 25.0%
! AAAACAAAGGAAATTTGAAG+TGG + Chr1:11015156-11015175 None:intergenic 25.0%
! AAAACAATAGAGAATGACAT+TGG + Chr1:11015882-11015901 None:intergenic 25.0%
! AAAACCTAAATCATAACAGA+TGG + Chr1:11015530-11015549 None:intergenic 25.0%
! AAACTCATAAAAGCAATTAG+AGG - Chr1:11024809-11024828 MsG0180000777.01.T01:intron 25.0%
! AAAGAATACAATATCCAATC+AGG + Chr1:11023124-11023143 None:intergenic 25.0%
! AACAATTTGACAAACTTCAA+AGG + Chr1:11016082-11016101 None:intergenic 25.0%
! AACTCATAAAAGCAATTAGA+GGG - Chr1:11024810-11024829 MsG0180000777.01.T01:intron 25.0%
! AACTGTAAACTAATCAAACA+TGG + Chr1:11024914-11024933 None:intergenic 25.0%
! AACTTTCATTTAGTGTTAGT+GGG - Chr1:11017279-11017298 MsG0180000777.01.T01:intron 25.0%
! AAGGTGATAAAACACAAATA+AGG + Chr1:11025341-11025360 None:intergenic 25.0%
! AAGTTTAACAGTTTAAAGGA+TGG + Chr1:11024526-11024545 None:intergenic 25.0%
! AATCTTAAGTTCTTGTGATT+TGG - Chr1:11019850-11019869 MsG0180000777.01.T01:intron 25.0%
! AATGAAAGAACATTTGACAA+TGG + Chr1:11025219-11025238 None:intergenic 25.0%
! AATGAAATGAAGTAAGTAGT+GGG + Chr1:11018581-11018600 None:intergenic 25.0%
! AATGTGATATCTGCATATTA+TGG - Chr1:11022314-11022333 MsG0180000777.01.T01:intron 25.0%
! AATTATTCTAGCATACATGT+AGG - Chr1:11024684-11024703 MsG0180000777.01.T01:intron 25.0%
! ACACTAAAAGATATGAATAG+AGG + Chr1:11023810-11023829 None:intergenic 25.0%
! ACATGATATTGCCTATAATT+TGG + Chr1:11017995-11018014 None:intergenic 25.0%
! ACATTAATCAGAAATTGCTA+AGG - Chr1:11016515-11016534 MsG0180000777.01.T01:intron 25.0%
! ACTGTAAACTAATCAAACAT+GGG + Chr1:11024913-11024932 None:intergenic 25.0%
! ACTTCACATTAACTTCATAA+CGG + Chr1:11023380-11023399 None:intergenic 25.0%
! ACTTTATCCTTGATATTCAA+AGG - Chr1:11022157-11022176 MsG0180000777.01.T01:intron 25.0%
! AGACCAAATAAGAAACAAAA+GGG + Chr1:11016493-11016512 None:intergenic 25.0%
! AGGGTAAGATTATATTAACA+CGG + Chr1:11015974-11015993 None:intergenic 25.0%
! AGGGTGAGATTAATTTATTA+CGG + Chr1:11013780-11013799 None:intergenic 25.0%
! AGTAGTAATGATTAATGAAG+GGG - Chr1:11014122-11014141 MsG0180000777.01.T01:intron 25.0%
! AGTGTAAAAGATGATTGATT+TGG - Chr1:11018714-11018733 MsG0180000777.01.T01:intron 25.0%
! ATATATATATAGAGGGAAAG+AGG + Chr1:11018540-11018559 None:intergenic 25.0%
! ATGATAGAGAAATACTTCTA+TGG - Chr1:11018106-11018125 MsG0180000777.01.T01:intron 25.0%
! ATGATCAAATAAGAAACGAA+AGG + Chr1:11013800-11013819 None:intergenic 25.0%
! ATTAGCAAAATTAAAGCATG+TGG + Chr1:11025481-11025500 None:intergenic 25.0%
! ATTTGAATGAGAATGACATT+TGG - Chr1:11019594-11019613 MsG0180000777.01.T01:intron 25.0%
! CAAAGACCAAATTGTAAAAA+TGG + Chr1:11018951-11018970 None:intergenic 25.0%
! CAAATTCTGTTTCAAATACA+GGG + Chr1:11024469-11024488 None:intergenic 25.0%
! CACTAAAAGATATGAATAGA+GGG + Chr1:11023809-11023828 None:intergenic 25.0%
! CACTCCATATATATATATAG+AGG + Chr1:11018548-11018567 None:intergenic 25.0%
! CCAAAAGTTTAACAGTTTAA+AGG + Chr1:11024530-11024549 None:intergenic 25.0%
! CCATTAATATATGTTATGGT+AGG - Chr1:11024498-11024517 MsG0180000777.01.T01:intron 25.0%
! CCTACCATAACATATATTAA+TGG + Chr1:11024501-11024520 None:intergenic 25.0%
! CTAAATTAGCTAATTGTACA+GGG + Chr1:11021615-11021634 None:intergenic 25.0%
! CTCTATATATATATATGGAG+TGG - Chr1:11018546-11018565 MsG0180000777.01.T01:intron 25.0%
! CTTTGCAGTGAAATTAATTT+GGG - Chr1:11016635-11016654 MsG0180000777.01.T01:intron 25.0%
! GAAGTAGTAATGATTAATGA+AGG - Chr1:11014120-11014139 MsG0180000777.01.T01:intron 25.0%
! GAGCTTGCATTTAATAAAAT+AGG + Chr1:11016710-11016729 None:intergenic 25.0%
! GATTCTAAATGTTGTATCTA+AGG - Chr1:11019710-11019729 MsG0180000777.01.T01:intron 25.0%
! GCAGCAAAATTTAAAGATAA+GGG + Chr1:11025576-11025595 None:intergenic 25.0%
! GCCAAAATACATAACAAAAT+TGG - Chr1:11023025-11023044 MsG0180000777.01.T01:intron 25.0%
! GCTATTATTGAATAAACAAC+AGG + Chr1:11025961-11025980 None:intergenic 25.0%
! GTATCTTAATGAATTGAACA+TGG - Chr1:11022453-11022472 MsG0180000777.01.T01:intron 25.0%
! GTCTATCTACTAAACTAAAT+AGG - Chr1:11018449-11018468 MsG0180000777.01.T01:intron 25.0%
! GTGTTAATACACACATAAAT+TGG - Chr1:11016306-11016325 MsG0180000777.01.T01:intron 25.0%
! GTTCTCATGATATTCATAAA+TGG - Chr1:11020844-11020863 MsG0180000777.01.T01:intron 25.0%
! GTTTGATCATGATAATATGT+AGG + Chr1:11021306-11021325 None:intergenic 25.0%
! TAAAAAAATGAAGGAAGAAG+TGG - Chr1:11014782-11014801 MsG0180000777.01.T01:CDS 25.0%
! TAACTTTCATTTAGTGTTAG+TGG - Chr1:11017278-11017297 MsG0180000777.01.T01:intron 25.0%
! TACAAATGCATAAACTTGTA+TGG + Chr1:11019977-11019996 None:intergenic 25.0%
! TACATCTAAATTGAGCAATT+TGG + Chr1:11014255-11014274 None:intergenic 25.0%
! TACATTTATGAAGGAAATCA+AGG - Chr1:11020689-11020708 MsG0180000777.01.T01:intron 25.0%
! TAGACCAAATAAGAAACAAA+AGG + Chr1:11016494-11016513 None:intergenic 25.0%
! TCAGGTGAATATTAATAATG+AGG - Chr1:11017124-11017143 MsG0180000777.01.T01:intron 25.0%
! TCTAAATTAGCTAATTGTAC+AGG + Chr1:11021616-11021635 None:intergenic 25.0%
! TCTCTATTTCGTTTAAGAAA+TGG + Chr1:11025999-11026018 None:intergenic 25.0%
! TCTTTGCAGTGAAATTAATT+TGG - Chr1:11016634-11016653 MsG0180000777.01.T01:intron 25.0%
! TGATACTTTGGTAAAAATAG+TGG - Chr1:11017879-11017898 MsG0180000777.01.T01:intron 25.0%
! TGATCAAATAAGAAACGAAA+GGG + Chr1:11013799-11013818 None:intergenic 25.0%
! TGATCAATTGATGTTAAAGA+TGG - Chr1:11019383-11019402 MsG0180000777.01.T01:intron 25.0%
! TTAGCAAAATTAAAGCATGT+GGG + Chr1:11025480-11025499 None:intergenic 25.0%
! TTTATTAGATAGCTGAAAGA+CGG + Chr1:11024364-11024383 None:intergenic 25.0%
!! AATGGAATCAAATTCTCTTT+TGG + Chr1:11023619-11023638 None:intergenic 25.0%
!! AATTCATTCTGCAATTTTAG+AGG - Chr1:11013328-11013347 MsG0180000777.01.T01:intron 25.0%
!! AGATTTTCAGCAAATTTTTC+AGG + Chr1:11020131-11020150 None:intergenic 25.0%
!! AGGTTGCATTTTCATAAAAT+AGG + Chr1:11015793-11015812 None:intergenic 25.0%
!! ATGGTAAACTTTTATGGTAT+TGG + Chr1:11014894-11014913 None:intergenic 25.0%
!! ATTATAATTTGAGATAACCC+TGG + Chr1:11023281-11023300 None:intergenic 25.0%
!! ATTCTTGTTGTCTGTATAAT+GGG - Chr1:11023353-11023372 MsG0180000777.01.T01:intron 25.0%
!! ATTTAGTTTAGTAGATAGAC+TGG + Chr1:11018449-11018468 None:intergenic 25.0%
!! CATTTGGAATATGTTTGATT+TGG - Chr1:11024859-11024878 MsG0180000777.01.T01:intron 25.0%
!! CCTTTAAACTGTTAAACTTT+TGG - Chr1:11024527-11024546 MsG0180000777.01.T01:intron 25.0%
!! GTTTTGCTTTACATTTATGA+AGG - Chr1:11020680-11020699 MsG0180000777.01.T01:intron 25.0%
!! TATTCTTGTTGTCTGTATAA+TGG - Chr1:11023352-11023371 MsG0180000777.01.T01:intron 25.0%
!! TTTAACAAACTTCAAGTTTG+TGG + Chr1:11022128-11022147 None:intergenic 25.0%
!! TTTTGCAAAGATTGAAAATG+TGG - Chr1:11020378-11020397 MsG0180000777.01.T01:intron 25.0%
!!! AAACCGTTAATTTGTTTTGT+AGG - Chr1:11017548-11017567 MsG0180000777.01.T01:intron 25.0%
!!! AACTTTTATGGTATTGGATA+AGG + Chr1:11014888-11014907 None:intergenic 25.0%
!!! AAGTTTTGAGACAAAATATC+AGG - Chr1:11020904-11020923 MsG0180000777.01.T01:intron 25.0%
!!! ATAGAAGTATTTCTCTATCA+TGG + Chr1:11018107-11018126 None:intergenic 25.0%
!!! ATGGAAAGTTGTTTTCTAAT+GGG - Chr1:11022472-11022491 MsG0180000777.01.T01:intron 25.0%
!!! ATTTATTTTTGTCGATGTTG+AGG - Chr1:11022282-11022301 MsG0180000777.01.T01:intron 25.0%
