AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040734.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040734.01.T01 MTR_7g096840 97.765 179 4 0 1 179 1 179 6.70e-125 349
MsG0780040734.01.T02 MTR_7g096840 97.765 179 4 0 1 179 1 179 6.70e-125 349
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040734.01.T01 AT2G44820 58.268 127 50 2 24 149 20 144 2.69e-36 125
MsG0780040734.01.T01 AT2G44820 58.268 127 50 2 24 149 39 163 3.21e-36 125
MsG0780040734.01.T02 AT2G44820 58.268 127 50 2 24 149 20 144 2.69e-36 125
MsG0780040734.01.T02 AT2G44820 58.268 127 50 2 24 149 39 163 3.21e-36 125

Find 44 sgRNAs with CRISPR-Local

Find 382 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTATTGTTATGTTCTCT+TGG 0.258679 7:+81776606 None:intergenic
AACACAGGCAGTGATGATTT+TGG 0.268752 7:+81781410 None:intergenic
TTGGTTTCACTGATCAATTT+TGG 0.272989 7:+81781429 None:intergenic
AAGAGAAAATACTGAAGTTT+TGG 0.276418 7:+81776544 None:intergenic
TGAACAACAAAAGGAGGAAT+AGG 0.325431 7:-81781169 MsG0780040734.01.T01:five_prime_UTR
AATGGACATCAGGAAGATTA+TGG 0.351249 7:-81776574 MsG0780040734.01.T01:CDS
GGAAGGGGAAGCGACTGGTC+AGG 0.378735 7:+81781286 None:intergenic
TTATAGCAAACTCGCGTTTG+AGG 0.379144 7:-81781367 MsG0780040734.01.T01:five_prime_UTR
AATGAGAACTAGAGGATAGA+TGG 0.399091 7:+81781207 None:intergenic
AGAGAAAGAGAGAGCATTGA+AGG 0.406638 7:-81781475 MsG0780040734.01.T01:five_prime_UTR
CACTGCCTGTGTTGTTGCAT+TGG 0.419073 7:-81781400 MsG0780040734.01.T01:five_prime_UTR
AGGAAAATGAAATGGACATC+AGG 0.425149 7:-81776584 MsG0780040734.01.T01:CDS
TTATTGTTATGTTCTCTTGG+AGG 0.434023 7:+81776609 None:intergenic
GAACAACAAAAGGAGGAATA+GGG 0.437611 7:-81781168 MsG0780040734.01.T01:five_prime_UTR
TGCCTGTGTTGTTGCATTGG+AGG 0.443561 7:-81781397 MsG0780040734.01.T01:five_prime_UTR
TCAATGCTCTCTCTTTCTCT+AGG 0.445760 7:+81781478 None:intergenic
CAATAAGCAGGAAAATGAAA+TGG 0.447339 7:-81776592 MsG0780040734.01.T01:CDS
ACTAGAGGATAGATGGATGT+TGG 0.474704 7:+81781214 None:intergenic
GAAGGGGAAGCGACTGGTCA+GGG 0.487527 7:+81781287 None:intergenic
GTGTGGCGGCGGCTGAGAGA+TGG 0.495623 7:+81781258 None:intergenic
GTGACTAGTGTGTGTGGCGG+CGG 0.498056 7:+81781247 None:intergenic
ATAGATGGATGTTGGATTGG+TGG 0.502454 7:+81781222 None:intergenic
CTGAGAGATGGAGGTTGGAA+GGG 0.507687 7:+81781270 None:intergenic
ATTGAAAGAGAGAAGACGTA+AGG 0.507830 7:+81776685 None:intergenic
AGGATAGATGGATGTTGGAT+TGG 0.508202 7:+81781219 None:intergenic
AATAGGGAAAACGAAATTGA+AGG 0.509739 7:-81781152 MsG0780040734.01.T01:intron
TTGAAAGAGAGAAGACGTAA+GGG 0.511733 7:+81776686 None:intergenic
GCTGAGAGATGGAGGTTGGA+AGG 0.517895 7:+81781269 None:intergenic
TGAGAGATGGAGGTTGGAAG+GGG 0.517966 7:+81781271 None:intergenic
AAGAAACAAGCTCACGGACG+TGG 0.521086 7:-81776633 MsG0780040734.01.T01:CDS
ATCAAATAAATGAGAACTAG+AGG 0.533664 7:+81781199 None:intergenic
AAGAGAACATAACAATAAGC+AGG 0.534086 7:-81776604 MsG0780040734.01.T01:CDS
TTCTATTGAACAACAAAAGG+AGG 0.543428 7:-81781175 MsG0780040734.01.T01:five_prime_UTR
GGCGGCTGAGAGATGGAGGT+TGG 0.560293 7:+81781265 None:intergenic
TGAAAGAGAGAAGACGTAAG+GGG 0.579897 7:+81776687 None:intergenic
GATGGATGTTGGATTGGTGG+TGG 0.585879 7:+81781225 None:intergenic
AGGTTGGAAGGGGAAGCGAC+TGG 0.591488 7:+81781281 None:intergenic
AAGGGGAAGCGACTGGTCAG+GGG 0.616975 7:+81781288 None:intergenic
TGGCGGCGGCTGAGAGATGG+AGG 0.631330 7:+81781261 None:intergenic
GCGTTTGAGGCTACGAAACG+CGG 0.639783 7:-81781354 MsG0780040734.01.T01:five_prime_UTR
ATCCTCCAATGCAACAACAC+AGG 0.641863 7:+81781395 None:intergenic
TACAAGAAGAAACAAGCTCA+CGG 0.651983 7:-81776639 MsG0780040734.01.T01:CDS
GTGGTGACTAGTGTGTGTGG+CGG 0.658560 7:+81781244 None:intergenic
GTGGTGGTGACTAGTGTGTG+TGG 0.710488 7:+81781241 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTTATTTATAATAAA+AGG + Chr7:81777824-81777843 None:intergenic 0.0%
!! ATTGTAAGATAATAAAAATT+AGG + Chr7:81777379-81777398 None:intergenic 10.0%
!! TATGTATATTATTTAGATTT+AGG - Chr7:81779182-81779201 MsG0780040734.01.T01:intron 10.0%
!!! ATTTCATTATTTTAAATTTG+GGG - Chr7:81780500-81780519 MsG0780040734.01.T01:intron 10.0%
!!! CATTTCATTATTTTAAATTT+GGG - Chr7:81780499-81780518 MsG0780040734.01.T01:intron 10.0%
!!! TCATTTCATTATTTTAAATT+TGG - Chr7:81780498-81780517 MsG0780040734.01.T01:intron 10.0%
!!! TTTTTTTTTATTTTAAACCA+AGG - Chr7:81776552-81776571 MsG0780040734.01.T01:intron 10.0%
!! AAACAAAAACAACAAAAATA+AGG - Chr7:81776244-81776263 MsG0780040734.01.T01:intron 15.0%
!! TAAAAAAAATCCAAAACAAA+CGG - Chr7:81777050-81777069 MsG0780040734.01.T01:intron 15.0%
!! TACTACAATATACAATATAT+AGG + Chr7:81778491-81778510 None:intergenic 15.0%
!! TGTGTTTGTTTAAAAAATAA+AGG + Chr7:81777856-81777875 None:intergenic 15.0%
!! TTGAATAAACTAAACTAATA+AGG + Chr7:81779245-81779264 None:intergenic 15.0%
!! TTGTTAAACAAAAAAATAAC+AGG - Chr7:81776421-81776440 MsG0780040734.01.T01:intron 15.0%
