AlfalfaGEDB | MsG0380015166.01

M. sativa cultivar ZhongmuNo.1 / MsG0380015166.01

KEGG: K18172
GO: -
PFAM: PF08583

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015166.01.T01	XP_003600611.1	100	82	0	0	1	82	1	82	1.34E-51	166

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015166.01.T01	G7J7W8	100.000	82	0	0	1	82	1	82	6.42e-52	166

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048683.01	MsG0380015166.01	0.833636	4.760538e-56	5.514557e-53
MsG0080048982.01	MsG0380015166.01	0.818537	1.861538e-52	1.397269e-49
MsG0080049147.01	MsG0380015166.01	0.819257	1.277248e-52	9.779371e-50
MsG0180000240.01	MsG0380015166.01	-0.810413	1.167019e-50	7.029773e-48
MsG0180000271.01	MsG0380015166.01	0.801814	7.537475e-49	3.634133e-46
MsG0180000470.01	MsG0380015166.01	0.817927	2.558110e-52	1.888148e-49
MsG0180000544.01	MsG0380015166.01	-0.810024	1.415774e-50	8.442486e-48
MsG0180000550.01	MsG0380015166.01	0.806701	7.237845e-50	3.954996e-47
MsG0180000794.01	MsG0380015166.01	0.813501	2.478910e-51	1.621681e-48
MsG0180001063.01	MsG0380015166.01	0.801421	9.074401e-49	4.331781e-46
MsG0180001088.01	MsG0380015166.01	0.803113	4.070207e-49	2.028298e-46
MsG0180001663.01	MsG0380015166.01	0.821676	3.556694e-53	2.913028e-50
MsG0180001712.01	MsG0380015166.01	0.820151	7.981684e-53	6.265827e-50
MsG0180001886.01	MsG0380015166.01	0.820354	7.168772e-53	5.659168e-50
MsG0180002794.01	MsG0380015166.01	0.806241	9.052506e-50	4.889001e-47
MsG0180002955.01	MsG0380015166.01	0.814010	1.915235e-51	1.270288e-48
MsG0180003189.01	MsG0380015166.01	0.844169	8.926974e-59	1.429147e-55
MsG0180003357.01	MsG0380015166.01	0.839107	1.930837e-57	2.639414e-54
MsG0180003952.01	MsG0380015166.01	0.836594	8.537766e-57	1.080955e-53
MsG0180004025.01	MsG0380015166.01	0.815589	8.556481e-52	5.923808e-49
MsG0180004599.01	MsG0380015166.01	0.803942	2.739318e-49	1.394623e-46
MsG0180004600.01	MsG0380015166.01	0.810925	9.044632e-51	5.523725e-48
MsG0180004725.01	MsG0380015166.01	0.804438	2.160172e-49	1.113762e-46
MsG0180004765.01	MsG0380015166.01	0.829756	4.307029e-55	4.449837e-52
MsG0180004824.01	MsG0380015166.01	0.810613	1.056385e-50	6.397660e-48
MsG0180005160.01	MsG0380015166.01	0.808903	2.463859e-50	1.425988e-47
MsG0180005240.01	MsG0380015166.01	0.804287	2.322620e-49	1.192908e-46
MsG0180005268.01	MsG0380015166.01	0.806437	8.230527e-50	4.467165e-47
MsG0180005303.01	MsG0380015166.01	-0.810899	9.161740e-51	5.591317e-48
MsG0180005668.01	MsG0380015166.01	0.825033	5.842662e-54	5.264884e-51
MsG0180005881.01	MsG0380015166.01	-0.800881	1.170408e-48	5.511624e-46
MsG0180005913.01	MsG0380015166.01	0.846144	2.611986e-59	4.452798e-56
MsG0180005960.01	MsG0380015166.01	0.831667	1.465746e-55	1.601468e-52
MsG0180006096.01	MsG0380015166.01	0.819954	8.855112e-53	6.913228e-50