!!! CATTTTTACAATTTGGTCTT+TGG - Chr1:11018949-11018968 MsG0180000777.01.T01:intron 25.0%
!!! CTACTGGTTTTTAACTTAAT+TGG - Chr1:11021115-11021134 MsG0180000777.01.T01:intron 25.0%
!!! CTATGCTTTTAAAATTAGCA+GGG - Chr1:11015419-11015438 MsG0180000777.01.T01:intron 25.0%
!!! GCATATTCAGATTTTAAAGA+TGG + Chr1:11025257-11025276 None:intergenic 25.0%
!!! GGTTCTGTTTAATTTGATTT+TGG - Chr1:11019262-11019281 MsG0180000777.01.T01:intron 25.0%
!!! GTTATTTCTTTTTGAAACCA+GGG - Chr1:11019495-11019514 MsG0180000777.01.T01:intron 25.0%
!!! GTTGATTTGCTTTTCTAAAA+AGG - Chr1:11024755-11024774 MsG0180000777.01.T01:intron 25.0%
!!! GTTGTCTTCTATTTTGTTTT+TGG - Chr1:11016815-11016834 MsG0180000777.01.T01:intron 25.0%
!!! GTTTTATTTCGTAAATACAG+AGG - Chr1:11021820-11021839 MsG0180000777.01.T01:intron 25.0%
!!! TGAAATGCAAATTTTTAAGC+AGG + Chr1:11019653-11019672 None:intergenic 25.0%
!!! TGTTATTTCTTTTTGAAACC+AGG - Chr1:11019494-11019513 MsG0180000777.01.T01:intron 25.0%
!!! TTGGTTGCATGTTTTAAAAA+AGG - Chr1:11018831-11018850 MsG0180000777.01.T01:intron 25.0%
!!! TTTAATTTGATTTTGGTTGC+AGG - Chr1:11019269-11019288 MsG0180000777.01.T01:intron 25.0%
!!! TTTAGTTTTTGTGATCTGAT+TGG - Chr1:11020150-11020169 MsG0180000777.01.T01:intron 25.0%
!!! TTTTAACTTTTCGGTATAGT+AGG - Chr1:11014173-11014192 MsG0180000777.01.T01:intron 25.0%
AAACGAATTATACCTTCACA+TGG + Chr1:11016248-11016267 None:intergenic 30.0%
AAACTAACAACATAACACCA+CGG + Chr1:11023432-11023451 None:intergenic 30.0%
AAAGACGGTTTAGAGAAATA+TGG + Chr1:11024718-11024737 None:intergenic 30.0%
AATATGGAATCACTGTTTGA+TGG - Chr1:11023228-11023247 MsG0180000777.01.T01:intron 30.0%
AATCCTTAAAGTCATCACTA+AGG - Chr1:11018206-11018225 MsG0180000777.01.T01:CDS 30.0%
AATGCATTTATGCTGTTCTT+GGG - Chr1:11021429-11021448 MsG0180000777.01.T01:intron 30.0%
AATTTGACAAACTTCAAAGG+AGG + Chr1:11016079-11016098 None:intergenic 30.0%
ACAAGGGTTGAAAACAATTT+CGG + Chr1:11024564-11024583 None:intergenic 30.0%
ACCAAAACCATACAATGAAT+AGG + Chr1:11023579-11023598 None:intergenic 30.0%
ACCAATTCATATTAAGGTGA+AGG + Chr1:11022189-11022208 None:intergenic 30.0%
ACCTTCACCTTAATATGAAT+TGG - Chr1:11022185-11022204 MsG0180000777.01.T01:intron 30.0%
AGAAAGAAAGAAGAGTTACA+AGG - Chr1:11014599-11014618 MsG0180000777.01.T01:intron 30.0%
AGACATGTTAAACTCTTATC+TGG - Chr1:11024643-11024662 MsG0180000777.01.T01:intron 30.0%
AGGTATATTGATCTTCTTAC+AGG - Chr1:11022718-11022737 MsG0180000777.01.T01:intron 30.0%
AGGTTGTGAGAAATTACATA+AGG + Chr1:11025692-11025711 None:intergenic 30.0%
ATAAAACAACTGACCTCTAT+TGG + Chr1:11024614-11024633 None:intergenic 30.0%
ATACAATATCCAATCAGGAT+CGG + Chr1:11023119-11023138 None:intergenic 30.0%
ATATGCTACTGTCATTAACT+TGG - Chr1:11024833-11024852 MsG0180000777.01.T01:intron 30.0%
ATCTATAAAACCAAAGCACA+GGG + Chr1:11021363-11021382 None:intergenic 30.0%
ATGAATATGGGAGAAGAATT+AGG + Chr1:11025410-11025429 None:intergenic 30.0%
ATGTTTATGGTACCTGTTTA+TGG + Chr1:11020235-11020254 None:intergenic 30.0%
ATTAAATTTCCCAAGTATGG+CGG + Chr1:11013662-11013681 None:intergenic 30.0%
ATTGATGTTAAAGATGGTCA+TGG - Chr1:11019389-11019408 MsG0180000777.01.T01:intron 30.0%
ATTGTGTTGAGTCGTAAAAT+CGG - Chr1:11014363-11014382 MsG0180000777.01.T01:intron 30.0%
ATTTCGTTTAAGAAATGGAG+AGG + Chr1:11025994-11026013 None:intergenic 30.0%
CCAAATTCTGTTTCAAATAC+AGG + Chr1:11024470-11024489 None:intergenic 30.0%
CGAAATAAAACAATAAAGGC+CGG + Chr1:11021811-11021830 None:intergenic 30.0%
CGCAGCAAAATTTAAAGATA+AGG + Chr1:11025577-11025596 None:intergenic 30.0%
CTAATAACTACTCTTCTTCT+TGG + Chr1:11017209-11017228 None:intergenic 30.0%
CTACATTGCATCCAAATTAT+AGG - Chr1:11017981-11018000 MsG0180000777.01.T01:intron 30.0%
CTACTACTGTGTCAATAATT+CGG + Chr1:11025136-11025155 None:intergenic 30.0%
CTGCAAAGTACAATAAAACA+CGG + Chr1:11015610-11015629 None:intergenic 30.0%
CTGTCAAAATCTGCAAATAA+TGG + Chr1:11023637-11023656 None:intergenic 30.0%
CTTAGTAATTAAAGCAAAGC+CGG - Chr1:11022915-11022934 MsG0180000777.01.T01:intron 30.0%
CTTCACATTAACTTCATAAC+GGG + Chr1:11023379-11023398 None:intergenic 30.0%
GAAAATAACAGAGAATGCAA+TGG + Chr1:11013685-11013704 None:intergenic 30.0%
GAAGAATTAGGATAATTTGG+AGG + Chr1:11025398-11025417 None:intergenic 30.0%
GAATGAAATGAAGTAAGTAG+TGG + Chr1:11018582-11018601 None:intergenic 30.0%
GACAAAGAAAAAGGAAGAAA+AGG + Chr1:11012999-11013018 None:intergenic 30.0%
GACATAAGTAATGAAGATGT+TGG - Chr1:11025155-11025174 MsG0180000777.01.T01:intron 30.0%
GCTGCAAGATTAGAATAATT+GGG + Chr1:11017416-11017435 None:intergenic 30.0%
GGAAACTTGTCTATGAATAT+GGG + Chr1:11025422-11025441 None:intergenic 30.0%
GGAGAAGAATTAGGATAATT+TGG + Chr1:11025401-11025420 None:intergenic 30.0%
GGTGAATATTAATAATGAGG+TGG - Chr1:11017127-11017146 MsG0180000777.01.T01:intron 30.0%
GTGTTAATATGCACATATCT+TGG - Chr1:11016738-11016757 MsG0180000777.01.T01:intron 30.0%
GTTATTCCTGACTTATGTTA+GGG - Chr1:11017306-11017325 MsG0180000777.01.T01:intron 30.0%
TAAGGTGTGTTTGATCAATT+AGG + Chr1:11014870-11014889 None:intergenic 30.0%
TAGAGAAATACTTCTATGGA+TGG - Chr1:11018110-11018129 MsG0180000777.01.T01:intron 30.0%
TAGCAAAATTAAAGCATGTG+GGG + Chr1:11025479-11025498 None:intergenic 30.0%
TATATACGTTATGGCAGTAA+GGG - Chr1:11025622-11025641 MsG0180000777.01.T01:intron 30.0%
TATTACATGGAAGGAAATAC+AGG - Chr1:11024440-11024459 MsG0180000777.01.T01:intron 30.0%
TCACTGAAGTACAAGTAAAT+GGG + Chr1:11021536-11021555 None:intergenic 30.0%
TCAGTCTCTTTAACGAATAA+TGG + Chr1:11021989-11022008 None:intergenic 30.0%
TCGATTTCAATTTCAATCGA+TGG + Chr1:11018691-11018710 None:intergenic 30.0%
TCTGATGCTTAAAAATTTGC+TGG - Chr1:11020056-11020075 MsG0180000777.01.T01:intron 30.0%
TCTGTGAATATTTAATGGCT+AGG - Chr1:11023318-11023337 MsG0180000777.01.T01:intron 30.0%
TCTGTTCTAATTGCTTCTAA+AGG - Chr1:11022239-11022258 MsG0180000777.01.T01:intron 30.0%
TCTTAAACGAAATAGAGAAC+TGG - Chr1:11026001-11026020 MsG0180000777.01.T01:five_prime_UTR 30.0%
TCTTCCATCTGTTATGATTT+AGG - Chr1:11015523-11015542 MsG0180000777.01.T01:intron 30.0%
TGAAATCTCAACAGTTAATG+AGG - Chr1:11016972-11016991 MsG0180000777.01.T01:CDS 30.0%
TGCTGCAAGATTAGAATAAT+TGG + Chr1:11017417-11017436 None:intergenic 30.0%
TGGAAACTTGTCTATGAATA+TGG + Chr1:11025423-11025442 None:intergenic 30.0%
TGGATTAAATTTCCCAAGTA+TGG + Chr1:11013665-11013684 None:intergenic 30.0%
TGTATTAACACTCAATCAAG+AGG + Chr1:11016297-11016316 None:intergenic 30.0%
TGTTATTCCTGACTTATGTT+AGG - Chr1:11017305-11017324 MsG0180000777.01.T01:intron 30.0%
TTAGATCACCTAATGTACAA+AGG + Chr1:11020357-11020376 None:intergenic 30.0%
TTATAGAAATACCCTCAGAA+GGG + Chr1:11018506-11018525 None:intergenic 30.0%
TTATATACGTTATGGCAGTA+AGG - Chr1:11025621-11025640 MsG0180000777.01.T01:intron 30.0%
TTATTTGCATGTGACGTTTA+TGG - Chr1:11018322-11018341 MsG0180000777.01.T01:CDS 30.0%
TTCACGTGCCTATATTAAAA+AGG + Chr1:11020332-11020351 None:intergenic 30.0%
TTGAACATTAGTGATGTTAG+TGG - Chr1:11021266-11021285 MsG0180000777.01.T01:intron 30.0%
TTGCTGTATTTCTTCCAAAA+GGG + Chr1:11025105-11025124 None:intergenic 30.0%
TTGCTTTACCCAATATGTAT+AGG - Chr1:11021184-11021203 MsG0180000777.01.T01:intron 30.0%
TTGGTATTGTTGCCATAATT+GGG - Chr1:11016340-11016359 MsG0180000777.01.T01:intron 30.0%