!! TTTATTTATAATAAAAGGCA+AGG + Chr7:81777819-81777838 None:intergenic 15.0%
!!! AATGATTTTTTCATCAAAAA+TGG - Chr7:81776975-81776994 MsG0780040734.01.T01:intron 15.0%
!!! TAATAATTGTTGCTTAATAT+TGG - Chr7:81775892-81775911 MsG0780040734.01.T01:intron 15.0%
!!! TACTATATTAGTTTATGTTT+TGG - Chr7:81778345-81778364 MsG0780040734.01.T01:intron 15.0%
!!! TACTGTTTTTGTAAAATAAA+AGG + Chr7:81777935-81777954 None:intergenic 15.0%
!!! TGATTTTATGCTTTATTATT+GGG + Chr7:81779684-81779703 None:intergenic 15.0%
!!! TTTTACCTTCTTTTTTATAA+TGG - Chr7:81780565-81780584 MsG0780040734.01.T01:intron 15.0%
!!! TTTTTATTATCTTACAATCA+AGG - Chr7:81777381-81777400 MsG0780040734.01.T01:intron 15.0%
!!! TTTTTGTTTTTATGAAATAG+CGG + Chr7:81776233-81776252 None:intergenic 15.0%
!! AAAAAAAATCCAAAACAAAC+GGG - Chr7:81777051-81777070 MsG0780040734.01.T01:intron 20.0%
!! AAAGTAAGTGATTTATAAGA+AGG + Chr7:81777763-81777782 None:intergenic 20.0%
!! AAATGAATGATTTAAAAGCT+TGG + Chr7:81780061-81780080 None:intergenic 20.0%
!! AAATTATGGATAAAATCTTG+GGG - Chr7:81779356-81779375 MsG0780040734.01.T01:intron 20.0%
!! AGAAATTATGGATAAAATCT+TGG - Chr7:81779354-81779373 MsG0780040734.01.T01:intron 20.0%
!! AGATTTCCATTTGATTATTA+TGG - Chr7:81776757-81776776 MsG0780040734.01.T01:intron 20.0%
!! CAAAAATAGAACAAGATAAA+AGG + Chr7:81781370-81781389 None:intergenic 20.0%
!! CTAATATAGTATATGAAGTT+TGG + Chr7:81778336-81778355 None:intergenic 20.0%
!! GAAATTATGGATAAAATCTT+GGG - Chr7:81779355-81779374 MsG0780040734.01.T01:intron 20.0%
!! GATTTCCATTTGATTATTAT+GGG - Chr7:81776758-81776777 MsG0780040734.01.T01:intron 20.0%
!! TAAAGGAAAAAAATCAACTT+AGG + Chr7:81779910-81779929 None:intergenic 20.0%
!! TATAAGATTGATATTGAATG+CGG - Chr7:81779382-81779401 MsG0780040734.01.T01:intron 20.0%
!! TATTATTATGCAAAGTTGTA+TGG - Chr7:81778838-81778857 MsG0780040734.01.T01:intron 20.0%
!! TGATAAGAATGAATTTGAAT+TGG - Chr7:81780444-81780463 MsG0780040734.01.T01:intron 20.0%
!! TGCTGGATATATTTATTAAT+TGG - Chr7:81779305-81779324 MsG0780040734.01.T01:intron 20.0%
!! TGTTGGAGTTAAATAATTTA+TGG - Chr7:81780523-81780542 MsG0780040734.01.T01:intron 20.0%
!! TTGTTATGTTATGTATTGTT+AGG - Chr7:81779129-81779148 MsG0780040734.01.T01:intron 20.0%
!! TTGTTTAAAAAATAAAGGCA+AGG + Chr7:81777851-81777870 None:intergenic 20.0%
!! TTTCATTTGTGTTAACAAAA+AGG + Chr7:81781480-81781499 None:intergenic 20.0%
!! TTTCTCTTAAAATGAAATAG+CGG - Chr7:81776587-81776606 MsG0780040734.01.T01:CDS 20.0%
!!! ATTTTATCCATAATTTCTCT+GGG + Chr7:81779352-81779371 None:intergenic 20.0%
!!! ATTTTCTATTGAACAACAAA+AGG - Chr7:81775651-81775670 MsG0780040734.01.T01:CDS 20.0%
!!! GTGATTTTATGCTTTATTAT+TGG + Chr7:81779685-81779704 None:intergenic 20.0%
!!! TAAAGTTTAGTTCTGTTATT+TGG - Chr7:81778259-81778278 MsG0780040734.01.T01:intron 20.0%
!!! TAATATTTTGAGCATACAAA+TGG + Chr7:81778823-81778842 None:intergenic 20.0%
!!! TATGTTTTGGATGAATTAAT+TGG - Chr7:81778358-81778377 MsG0780040734.01.T01:intron 20.0%
!!! TGATTTATAAGAAGGTATTT+CGG + Chr7:81777755-81777774 None:intergenic 20.0%
!!! TTCTATTTTTGTTTGTATAC+TGG - Chr7:81781379-81781398 MsG0780040734.01.T01:five_prime_UTR 20.0%
!!! TTTCAATTTTCAGTTACTAT+GGG - Chr7:81780160-81780179 MsG0780040734.01.T01:intron 20.0%
!!! TTTTTGTAAAATAAAAGGCA+AGG + Chr7:81777930-81777949 None:intergenic 20.0%
! AAAAAAGAAGGTAAAAAAGC+AGG + Chr7:81780561-81780580 None:intergenic 25.0%
! AACTAGAACAAAAAAGTAAC+AGG - Chr7:81776381-81776400 MsG0780040734.01.T01:intron 25.0%
! AACTGGAAACATGATAAAAA+GGG - Chr7:81781215-81781234 MsG0780040734.01.T01:five_prime_UTR 25.0%
! AATAAATGCGTAAACAGATT+AGG - Chr7:81778570-81778589 MsG0780040734.01.T01:intron 25.0%
! AATATGGAAAATAGTACATG+AGG + Chr7:81778422-81778441 None:intergenic 25.0%
! ACACTATTGTAAAAATGAGA+AGG - Chr7:81779779-81779798 MsG0780040734.01.T01:intron 25.0%
! ACCAAGAATATAAGTTGTTA+AGG - Chr7:81778605-81778624 MsG0780040734.01.T01:intron 25.0%
! ACGTTATTCAACTTCTTTAT+AGG - Chr7:81781324-81781343 MsG0780040734.01.T01:five_prime_UTR 25.0%
! ACTATTGTAAAAATGAGAAG+GGG - Chr7:81779781-81779800 MsG0780040734.01.T01:intron 25.0%
! AGAAAATACAAAATTGTCCT+TGG + Chr7:81776572-81776591 None:intergenic 25.0%
! AGGAATTATAAGAAAGTAAG+TGG + Chr7:81780922-81780941 None:intergenic 25.0%
! AGTAGCCATTATAAAAAAGA+AGG + Chr7:81780573-81780592 None:intergenic 25.0%
! ATCAAATAAATGAGAACTAG+AGG + Chr7:81775633-81775652 None:intergenic 25.0%
! ATTAATGCAACAATCATAAG+AGG + Chr7:81778866-81778885 None:intergenic 25.0%
! CAAACACTACAAATACAAAA+AGG - Chr7:81777018-81777037 MsG0780040734.01.T01:intron 25.0%
! CAATTAGATAAGAAGAGATA+AGG + Chr7:81775720-81775739 None:intergenic 25.0%
! CACTATTGTAAAAATGAGAA+GGG - Chr7:81779780-81779799 MsG0780040734.01.T01:intron 25.0%
! CCAAGAATATAAGTTGTTAA+GGG - Chr7:81778606-81778625 MsG0780040734.01.T01:intron 25.0%
! CTATTCAACTACTAGATTAA+AGG + Chr7:81779927-81779946 None:intergenic 25.0%