MsG0180006138.01	MsG0380015166.01	0.811483	6.845607e-51	4.242592e-48
MsG0280006306.01	MsG0380015166.01	-0.814607	1.413360e-51	9.526963e-49
MsG0280010722.01	MsG0380015166.01	0.805937	1.048856e-49	5.620691e-47
MsG0280011032.01	MsG0380015166.01	0.800699	1.275158e-48	5.976680e-46
MsG0280011059.01	MsG0380015166.01	-0.817004	4.128525e-52	2.971244e-49
MsG0280011073.01	MsG0380015166.01	0.808383	3.182259e-50	1.816984e-47
MsG0280011109.01	MsG0380015166.01	0.801180	1.017006e-48	4.825341e-46
MsG0280011175.01	MsG0380015166.01	0.815591	8.547742e-52	5.918084e-49
MsG0280011371.01	MsG0380015166.01	0.834290	3.265765e-56	3.858565e-53
MsG0280011376.01	MsG0380015166.01	0.853031	3.125307e-61	6.660616e-58
MsG0380011531.01	MsG0380015166.01	0.811948	5.421620e-51	3.401776e-48
MsG0380011704.01	MsG0380015166.01	0.815424	9.310185e-52	6.416520e-49
MsG0380011895.01	MsG0380015166.01	0.853740	1.956724e-61	4.270458e-58
MsG0380012005.01	MsG0380015166.01	0.840075	1.081442e-57	1.523361e-54
MsG0380012161.01	MsG0380015166.01	0.807665	4.524282e-50	2.534811e-47
MsG0380012184.01	MsG0380015166.01	0.811088	8.340298e-51	5.115255e-48
MsG0380012394.01	MsG0380015166.01	0.805009	1.641467e-49	8.588952e-47
MsG0380013853.01	MsG0380015166.01	0.850558	1.571750e-60	3.090796e-57
MsG0380014296.01	MsG0380015166.01	0.809683	1.676606e-50	9.908349e-48
MsG0380014706.01	MsG0380015166.01	0.815058	1.122933e-51	7.661722e-49
MsG0380014727.01	MsG0380015166.01	0.830029	3.696926e-55	3.849051e-52
MsG0380014770.01	MsG0380015166.01	0.819567	1.085224e-52	8.381377e-50
MsG0380014866.01	MsG0380015166.01	0.834159	3.522308e-56	4.144712e-53
MsG0380015166.01	MsG0380015497.01	0.805986	1.023931e-49	5.494233e-47
MsG0380015166.01	MsG0380015533.01	0.805025	1.629075e-49	8.527563e-47
MsG0380015166.01	MsG0380015891.01	0.802180	6.339995e-49	3.085210e-46
MsG0380015166.01	MsG0380015930.01	0.827536	1.481970e-54	1.434697e-51
MsG0380015166.01	MsG0380016004.01	0.800917	1.151020e-48	5.425177e-46
MsG0380015166.01	MsG0380016182.01	0.851081	1.119550e-60	2.239744e-57
MsG0380015166.01	MsG0380016191.01	-0.819480	1.135913e-52	8.751783e-50
MsG0380015166.01	MsG0380016581.01	0.800001	1.768955e-48	8.145654e-46
MsG0380015166.01	MsG0380016740.01	0.847306	1.256677e-59	2.223978e-56
MsG0380015166.01	MsG0380016828.01	-0.811952	5.411354e-51	3.395663e-48
MsG0380015166.01	MsG0380017023.01	0.819626	1.052211e-52	8.139354e-50
MsG0380015166.01	MsG0380017085.01	0.834273	3.296794e-56	3.893257e-53
MsG0380015166.01	MsG0380017126.01	0.825332	4.966490e-54	4.513417e-51
MsG0380015166.01	MsG0380017198.01	0.807860	4.111980e-50	2.315534e-47
MsG0380015166.01	MsG0380017263.01	-0.826750	2.285422e-54	2.162450e-51
MsG0380015166.01	MsG0380017322.01	0.839073	1.970412e-57	2.690699e-54
MsG0380015166.01	MsG0380017461.01	0.823221	1.556541e-53	1.332042e-50