TTGTGTATTCAATTGTTTGC+AGG + Chr1:11023861-11023880 None:intergenic 30.0%
TTTATAGAAATACCCTCAGA+AGG + Chr1:11018507-11018526 None:intergenic 30.0%
TTTATGAAGGAAATCAAGGT+TGG - Chr1:11020693-11020712 MsG0180000777.01.T01:intron 30.0%
TTTATTGTACTTTGCAGTGT+CGG - Chr1:11015613-11015632 MsG0180000777.01.T01:intron 30.0%
TTTCCATCATGACAAAGAAA+GGG - Chr1:11023917-11023936 MsG0180000777.01.T01:intron 30.0%
TTTGTCTCAAAACTTCAGTT+TGG + Chr1:11020899-11020918 None:intergenic 30.0%
! AAAAGAGCTCGATAAGTTTT+TGG + Chr1:11022666-11022685 None:intergenic 30.0%
! AACTGATTTCATTAGGTGTA+GGG - Chr1:11019547-11019566 MsG0180000777.01.T01:intron 30.0%
! AAGTCTTTGCTATATCCTTA+AGG + Chr1:11025720-11025739 None:intergenic 30.0%
! AATAATGTTTGAAACCTCCT+AGG + Chr1:11025918-11025937 None:intergenic 30.0%
! AATACAGAGGTGTATATTGA+AGG - Chr1:11021833-11021852 MsG0180000777.01.T01:intron 30.0%
! ACCTATTCATTGTATGGTTT+TGG - Chr1:11023575-11023594 MsG0180000777.01.T01:intron 30.0%
! AGCAATACTGTATAACTTGT+GGG + Chr1:11022042-11022061 None:intergenic 30.0%
! AGGTAGCATTTTCATAAAAC+AGG + Chr1:11016277-11016296 None:intergenic 30.0%
! AGGTTTTACTTTCTCAAAGA+TGG + Chr1:11024031-11024050 None:intergenic 30.0%
! AGTCTTTGCTATATCCTTAA+GGG + Chr1:11025719-11025738 None:intergenic 30.0%
! ATAGTCTTGGTTTACTTTCT+TGG - Chr1:11019790-11019809 MsG0180000777.01.T01:intron 30.0%
! ATGCTGTTCTCTATTGTTTT+TGG - Chr1:11015904-11015923 MsG0180000777.01.T01:intron 30.0%
! CCTGTATTTGAAACAGAATT+TGG - Chr1:11024467-11024486 MsG0180000777.01.T01:intron 30.0%
! CGCTTTTACACTTACATATA+GGG - Chr1:11014083-11014102 MsG0180000777.01.T01:intron 30.0%
! CTTCCTTATTTATGTGAGAT+GGG + Chr1:11023537-11023556 None:intergenic 30.0%
! GAGATTTTTGCTAACTTCTT+AGG - Chr1:11019517-11019536 MsG0180000777.01.T01:intron 30.0%
! GTATCTAAGGTGTAAAAAAC+TGG - Chr1:11019723-11019742 MsG0180000777.01.T01:intron 30.0%
! GTATTTTCTCTTCCAAATAG+TGG - Chr1:11025520-11025539 MsG0180000777.01.T01:intron 30.0%
! TAGCACATGGTAAACTTTTA+TGG + Chr1:11014900-11014919 None:intergenic 30.0%
! TCTTCCTTATTTATGTGAGA+TGG + Chr1:11023538-11023557 None:intergenic 30.0%
! TGGTTGCATGTTTTCAAAAA+GGG - Chr1:11018969-11018988 MsG0180000777.01.T01:intron 30.0%
! TTCCTTATTTATGTGAGATG+GGG + Chr1:11023536-11023555 None:intergenic 30.0%
! TTGACTTTTAAACCATGTGA+AGG - Chr1:11016233-11016252 MsG0180000777.01.T01:intron 30.0%
! TTGGTTGCATGTTTTCAAAA+AGG - Chr1:11018968-11018987 MsG0180000777.01.T01:intron 30.0%
! TTTGCTGTATTTCTTCCAAA+AGG + Chr1:11025106-11025125 None:intergenic 30.0%
! TTTTACGCATAATTGGTAAG+CGG + Chr1:11015363-11015382 None:intergenic 30.0%
! TTTTCCATCATGACAAAGAA+AGG - Chr1:11023916-11023935 MsG0180000777.01.T01:intron 30.0%
!! AAAATTTGCTGGTATAGTGT+TGG - Chr1:11020067-11020086 MsG0180000777.01.T01:intron 30.0%
!! AAGTACAGTTTTATACACCA+TGG + Chr1:11017340-11017359 None:intergenic 30.0%
!! AGGGTGAGTTTATTTTCATA+CGG + Chr1:11016858-11016877 None:intergenic 30.0%
!! ATCACAAACACTGATTCAAA+TGG + Chr1:11019367-11019386 None:intergenic 30.0%
!! ATTTTGACAGAGATAATCAG+AGG - Chr1:11023647-11023666 MsG0180000777.01.T01:intron 30.0%
!! CATGGAAAGTTGTTTTCTAA+TGG - Chr1:11022471-11022490 MsG0180000777.01.T01:intron 30.0%
!! CCTGCTAATTTTAAAAGCAT+AGG + Chr1:11015421-11015440 None:intergenic 30.0%
!! GGTCAGTTGTTTTATATTGA+TGG - Chr1:11024619-11024638 MsG0180000777.01.T01:intron 30.0%
!! TCACCCTTTTGTTTCTTATT+TGG - Chr1:11016487-11016506 MsG0180000777.01.T01:intron 30.0%
!! TCGCTTTTACACTTACATAT+AGG - Chr1:11014082-11014101 MsG0180000777.01.T01:intron 30.0%
!! TCTCTTTTGGAAACCAATAA+TGG + Chr1:11023606-11023625 None:intergenic 30.0%
!! TCTGCAATTTTAGAGGATTA+GGG - Chr1:11013335-11013354 MsG0180000777.01.T01:intron 30.0%
!! TGGAAAGTTGTTTTCTAATG+GGG - Chr1:11022473-11022492 MsG0180000777.01.T01:intron 30.0%
!! TTAAGTTCTTGTGATTTGGT+TGG - Chr1:11019854-11019873 MsG0180000777.01.T01:intron 30.0%
!! TTCTGCAATTTTAGAGGATT+AGG - Chr1:11013334-11013353 MsG0180000777.01.T01:intron 30.0%
!!! AGGAAATTGGATTTTTCAAG+TGG - Chr1:11014706-11014725 MsG0180000777.01.T01:CDS 30.0%
!!! CCTATGCTTTTAAAATTAGC+AGG - Chr1:11015418-11015437 MsG0180000777.01.T01:intron 30.0%
!!! CTTGTCTTCTGTTTTGATTT+TGG - Chr1:11013709-11013728 MsG0180000777.01.T01:CDS 30.0%
!!! GTTCTTTTTGATTTTGGTCT+AGG - Chr1:11018853-11018872 MsG0180000777.01.T01:intron 30.0%
!!! TAGATGAGGTGAGAATTTTT+TGG + Chr1:11014989-11015008 None:intergenic 30.0%
!!! TGTTAAACTTTTGGCTTGAA+TGG - Chr1:11024536-11024555 MsG0180000777.01.T01:intron 30.0%
!!! TGTTTTTTATGATCTTGTGC+TGG - Chr1:11019072-11019091 MsG0180000777.01.T01:intron 30.0%
!!! TTCTGTGATTTTGATTGTGT+AGG - Chr1:11020563-11020582 MsG0180000777.01.T01:intron 30.0%
AAAAAAAAAAGGATGAGGCG+AGG + Chr1:11016428-11016447 None:intergenic 35.0%
AAAATGTCCCATTATCTCAC+CGG + Chr1:11025454-11025473 None:intergenic 35.0%
AAACAATTCACTCATGCACA+TGG + Chr1:11022783-11022802 None:intergenic 35.0%
AAAGAAGAGTTACAAGGATC+GGG - Chr1:11014605-11014624 MsG0180000777.01.T01:intron 35.0%
AAAGGAACCAGAATTAGAAG+CGG + Chr1:11012981-11013000 None:intergenic 35.0%
AAATAAGTGGGACGAAGAAT+GGG - Chr1:11017179-11017198 MsG0180000777.01.T01:intron 35.0%
AACGAAACAACTCTGATAGT+TGG + Chr1:11018608-11018627 None:intergenic 35.0%
AATATGAATTGGTACGTGGT+AGG - Chr1:11022196-11022215 MsG0180000777.01.T01:intron 35.0%
AATATGCTTCACTACAGGTA+TGG - Chr1:11025270-11025289 MsG0180000777.01.T01:intron 35.0%
AATCGAATTGTGTCTTCACA+TGG + Chr1:11015764-11015783 None:intergenic 35.0%
AATCTGAAAAGATCCGAACA+AGG + Chr1:11013144-11013163 None:intergenic 35.0%
ACAAACTTGTGATGAAGACA+AGG - Chr1:11020772-11020791 MsG0180000777.01.T01:intron 35.0%
ACACTTTATCGACCAAGAAA+AGG - Chr1:11024005-11024024 MsG0180000777.01.T01:intron 35.0%
ACATATCGGAAAATATGCAC+AGG - Chr1:11021555-11021574 MsG0180000777.01.T01:intron 35.0%
ACCAAATTGTTGTGCATACT+CGG + Chr1:11025770-11025789 None:intergenic 35.0%
ACTCTCCTTTGTGATTTGAT+TGG - Chr1:11018249-11018268 MsG0180000777.01.T01:intron 35.0%
ACTGACATCGCTATATATGA+TGG + Chr1:11015398-11015417 None:intergenic 35.0%
AGAGACCAATCAAATCACAA+AGG + Chr1:11018257-11018276 None:intergenic 35.0%
AGATGGTCATGGATATCATT+TGG - Chr1:11019400-11019419 MsG0180000777.01.T01:intron 35.0%
AGGAAAATATGGAAGGAGAA+AGG + Chr1:11015124-11015143 None:intergenic 35.0%
AGGGTTTCAAACCTTTGAAT+TGG - Chr1:11013264-11013283 MsG0180000777.01.T01:CDS 35.0%
ATAAAACCAAAGTGGTCCAA+TGG + Chr1:11020009-11020028 None:intergenic 35.0%
ATAACCCGTCTTACTCTAAT+GGG - Chr1:11014635-11014654 MsG0180000777.01.T01:CDS 35.0%
ATATACGTTATGGCAGTAAG+GGG - Chr1:11025623-11025642 MsG0180000777.01.T01:intron 35.0%
ATATCAATTTCCAAACCCAC+AGG - Chr1:11017052-11017071 MsG0180000777.01.T01:intron 35.0%
ATATTTGCACTATCTAGCTG+TGG + Chr1:11022548-11022567 None:intergenic 35.0%
ATCTGAATATGCTTCACTAC+AGG - Chr1:11025265-11025284 MsG0180000777.01.T01:intron 35.0%
ATGAACAACATGTTGCTCTT+TGG - Chr1:11021385-11021404 MsG0180000777.01.T01:intron 35.0%
ATGCATTTATGCTGTTCTTG+GGG - Chr1:11021430-11021449 MsG0180000777.01.T01:intron 35.0%
ATGTCGTAGGAAAATATGGA+AGG + Chr1:11015131-11015150 None:intergenic 35.0%
ATGTCTCTCAACAAATCACA+AGG - Chr1:11021697-11021716 MsG0180000777.01.T01:intron 35.0%