! CTGTATGATCTTTATAAATC+TGG - Chr7:81781291-81781310 MsG0780040734.01.T01:five_prime_UTR 25.0%
! GATCTGAAAACAATAACAAT+GGG + Chr7:81778987-81779006 None:intergenic 25.0%
! GGAAAAAATATGTCAAATAC+AGG - Chr7:81781176-81781195 MsG0780040734.01.T01:five_prime_UTR 25.0%
! GGATATATTTATTAATTGGC+CGG - Chr7:81779309-81779328 MsG0780040734.01.T01:intron 25.0%
! TAAAGAAGTTGAATAACGTA+AGG + Chr7:81781323-81781342 None:intergenic 25.0%
! TAATGAGTTATGTTGTGAAA+AGG - Chr7:81777310-81777329 MsG0780040734.01.T01:intron 25.0%
! TACTCATTGCAATATATCTT+AGG - Chr7:81780589-81780608 MsG0780040734.01.T01:intron 25.0%
! TAGAAATCTTATCTCTTGTT+TGG - Chr7:81777714-81777733 MsG0780040734.01.T01:intron 25.0%
! TATTTGGATGAAATTTAGAC+AGG - Chr7:81778275-81778294 MsG0780040734.01.T01:intron 25.0%
! TCAAATACAGGAAAAAGAAA+AGG - Chr7:81781188-81781207 MsG0780040734.01.T01:five_prime_UTR 25.0%
! TGATAGAATTAATTACCTCT+TGG + Chr7:81780875-81780894 None:intergenic 25.0%
! TGATCTGAAAACAATAACAA+TGG + Chr7:81778988-81779007 None:intergenic 25.0%
! TGTTGTACAAACAAATAAAG+AGG + Chr7:81780902-81780921 None:intergenic 25.0%
! TTGAATATAGTAGAAGCAAA+AGG + Chr7:81779632-81779651 None:intergenic 25.0%
!! AAGAGAAAATACTGAAGTTT+TGG + Chr7:81780288-81780307 None:intergenic 25.0%
!! AGAAATCTTATCTCTTGTTT+GGG - Chr7:81777715-81777734 MsG0780040734.01.T01:intron 25.0%
!! ATGTACTATTTTCCATATTC+TGG - Chr7:81778423-81778442 MsG0780040734.01.T01:intron 25.0%
!! CACTTGAGAAAAATAGATTT+TGG - Chr7:81776914-81776933 MsG0780040734.01.T01:intron 25.0%
!! CTTTCAATTTTCAGTTACTA+TGG - Chr7:81780159-81780178 MsG0780040734.01.T01:intron 25.0%
!! GATTTTATCCATAATTTCTC+TGG + Chr7:81779353-81779372 None:intergenic 25.0%
!! GTTTTATATGAACAAAACAG+AGG - Chr7:81776288-81776307 MsG0780040734.01.T01:intron 25.0%
!! TATGCTTTATTATTGGGATT+TGG + Chr7:81779678-81779697 None:intergenic 25.0%
!! TCTTGATTTTCTTCTTAACA+TGG + Chr7:81778775-81778794 None:intergenic 25.0%
!! TGAAATAGCTTTTCATTTTG+AGG - Chr7:81776947-81776966 MsG0780040734.01.T01:intron 25.0%
!!! CAAGTTTTGTTTTTGTTTGT+GGG - Chr7:81780115-81780134 MsG0780040734.01.T01:intron 25.0%
!!! CTCATTTTTACAATAGTGTA+GGG + Chr7:81779778-81779797 None:intergenic 25.0%
!!! CTTATTTCTATTTAGTCAAG+AGG - Chr7:81779997-81780016 MsG0780040734.01.T01:intron 25.0%
!!! CTTGTTTTAGTGAAAATAAG+TGG - Chr7:81775995-81776014 MsG0780040734.01.T01:CDS 25.0%
!!! TCTCATTTTTACAATAGTGT+AGG + Chr7:81779779-81779798 None:intergenic 25.0%
!!! TGTTTTTGTTTCTTCATCAT+TGG + Chr7:81780834-81780853 None:intergenic 25.0%
!!! TTATTTTAAATTTGGGGTGT+TGG - Chr7:81780506-81780525 MsG0780040734.01.T01:intron 25.0%
AACTAATGCACGAAATAGAT+GGG - Chr7:81781436-81781455 MsG0780040734.01.T01:five_prime_UTR 30.0%
AAGAAGAGAAACACTGTATA+AGG - Chr7:81777596-81777615 MsG0780040734.01.T01:intron 30.0%
AAGAGAACATAACAATAAGC+AGG - Chr7:81780225-81780244 MsG0780040734.01.T01:intron 30.0%
AAGGTAATCTTTGATTCTTG+AGG + Chr7:81780797-81780816 None:intergenic 30.0%
AAGTAAGTGGTACGTATATA+AGG + Chr7:81780942-81780961 None:intergenic 30.0%
AATACAGGAAAAAGAAAAGG+AGG - Chr7:81781191-81781210 MsG0780040734.01.T01:five_prime_UTR 30.0%
AATAGGGAAAACGAAATTGA+AGG - Chr7:81775677-81775696 MsG0780040734.01.T01:CDS 30.0%
AATGAGTCATAAGGTTCAAA+AGG + Chr7:81779550-81779569 None:intergenic 30.0%
ACTATTAGTAATGTGGCAAA+TGG - Chr7:81779512-81779531 MsG0780040734.01.T01:intron 30.0%
AGAAGAGAAACACTGTATAA+GGG - Chr7:81777597-81777616 MsG0780040734.01.T01:intron 30.0%
AGGTAATCTTTGATTCTTGA+GGG + Chr7:81780796-81780815 None:intergenic 30.0%
ATCTTACTAGCATTAAACTG+AGG - Chr7:81776059-81776078 MsG0780040734.01.T01:intron 30.0%
ATGAGTCATAAGGTTCAAAA+GGG + Chr7:81779549-81779568 None:intergenic 30.0%
ATTGAATTACTTCATGAGCA+TGG - Chr7:81777256-81777275 MsG0780040734.01.T01:intron 30.0%
CAACTGGAAACATGATAAAA+AGG - Chr7:81781214-81781233 MsG0780040734.01.T01:five_prime_UTR 30.0%
CAAGATAGAAGTTCAAAAGA+TGG + Chr7:81779600-81779619 None:intergenic 30.0%
CAATAAGCAGGAAAATGAAA+TGG - Chr7:81780237-81780256 MsG0780040734.01.T01:intron 30.0%
CAATAGAGTGATAGAAATTG+AGG - Chr7:81778188-81778207 MsG0780040734.01.T01:intron 30.0%
CAATATTCCCAGAGAAATTA+TGG - Chr7:81779342-81779361 MsG0780040734.01.T01:intron 30.0%
CCACAAACAAAAACAAAACT+TGG + Chr7:81780117-81780136 None:intergenic 30.0%
CCCTTAACAACTTATATTCT+TGG + Chr7:81778609-81778628 None:intergenic 30.0%
CTATCCGCTATTAACTAATA+TGG + Chr7:81776167-81776186 None:intergenic 30.0%
CTATTGTAAAAATGAGAAGG+GGG - Chr7:81779782-81779801 MsG0780040734.01.T01:intron 30.0%
GATGAAGAAACAAAAACAGA+GGG - Chr7:81780836-81780855 MsG0780040734.01.T01:intron 30.0%
GTACAAACAAATAAAGAGGA+GGG + Chr7:81780898-81780917 None:intergenic 30.0%
GTTGCCATATTAGTTAATAG+CGG - Chr7:81776160-81776179 MsG0780040734.01.T01:intron 30.0%
GTTTAACAATCTCAAAACTC+TGG + Chr7:81776410-81776429 None:intergenic 30.0%
GTTTATTCAAATTCCAACAG+TGG - Chr7:81779255-81779274 MsG0780040734.01.T01:intron 30.0%