MsG0380015166.01	MsG0380017891.01	-0.800506	1.396074e-48	6.511565e-46
MsG0380015166.01	MsG0380017941.01	0.812753	3.617208e-51	2.319020e-48
MsG0380015166.01	MsG0380018022.01	0.813513	2.464560e-51	1.612775e-48
MsG0380015166.01	MsG0480018236.01	0.811103	8.275047e-51	5.077347e-48
MsG0380015166.01	MsG0480018402.01	0.823634	1.246256e-53	1.079092e-50
MsG0380015166.01	MsG0480018847.01	0.818822	1.603617e-52	1.213141e-49
MsG0380015166.01	MsG0480018883.01	0.831906	1.279709e-55	1.408286e-52
MsG0380015166.01	MsG0480018911.01	0.822571	2.205563e-53	1.853272e-50
MsG0380015166.01	MsG0480019408.01	0.802787	4.753365e-49	2.349327e-46
MsG0380015166.01	MsG0480020024.01	0.833165	6.237428e-56	7.124944e-53
MsG0380015166.01	MsG0480020025.01	0.814214	1.726852e-51	1.151635e-48
MsG0380015166.01	MsG0480020788.01	0.823695	1.206126e-53	1.046259e-50
MsG0380015166.01	MsG0480020887.01	0.824289	8.749532e-54	7.716341e-51
MsG0380015166.01	MsG0480021041.01	0.819930	8.967108e-53	6.996052e-50
MsG0380015166.01	MsG0480021061.01	0.816474	5.428538e-52	3.850263e-49
MsG0380015166.01	MsG0480021215.01	0.802811	4.699894e-49	2.324350e-46
MsG0380015166.01	MsG0480021280.01	0.805190	1.504405e-49	7.908542e-47
MsG0380015166.01	MsG0480021776.01	-0.820291	7.411182e-53	5.840203e-50
MsG0380015166.01	MsG0480021838.01	0.813217	2.862663e-51	1.858102e-48
MsG0380015166.01	MsG0480021869.01	0.812535	4.036830e-51	2.573410e-48
MsG0380015166.01	MsG0480021959.01	0.821762	3.397280e-53	2.789211e-50
MsG0380015166.01	MsG0480022222.01	0.806594	7.627131e-50	4.156133e-47
MsG0380015166.01	MsG0480022739.01	-0.829848	4.090164e-55	4.237353e-52
MsG0380015166.01	MsG0480023251.01	0.807700	4.446805e-50	2.493694e-47
MsG0380015166.01	MsG0480023638.01	0.827744	1.321098e-54	1.286749e-51
MsG0380015166.01	MsG0480023660.01	0.855866	4.731622e-62	1.108033e-58
MsG0380015166.01	MsG0480023776.01	0.808425	3.117560e-50	1.781965e-47
MsG0380015166.01	MsG0480023867.01	0.821193	4.599175e-53	3.716494e-50
MsG0380015166.01	MsG0480023943.01	0.805795	1.123506e-49	5.998830e-47
MsG0380015166.01	MsG0480023994.01	0.813503	2.477166e-51	1.620602e-48
MsG0380015166.01	MsG0580024084.01	0.803903	2.791845e-49	1.419900e-46
MsG0380015166.01	MsG0580024161.01	0.803077	4.141314e-49	2.061778e-46
MsG0380015166.01	MsG0580024495.01	0.834405	3.054274e-56	3.621208e-53
MsG0380015166.01	MsG0580025448.01	0.807452	5.020003e-50	2.797169e-47
MsG0380015166.01	MsG0580025467.01	0.822694	2.065748e-53	1.741701e-50
MsG0380015166.01	MsG0580025638.01	0.813520	2.455745e-51	1.607323e-48
MsG0380015166.01	MsG0580026340.01	0.816886	4.389011e-52	3.148324e-49
MsG0380015166.01	MsG0580026439.01	0.802452	5.571919e-49	2.730435e-46
MsG0380015166.01	MsG0580027034.01	0.806515	7.924227e-50	4.309524e-47