ATGTTGCACATATGTGAAGA+GGG - Chr1:11022502-11022521 MsG0180000777.01.T01:intron 35.0%
ATTCATATGGCATAATCGTG+CGG - Chr1:11017093-11017112 MsG0180000777.01.T01:intron 35.0%
ATTTATGTGAGATGGGGAAA+GGG + Chr1:11023530-11023549 None:intergenic 35.0%
ATTTGTAGTCTATGAGCCAT+TGG - Chr1:11019990-11020009 MsG0180000777.01.T01:intron 35.0%
CAAAGACCAAAACATCAGAT+CGG + Chr1:11025043-11025062 None:intergenic 35.0%
CACTTATTTCATCAGCTCAT+GGG + Chr1:11017168-11017187 None:intergenic 35.0%
CAGCAATACTGTATAACTTG+TGG + Chr1:11022043-11022062 None:intergenic 35.0%
CATATTAGCACTCAATCAAG+AGG + Chr1:11015813-11015832 None:intergenic 35.0%
CATCTATAAAACCAAAGCAC+AGG + Chr1:11021364-11021383 None:intergenic 35.0%
CATGAGCTGATGAAATAAGT+GGG - Chr1:11017167-11017186 MsG0180000777.01.T01:intron 35.0%
CCAAGAACCTATTCATTGTA+TGG - Chr1:11023569-11023588 MsG0180000777.01.T01:intron 35.0%
CCACGTACCAATTCATATTA+AGG + Chr1:11022195-11022214 None:intergenic 35.0%
CCATACAATGAATAGGTTCT+TGG + Chr1:11023572-11023591 None:intergenic 35.0%
CCTGTTTATGGTACCTTATT+AGG + Chr1:11020223-11020242 None:intergenic 35.0%
CCTTAATATGAATTGGTACG+TGG - Chr1:11022192-11022211 MsG0180000777.01.T01:intron 35.0%
CGTGAATTCCTTTGTACATT+AGG - Chr1:11020346-11020365 MsG0180000777.01.T01:intron 35.0%
CTCCTAGGCCAAAATTAAAA+AGG + Chr1:11025903-11025922 None:intergenic 35.0%
CTTCCAATCCTTATAGGAAT+CGG + Chr1:11015027-11015046 None:intergenic 35.0%
CTTGGTATTGTTGCCATAAT+TGG - Chr1:11016339-11016358 MsG0180000777.01.T01:intron 35.0%
CTTGTACTTCAGTGACATAT+CGG - Chr1:11021541-11021560 MsG0180000777.01.T01:intron 35.0%
CTTTCTACTTCCACTTCTAA+TGG - Chr1:11024332-11024351 MsG0180000777.01.T01:intron 35.0%
CTTTGCACTGAAGTATAACA+TGG - Chr1:11024188-11024207 MsG0180000777.01.T01:intron 35.0%
GAAAGAAGAGTTACAAGGAT+CGG - Chr1:11014604-11014623 MsG0180000777.01.T01:intron 35.0%
GAACCTTAGTGATGACTTTA+AGG + Chr1:11018212-11018231 None:intergenic 35.0%
GAATAGCAAAGAATAGCACA+TGG + Chr1:11014913-11014932 None:intergenic 35.0%
GAATCTGTTGAAGCCTAATA+AGG - Chr1:11020305-11020324 MsG0180000777.01.T01:intron 35.0%
GAATGCATTTATGCTGTTCT+TGG - Chr1:11021428-11021447 MsG0180000777.01.T01:intron 35.0%
GAGGGCTTGTAAAAAAATGA+AGG - Chr1:11014773-11014792 MsG0180000777.01.T01:CDS 35.0%
GCAATATAATTGGGATACAC+AGG - Chr1:11024292-11024311 MsG0180000777.01.T01:intron 35.0%
GGAAATGTCGTAGGAAAATA+TGG + Chr1:11015135-11015154 None:intergenic 35.0%
GGAAATTGTCAACATGCAAT+CGG + Chr1:11018929-11018948 None:intergenic 35.0%
GGAATCACGGCAATATAATT+GGG - Chr1:11024283-11024302 MsG0180000777.01.T01:intron 35.0%
GGATGAATTAGGTGAAAAAC+TGG - Chr1:11014197-11014216 MsG0180000777.01.T01:intron 35.0%
GGGTTTCAAACCTTTGAATT+GGG - Chr1:11013265-11013284 MsG0180000777.01.T01:CDS 35.0%
GGTTTCAAACCTTTGAATTG+GGG - Chr1:11013266-11013285 MsG0180000777.01.T01:CDS 35.0%
GTAAAAGCGAGCAGAAAAAA+AGG + Chr1:11014072-11014091 None:intergenic 35.0%
GTATAGTAGGTGGATGAATT+AGG - Chr1:11014186-11014205 MsG0180000777.01.T01:intron 35.0%
GTCACTGAAGTACAAGTAAA+TGG + Chr1:11021537-11021556 None:intergenic 35.0%
GTGCTAATATGCACATAAGT+TGG - Chr1:11015822-11015841 MsG0180000777.01.T01:intron 35.0%
GTTCTTTCTCATCTACTTGA+TGG + Chr1:11022896-11022915 None:intergenic 35.0%
GTTGATCTATTAGACACACA+AGG + Chr1:11014938-11014957 None:intergenic 35.0%
TAAAAATGGCCCCAATTCAA+AGG + Chr1:11013278-11013297 None:intergenic 35.0%
TAAAAGAGAACAATCCTACC+AGG - Chr1:11018148-11018167 MsG0180000777.01.T01:intron 35.0%
TAAGAGCCCTCTTCAATAAA+GGG + Chr1:11020719-11020738 None:intergenic 35.0%
TACATATTGGGTAAAGCAAC+AGG + Chr1:11021183-11021202 None:intergenic 35.0%
TAGACTTCTGATGCAGAATT+TGG - Chr1:11019748-11019767 MsG0180000777.01.T01:intron 35.0%
TAGTACGAAGGGAGAAAATT+AGG + Chr1:11021586-11021605 None:intergenic 35.0%
TATAAGCCCATTTCTTGAGA+GGG - Chr1:11024215-11024234 MsG0180000777.01.T01:intron 35.0%
TATAATTGGGATACACAGGA+AGG - Chr1:11024296-11024315 MsG0180000777.01.T01:intron 35.0%
TATGTTGCACATATGTGAAG+AGG - Chr1:11022501-11022520 MsG0180000777.01.T01:intron 35.0%
TATTTATGTGAGATGGGGAA+AGG + Chr1:11023531-11023550 None:intergenic 35.0%
TCATAGTAGAAACTTGGTAC+CGG + Chr1:11022937-11022956 None:intergenic 35.0%
TCATATCCCTCTCAAGAAAT+GGG + Chr1:11024224-11024243 None:intergenic 35.0%
TGAAGCAAGTACTTCAAAGA+CGG + Chr1:11024733-11024752 None:intergenic 35.0%
TGATAACTATCCAAGCATAC+CGG - Chr1:11021481-11021500 MsG0180000777.01.T01:intron 35.0%
TGCAAAGATTGAAAATGTGG+AGG - Chr1:11020381-11020400 MsG0180000777.01.T01:intron 35.0%
TGCAAGTGAATGAATAGATG+AGG + Chr1:11015003-11015022 None:intergenic 35.0%
TGCATTTCTTCATTGTGTAC+TGG - Chr1:11020409-11020428 MsG0180000777.01.T01:intron 35.0%
TGCTTGGATAGTTATCACTT+AGG + Chr1:11021478-11021497 None:intergenic 35.0%
TGGGATAAATTTCCCAAGTA+TGG + Chr1:11016772-11016791 None:intergenic 35.0%
TTATAAGCCCATTTCTTGAG+AGG - Chr1:11024214-11024233 MsG0180000777.01.T01:intron 35.0%
TTCACGATTTATGTTGCAGA+TGG - Chr1:11021955-11021974 MsG0180000777.01.T01:intron 35.0%
TTCATATCCCTCTCAAGAAA+TGG + Chr1:11024225-11024244 None:intergenic 35.0%
TTCCATCATGACAAAGAAAG+GGG - Chr1:11023918-11023937 MsG0180000777.01.T01:intron 35.0%
TTCCCCATCTCACATAAATA+AGG - Chr1:11023531-11023550 MsG0180000777.01.T01:intron 35.0%
TTGAATCAGCATAGCTGATA+AGG + Chr1:11020463-11020482 None:intergenic 35.0%
TTGACTCTTCCAATCCTTAT+AGG + Chr1:11015033-11015052 None:intergenic 35.0%
TTGATTGTGTAGGTATGAAG+AGG - Chr1:11020573-11020592 MsG0180000777.01.T01:intron 35.0%
TTGCATGATGCAAGGATTAA+GGG + Chr1:11018062-11018081 None:intergenic 35.0%
TTGGTATTGTTGCCATACTT+GGG - Chr1:11016757-11016776 MsG0180000777.01.T01:intron 35.0%
TTGTTTGACATGTATCGTAC+AGG + Chr1:11014026-11014045 None:intergenic 35.0%
TTTCTATCATTGCCAATAGC+AGG - Chr1:11018361-11018380 MsG0180000777.01.T01:intron 35.0%
TTTCTTGCTCATCAAGCATA+AGG - Chr1:11019095-11019114 MsG0180000777.01.T01:intron 35.0%
TTTGCATGATGCAAGGATTA+AGG + Chr1:11018063-11018082 None:intergenic 35.0%
! AACTTATCGAGCTCTTTTAG+AGG - Chr1:11022668-11022687 MsG0180000777.01.T01:intron 35.0%
! AAGGTATTCTCTTCCTTGTT+CGG - Chr1:11013128-11013147 MsG0180000777.01.T01:CDS 35.0%
! ACAAACTTCAAGTTTGTGGA+TGG + Chr1:11022124-11022143 None:intergenic 35.0%
! ATTTGAAGTGGAAATGTCGT+AGG + Chr1:11015144-11015163 None:intergenic 35.0%
! CAATAACCGATCTGATGTTT+TGG - Chr1:11025034-11025053 MsG0180000777.01.T01:CDS 35.0%
! CACTGAGAGTACATATTACA+TGG - Chr1:11024427-11024446 MsG0180000777.01.T01:intron 35.0%
! CCTAATAAGGTACCATAAAC+AGG - Chr1:11020220-11020239 MsG0180000777.01.T01:intron 35.0%
! GAACTGATTTCATTAGGTGT+AGG - Chr1:11019546-11019565 MsG0180000777.01.T01:intron 35.0%
! GAATTTTGGATGATGCCATT+TGG - Chr1:11024090-11024109 MsG0180000777.01.T01:intron 35.0%
! GAGAGTACATATTACATGGA+AGG - Chr1:11024431-11024450 MsG0180000777.01.T01:intron 35.0%
! GTTCGGATCTTTTCAGATTT+GGG - Chr1:11013145-11013164 MsG0180000777.01.T01:CDS 35.0%
! TAACTTTTCGGTATAGTAGG+TGG - Chr1:11014176-11014195 MsG0180000777.01.T01:intron 35.0%
! TGTTCGGATCTTTTCAGATT+TGG - Chr1:11013144-11013163 MsG0180000777.01.T01:CDS 35.0%
! TTAAATGTTTTTCACCTGCC+CGG - Chr1:11021636-11021655 MsG0180000777.01.T01:intron 35.0%
! TTATTTTCATACGGCTGAAG+AGG + Chr1:11016849-11016868 None:intergenic 35.0%