TAAAGTTGGGAAATGTAACA+CGG + Chr7:81778110-81778129 None:intergenic 30.0%
TATAAGGGAAGATGTAATCA+AGG - Chr7:81777612-81777631 MsG0780040734.01.T01:intron 30.0%
TATCGTGTTCTATTTGCAAA+TGG - Chr7:81780714-81780733 MsG0780040734.01.T01:intron 30.0%
TCAAAGATTACCTTTAAGTG+TGG - Chr7:81780803-81780822 MsG0780040734.01.T01:intron 30.0%
TCCATAACAGAGTTATTCAT+CGG + Chr7:81779035-81779054 None:intergenic 30.0%
TGATGAAGAAACAAAAACAG+AGG - Chr7:81780835-81780854 MsG0780040734.01.T01:intron 30.0%
TGCTTATTGTTATGTTCTCT+TGG + Chr7:81780226-81780245 None:intergenic 30.0%
TGGTTTAAGCTTGTAACTAA+AGG - Chr7:81779275-81779294 MsG0780040734.01.T01:intron 30.0%
TGTACAAACAAATAAAGAGG+AGG + Chr7:81780899-81780918 None:intergenic 30.0%
TGTTGCATTAATGTTAGTGT+TGG - Chr7:81778874-81778893 MsG0780040734.01.T01:intron 30.0%
TGTTGTATGTATCTATCACA+TGG - Chr7:81779947-81779966 MsG0780040734.01.T01:intron 30.0%
TTAGACTGTATCTGATGATT+AGG - Chr7:81778909-81778928 MsG0780040734.01.T01:intron 30.0%
TTATTGTTATGTTCTCTTGG+AGG + Chr7:81780223-81780242 None:intergenic 30.0%
TTCTATTGAACAACAAAAGG+AGG - Chr7:81775654-81775673 MsG0780040734.01.T01:CDS 30.0%
! AAATAAGTGGTTTGAGACTT+AGG - Chr7:81776008-81776027 MsG0780040734.01.T01:CDS 30.0%
! ACTATTTTCCATATTCTGGA+TGG - Chr7:81778427-81778446 MsG0780040734.01.T01:intron 30.0%
! AGTGAAGGTCGATTTAAAAA+TGG - Chr7:81781098-81781117 MsG0780040734.01.T01:intron 30.0%
! ATAGGTCACTATTAGTTTAG+TGG - Chr7:81779419-81779438 MsG0780040734.01.T01:intron 30.0%
! ATTCGCATTTTTATCATGCT+GGG - Chr7:81777130-81777149 MsG0780040734.01.T01:intron 30.0%
! CATAATTTCTCTGGGAATAT+TGG + Chr7:81779344-81779363 None:intergenic 30.0%
! GAACCTTATGACTCATTTTA+GGG - Chr7:81779553-81779572 MsG0780040734.01.T01:intron 30.0%
! GGAAAATTCTAAAAACTGAC+TGG + Chr7:81779657-81779676 None:intergenic 30.0%
! GTAAATTTTCCTCTACTTTG+TGG + Chr7:81776462-81776481 None:intergenic 30.0%
! TATTCGCATTTTTATCATGC+TGG - Chr7:81777129-81777148 MsG0780040734.01.T01:intron 30.0%
! TGAACCTTATGACTCATTTT+AGG - Chr7:81779552-81779571 MsG0780040734.01.T01:intron 30.0%
! TTGGTTTCACTGATCAATTT+TGG + Chr7:81775403-81775422 None:intergenic 30.0%
! TTTTTGAACTACTTCGAGAT+AGG - Chr7:81779155-81779174 MsG0780040734.01.T01:intron 30.0%
!! ATAAGAAGGTATTTCGGTAT+TGG + Chr7:81777749-81777768 None:intergenic 30.0%
!! GGCACATTATTTCACTTTTA+GGG - Chr7:81779877-81779896 MsG0780040734.01.T01:intron 30.0%
!! TAAGAAGGTATTTCGGTATT+GGG + Chr7:81777748-81777767 None:intergenic 30.0%
!! TGGCACATTATTTCACTTTT+AGG - Chr7:81779876-81779895 MsG0780040734.01.T01:intron 30.0%
!!! CCAAGTTTTGTTTTTGTTTG+TGG - Chr7:81780114-81780133 MsG0780040734.01.T01:intron 30.0%
!!! GGTTTTAAATAGACGAAGAA+TGG - Chr7:81778379-81778398 MsG0780040734.01.T01:intron 30.0%
!!! TTTTTGCCATTTTTATGGTC+AGG - Chr7:81777490-81777509 MsG0780040734.01.T01:intron 30.0%
AAACAATAACAATGGGAGTG+AGG + Chr7:81778980-81778999 None:intergenic 35.0%
AAACACATCAGAAGAGCAAA+TGG + Chr7:81780087-81780106 None:intergenic 35.0%
AAACATGATAAAAAGGGTGG+TGG - Chr7:81781221-81781240 MsG0780040734.01.T01:five_prime_UTR 35.0%
AACACGTACACATAGGTAAA+AGG - Chr7:81779007-81779026 MsG0780040734.01.T01:intron 35.0%
AACATAAGGAAAAAACGTGC+TGG - Chr7:81777532-81777551 MsG0780040734.01.T01:intron 35.0%
AAGGTAGCTCAAGTTTACTT+GGG + Chr7:81779226-81779245 None:intergenic 35.0%
AATGAGAACTAGAGGATAGA+TGG + Chr7:81775625-81775644 None:intergenic 35.0%
AATGGACATCAGGAAGATTA+TGG - Chr7:81780255-81780274 MsG0780040734.01.T01:intron 35.0%
ACAGGTTAATAGACGAACAA+TGG - Chr7:81778454-81778473 MsG0780040734.01.T01:intron 35.0%
ACATAAGGAAAAAACGTGCT+GGG - Chr7:81777533-81777552 MsG0780040734.01.T01:intron 35.0%
ACGCACCCATAATAATCAAA+TGG + Chr7:81776766-81776785 None:intergenic 35.0%
ACTAATGCACGAAATAGATG+GGG - Chr7:81781437-81781456 MsG0780040734.01.T01:five_prime_UTR 35.0%
ACTGGTCACTATTAGTAATG+TGG - Chr7:81779505-81779524 MsG0780040734.01.T01:intron 35.0%
AGAAGATAGACAACATTCAG+TGG + Chr7:81780336-81780355 None:intergenic 35.0%
AGACCCTAAAATGAGTCATA+AGG + Chr7:81779559-81779578 None:intergenic 35.0%
AGGAAAATGAAATGGACATC+AGG - Chr7:81780245-81780264 MsG0780040734.01.T01:intron 35.0%
AGTTCTTACATAGGTTCGAT+CGG + Chr7:81778147-81778166 None:intergenic 35.0%
ATAGTAGAAGCAAAAGGCAA+AGG + Chr7:81779626-81779645 None:intergenic 35.0%
ATGGTTTGAATTGGAGTTGA+TGG - Chr7:81779456-81779475 MsG0780040734.01.T01:intron 35.0%
ATTCCTTCCTATAGGCTTAT+TGG + Chr7:81777221-81777240 None:intergenic 35.0%
ATTGAAAGAGAGAAGACGTA+AGG + Chr7:81780147-81780166 None:intergenic 35.0%
CAAAAAGGTTGAAGATAGGA+AGG - Chr7:81780639-81780658 MsG0780040734.01.T01:intron 35.0%
CACCAAACGTCAAAAAAAGA+AGG + Chr7:81781412-81781431 None:intergenic 35.0%
CTATTGTAAGCAATGTAGTC+AGG + Chr7:81778174-81778193 None:intergenic 35.0%
GAACAACAAAAGGAGGAATA+GGG - Chr7:81775661-81775680 MsG0780040734.01.T01:CDS 35.0%