MsG0380015166.01	MsG0580027103.01	0.801680	8.032180e-49	3.859262e-46
MsG0380015166.01	MsG0580027124.01	0.838168	3.374872e-57	4.482928e-54
MsG0380015166.01	MsG0580028044.01	0.808852	2.526825e-50	1.460465e-47
MsG0380015166.01	MsG0580028551.01	0.803542	3.317254e-49	1.671518e-46
MsG0380015166.01	MsG0580028901.01	0.817959	2.516053e-52	1.858628e-49
MsG0380015166.01	MsG0580029376.01	0.823683	1.213690e-53	1.052432e-50
MsG0380015166.01	MsG0580029514.01	-0.815483	9.035760e-52	6.237772e-49
MsG0380015166.01	MsG0580029717.01	0.822583	2.191742e-53	1.842270e-50
MsG0380015166.01	MsG0580029794.01	0.816945	4.256858e-52	3.058730e-49
MsG0380015166.01	MsG0580029879.01	0.848251	6.903588e-60	1.259209e-56
MsG0380015166.01	MsG0580029925.01	0.804623	1.976331e-49	1.023848e-46
MsG0380015166.01	MsG0580029999.01	-0.828029	1.128425e-54	1.108351e-51
MsG0380015166.01	MsG0680030415.01	0.841467	4.667711e-58	6.865464e-55
MsG0380015166.01	MsG0680030555.01	0.824997	5.959012e-54	5.364119e-51
MsG0380015166.01	MsG0680030597.01	0.802694	4.967417e-49	2.449262e-46
MsG0380015166.01	MsG0680030636.01	0.821618	3.669638e-53	3.000381e-50
MsG0380015166.01	MsG0680030992.01	0.829155	6.027997e-55	6.118625e-52
MsG0380015166.01	MsG0680031334.01	0.838605	2.604185e-57	3.505986e-54
MsG0380015166.01	MsG0680031355.01	0.843348	1.481294e-58	2.311242e-55
MsG0380015166.01	MsG0680031377.01	-0.831676	1.458429e-55	1.593953e-52
MsG0380015166.01	MsG0680031815.01	0.829216	5.828596e-55	5.927138e-52
MsG0380015166.01	MsG0680032058.01	0.826595	2.488497e-54	2.344084e-51
MsG0380015166.01	MsG0680032460.01	-0.815612	8.454404e-52	5.857373e-49
MsG0380015166.01	MsG0680032996.01	0.820738	5.852506e-53	4.669341e-50
MsG0380015166.01	MsG0680033459.01	0.809481	1.852150e-50	1.088693e-47
MsG0380015166.01	MsG0680034451.01	0.822638	2.128509e-53	1.791859e-50
MsG0380015166.01	MsG0780035957.01	0.839795	1.279727e-57	1.786768e-54
MsG0380015166.01	MsG0780036117.01	0.840396	8.918747e-58	1.268817e-54
MsG0380015166.01	MsG0780036128.01	0.804283	2.326832e-49	1.194952e-46
MsG0380015166.01	MsG0780036183.01	0.824521	7.717440e-54	6.852232e-51
MsG0380015166.01	MsG0780036190.01	0.815159	1.066559e-51	7.296897e-49
MsG0380015166.01	MsG0780036880.01	0.802957	4.384378e-49	2.176244e-46
MsG0380015166.01	MsG0780036978.01	0.857518	1.545555e-62	3.825079e-59
MsG0380015166.01	MsG0780037082.01	0.856683	2.725112e-62	6.556228e-59
MsG0380015166.01	MsG0780037330.01	0.818418	1.981186e-52	1.482280e-49
MsG0380015166.01	MsG0780038092.01	0.803575	3.264932e-49	1.646593e-46
MsG0380015166.01	MsG0780038644.01	0.812049	5.154323e-51	3.242792e-48
MsG0380015166.01	MsG0780038833.01	0.812125	4.962245e-51	3.128537e-48
MsG0380015166.01	MsG0780038907.01	0.803973	2.699865e-49	1.375553e-46
MsG0380015166.01	MsG0780039143.01	0.836904	7.116580e-57	9.095132e-54