! TTGCTTGCTAAGCAGAAAAA+AGG - Chr1:11016100-11016119 MsG0180000777.01.T01:intron 35.0%
!! CTGCAATTTTAGAGGATTAG+GGG - Chr1:11013336-11013355 MsG0180000777.01.T01:intron 35.0%
!! GTAGATAGACTGGTCATTTT+TGG + Chr1:11018439-11018458 None:intergenic 35.0%
!! GTCATGTGAAGTATTTTCCA+GGG - Chr1:11023261-11023280 MsG0180000777.01.T01:intron 35.0%
!! GTGGTGTTATGTTGTTAGTT+TGG - Chr1:11023431-11023450 MsG0180000777.01.T01:intron 35.0%
!! GTGTTGTTCGTTTTATTGCA+AGG - Chr1:11018649-11018668 MsG0180000777.01.T01:intron 35.0%
!! TGTCATGTGAAGTATTTTCC+AGG - Chr1:11023260-11023279 MsG0180000777.01.T01:intron 35.0%
!! TGTGATTTGTTGAGAGACAT+GGG + Chr1:11021697-11021716 None:intergenic 35.0%
!! TTGTGATTTGTTGAGAGACA+TGG + Chr1:11021698-11021717 None:intergenic 35.0%
!!! AACTTTTTTCGCTGTGTTCA+AGG - Chr1:11013109-11013128 MsG0180000777.01.T01:CDS 35.0%
!!! ACTTTTTTAATGCACTCAGC+AGG - Chr1:11017494-11017513 MsG0180000777.01.T01:intron 35.0%
!!! AGGAATTTTTGGCAATTTGG+GGG - Chr1:11021887-11021906 MsG0180000777.01.T01:intron 35.0%
!!! AGGATGATCAGATGCTTTTT+TGG - Chr1:11018873-11018892 MsG0180000777.01.T01:intron 35.0%
!!! CAGGAATTTTTGGCAATTTG+GGG - Chr1:11021886-11021905 MsG0180000777.01.T01:intron 35.0%
!!! CATTATCGTTGGGTTTTGTT+TGG - Chr1:11018805-11018824 MsG0180000777.01.T01:intron 35.0%
!!! CCAGGAATTTTTGGCAATTT+GGG - Chr1:11021885-11021904 MsG0180000777.01.T01:intron 35.0%
!!! CGATAAGTTTTTGGTTTCTG+AGG + Chr1:11022657-11022676 None:intergenic 35.0%
!!! CTGTTTTGATTTTGGCTGTT+TGG - Chr1:11013717-11013736 MsG0180000777.01.T01:CDS 35.0%
!!! CTTTTTAATTTTGGCCTAGG+AGG - Chr1:11025901-11025920 MsG0180000777.01.T01:intron 35.0%
!!! GACCTTTTTAATTTTGGCCT+AGG - Chr1:11025898-11025917 MsG0180000777.01.T01:intron 35.0%
!!! GGTTTTGGTTGAACCATTAT+TGG - Chr1:11023590-11023609 MsG0180000777.01.T01:intron 35.0%
!!! TGAGGTGAGAATTTTTTGGA+AGG + Chr1:11014985-11015004 None:intergenic 35.0%
!!! TTTTAAAATTAGCAGGGTCC+AGG - Chr1:11015425-11015444 MsG0180000777.01.T01:intron 35.0%
AAAACGAACAACACGTTCTC+TGG + Chr1:11018643-11018662 None:intergenic 40.0%
AAAGAATGAAGAGCGAGCTT+TGG - Chr1:11014805-11014824 MsG0180000777.01.T01:CDS 40.0%
AAAGCATAGGGTTTGGCATA+AGG + Chr1:11022756-11022775 None:intergenic 40.0%
AAATGTCCCATTATCTCACC+GGG + Chr1:11025453-11025472 None:intergenic 40.0%
AACAGAATAACTCGTGACGA+TGG - Chr1:11014517-11014536 MsG0180000777.01.T01:intron 40.0%
AAGAATGAAGAGCGAGCTTT+GGG - Chr1:11014806-11014825 MsG0180000777.01.T01:CDS 40.0%
AAGCATAGGGTTTGGCATAA+GGG + Chr1:11022755-11022774 None:intergenic 40.0%
AATCGTACTCATGATCGTTG+AGG + Chr1:11014410-11014429 None:intergenic 40.0%
AATTTGCAGAACCTGTTGAC+GGG - Chr1:11024142-11024161 MsG0180000777.01.T01:intron 40.0%
ACAAGTTTCCAGTTGAATCC+CGG - Chr1:11025432-11025451 MsG0180000777.01.T01:intron 40.0%
ACGAGTTATTCTGTTACGAC+TGG + Chr1:11014512-11014531 None:intergenic 40.0%
ACGGTCTATTCCATTAGAAG+TGG + Chr1:11024345-11024364 None:intergenic 40.0%
AGAGGAAAAAAGCCAGTATG+AGG - Chr1:11022686-11022705 MsG0180000777.01.T01:intron 40.0%
AGCACTCAGCCTATACATAT+TGG + Chr1:11021196-11021215 None:intergenic 40.0%
AGCATAAGGTTGTGTGATTG+TGG - Chr1:11019109-11019128 MsG0180000777.01.T01:intron 40.0%
AGCATTCCCTAACATAAGTC+AGG + Chr1:11017315-11017334 None:intergenic 40.0%
AGCTGCTAATCAAGAAGTAG+AGG + Chr1:11021036-11021055 None:intergenic 40.0%
AGGTCAAAAGCTCTTAAACC+TGG + Chr1:11018169-11018188 None:intergenic 40.0%
AGTGCCAATTTGAACAACAC+AGG + Chr1:11013886-11013905 None:intergenic 40.0%
ATAAAACACGGACTCTGACA+CGG + Chr1:11015598-11015617 None:intergenic 40.0%
ATCGTACTCATGATCGTTGA+GGG + Chr1:11014409-11014428 None:intergenic 40.0%
CAAAAGCTCTTAAACCTGGT+AGG + Chr1:11018165-11018184 None:intergenic 40.0%
CACAACCATGTAACAAGAGT+CGG - Chr1:11024398-11024417 MsG0180000777.01.T01:intron 40.0%
CATACAGCTGAAGAACATAG+AGG + Chr1:11023179-11023198 None:intergenic 40.0%
CATGACAAAGAAAGGGGAAA+AGG - Chr1:11023924-11023943 MsG0180000777.01.T01:intron 40.0%
CATTGGAACTGGTATAGTCT+TGG - Chr1:11019777-11019796 MsG0180000777.01.T01:intron 40.0%
CCAATTTGAACAACACAGGA+GGG + Chr1:11013882-11013901 None:intergenic 40.0%
CCACTTATTTCATCAGCTCA+TGG + Chr1:11017169-11017188 None:intergenic 40.0%
CCATGAGCTGATGAAATAAG+TGG - Chr1:11017166-11017185 MsG0180000777.01.T01:intron 40.0%
CCCAAATTGCCAAAAATTCC+TGG + Chr1:11021888-11021907 None:intergenic 40.0%
CTACTGTATGCTTCGAGATT+AGG - Chr1:11017720-11017739 MsG0180000777.01.T01:intron 40.0%
CTGGTAGAGTTTGTATACTG+TGG - Chr1:11025066-11025085 MsG0180000777.01.T01:CDS 40.0%
CTTGGTATTGTTGCCATACT+TGG - Chr1:11016756-11016775 MsG0180000777.01.T01:intron 40.0%
GAAAGAATTGCGTCTTCACA+TGG + Chr1:11016681-11016700 None:intergenic 40.0%
GAAAGGATCGCATGCAATTA+TGG + Chr1:11015107-11015126 None:intergenic 40.0%
GAAATAAGTGGGACGAAGAA+TGG - Chr1:11017178-11017197 MsG0180000777.01.T01:intron 40.0%
GAAGTTAGCAAAAATCTCCC+TGG + Chr1:11019515-11019534 None:intergenic 40.0%
GAATTTGCAGAACCTGTTGA+CGG - Chr1:11024141-11024160 MsG0180000777.01.T01:intron 40.0%
GACTATACCAGTTCCAATGT+TGG + Chr1:11019776-11019795 None:intergenic 40.0%
GAGGATTAGAGAAACTGTTG+AGG - Chr1:11020592-11020611 MsG0180000777.01.T01:intron 40.0%
GAGTATGCACAACAATTTGG+TGG - Chr1:11025769-11025788 MsG0180000777.01.T01:intron 40.0%
GATAACCCGTCTTACTCTAA+TGG - Chr1:11014634-11014653 MsG0180000777.01.T01:CDS 40.0%
GCACTCAGCCTATACATATT+GGG + Chr1:11021195-11021214 None:intergenic 40.0%
GCATAAGGTTGTGTGATTGT+GGG - Chr1:11019110-11019129 MsG0180000777.01.T01:intron 40.0%
GCTATATCCTTAAGGGACAT+AGG + Chr1:11025712-11025731 None:intergenic 40.0%
GCTGCTAATCAAGAAGTAGA+GGG + Chr1:11021035-11021054 None:intergenic 40.0%
GGATCTTTCAGAGAAAGCAA+AGG - Chr1:11025651-11025670 MsG0180000777.01.T01:intron 40.0%
GGGAATCACGGCAATATAAT+TGG - Chr1:11024282-11024301 MsG0180000777.01.T01:intron 40.0%
GGTACCAAGTTTCTACTATG+AGG - Chr1:11022936-11022955 MsG0180000777.01.T01:intron 40.0%
GGTGTGTTTGATCAATTAGG+AGG + Chr1:11014867-11014886 None:intergenic 40.0%
GGTTAACATGCACTCTTGTT+TGG - Chr1:11013628-11013647 MsG0180000777.01.T01:intron 40.0%
GTAAGAGCCCTCTTCAATAA+AGG + Chr1:11020720-11020739 None:intergenic 40.0%
GTGTGTGCCTTTGAATATCA+AGG + Chr1:11022167-11022186 None:intergenic 40.0%
TAACTATGAAGCACAGACTC+CGG + Chr1:11015673-11015692 None:intergenic 40.0%
TAACTCATCTCCAACCATAG+AGG + Chr1:11014543-11014562 None:intergenic 40.0%
TAGAGTTTGTATACTGTGGC+AGG - Chr1:11025070-11025089 MsG0180000777.01.T01:CDS 40.0%
TATCGGAAAATATGCACAGG+TGG - Chr1:11021558-11021577 MsG0180000777.01.T01:intron 40.0%
TCAAGAAGTAGAGGGAACAA+AGG + Chr1:11021027-11021046 None:intergenic 40.0%
TCCGAGTATGCACAACAATT+TGG - Chr1:11025766-11025785 MsG0180000777.01.T01:intron 40.0%
TCCTTGCATCATGCAAACAA+AGG - Chr1:11018066-11018085 MsG0180000777.01.T01:intron 40.0%
TCGCATGCAATTATGGAAGA+CGG + Chr1:11015100-11015119 None:intergenic 40.0%
TCTCGTGTAGAGAAACCAAA+TGG + Chr1:11024108-11024127 None:intergenic 40.0%
TGCATGATGCAAGGATTAAG+GGG + Chr1:11018061-11018080 None:intergenic 40.0%
TGGGCTGAATTTCCCAATTA+TGG + Chr1:11016355-11016374 None:intergenic 40.0%
TTCCAGCTATGTGTTCAATG+TGG - Chr1:11021862-11021881 MsG0180000777.01.T01:intron 40.0%