GAACTAATGCACGAAATAGA+TGG - Chr7:81781435-81781454 MsG0780040734.01.T01:five_prime_UTR 35.0%
GGTAATCTTTGATTCTTGAG+GGG + Chr7:81780795-81780814 None:intergenic 35.0%
GGTACAGTAATGGTTTGAAT+TGG - Chr7:81779447-81779466 MsG0780040734.01.T01:intron 35.0%
GGTACTTATCAGATGAAGAA+TGG - Chr7:81778296-81778315 MsG0780040734.01.T01:intron 35.0%
TAACTAAAGGCTGAAATTGC+TGG - Chr7:81779288-81779307 MsG0780040734.01.T01:intron 35.0%
TAAGGTAGCTCAAGTTTACT+TGG + Chr7:81779227-81779246 None:intergenic 35.0%
TACAAGAAGAAACAAGCTCA+CGG - Chr7:81780190-81780209 MsG0780040734.01.T01:intron 35.0%
TAGAGGAAAATTTACAGCAG+AGG - Chr7:81776467-81776486 MsG0780040734.01.T01:intron 35.0%
TATCCAACTTATTCACCTGT+CGG + Chr7:81778734-81778753 None:intergenic 35.0%
TATTATGGGTGCGTTTGTTT+CGG - Chr7:81776772-81776791 MsG0780040734.01.T01:intron 35.0%
TCAAAAGACAAATGCGACTT+GGG + Chr7:81778640-81778659 None:intergenic 35.0%
TCTTCTTAACATGGATAAGC+CGG + Chr7:81778766-81778785 None:intergenic 35.0%
TGAACAACAAAAGGAGGAAT+AGG - Chr7:81775660-81775679 MsG0780040734.01.T01:CDS 35.0%
TGAAGTCAATTCCTTCCTAT+AGG + Chr7:81777229-81777248 None:intergenic 35.0%
TGAATAAGAGCAGATGAACA+CGG + Chr7:81780771-81780790 None:intergenic 35.0%
TGGAAAATAGTACATGAGGT+AGG + Chr7:81778418-81778437 None:intergenic 35.0%
TGGAAACATGATAAAAAGGG+TGG - Chr7:81781218-81781237 MsG0780040734.01.T01:five_prime_UTR 35.0%
TTAAATGTGAGCAGAAGAGT+CGG - Chr7:81778682-81778701 MsG0780040734.01.T01:intron 35.0%
TTACAAGCTTAAACCACTGT+TGG + Chr7:81779271-81779290 None:intergenic 35.0%
TTGAAAGAGAGAAGACGTAA+GGG + Chr7:81780146-81780165 None:intergenic 35.0%
! ACTATTAGTTTAGTGGTGGA+TGG - Chr7:81779426-81779445 MsG0780040734.01.T01:intron 35.0%
! AGAGGTTTGAAGTTAAGTGA+AGG - Chr7:81781083-81781102 MsG0780040734.01.T01:intron 35.0%
! TATCCCGCTATAGCATTTTT+GGG + Chr7:81776194-81776213 None:intergenic 35.0%
! TTACAACTTTTCCCTTGAGT+GGG - Chr7:81778074-81778093 MsG0780040734.01.T01:intron 35.0%
!! GAAAAGGATTAGCTCAACTT+AGG - Chr7:81777326-81777345 MsG0780040734.01.T01:intron 35.0%
!! GGATTGTTTAGCTCTAAAGA+AGG - Chr7:81777347-81777366 MsG0780040734.01.T01:intron 35.0%
!!! GACCTTCTTTTTTTGACGTT+TGG - Chr7:81781407-81781426 MsG0780040734.01.T01:five_prime_UTR 35.0%
!!! GGTCGTTTTTGCCATTTTTA+TGG - Chr7:81777485-81777504 MsG0780040734.01.T01:intron 35.0%
!!! GTATGATTCTAGGACGTTTT+GGG - Chr7:81781003-81781022 MsG0780040734.01.T01:intron 35.0%
!!! TATGATTCTAGGACGTTTTG+GGG - Chr7:81781004-81781023 MsG0780040734.01.T01:intron 35.0%
AACTTATTCACCTGTCGGTA+AGG + Chr7:81778729-81778748 None:intergenic 40.0%
ACTAGAGGATAGATGGATGT+TGG + Chr7:81775618-81775637 None:intergenic 40.0%
ACTAGCATTAAACTGAGGAG+AGG - Chr7:81776064-81776083 MsG0780040734.01.T01:intron 40.0%
AGCGCAAAAAGGTTGAAGAT+AGG - Chr7:81780635-81780654 MsG0780040734.01.T01:intron 40.0%
AGGATAGATGGATGTTGGAT+TGG + Chr7:81775613-81775632 None:intergenic 40.0%
ATCTTACAATCAAGGTAGCC+AGG - Chr7:81777389-81777408 MsG0780040734.01.T01:intron 40.0%
CATGAGCATGGTATGATAGT+AGG - Chr7:81777268-81777287 MsG0780040734.01.T01:intron 40.0%
CCAAGTATTTCGACATCGAT+CGG + Chr7:81779859-81779878 None:intergenic 40.0%
CTACAATCTACAGACCCTAT+GGG + Chr7:81777077-81777096 None:intergenic 40.0%
CTCGATCCTGACCATAAAAA+TGG + Chr7:81777499-81777518 None:intergenic 40.0%
CTGTCAATCCATCCAGAATA+TGG + Chr7:81778438-81778457 None:intergenic 40.0%
GAAAAAGAAAAGGAGGCAAC+TGG - Chr7:81781198-81781217 MsG0780040734.01.T01:five_prime_UTR 40.0%
GAAGAAACAAAAACAGAGGG+AGG - Chr7:81780839-81780858 MsG0780040734.01.T01:intron 40.0%
GAAGAGGACTCAGTCAAATT+AGG - Chr7:81777682-81777701 MsG0780040734.01.T01:intron 40.0%
GCACAAGTGGTACGTATATA+AGG + Chr7:81780975-81780994 None:intergenic 40.0%
GCCGATGAATAACTCTGTTA+TGG - Chr7:81779031-81779050 MsG0780040734.01.T01:intron 40.0%
GTCAAAAGACAAATGCGACT+TGG + Chr7:81778641-81778660 None:intergenic 40.0%
GTCGTAGTACATGTATGAAG+AGG - Chr7:81780034-81780053 MsG0780040734.01.T01:intron 40.0%
GTCTGCTTCCATTAGTAGAA+TGG - Chr7:81776136-81776155 MsG0780040734.01.T01:intron 40.0%
GTGAGGTCTACTTATTTCAG+TGG + Chr7:81778963-81778982 None:intergenic 40.0%
GTTAGCTACGTTGTGAATTG+CGG + Chr7:81775832-81775851 None:intergenic 40.0%
GTTTCTGCAGCAGAAACATA+AGG - Chr7:81777518-81777537 MsG0780040734.01.T01:intron 40.0%
TCAATGCTCTCTCTTTCTCT+AGG + Chr7:81775354-81775373 None:intergenic 40.0%
TCAGATCAACACGTACACAT+AGG - Chr7:81779000-81779019 MsG0780040734.01.T01:intron 40.0%
TCAGGAACGAGTTCTTACAT+AGG + Chr7:81778156-81778175 None:intergenic 40.0%
TCCTAGAATCATACGCTGAA+AGG + Chr7:81780997-81781016 None:intergenic 40.0%
TCTACAATCTACAGACCCTA+TGG + Chr7:81777078-81777097 None:intergenic 40.0%
TGAAAGAGAGAAGACGTAAG+GGG + Chr7:81780145-81780164 None:intergenic 40.0%
TTACCGACAGGTGAATAAGT+TGG - Chr7:81778728-81778747 MsG0780040734.01.T01:intron 40.0%
TTATAGCAAACTCGCGTTTG+AGG - Chr7:81775462-81775481 MsG0780040734.01.T01:three_prime_UTR 40.0%