MsG0380015166.01	MsG0780039438.01	0.811780	5.897826e-51	3.683920e-48
MsG0380015166.01	MsG0780039867.01	-0.814903	1.215272e-51	8.256975e-49
MsG0380015166.01	MsG0780040375.01	-0.824760	6.777019e-54	6.059344e-51
MsG0380015166.01	MsG0780040576.01	-0.801617	8.275664e-49	3.969881e-46
MsG0380015166.01	MsG0780040579.01	-0.801289	9.658277e-49	4.595242e-46
MsG0380015166.01	MsG0780040596.01	0.837933	3.880010e-57	5.117488e-54
MsG0380015166.01	MsG0780040734.01	0.819196	1.318708e-52	1.007944e-49
MsG0380015166.01	MsG0780041015.01	-0.834758	2.490431e-56	2.983566e-53
MsG0380015166.01	MsG0780041101.01	0.805151	1.533347e-49	8.052642e-47
MsG0380015166.01	MsG0780041187.01	0.800837	1.194921e-48	5.620621e-46
MsG0380015166.01	MsG0780041387.01	0.823395	1.417686e-53	1.219036e-50
MsG0380015166.01	MsG0780041435.01	0.808259	3.381060e-50	1.924252e-47
MsG0380015166.01	MsG0780041441.01	0.807172	5.756551e-50	3.184151e-47
MsG0380015166.01	MsG0780041507.01	0.843315	1.511113e-58	2.355396e-55
MsG0380015166.01	MsG0780041729.01	-0.822286	2.568763e-53	2.140880e-50
MsG0380015166.01	MsG0780041747.01	0.811226	7.783033e-51	4.790867e-48
MsG0380015166.01	MsG0880042118.01	0.809678	1.680766e-50	9.931605e-48
MsG0380015166.01	MsG0880042134.01	0.801935	7.119368e-49	3.442949e-46
MsG0380015166.01	MsG0880042161.01	0.813025	3.153342e-51	2.036267e-48
MsG0380015166.01	MsG0880042434.01	0.801414	9.106993e-49	4.346463e-46
MsG0380015166.01	MsG0880042576.01	0.808489	3.021033e-50	1.729664e-47
MsG0380015166.01	MsG0880042622.01	0.856799	2.519482e-62	6.084291e-59
MsG0380015166.01	MsG0880042700.01	0.825194	5.355123e-54	4.847526e-51
MsG0380015166.01	MsG0880042966.01	0.803101	4.092847e-49	2.038930e-46
MsG0380015166.01	MsG0880043014.01	0.807376	5.208713e-50	2.896559e-47
MsG0380015166.01	MsG0880043172.01	0.801928	7.144050e-49	3.454297e-46
MsG0380015166.01	MsG0880043454.01	0.818411	1.988013e-52	1.487136e-49
MsG0380015166.01	MsG0880043509.01	0.842547	2.419998e-58	3.681944e-55
MsG0380015166.01	MsG0880044640.01	0.802300	5.988291e-49	2.923243e-46
MsG0380015166.01	MsG0880044728.01	0.821977	3.030861e-53	2.503514e-50
MsG0380015166.01	MsG0880044967.01	0.819434	1.163871e-52	8.955351e-50
MsG0380015166.01	MsG0880045362.01	0.843168	1.654379e-58	2.566214e-55
MsG0380015166.01	MsG0880045371.01	0.819372	1.202377e-52	9.234861e-50
MsG0380015166.01	MsG0880045765.01	0.846286	2.389410e-59	4.092149e-56
MsG0380015166.01	MsG0880045992.01	0.803874	2.830374e-49	1.438433e-46
MsG0380015166.01	MsG0880046457.01	0.831688	1.448829e-55	1.584001e-52
MsG0380015166.01	MsG0880046620.01	0.809476	1.856953e-50	1.091357e-47
MsG0380015166.01	MsG0880046790.01	0.801102	1.055103e-48	4.996559e-46
MsG0380015166.01	MsG0880046963.01	-0.827884	1.222716e-54	1.195823e-51
MsG0380015166.01	MsG0880047052.01	0.833848	4.211636e-56	4.910737e-53