TTCCCCTTTCTTTGTCATGA+TGG + Chr1:11023923-11023942 None:intergenic 40.0%
TTCTGCCCATTAGAGTAAGA+CGG + Chr1:11014643-11014662 None:intergenic 40.0%
TTGAACATCATATCCTACGC+CGG - Chr1:11021789-11021808 MsG0180000777.01.T01:intron 40.0%
TTGAATCCCGGTGAGATAAT+GGG - Chr1:11025444-11025463 MsG0180000777.01.T01:intron 40.0%
TTGCATGTGACGTTTATGGT+GGG - Chr1:11018326-11018345 MsG0180000777.01.T01:CDS 40.0%
TTGTGGATGGTTTACCTCTA+TGG + Chr1:11022111-11022130 None:intergenic 40.0%
TTGTGTAGACTGCCACTATT+TGG + Chr1:11025535-11025554 None:intergenic 40.0%
TTTGCATGTGACGTTTATGG+TGG - Chr1:11018325-11018344 MsG0180000777.01.T01:CDS 40.0%
! ACTTGCAACCGATTCCTATA+AGG - Chr1:11015016-11015035 MsG0180000777.01.T01:intron 40.0%
! ATGACCCTTTTCAGAGGTTA+GGG - Chr1:11014574-11014593 MsG0180000777.01.T01:intron 40.0%
! ATGGGCTTAGATAAAAGCAC+AGG + Chr1:11021518-11021537 None:intergenic 40.0%
! CAACCGATTCCTATAAGGAT+TGG - Chr1:11015021-11015040 MsG0180000777.01.T01:intron 40.0%
! CATCTGAGACACCATTAAAG+GGG + Chr1:11021915-11021934 None:intergenic 40.0%
! CTAACCCTAACCTCTGAAAA+GGG + Chr1:11014581-11014600 None:intergenic 40.0%
! GAATGACATTGGCTGAAGTA+TGG + Chr1:11015871-11015890 None:intergenic 40.0%
! GCACATGGACTAAAAGCATA+GGG + Chr1:11022768-11022787 None:intergenic 40.0%
! GCAGAATTTGGAACCAACAT+TGG - Chr1:11019760-11019779 MsG0180000777.01.T01:intron 40.0%
! GCATCTGAGACACCATTAAA+GGG + Chr1:11021916-11021935 None:intergenic 40.0%
! GGTGAGTCACTTTCTGTATA+AGG + Chr1:11014964-11014983 None:intergenic 40.0%
! GGTTGCAGGTTTGAGATAAT+TGG - Chr1:11019283-11019302 MsG0180000777.01.T01:intron 40.0%
! GTCATTAACTTGGTGGCATT+TGG - Chr1:11024843-11024862 MsG0180000777.01.T01:intron 40.0%
! TATGCACAACAATTTGGTGG+AGG - Chr1:11025772-11025791 MsG0180000777.01.T01:intron 40.0%
! TCAATGTGGCCAGGAATTTT+TGG - Chr1:11021876-11021895 MsG0180000777.01.T01:intron 40.0%
! TCCTTTGTTTGCATGATGCA+AGG + Chr1:11018070-11018089 None:intergenic 40.0%
! TCTAACCCTAACCTCTGAAA+AGG + Chr1:11014582-11014601 None:intergenic 40.0%
! TCTCAAAGATGGCCTTTTCT+TGG + Chr1:11024020-11024039 None:intergenic 40.0%
! TGCACATGGACTAAAAGCAT+AGG + Chr1:11022769-11022788 None:intergenic 40.0%
! TGCTACTGTCATTAACTTGG+TGG - Chr1:11024836-11024855 MsG0180000777.01.T01:intron 40.0%
! TGGACTAAAAGCATAGGGTT+TGG + Chr1:11022763-11022782 None:intergenic 40.0%
! TGGGCTTAGATAAAAGCACA+GGG + Chr1:11021517-11021536 None:intergenic 40.0%
! TGTGATCTGATTGGTGACTT+TGG - Chr1:11020159-11020178 MsG0180000777.01.T01:intron 40.0%
! TTTGGAACCAACATTGGAAC+TGG - Chr1:11019766-11019785 MsG0180000777.01.T01:intron 40.0%
!! GGAACATTCAGCTCTAAGTA+TGG - Chr1:11025793-11025812 MsG0180000777.01.T01:intron 40.0%
!! GGGTTTTTCGATTGTTGTCT+AGG - Chr1:11018989-11019008 MsG0180000777.01.T01:intron 40.0%
!! GTTTGGGAGTTTTGATGAGA+GGG - Chr1:11014755-11014774 MsG0180000777.01.T01:CDS 40.0%
!! TCAGCTCTAAGTATGGAGAA+TGG - Chr1:11025800-11025819 MsG0180000777.01.T01:intron 40.0%
!! TGTTTGGGAGTTTTGATGAG+AGG - Chr1:11014754-11014773 MsG0180000777.01.T01:CDS 40.0%
!!! AAGTTTTTGGTTTCTGAGGC+AGG + Chr1:11022653-11022672 None:intergenic 40.0%
!!! CGATCTGATGTTTTGGTCTT+TGG - Chr1:11025041-11025060 MsG0180000777.01.T01:CDS 40.0%
!!! GATGTTTTGGTCTTTGGTTC+TGG - Chr1:11025047-11025066 MsG0180000777.01.T01:CDS 40.0%
!!! GCCAGGAATTTTTGGCAATT+TGG - Chr1:11021884-11021903 MsG0180000777.01.T01:intron 40.0%
!!! GTTGGGTTTTGTTTGGTCTT+TGG - Chr1:11018812-11018831 MsG0180000777.01.T01:intron 40.0%
AAAACAATAAAGGCCGGCGT+AGG + Chr1:11021805-11021824 None:intergenic 45.0%
AACAACATAACACCACGGAG+AGG + Chr1:11023427-11023446 None:intergenic 45.0%
AATAGCGAAGAACGAACGAG+CGG + Chr1:11013021-11013040 None:intergenic 45.0%
AATGGCACGAGTTCACATCT+TGG - Chr1:11025818-11025837 MsG0180000777.01.T01:five_prime_UTR 45.0%
ACAGGGCAAGAATAGTACGA+AGG + Chr1:11021598-11021617 None:intergenic 45.0%
ACTCAAAGCTCCATTTAGCG+AGG + Chr1:11021238-11021257 None:intergenic 45.0%
AGCATAGGGTTTGGCATAAG+GGG + Chr1:11022754-11022773 None:intergenic 45.0%
AGGCTGAATAGGTGACTGTA+AGG + Chr1:11025360-11025379 None:intergenic 45.0%
AGGTGTAGGGCTCATAGATA+TGG - Chr1:11019560-11019579 MsG0180000777.01.T01:intron 45.0%
AGTATACCATCGTCCAACCA+AGG + Chr1:11017702-11017721 None:intergenic 45.0%
AGTCTCCGACTCTTGTTACA+TGG + Chr1:11024406-11024425 None:intergenic 45.0%
ATATGGCATAATCGTGCGGA+AGG - Chr1:11017097-11017116 MsG0180000777.01.T01:intron 45.0%
ATGGCACGAGTTCACATCTT+GGG - Chr1:11025819-11025838 MsG0180000777.01.T01:five_prime_UTR 45.0%
ATGTTAGGGAATGCTCTCCA+TGG - Chr1:11017320-11017339 MsG0180000777.01.T01:intron 45.0%
ATTATGGAAGACGGGGAAAG+AGG + Chr1:11015091-11015110 None:intergenic 45.0%
ATTTGCAGAACCTGTTGACG+GGG - Chr1:11024143-11024162 MsG0180000777.01.T01:intron 45.0%
ATTTGGGGGTTCCCCTTTAA+TGG - Chr1:11021901-11021920 MsG0180000777.01.T01:intron 45.0%
CAATGAGCGCTCATAGTAGT+AGG - Chr1:11017471-11017490 MsG0180000777.01.T01:intron 45.0%
CAGGGCAAGAATAGTACGAA+GGG + Chr1:11021597-11021616 None:intergenic 45.0%
CATTGCTTCAGTACCAACAG+TGG + Chr1:11024588-11024607 None:intergenic 45.0%
CCAGTATGAGGCAAGACTAA+AGG - Chr1:11022698-11022717 MsG0180000777.01.T01:intron 45.0%
CCGGTTGAAGCAATGCTTAT+CGG - Chr1:11021655-11021674 MsG0180000777.01.T01:intron 45.0%
CGCATGCAATTATGGAAGAC+GGG + Chr1:11015099-11015118 None:intergenic 45.0%
CTCACAACCTATGTCCCTTA+AGG - Chr1:11025702-11025721 MsG0180000777.01.T01:intron 45.0%
CTTGAGAGGGATATGAACCA+CGG - Chr1:11024228-11024247 MsG0180000777.01.T01:intron 45.0%
GAAAAAAGTTGTTGCACGCG+CGG + Chr1:11013099-11013118 None:intergenic 45.0%
GAAAGAGGAAGAGGAAAGAG+AGG + Chr1:11015076-11015095 None:intergenic 45.0%
GAACGAGCGGACAAAGAAAA+AGG + Chr1:11013008-11013027 None:intergenic 45.0%
GAAGCAGTGAGTGAAAACTC+AGG - Chr1:11022007-11022026 MsG0180000777.01.T01:intron 45.0%
GCATGATGCAAGGATTAAGG+GGG + Chr1:11018060-11018079 None:intergenic 45.0%
GCATGCAATTATGGAAGACG+GGG + Chr1:11015098-11015117 None:intergenic 45.0%
GCCAATTTGAACAACACAGG+AGG + Chr1:11013883-11013902 None:intergenic 45.0%
GCTGAAGTTCCATTTGAGTG+TGG - Chr1:11022059-11022078 MsG0180000777.01.T01:intron 45.0%
GGGCAAAATCGTCAAAAGCA+CGG + Chr1:11018486-11018505 None:intergenic 45.0%
GGTCTATTACCGATCCTGAT+TGG - Chr1:11023107-11023126 MsG0180000777.01.T01:intron 45.0%
GTTGAATCCCGGTGAGATAA+TGG - Chr1:11025443-11025462 MsG0180000777.01.T01:intron 45.0%
TAGGACTTGTCTAGCAGTGA+GGG - Chr1:11017661-11017680 MsG0180000777.01.T01:intron 45.0%
TATGAGCCATTGGACCACTT+TGG - Chr1:11020000-11020019 MsG0180000777.01.T01:intron 45.0%
TCTCTACACGAGAGAAGAAG+TGG - Chr1:11024115-11024134 MsG0180000777.01.T01:intron 45.0%
TCTGCCCATTAGAGTAAGAC+GGG + Chr1:11014642-11014661 None:intergenic 45.0%
TCTGCTGGGAGGAATTCATA+TGG - Chr1:11017080-11017099 MsG0180000777.01.T01:intron 45.0%
TGAACCACGGAGAGGTTATT+TGG - Chr1:11024241-11024260 MsG0180000777.01.T01:intron 45.0%
TGAAGCAATGTGGCCAATAG+AGG - Chr1:11024598-11024617 MsG0180000777.01.T01:intron 45.0%
TGCTCTTTGTCTCTGCAAGA+TGG - Chr1:11013965-11013984 MsG0180000777.01.T01:intron 45.0%
TGGAATCACAGAGGATCGAT+TGG + Chr1:11014492-11014511 None:intergenic 45.0%
TGTTACGACTGGAATCACAG+AGG + Chr1:11014501-11014520 None:intergenic 45.0%