TTGTTGAAGTGTGTGTACTG+TGG + Chr7:81776115-81776134 None:intergenic 40.0%
TTTATTACAGCCTTACCGAC+AGG - Chr7:81778716-81778735 MsG0780040734.01.T01:intron 40.0%
! AACACAGGCAGTGATGATTT+TGG + Chr7:81775422-81775441 None:intergenic 40.0%
! AGAGAGAGCATAATGGAGTT+TGG - Chr7:81776339-81776358 MsG0780040734.01.T01:intron 40.0%
! ATAGATGGATGTTGGATTGG+TGG + Chr7:81775610-81775629 None:intergenic 40.0%
! ATCCCGCTATAGCATTTTTG+GGG + Chr7:81776193-81776212 None:intergenic 40.0%
! CAGAAACAGAGAGAGCATAA+TGG - Chr7:81776332-81776351 MsG0780040734.01.T01:intron 40.0%
! CTATCCCGCTATAGCATTTT+TGG + Chr7:81776195-81776214 None:intergenic 40.0%
! GAGAGGTGAGTTTTTCTGAT+TGG - Chr7:81776081-81776100 MsG0780040734.01.T01:intron 40.0%
! GGTCACTATTAGTTTAGTGG+TGG - Chr7:81779422-81779441 MsG0780040734.01.T01:intron 40.0%
! GGTTTGAGACTTAGGTTAGA+TGG - Chr7:81776016-81776035 MsG0780040734.01.T01:CDS 40.0%
! GTTACAACTTTTCCCTTGAG+TGG - Chr7:81778073-81778092 MsG0780040734.01.T01:intron 40.0%
! TAAAAAGGGTGGTGGTAAGA+AGG - Chr7:81781229-81781248 MsG0780040734.01.T01:five_prime_UTR 40.0%
! TTATCTCTTGTTTGGGCCTA+AGG - Chr7:81777722-81777741 MsG0780040734.01.T01:intron 40.0%
!! AGAGAAAGAGAGAGCATTGA+AGG - Chr7:81775354-81775373 MsG0780040734.01.T01:three_prime_UTR 40.0%
!! CATATTCTGGATGGATTGAC+AGG - Chr7:81778436-81778455 MsG0780040734.01.T01:intron 40.0%
!! GTTTGAATTGGAGTTGATGG+TGG - Chr7:81779459-81779478 MsG0780040734.01.T01:intron 40.0%
!!! ATGATTCTAGGACGTTTTGG+GGG - Chr7:81781005-81781024 MsG0780040734.01.T01:intron 40.0%
!!! CGTATGATTCTAGGACGTTT+TGG - Chr7:81781002-81781021 MsG0780040734.01.T01:intron 40.0%
!!! CTTGTTTTCTGTTTCTGCTG+CGG - Chr7:81777645-81777664 MsG0780040734.01.T01:intron 40.0%
!!! TCTTTTATTTTGACCCGACC+TGG + Chr7:81777568-81777587 None:intergenic 40.0%
AAACACAAACCAGAGGACAG+AGG - Chr7:81781065-81781084 MsG0780040734.01.T01:intron 45.0%
AACTTCAAACCTCTGTCCTC+TGG + Chr7:81781077-81781096 None:intergenic 45.0%
AAGTTGGATATCCTCACGTC+CGG - Chr7:81778744-81778763 MsG0780040734.01.T01:intron 45.0%
ACAGAACAGCTGAAAAGCAG+AGG - Chr7:81776502-81776521 MsG0780040734.01.T01:intron 45.0%
ACGCCCATAGTAGTCAATAG+CGG + Chr7:81776713-81776732 None:intergenic 45.0%
AGCAGCAGTAAAAAACCAGC+TGG - Chr7:81781041-81781060 MsG0780040734.01.T01:intron 45.0%
AGCCCCAAAAATGCTATAGC+GGG - Chr7:81776188-81776207 MsG0780040734.01.T01:CDS 45.0%
AGCTGGAAAACACAAACCAG+AGG - Chr7:81781058-81781077 MsG0780040734.01.T01:intron 45.0%
ATCCTCCAATGCAACAACAC+AGG + Chr7:81775437-81775456 None:intergenic 45.0%
ATTGGTCGTGCCACACTTAA+AGG + Chr7:81780816-81780835 None:intergenic 45.0%
CAGCCCCAAAAATGCTATAG+CGG - Chr7:81776187-81776206 MsG0780040734.01.T01:CDS 45.0%
CCGATCGATGTCGAAATACT+TGG - Chr7:81779856-81779875 MsG0780040734.01.T01:intron 45.0%
GCCTTTCAGCGTATGATTCT+AGG - Chr7:81780993-81781012 MsG0780040734.01.T01:intron 45.0%
GGAGGAAAAAATGCTCCAAG+AGG - Chr7:81780857-81780876 MsG0780040734.01.T01:intron 45.0%
GTTCGTAAGAACCCACTCAA+GGG + Chr7:81778088-81778107 None:intergenic 45.0%
TAGCAAACGCCACAAAGTAG+AGG - Chr7:81776450-81776469 MsG0780040734.01.T01:intron 45.0%
TAGGCAACTCGCATATGACA+TGG - Chr7:81780608-81780627 MsG0780040734.01.T01:intron 45.0%
TGGCAACGCCATTCTACTAA+TGG + Chr7:81776147-81776166 None:intergenic 45.0%
TGGTGAAGGGACGTAAAGTT+GGG + Chr7:81778123-81778142 None:intergenic 45.0%
TTGAAGTCAACACCCACAAG+AGG - Chr7:81781143-81781162 MsG0780040734.01.T01:intron 45.0%
! ATCAAGGTCGTAGCTCGTTT+TGG + Chr7:81777462-81777481 None:intergenic 45.0%
! GACATGGAAAGAGCGCAAAA+AGG - Chr7:81780624-81780643 MsG0780040734.01.T01:intron 45.0%
! GATAGGAAGGTTGTTTCCCT+TGG - Chr7:81780652-81780671 MsG0780040734.01.T01:intron 45.0%
! GCGGTTGATGTTAGAGTGAT+AGG - Chr7:81779401-81779420 MsG0780040734.01.T01:intron 45.0%
! GTATTTCGGTATTGGGCCTT+AGG + Chr7:81777741-81777760 None:intergenic 45.0%
!! AGTGGTGGATGGTACAGTAA+TGG - Chr7:81779437-81779456 MsG0780040734.01.T01:intron 45.0%
!! GAGTTGATGGTGGTTGAATG+TGG - Chr7:81779469-81779488 MsG0780040734.01.T01:intron 45.0%
!! TCTGGTTTGTGTTTTCCAGC+TGG + Chr7:81781059-81781078 None:intergenic 45.0%
!! TGATGGTGGTTGAATGTGGT+TGG - Chr7:81779473-81779492 MsG0780040734.01.T01:intron 45.0%
!! TGTCAACTGCTGATTCTGAC+AGG - Chr7:81778513-81778532 MsG0780040734.01.T01:intron 45.0%
!! TGTGGTTGGTGTTGAGTAAC+TGG - Chr7:81779487-81779506 MsG0780040734.01.T01:intron 45.0%
!! AAATAAAAAAAAAAAAAACA+AGG + Chr7:81776545-81776564 None:intergenic 5.0%
!! AATAAAAAAAAAAAAAACAA+GGG + Chr7:81776544-81776563 None:intergenic 5.0%
!! ATTATTAAAATCAAAATTAT+TGG - Chr7:81775939-81775958 MsG0780040734.01.T01:intron 5.0%
AACGAGCTACGACCTTGATC+TGG - Chr7:81777463-81777482 MsG0780040734.01.T01:intron 50.0%
AAGAAACAAGCTCACGGACG+TGG - Chr7:81780196-81780215 MsG0780040734.01.T01:intron 50.0%
ACGAGCTACGACCTTGATCT+GGG - Chr7:81777464-81777483 MsG0780040734.01.T01:intron 50.0%