MsG0380015166.01	MsG0880047294.01	0.820109	8.160669e-53	6.399558e-50
MsG0380015166.01	MsG0880047763.01	0.821153	4.697352e-53	3.791444e-50
MsG0280006589.01	MsG0380015166.01	0.805025	1.628988e-49	8.527127e-47
MsG0280006634.01	MsG0380015166.01	0.820813	5.625617e-53	4.497875e-50
MsG0280006669.01	MsG0380015166.01	0.821994	3.002487e-53	2.481362e-50
MsG0280006694.01	MsG0380015166.01	0.806247	9.026232e-50	4.875567e-47
MsG0280006753.01	MsG0380015166.01	-0.807434	5.063616e-50	2.820058e-47
MsG0280007064.01	MsG0380015166.01	0.809794	1.586285e-50	9.402461e-48
MsG0280007547.01	MsG0380015166.01	0.836646	8.284318e-57	1.050408e-53
MsG0280007743.01	MsG0380015166.01	-0.800297	1.539895e-48	7.144788e-46
MsG0280008112.01	MsG0380015166.01	0.828796	7.368158e-55	7.399751e-52
MsG0280008113.01	MsG0380015166.01	0.814210	1.729707e-51	1.153439e-48
MsG0280008894.01	MsG0380015166.01	0.816163	6.371256e-52	4.480752e-49
MsG0280008928.01	MsG0380015166.01	0.813840	2.087637e-51	1.378243e-48
MsG0280008929.01	MsG0380015166.01	0.811969	5.367087e-51	3.369351e-48
MsG0280009395.01	MsG0380015166.01	-0.808182	3.510949e-50	1.994120e-47
MsG0280009578.01	MsG0380015166.01	0.802543	5.336244e-49	2.620971e-46
MsG0280010013.01	MsG0380015166.01	0.803853	2.859362e-49	1.452337e-46
MsG0280010182.01	MsG0380015166.01	0.803618	3.199419e-49	1.615214e-46
MsG0280010184.01	MsG0380015166.01	0.804325	2.280986e-49	1.172657e-46
MsG0280010204.01	MsG0380015166.01	0.807568	4.742776e-50	2.650526e-47
MsG0280010205.01	MsG0380015166.01	0.812697	3.721943e-51	2.382700e-48
MsG0280010216.01	MsG0380015166.01	0.816535	5.260952e-52	3.737581e-49
MsG0280010288.01	MsG0380015166.01	0.820052	8.408149e-53	6.582658e-50
MsG0280010349.01	MsG0380015166.01	0.815893	7.320175e-52	5.109896e-49
MsG0280010434.01	MsG0380015166.01	0.808858	2.519506e-50	1.456482e-47
MsG0280010517.01	MsG0380015166.01	0.811210	7.847560e-51	4.828550e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015166.01.T01	MTR_3g064240	100.000	82	0	0	1	82	1	82	1.63e-55	166

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015166.01.T01	AT4G21192	75.000	80	20	0	1	80	1	80	6.26e-42	132
MsG0380015166.01.T01	AT4G21192	75.000	80	20	0	1	80	1	80	6.26e-42	132

Find 9 sgRNAs with CRISPR-Local

Find 51 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATCCTATTGCAAAATTCTT+TGG	0.235808	3:+66079659	MsG0380015166.01.T01:CDS
TACAGAATTGAAAATAAAAT+TGG	0.247760	3:+66079688	MsG0380015166.01.T01:CDS
GGATGTTTGTGCAATGTTAA+AGG	0.281917	3:-66078912	None:intergenic
ACAGAAAGCTGTGAAGAGAA+AGG	0.562696	3:+66079844	MsG0380015166.01.T01:intron
TGAAAAGAGCAAAGAACTCA+AGG	0.575643	3:+66079874	MsG0380015166.01.T01:CDS
AAACTCACTTCAGCGCACAT+AGG	0.624864	3:-66078933	None:intergenic
GGAGTTTCAAAAGTGTCATG+TGG	0.640065	3:+66079634	MsG0380015166.01.T01:CDS