TGTTCCAAATAACCTCTCCG+TGG + Chr1:11024248-11024267 None:intergenic 45.0%
TTATCTCACCGGGATTCAAC+TGG + Chr1:11025443-11025462 None:intergenic 45.0%
TTATGGCAGTAAGGGGAATG+AGG - Chr1:11025630-11025649 MsG0180000777.01.T01:intron 45.0%
TTCAAGCACAGACTTCGAGA+CGG + Chr1:11015464-11015483 None:intergenic 45.0%
TTGCCTTACGAACAACAGCA+GGG + Chr1:11016944-11016963 None:intergenic 45.0%
TTTCCCTGCTGTTGTTCGTA+AGG - Chr1:11016938-11016957 MsG0180000777.01.T01:CDS 45.0%
! AAGAGGAAAGAGAGGTGTAG+TGG + Chr1:11015068-11015087 None:intergenic 45.0%
! ACAACACGTTCTCTGGAAGA+AGG + Chr1:11018636-11018655 None:intergenic 45.0%
! AGGTTGGCCCTTTATTGAAG+AGG - Chr1:11020709-11020728 MsG0180000777.01.T01:intron 45.0%
! AGTCCTAGTGGCTTTGCAAA+AGG + Chr1:11017648-11017667 None:intergenic 45.0%
! ATGCGCATTATGGCTCTGTT+TGG - Chr1:11014738-11014757 MsG0180000777.01.T01:CDS 45.0%
! CAACGGATTCAACCTGCTAT+TGG + Chr1:11018376-11018395 None:intergenic 45.0%
! CACAAAGGAGAGTGCAAACA+TGG + Chr1:11018242-11018261 None:intergenic 45.0%
! CCCTCCTGTGTTGTTCAAAT+TGG - Chr1:11013879-11013898 MsG0180000777.01.T01:intron 45.0%
! CCGATAAGCATTGCTTCAAC+CGG + Chr1:11021658-11021677 None:intergenic 45.0%
! CGATAAGCATTGCTTCAACC+GGG + Chr1:11021657-11021676 None:intergenic 45.0%
! CGCATCTGAGACACCATTAA+AGG + Chr1:11021917-11021936 None:intergenic 45.0%
! CTGTTGGTACTGAAGCAATG+TGG - Chr1:11024588-11024607 MsG0180000777.01.T01:intron 45.0%
! GATGACCCTTTTCAGAGGTT+AGG - Chr1:11014573-11014592 MsG0180000777.01.T01:intron 45.0%
! GCAGGTTAATCATGCCCTTT+TGG - Chr1:11025088-11025107 MsG0180000777.01.T01:CDS 45.0%
! GGATGTTTTGCCTCGCTAAA+TGG - Chr1:11021225-11021244 MsG0180000777.01.T01:intron 45.0%
! GGTTGGCCCTTTATTGAAGA+GGG - Chr1:11020710-11020729 MsG0180000777.01.T01:intron 45.0%
! GTCCTAGTGGCTTTGCAAAA+GGG + Chr1:11017647-11017666 None:intergenic 45.0%
! TGACGATTTTGCCCTTCTGA+GGG - Chr1:11018492-11018511 MsG0180000777.01.T01:intron 45.0%
! TGCGCATTATGGCTCTGTTT+GGG - Chr1:11014739-11014758 MsG0180000777.01.T01:CDS 45.0%
! TTCCCTTTTGCAAAGCCACT+AGG - Chr1:11017642-11017661 MsG0180000777.01.T01:intron 45.0%
! TTGACGATTTTGCCCTTCTG+AGG - Chr1:11018491-11018510 MsG0180000777.01.T01:intron 45.0%
!! CCTTTAGTCTTGCCTCATAC+TGG + Chr1:11022701-11022720 None:intergenic 45.0%
!! TCGCTAAATGGAGCTTTGAG+TGG - Chr1:11021237-11021256 MsG0180000777.01.T01:intron 45.0%
!! AAAAAAAACTAATTTATAAA+CGG + Chr1:11014672-11014691 None:intergenic 5.0%
!! TTATTACTATTTATTAAAAT+TGG - Chr1:11017613-11017632 MsG0180000777.01.T01:intron 5.0%
!!! TTTAAAAGAAATTTATTTTA+AGG - Chr1:11022407-11022426 MsG0180000777.01.T01:intron 5.0%
AACCCACAGGATTGTTCTGC+TGG - Chr1:11017065-11017084 MsG0180000777.01.T01:intron 50.0%
AAGTGGGACGAAGAATGGGA+TGG - Chr1:11017183-11017202 MsG0180000777.01.T01:intron 50.0%
ACACACACGACACACTCTAC+AGG - Chr1:11012924-11012943 MsG0180000777.01.T01:three_prime_UTR 50.0%
ACCCACAGGATTGTTCTGCT+GGG - Chr1:11017066-11017085 MsG0180000777.01.T01:intron 50.0%
ACTTGTGATGCTTCTGCTCG+CGG - Chr1:11025736-11025755 MsG0180000777.01.T01:intron 50.0%
CACACACGACACACTCTACA+GGG - Chr1:11012925-11012944 MsG0180000777.01.T01:three_prime_UTR 50.0%
CACGGACACCTGACACAATA+CGG + Chr1:11015642-11015661 None:intergenic 50.0%
CACTGCTAGACAAGTCCTAG+TGG + Chr1:11017660-11017679 None:intergenic 50.0%
CAGTACCAACAGTGGCACAA+GGG + Chr1:11024580-11024599 None:intergenic 50.0%
CAGTGAGGGTTGTATGGATG+AGG - Chr1:11017675-11017694 MsG0180000777.01.T01:intron 50.0%
CATTATGCGTGCTAGGTGTC+TGG - Chr1:11013998-11014017 MsG0180000777.01.T01:intron 50.0%
CATTTGAGTGTGGTGAGCAG+GGG - Chr1:11022069-11022088 MsG0180000777.01.T01:intron 50.0%
CCATTTGAGTGTGGTGAGCA+GGG - Chr1:11022068-11022087 MsG0180000777.01.T01:intron 50.0%
CCTAGCACGCATAATGCCAA+AGG + Chr1:11013994-11014013 None:intergenic 50.0%
CCTTTGGCATTATGCGTGCT+AGG - Chr1:11013991-11014010 MsG0180000777.01.T01:intron 50.0%
CTAGGACTTGTCTAGCAGTG+AGG - Chr1:11017660-11017679 MsG0180000777.01.T01:intron 50.0%
CTCAGGACGGTTCTTGATCT+CGG - Chr1:11022979-11022998 MsG0180000777.01.T01:intron 50.0%
CTCTCCACCGCTTCTAATTC+TGG - Chr1:11012971-11012990 MsG0180000777.01.T01:three_prime_UTR 50.0%
CTCTGCAAGATGGACACCTT+TGG - Chr1:11013975-11013994 MsG0180000777.01.T01:intron 50.0%
CTTGCCTTACGAACAACAGC+AGG + Chr1:11016945-11016964 None:intergenic 50.0%
GAACAACACAGGAGGGTTCT+TGG + Chr1:11013875-11013894 None:intergenic 50.0%
GATGAATGCACCCTGTGCTT+TGG - Chr1:11021350-11021369 MsG0180000777.01.T01:intron 50.0%
GCAGAACAATCCTGTGGGTT+TGG + Chr1:11017065-11017084 None:intergenic 50.0%
GCATTGTTGCCGCCATACTT+GGG - Chr1:11013650-11013669 MsG0180000777.01.T01:intron 50.0%
GCCGTGATTCCCAATCACAA+CGG + Chr1:11024274-11024293 None:intergenic 50.0%
GCCGTTGTGATTGGGAATCA+CGG - Chr1:11024270-11024289 MsG0180000777.01.T01:intron 50.0%
GCCTAAGGCTAAACTCAGGA+CGG - Chr1:11022966-11022985 MsG0180000777.01.T01:intron 50.0%
GCTATGTGTTCAATGTGGCC+AGG - Chr1:11021867-11021886 MsG0180000777.01.T01:intron 50.0%
GCTGCATGCAATGCGCATTA+TGG - Chr1:11014728-11014747 MsG0180000777.01.T01:CDS 50.0%
GGAACACTGCCGTTGTGATT+GGG - Chr1:11024262-11024281 MsG0180000777.01.T01:intron 50.0%
GGAACCAGAATTAGAAGCGG+TGG + Chr1:11012978-11012997 None:intergenic 50.0%
GGAGATGAGTTACAGTTCGC+AGG - Chr1:11014551-11014570 MsG0180000777.01.T01:intron 50.0%
GGCCACATTGAACACATAGC+TGG + Chr1:11021867-11021886 None:intergenic 50.0%
GGCGCCTCATAGTAGAAACT+TGG + Chr1:11022943-11022962 None:intergenic 50.0%
GGTTGTATGGATGAGGTCCT+TGG - Chr1:11017682-11017701 MsG0180000777.01.T01:intron 50.0%
GGTTGTGTGATTGTGGGAGT+TGG - Chr1:11019116-11019135 MsG0180000777.01.T01:intron 50.0%
GTATGGATGAGGTCCTTGGT+TGG - Chr1:11017686-11017705 MsG0180000777.01.T01:intron 50.0%
GTCTAGCAGTGAGGGTTGTA+TGG - Chr1:11017669-11017688 MsG0180000777.01.T01:intron 50.0%
TCAGGACGGTTCTTGATCTC+GGG - Chr1:11022980-11022999 MsG0180000777.01.T01:intron 50.0%
TCAGTACCAACAGTGGCACA+AGG + Chr1:11024581-11024600 None:intergenic 50.0%
TCCATTTGAGTGTGGTGAGC+AGG - Chr1:11022067-11022086 MsG0180000777.01.T01:intron 50.0%
TCCCAGCAGAACAATCCTGT+GGG + Chr1:11017070-11017089 None:intergenic 50.0%
TGCAAAGAAGCCGGTATGCT+TGG + Chr1:11021494-11021513 None:intergenic 50.0%
TGGAACACTGCCGTTGTGAT+TGG - Chr1:11024261-11024280 MsG0180000777.01.T01:intron 50.0%
! ACCGTCCTGAGTTTAGCCTT+AGG + Chr1:11022970-11022989 None:intergenic 50.0%
! CATGTGACGTTTATGGTGGG+AGG - Chr1:11018329-11018348 MsG0180000777.01.T01:CDS 50.0%
! TCAGTTGATTCCCCGTCAAC+AGG + Chr1:11024156-11024175 None:intergenic 50.0%
! TTCAACCCTTGTGCCACTGT+TGG - Chr1:11024572-11024591 MsG0180000777.01.T01:intron 50.0%
!! AAAGATGGGCTGAGAGACAC+AGG + Chr1:11025242-11025261 None:intergenic 50.0%
!! ATGAAGAGCGAGCTTTGGGA+AGG - Chr1:11014810-11014829 MsG0180000777.01.T01:CDS 50.0%
!! GTCCTGAGTTTAGCCTTAGG+CGG + Chr1:11022967-11022986 None:intergenic 50.0%
!! TGAAGAGCGAGCTTTGGGAA+GGG - Chr1:11014811-11014830 MsG0180000777.01.T01:CDS 50.0%
AATCGTGCGGAAGGCTTCTC+AGG - Chr1:11017106-11017125 MsG0180000777.01.T01:intron 55.0%
ACTCGTGACGATGGCCTCTA+TGG - Chr1:11014526-11014545 MsG0180000777.01.T01:intron 55.0%
AGACTTCGAGACGGACACCT+GGG + Chr1:11015455-11015474 None:intergenic 55.0%
AGCAAGCGCAGAGGCTGAAT+AGG + Chr1:11025371-11025390 None:intergenic 55.0%