CCAAAACAAACGGGCCCATA+GGG - Chr7:81777060-81777079 MsG0780040734.01.T01:intron 50.0%
CCAGTGTCATGACCTCTTGT+GGG + Chr7:81781158-81781177 None:intergenic 50.0%
CGGCCAATAAGCCTATAGGA+AGG - Chr7:81777215-81777234 MsG0780040734.01.T01:intron 50.0%
CTGAGAGATGGAGGTTGGAA+GGG + Chr7:81775562-81775581 None:intergenic 50.0%
CTGGTGAAGGGACGTAAAGT+TGG + Chr7:81778124-81778143 None:intergenic 50.0%
CTTACATAGGTTCGATCGGC+TGG + Chr7:81778143-81778162 None:intergenic 50.0%
GGCAAAAACGACCCAGATCA+AGG + Chr7:81777478-81777497 None:intergenic 50.0%
GGTTCGTAAGAACCCACTCA+AGG + Chr7:81778089-81778108 None:intergenic 50.0%
TATCTCACACCGCAACGCTA+TGG - Chr7:81776647-81776666 MsG0780040734.01.T01:CDS 50.0%
TCCAAAACAAACGGGCCCAT+AGG - Chr7:81777059-81777078 MsG0780040734.01.T01:intron 50.0%
TCCAGTGTCATGACCTCTTG+TGG + Chr7:81781159-81781178 None:intergenic 50.0%
TGAGAGATGGAGGTTGGAAG+GGG + Chr7:81775561-81775580 None:intergenic 50.0%
TGTGAGCAGAAGAGTCGGAA+AGG - Chr7:81778687-81778706 MsG0780040734.01.T01:intron 50.0%
! AACGCTTCGTAGCGGTTTTG+CGG + Chr7:81776620-81776639 None:intergenic 50.0%
! AAGGTCGTAGCTCGTTTTGG+TGG + Chr7:81777459-81777478 None:intergenic 50.0%
! AGGAAGGTTGTTTCCCTTGG+TGG - Chr7:81780655-81780674 MsG0780040734.01.T01:intron 50.0%
! CACTGCCTGTGTTGTTGCAT+TGG - Chr7:81775429-81775448 MsG0780040734.01.T01:three_prime_UTR 50.0%
! CAGAAGAGTCGGAAAGGTAC+TGG - Chr7:81778693-81778712 MsG0780040734.01.T01:intron 50.0%
! CATACGCTGAAAGGCACAAG+TGG + Chr7:81780988-81781007 None:intergenic 50.0%
! CGGCCGCTATTGACTACTAT+GGG - Chr7:81776707-81776726 MsG0780040734.01.T01:intron 50.0%
! GGAAGGTTGTTTCCCTTGGT+GGG - Chr7:81780656-81780675 MsG0780040734.01.T01:intron 50.0%
! TACTATGGGCGTTGCAGCTT+CGG - Chr7:81776721-81776740 MsG0780040734.01.T01:intron 50.0%
! TGCCTGTGTTGTTGCATTGG+AGG - Chr7:81775432-81775451 MsG0780040734.01.T01:three_prime_UTR 50.0%
!! AGGTCGTAGCTCGTTTTGGT+GGG + Chr7:81777458-81777477 None:intergenic 50.0%
!! GATGGATGTTGGATTGGTGG+TGG + Chr7:81775607-81775626 None:intergenic 50.0%
!!! TCTAGGACGTTTTGGGGGAA+AGG - Chr7:81781010-81781029 MsG0780040734.01.T01:intron 50.0%
ACATGGATAAGCCGGACGTG+AGG + Chr7:81778758-81778777 None:intergenic 55.0%
AGACCTCACCTTCCCACCAA+GGG + Chr7:81780671-81780690 None:intergenic 55.0%
AGCGTTGCGGTGTGAGATAG+CGG + Chr7:81776646-81776665 None:intergenic 55.0%
AGGTTCGATCGGCTGGTGAA+GGG + Chr7:81778136-81778155 None:intergenic 55.0%
ATCGTGCGATCCTACGTGCT+GGG + Chr7:81777422-81777441 None:intergenic 55.0%
CCCACAAGAGGTCATGACAC+TGG - Chr7:81781155-81781174 MsG0780040734.01.T01:five_prime_UTR 55.0%
CGCAACAAGCCATAGCGTTG+CGG + Chr7:81776659-81776678 None:intergenic 55.0%
CTGAGTCCTCTTCTTCCCCA+TGG + Chr7:81777675-81777694 None:intergenic 55.0%
CTGGGCTCTACAAACCAGGT+CGG - Chr7:81777551-81777570 MsG0780040734.01.T01:intron 55.0%
GCTGAGAGATGGAGGTTGGA+AGG + Chr7:81775563-81775582 None:intergenic 55.0%
GCTGCGGCCAATAAGCCTAT+AGG - Chr7:81777211-81777230 MsG0780040734.01.T01:intron 55.0%
GTGGTGACTAGTGTGTGTGG+CGG + Chr7:81775588-81775607 None:intergenic 55.0%
GTGTGTGTGTGTGCATGCTG+CGG - Chr7:81777195-81777214 MsG0780040734.01.T01:intron 55.0%
TAGACCTCACCTTCCCACCA+AGG + Chr7:81780672-81780691 None:intergenic 55.0%
TAGGTTCGATCGGCTGGTGA+AGG + Chr7:81778137-81778156 None:intergenic 55.0%
TGGGCTCTACAAACCAGGTC+GGG - Chr7:81777552-81777571 MsG0780040734.01.T01:intron 55.0%
TTTCCCTTGGTGGGAAGGTG+AGG - Chr7:81780665-81780684 MsG0780040734.01.T01:intron 55.0%
! CCCTATGGGCCCGTTTGTTT+TGG + Chr7:81777063-81777082 None:intergenic 55.0%
! GCGGCCGCTATTGACTACTA+TGG - Chr7:81776706-81776725 MsG0780040734.01.T01:intron 55.0%
! GCGTTTGAGGCTACGAAACG+CGG - Chr7:81775475-81775494 MsG0780040734.01.T01:three_prime_UTR 55.0%
! GGTTGTTTCCCTTGGTGGGA+AGG - Chr7:81780660-81780679 MsG0780040734.01.T01:intron 55.0%
! GTGGTGGTGACTAGTGTGTG+TGG + Chr7:81775591-81775610 None:intergenic 55.0%
!! GGTCGTAGCTCGTTTTGGTG+GGG + Chr7:81777457-81777476 None:intergenic 55.0%
!!! CGTTTTGGGGGAAAGGATGG+TGG - Chr7:81781017-81781036 MsG0780040734.01.T01:intron 55.0%
!!! GGACGTTTTGGGGGAAAGGA+TGG - Chr7:81781014-81781033 MsG0780040734.01.T01:intron 55.0%
AGGATCGAGTCCCAGCACGT+AGG - Chr7:81777409-81777428 MsG0780040734.01.T01:intron 60.0%
AGGTTGGAAGGGGAAGCGAC+TGG + Chr7:81775551-81775570 None:intergenic 60.0%
AGTAGTCAATAGCGGCCGCG+CGG + Chr7:81776705-81776724 None:intergenic 60.0%
CGTGCTGGGCTCTACAAACC+AGG - Chr7:81777547-81777566 MsG0780040734.01.T01:intron 60.0%
GATCGTGCGATCCTACGTGC+TGG + Chr7:81777423-81777442 None:intergenic 60.0%
GTGACTAGTGTGTGTGGCGG+CGG + Chr7:81775585-81775604 None:intergenic 60.0%
TACGTGCTGGGACTCGATCC+TGG + Chr7:81777410-81777429 None:intergenic 60.0%
TTTCTGCTGCGGCGCTCCAT+GGG - Chr7:81777656-81777675 MsG0780040734.01.T01:intron 60.0%
! AAGGGGAAGCGACTGGTCAG+GGG + Chr7:81775544-81775563 None:intergenic 60.0%