GTGCTTAATGCAGATTATCG+AGG	0.649835	3:+66079613	MsG0380015166.01.T01:intron
TGTTTGTGCAATGTTAAAGG+AGG	0.660285	3:-66078909	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GAACTTTAACATAAAAAATA+AGG	-	Chr3:66079765-66079784	None:intergenic	15.0%
!!	TACAGAATTGAAAATAAAAT+TGG	+	Chr3:66079688-66079707	MsG0380015166.01.T01:CDS	15.0%
!!!	AATTGATTCTAAATCCATTA+TGG	-	Chr3:66079493-66079512	None:intergenic	20.0%
!!!	GATAATTTATCTTTTTCCTT+TGG	+	Chr3:66079539-66079558	MsG0380015166.01.T01:intron	20.0%
!	CATTTCATTGTTTCAATATC+AGG	-	Chr3:66079136-66079155	None:intergenic	25.0%
!	GAAATTAGTAGTTGAAAGTT+TGG	+	Chr3:66079098-66079117	MsG0380015166.01.T01:intron	25.0%
!	TCAAATAAGTCAACTCAAAT+AGG	-	Chr3:66079168-66079187	None:intergenic	25.0%
!!	GTACAAGTTATAAGCTATTT+TGG	-	Chr3:66079293-66079312	None:intergenic	25.0%
	ATATTTCCATGTCCATGTTA+TGG	+	Chr3:66079068-66079087	MsG0380015166.01.T01:intron	30.0%
	ATTTCCATTATCCCATAACA+TGG	-	Chr3:66079083-66079102	None:intergenic	30.0%
	CATCCTATTGCAAAATTCTT+TGG	+	Chr3:66079659-66079678	MsG0380015166.01.T01:CDS	30.0%
	GAAACAATGAAATGTGACTT+GGG	+	Chr3:66079142-66079161	MsG0380015166.01.T01:intron	30.0%
	TATTTCCATGTCCATGTTAT+GGG	+	Chr3:66079069-66079088	MsG0380015166.01.T01:intron	30.0%
	TGAAACAATGAAATGTGACT+TGG	+	Chr3:66079141-66079160	MsG0380015166.01.T01:intron	30.0%
	TTAAAGTATGCTATCGCATA+AGG	-	Chr3:66079585-66079604	None:intergenic	30.0%
!	AGGAACAATTACGAGTTTTA+AGG	+	Chr3:66079894-66079913	MsG0380015166.01.T01:CDS	30.0%
!	TTCTTTGCTCTTTTCAAAGT+TGG	-	Chr3:66079870-66079889	None:intergenic	30.0%
	ATACCACTTGTGAGACTATT+TGG	+	Chr3:66079202-66079221	MsG0380015166.01.T01:intron	35.0%
	ATGTCCATGTTATGGGATAA+TGG	+	Chr3:66079076-66079095	MsG0380015166.01.T01:intron	35.0%
	ATTATCCCATAACATGGACA+TGG	-	Chr3:66079077-66079096	None:intergenic	35.0%
	CAATACATCTTAGTGGCTTA+AGG	-	Chr3:66079420-66079439	None:intergenic	35.0%
	GCGATAGCATACTTTAATTC+AGG	+	Chr3:66079588-66079607	MsG0380015166.01.T01:intron	35.0%
	GGATGTTTGTGCAATGTTAA+AGG	-	Chr3:66078915-66078934	None:intergenic	35.0%
	TACCACTTGTGAGACTATTT+GGG	+	Chr3:66079203-66079222	MsG0380015166.01.T01:intron	35.0%
	TGAAAAGAGCAAAGAACTCA+AGG	+	Chr3:66079874-66079893	MsG0380015166.01.T01:CDS	35.0%
	TGTTTGTGCAATGTTAAAGG+AGG	-	Chr3:66078912-66078931	None:intergenic	35.0%
!	ATTATGGAGTGCCAAAGTAA+GGG	-	Chr3:66079477-66079496	None:intergenic	35.0%
!	TCGCCAAAGAATTTTGCAAT+AGG	-	Chr3:66079665-66079684	None:intergenic	35.0%
!!	AGTTTGATCTGCTTTTCTTG+TGG	+	Chr3:66079795-66079814	MsG0380015166.01.T01:intron	35.0%
	AACAAGCTGTTTACTGGAAC+AGG	+	Chr3:66079393-66079412	MsG0380015166.01.T01:intron	40.0%
	ACAAGCTGTTTACTGGAACA+GGG	+	Chr3:66079394-66079413	MsG0380015166.01.T01:intron	40.0%
	ACAGAAAGCTGTGAAGAGAA+AGG	+	Chr3:66079844-66079863	MsG0380015166.01.T01:intron	40.0%