AGCACAGGGTGCAAAGAAGC+CGG + Chr1:11021503-11021522 None:intergenic 55.0%
CACAGGATTGTTCTGCTGGG+AGG - Chr1:11017069-11017088 MsG0180000777.01.T01:intron 55.0%
CCCTGCTCACCACACTCAAA+TGG + Chr1:11022071-11022090 None:intergenic 55.0%
CGCACTACGCATAGCCATAG+AGG - Chr1:11022094-11022113 MsG0180000777.01.T01:intron 55.0%
CTCCCAGCAGAACAATCCTG+TGG + Chr1:11017071-11017090 None:intergenic 55.0%
CTCCGCCTAAGGCTAAACTC+AGG - Chr1:11022962-11022981 MsG0180000777.01.T01:intron 55.0%
GAAGACGGGGAAAGAGGAAG+AGG + Chr1:11015085-11015104 None:intergenic 55.0%
GAGGGATATGAACCACGGAG+AGG - Chr1:11024233-11024252 MsG0180000777.01.T01:intron 55.0%
GGCATTGTTGCCGCCATACT+TGG - Chr1:11013649-11013668 MsG0180000777.01.T01:intron 55.0%
GTCGGAGTCCGTATTGTGTC+AGG - Chr1:11015631-11015650 MsG0180000777.01.T01:intron 55.0%
GTGACGATGGCCTCTATGGT+TGG - Chr1:11014530-11014549 MsG0180000777.01.T01:intron 55.0%
TATTCAGCCTCTGCGCTTGC+TGG - Chr1:11025370-11025389 MsG0180000777.01.T01:intron 55.0%
TGAGGTCCTTGGTTGGACGA+TGG - Chr1:11017693-11017712 MsG0180000777.01.T01:intron 55.0%
! AAGCATTGCTTCAACCGGGC+AGG + Chr1:11021653-11021672 None:intergenic 55.0%
! CGCAGGATGACCCTTTTCAG+AGG - Chr1:11014568-11014587 MsG0180000777.01.T01:intron 55.0%
! CTGCTGCTGACTGGGTTCAT+GGG - Chr1:11025192-11025211 MsG0180000777.01.T01:intron 55.0%
! TACAGCTGCTGCTGCTGACT+GGG - Chr1:11025184-11025203 MsG0180000777.01.T01:intron 55.0%
!! AGGCTGAGTGCTGATGTGTG+TGG - Chr1:11021204-11021223 MsG0180000777.01.T01:intron 55.0%
!! CTGAGTTTAGCCTTAGGCGG+AGG + Chr1:11022964-11022983 None:intergenic 55.0%
CAGACTTCGAGACGGACACC+TGG + Chr1:11015456-11015475 None:intergenic 60.0%
CTACAGCTGCTGCTGCTGAC+TGG - Chr1:11025183-11025202 MsG0180000777.01.T01:intron 60.0%
GACTTCGAGACGGACACCTG+GGG + Chr1:11015454-11015473 None:intergenic 60.0%
! GCTGCTGCTGACTGGGTTCA+TGG - Chr1:11025191-11025210 MsG0180000777.01.T01:intron 60.0%
!! AGAGCGAGCTTTGGGAAGGG+AGG - Chr1:11014814-11014833 MsG0180000777.01.T01:CDS 60.0%
CAGACTCCGGCACAGCGACA+CGG + Chr1:11015660-11015679 None:intergenic 65.0%
GGAGGAACCAGCAAGCGCAG+AGG + Chr1:11025380-11025399 None:intergenic 65.0%
! AGGTGTCCGTGTCGCTGTGC+CGG - Chr1:11015651-11015670 MsG0180000777.01.T01:intron 65.0%
! CTATGAGGCGCCTCCGCCTA+AGG - Chr1:11022951-11022970 MsG0180000777.01.T01:intron 65.0%
AGCAGGGTCCAGGTGTCCCC+AGG - Chr1:11015435-11015454 MsG0180000777.01.T01:intron 70.0%
GACGGACACCTGGGGACACC+TGG + Chr1:11015446-11015465 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 11012922 11026021 11012922 ID=MsG0180000777.01;Name=MsG0180000777.01
Chr1 mRNA 11012922 11026021 11012922 ID=MsG0180000777.01.T01;Parent=MsG0180000777.01;Name=MsG0180000777.01.T01;_AED=0.51;_eAED=0.51;_QI=129|0.54|0.58|0.66|0.81|0.75|12|160|415
Chr1 exon 11025951 11026021 11025951 ID=MsG0180000777.01.T01:exon:952;Parent=MsG0180000777.01.T01
Chr1 exon 11025813 11025862 11025813 ID=MsG0180000777.01.T01:exon:953;Parent=MsG0180000777.01.T01
Chr1 exon 11025015 11025116 11025015 ID=MsG0180000777.01.T01:exon:954;Parent=MsG0180000777.01.T01
Chr1 exon 11022816 11022917 11022816 ID=MsG0180000777.01.T01:exon:955;Parent=MsG0180000777.01.T01
Chr1 exon 11018314 11018358 11018314 ID=MsG0180000777.01.T01:exon:956;Parent=MsG0180000777.01.T01
Chr1 exon 11018150 11018241 11018150 ID=MsG0180000777.01.T01:exon:957;Parent=MsG0180000777.01.T01
Chr1 exon 11017723 11017778 11017723 ID=MsG0180000777.01.T01:exon:958;Parent=MsG0180000777.01.T01
Chr1 exon 11016931 11017054 11016931 ID=MsG0180000777.01.T01:exon:959;Parent=MsG0180000777.01.T01
Chr1 exon 11014626 11014853 11014626 ID=MsG0180000777.01.T01:exon:960;Parent=MsG0180000777.01.T01
Chr1 exon 11013657 11013851 11013657 ID=MsG0180000777.01.T01:exon:961;Parent=MsG0180000777.01.T01
Chr1 exon 11013490 11013578 11013490 ID=MsG0180000777.01.T01:exon:962;Parent=MsG0180000777.01.T01
Chr1 exon 11012922 11013304 11012922 ID=MsG0180000777.01.T01:exon:963;Parent=MsG0180000777.01.T01
Chr1 five_prime_UTR 11025951 11026021 11025951 ID=MsG0180000777.01.T01:five_prime_utr;Parent=MsG0180000777.01.T01
Chr1 five_prime_UTR 11025813 11025862 11025813 ID=MsG0180000777.01.T01:five_prime_utr;Parent=MsG0180000777.01.T01
Chr1 five_prime_UTR 11025109 11025116 11025109 ID=MsG0180000777.01.T01:five_prime_utr;Parent=MsG0180000777.01.T01
Chr1 CDS 11025015 11025108 11025015 ID=MsG0180000777.01.T01:cds;Parent=MsG0180000777.01.T01
Chr1 CDS 11022816 11022917 11022816 ID=MsG0180000777.01.T01:cds;Parent=MsG0180000777.01.T01
Chr1 CDS 11018314 11018358 11018314 ID=MsG0180000777.01.T01:cds;Parent=MsG0180000777.01.T01
Chr1 CDS 11018150 11018241 11018150 ID=MsG0180000777.01.T01:cds;Parent=MsG0180000777.01.T01
Chr1 CDS 11017723 11017778 11017723 ID=MsG0180000777.01.T01:cds;Parent=MsG0180000777.01.T01
Chr1 CDS 11016931 11017054 11016931 ID=MsG0180000777.01.T01:cds;Parent=MsG0180000777.01.T01
Chr1 CDS 11014626 11014853 11014626 ID=MsG0180000777.01.T01:cds;Parent=MsG0180000777.01.T01
Chr1 CDS 11013657 11013851 11013657 ID=MsG0180000777.01.T01:cds;Parent=MsG0180000777.01.T01
Chr1 CDS 11013490 11013578 11013490 ID=MsG0180000777.01.T01:cds;Parent=MsG0180000777.01.T01
Chr1 CDS 11013082 11013304 11013082 ID=MsG0180000777.01.T01:cds;Parent=MsG0180000777.01.T01
Chr1 three_prime_UTR 11012922 11013081 11012922 ID=MsG0180000777.01.T01:three_prime_utr;Parent=MsG0180000777.01.T01
Gene Sequence

>MsG0180000777.01.T01

ATGAAGTGTCGCTCAAAAAACGACAAAAATGAAGTTGCCAAGAACCCTCCTGTGTTGTTCAAATTGGCACTTGCTAAGATGAAAAAAGAAGAAAAATTGGCTTTGCTTCGCTCGAAAGACAACAAAAATGAAGTTGCTAAGAAGCCTCCTTTGAAGTTTGTCAAATTGTTGCTTGCTAAGCAGAAAAAAGGAGAAAGTATGAAGAGGATTAGAGAAACTGTTGAGGAGCTTCTTGATGTTAGAAATCAAGGTTGGCCCTTTATTGAAGAGGGCTCTTACAAGCTGCTGATTGAAACTATTCTTTGTAAAGAACAAACTTGTGATGAAGACAAGGGAGCTTTTTGTGTTCCTGTTGCTTTACCCAATATGTATAGGCTGAGTGCTGATGTGAATTTTTGGCAATTTGGGGGTTCCCCTTTAATGGTGTCTCAGATGCGTAAGCGTGCAGTTCAAGCTTCACGATTTATGTTGCAGATGGTTCAGATTCCATTATTCGTTAAAGAGACTGAAGCAGAATTTTGGATGATGCCATTTGGTTTCTCTACACGAGAGAAGAAGTGGTGTGAATTTGCAGAACCTGTTGACGGGGAATCAACTGAATTTTTGCGAATCTTTGCACTGAAGTATAACATGGTGATTATAAGCCCATTTCTTGAGAGGGATATGAACCACGGAGAGGTTATTTGGAACACTGCCGTTGTGATTGGGAATCACGGCAATATAATTGGGATACACAGGAAGGTTAATCATGCCCTTTTGGAAGAAATACAGCAAATTAATCGCCGAATTATTGACACAGTAGTAGACATAAGTAATGAAGATGTTGGTTCAACTACAGCTGCTGCTGCTGACTGGGTTCATGGGACCATTGTCAAATGTTCTTTCATTCCTGTGTCTCTCAGCCCATCTTTAAAATCTGAATATGCTTCACTACAGTCACCTATTCAGCCTCTGCGCTTGCTGGTTCCTCCAAATTATCCTAATTCTTCTCCCATATTCATAGACAAGTTTCCAGTTGAATCCCGTAAGGGGAATGAGGATCTTTCAGAGAAAGCAAAGGTGAAGCTTAGCATGTCCTTATGTAATTTCTCACAACCTATGTCCCTTAAGGATATAGCAAAGACTTGTGATGCTTCTGCTCGCGGTGTTATTTCCGAGTATGCACAACAATTTGGTGGAGGAACATTCAGCTCTAAGTATGGAGAATGGCACGAGTTCACATCTTGGGAAGATTTGTTAGCTGCATAA

Protein sequence

>MsG0180000777.01.T01

MKCRSKNDKNEVAKNPPVLFKLALAKMKKEEKLALLRSKDNKNEVAKKPPLKFVKLLLAKQKKGESMKRIRETVEELLDVRNQGWPFIEEGSYKLLIETILCKEQTCDEDKGAFCVPVALPNMYRLSADVNFWQFGGSPLMVSQMRKRAVQASRFMLQMVQIPLFVKETEAEFWMMPFGFSTREKKWCEFAEPVDGESTEFLRIFALKYNMVIISPFLERDMNHGEVIWNTAVVIGNHGNIIGIHRKVNHALLEEIQQINRRIIDTVVDISNEDVGSTTAAAADWVHGTIVKCSFIPVSLSPSLKSEYASLQSPIQPLRLLVPPNYPNSSPIFIDKFPVESRKGNEDLSEKAKVKLSMSLCNFSQPMSLKDIAKTCDASARGVISEYAQQFGGGTFSSKYGEWHEFTSWEDLLAA*