! GAAGGGGAAGCGACTGGTCA+GGG + Chr7:81775545-81775564 None:intergenic 60.0%
! TGGGCGTTGCAGCTTCGGTT+TGG - Chr7:81776726-81776745 MsG0780040734.01.T01:intron 60.0%
!! TGGCTTGTTGCGTAGCGCTC+CGG - Chr7:81776667-81776686 MsG0780040734.01.T01:intron 60.0%
AGCGGCGCAACGCTTCGTAG+CGG + Chr7:81776628-81776647 None:intergenic 65.0%
GGCGCTCCATGGGGAAGAAG+AGG - Chr7:81777666-81777685 MsG0780040734.01.T01:intron 65.0%
GGCGGCTGAGAGATGGAGGT+TGG + Chr7:81775567-81775586 None:intergenic 65.0%
GTTTCTGCTGCGGCGCTCCA+TGG - Chr7:81777655-81777674 MsG0780040734.01.T01:intron 65.0%
TTCTGCTGCGGCGCTCCATG+GGG - Chr7:81777657-81777676 MsG0780040734.01.T01:intron 65.0%
! GGAAGGGGAAGCGACTGGTC+AGG + Chr7:81775546-81775565 None:intergenic 65.0%
GTGTGGCGGCGGCTGAGAGA+TGG + Chr7:81775574-81775593 None:intergenic 70.0%
TCAATAGCGGCCGCGCGGTG+CGG + Chr7:81776700-81776719 None:intergenic 70.0%
TGGCGGCGGCTGAGAGATGG+AGG + Chr7:81775571-81775590 None:intergenic 70.0%
! AGCGGCCGCGCGGTGCGGTG+CGG + Chr7:81776695-81776714 None:intergenic 85.0%
! CGCGCGGTGCGGTGCGGTGC+CGG + Chr7:81776689-81776708 None:intergenic 85.0%
! CGGCACCGCACCGCACCGCG+CGG - Chr7:81776687-81776706 MsG0780040734.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr7 gene 81775343 81781508 81775343 ID=MsG0780040734.01;Name=MsG0780040734.01
Chr7 mRNA 81775343 81781508 81775343 ID=MsG0780040734.01.T01;Parent=MsG0780040734.01;Name=MsG0780040734.01.T01;_AED=0.49;_eAED=0.49;_QI=361|1|1|1|0.75|0.6|5|243|179
Chr7 exon 81776556 81776678 81776556 ID=MsG0780040734.01.T01:exon:19058;Parent=MsG0780040734.01.T01
Chr7 exon 81781153 81781508 81781153 ID=MsG0780040734.01.T01:exon:19057;Parent=MsG0780040734.01.T01
Chr7 five_prime_UTR 81781153 81781508 81781153 ID=MsG0780040734.01.T01:five_prime_utr;Parent=MsG0780040734.01.T01
Chr7 five_prime_UTR 81776674 81776678 81776674 ID=MsG0780040734.01.T01:five_prime_utr;Parent=MsG0780040734.01.T01
Chr7 CDS 81776556 81776673 81776556 ID=MsG0780040734.01.T01:cds;Parent=MsG0780040734.01.T01
Chr7 CDS 81776170 81776240 81776170 ID=MsG0780040734.01.T01:cds;Parent=MsG0780040734.01.T01
Chr7 CDS 81775973 81776059 81775973 ID=MsG0780040734.01.T01:cds;Parent=MsG0780040734.01.T01
Chr7 CDS 81775586 81775849 81775586 ID=MsG0780040734.01.T01:cds;Parent=MsG0780040734.01.T01
Chr7 three_prime_UTR 81775343 81775585 81775343 ID=MsG0780040734.01.T01:three_prime_utr;Parent=MsG0780040734.01.T01
Chr7 mRNA 81775343 81776711 81775343 ID=MsG0780040734.01.T02;Parent=MsG0780040734.01;Name=MsG0780040734.01.T02;_AED=0.49;_eAED=0.49;_QI=38|1|1|1|1|1|4|243|179
Chr7 exon 81776556 81776711 81776556 ID=MsG0780040734.01.T02:exon:19062;Parent=MsG0780040734.01.T02
Chr7 five_prime_UTR 81776674 81776711 81776674 ID=MsG0780040734.01.T02:five_prime_utr;Parent=MsG0780040734.01.T02
Chr7 CDS 81776556 81776673 81776556 ID=MsG0780040734.01.T02:cds;Parent=MsG0780040734.01.T02
Chr7 CDS 81776170 81776240 81776170 ID=MsG0780040734.01.T02:cds;Parent=MsG0780040734.01.T02
Chr7 CDS 81775973 81776059 81775973 ID=MsG0780040734.01.T02:cds;Parent=MsG0780040734.01.T02
Chr7 CDS 81775586 81775849 81775586 ID=MsG0780040734.01.T02:cds;Parent=MsG0780040734.01.T02
Chr7 three_prime_UTR 81775343 81775585 81775343 ID=MsG0780040734.01.T02:three_prime_utr;Parent=MsG0780040734.01.T02
Gene Sequence

>MsG0780040734.01.T01

ATGGGAAAGATGTACAAGAAGAAACAAGCTCACGGACGTGGACCTCCAAGAGAACATAACAATAAGCAGGAAAATGAAATGGACATCAGGAAGATTATGGAAGACGTCCAAAACTTCAGCAACTCGCATATGACATGGAAAGAGCGCAAAAAGGTTGAAGATAGGAAGGTTGTTTCCCTTGGTGGGAAGCCCCTCAAGAATCAAAGATTACCTTTAAGTGTGGCACGACCAATGATGAAGAAACAAAAACAGAGGGAGGAAAAAATGCTCCAAGAGCGTATGATTCTAGGACGTTTTGGGGGAAAGGATGGTGGTAGCAGCAGTAAAAAACCAGCTGGAAAACACAAACCAGAGGACAGAGGTTTGAAGTTAAGTGAAGGTCGATTTAAAAATGGCATACTCGACGTGAAGCATTTGTTGAAGTCAACACCCACAAGAGGTCATGACACTGGAAAAAATATGTCAAATACAGGAAAAAGAAAAGGAGGCAACTGGAAACATGATAAAAAGGGTGGTGGTAAGAAGGATCAAATGTTTTAG

>MsG0780040734.01.T02

ATGGGAAAGATGTACAAGAAGAAACAAGCTCACGGACGTGGACCTCCAAGAGAACATAACAATAAGCAGGAAAATGAAATGGACATCAGGAAGATTATGGAAGACGTCCAAAACTTCAGCAACTCGCATATGACATGGAAAGAGCGCAAAAAGGTTGAAGATAGGAAGGTTGTTTCCCTTGGTGGGAAGCCCCTCAAGAATCAAAGATTACCTTTAAGTGTGGCACGACCAATGATGAAGAAACAAAAACAGAGGGAGGAAAAAATGCTCCAAGAGCGTATGATTCTAGGACGTTTTGGGGGAAAGGATGGTGGTAGCAGCAGTAAAAAACCAGCTGGAAAACACAAACCAGAGGACAGAGGTTTGAAGTTAAGTGAAGGTCGATTTAAAAATGGCATACTCGACGTGAAGCATTTGTTGAAGTCAACACCCACAAGAGGTCATGACACTGGAAAAAATATGTCAAATACAGGAAAAAGAAAAGGAGGCAACTGGAAACATGATAAAAAGGGTGGTGGTAAGAAGGATCAAATGTTTTAG

Protein sequence

>MsG0780040734.01.T01

MGKMYKKKQAHGRGPPREHNNKQENEMDIRKIMEDVQNFSNSHMTWKERKKVEDRKVVSLGGKPLKNQRLPLSVARPMMKKQKQREEKMLQERMILGRFGGKDGGSSSKKPAGKHKPEDRGLKLSEGRFKNGILDVKHLLKSTPTRGHDTGKNMSNTGKRKGGNWKHDKKGGGKKDQMF*

>MsG0780040734.01.T02

MGKMYKKKQAHGRGPPREHNNKQENEMDIRKIMEDVQNFSNSHMTWKERKKVEDRKVVSLGGKPLKNQRLPLSVARPMMKKQKQREEKMLQERMILGRFGGKDGGSSSKKPAGKHKPEDRGLKLSEGRFKNGILDVKHLLKSTPTRGHDTGKNMSNTGKRKGGNWKHDKKGGGKKDQMF*