	ATGACAACTTTCAGCACCAA+AGG	-	Chr3:66079558-66079577	None:intergenic	40.0%
	CAGTTGGAATTCCCTTACTT+TGG	+	Chr3:66079463-66079482	MsG0380015166.01.T01:intron	40.0%
	CCACTAAGATGTATTGCCAA+GGG	+	Chr3:66079424-66079443	MsG0380015166.01.T01:intron	40.0%
	CTTACTTTGGCACTCCATAA+TGG	+	Chr3:66079476-66079495	MsG0380015166.01.T01:intron	40.0%
	GTGCTTAATGCAGATTATCG+AGG	+	Chr3:66079613-66079632	MsG0380015166.01.T01:intron	40.0%
	TAAGGGAATTCCAACTGACA+GGG	-	Chr3:66079460-66079479	None:intergenic	40.0%
	TGTTTGGCAGCTTATAGCAT+AGG	-	Chr3:66079377-66079396	None:intergenic	40.0%
	TTCTCTTCACAGCTTTCTGT+TGG	-	Chr3:66079844-66079863	None:intergenic	40.0%
!	CATTATGGAGTGCCAAAGTA+AGG	-	Chr3:66079478-66079497	None:intergenic	40.0%
!	GTTCCAGTAAACAGCTTGTT+TGG	-	Chr3:66079393-66079412	None:intergenic	40.0%
!!	GGAGTTTCAAAAGTGTCATG+TGG	+	Chr3:66079634-66079653	MsG0380015166.01.T01:CDS	40.0%
	AAACTCACTTCAGCGCACAT+AGG	-	Chr3:66078936-66078955	None:intergenic	45.0%
	CCCTTGGCAATACATCTTAG+TGG	-	Chr3:66079427-66079446	None:intergenic	45.0%
	CTCCCAAATAGTCTCACAAG+TGG	-	Chr3:66079208-66079227	None:intergenic	45.0%
	CTGCCAAACAAGCTGTTTAC+TGG	+	Chr3:66079387-66079406	MsG0380015166.01.T01:intron	45.0%
	GCCACTAAGATGTATTGCCA+AGG	+	Chr3:66079423-66079442	MsG0380015166.01.T01:intron	45.0%
	GTAAGGGAATTCCAACTGAC+AGG	-	Chr3:66079461-66079480	None:intergenic	45.0%
	TTATCTGTTGCCCTGTCAGT+TGG	+	Chr3:66079447-66079466	MsG0380015166.01.T01:intron	45.0%
	ACAGGGCAACAGATAACCCT+TGG	-	Chr3:66079443-66079462	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	66078903	66079946	66078903	ID=MsG0380015166.01;Name=MsG0380015166.01
Chr3	mRNA	66078903	66079946	66078903	ID=MsG0380015166.01.T01;Parent=MsG0380015166.01;Name=MsG0380015166.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|0\|0\|1\|0\|0\|3\|0\|82
Chr3	exon	66078903	66078947	66078903	ID=MsG0380015166.01.T01:exon:13278;Parent=MsG0380015166.01.T01
Chr3	exon	66079626	66079730	66079626	ID=MsG0380015166.01.T01:exon:13279;Parent=MsG0380015166.01.T01
Chr3	exon	66079848	66079946	66079848	ID=MsG0380015166.01.T01:exon:13280;Parent=MsG0380015166.01.T01
Chr3	CDS	66078903	66078947	66078903	ID=MsG0380015166.01.T01:cds;Parent=MsG0380015166.01.T01
Chr3	CDS	66079626	66079730	66079626	ID=MsG0380015166.01.T01:cds;Parent=MsG0380015166.01.T01
Chr3	CDS	66079848	66079946	66079848	ID=MsG0380015166.01.T01:cds;Parent=MsG0380015166.01.T01

Gene Sequence	>MsG0380015166.01.T01 ATGCATCCTCCTTTAACATTGCACAAACATCCTATGTGCGCTGAAATTATCGAGGAGTTTCAAAAGTGTCATGTGGAACATCCTATTGCAAAATTCTTTGGCGAATGTACAGAATTGAAAATAAAATTGGATCGCTGCTTCAGAGCAGAAAAAGCTGTGAAGAGAAAGGCCAACTTTGAAAAGAGCAAAGAACTCAAGGAACAATTACGAGTTTTAAGGAAAGAAAATGCTGCAAGCAACAGTCAATAG
Protein sequence	>MsG0380015166.01.T01 MHPPLTLHKHPMCAEIIEEFQKCHVEHPIAKFFGECTELKIKLDRCFRAEKAVKRKANFEKSKELKEQLRVLRKENAASNSQ*