Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351080 | XP_024634335.1 | 92.157 | 102 | 8 | 0 | 2 | 103 | 27 | 128 | 1.19e-60 | 194 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351080 | A0A396IQ09 | 92.157 | 102 | 8 | 0 | 2 | 103 | 27 | 128 | 5.67e-61 | 194 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006000 | Msa0351080 | 0.805211 | 1.489623e-49 | -8.615850e-47 |
| Msa0013050 | Msa0351080 | -0.820034 | 8.490102e-53 | -8.615850e-47 |
| Msa0014710 | Msa0351080 | 0.801073 | 1.069179e-48 | -8.615850e-47 |
| Msa0022310 | Msa0351080 | 0.819194 | 1.319718e-52 | -8.615850e-47 |
| Msa0032580 | Msa0351080 | 0.828908 | 6.920411e-55 | -8.615850e-47 |
| Msa0032610 | Msa0351080 | 0.807482 | 4.946442e-50 | -8.615850e-47 |
| Msa0085360 | Msa0351080 | -0.803757 | 2.993291e-49 | -8.615850e-47 |
| Msa0092990 | Msa0351080 | 0.805853 | 1.092355e-49 | -8.615850e-47 |
| Msa0094920 | Msa0351080 | 0.816188 | 6.289605e-52 | -8.615850e-47 |
| Msa0100000 | Msa0351080 | 0.808220 | 3.447691e-50 | -8.615850e-47 |
| Msa0101710 | Msa0351080 | 0.806322 | 8.704224e-50 | -8.615850e-47 |
| Msa0106520 | Msa0351080 | 0.801758 | 7.742835e-49 | -8.615850e-47 |
| Msa0115270 | Msa0351080 | 0.850708 | 1.425995e-60 | -8.615850e-47 |
| Msa0115390 | Msa0351080 | 0.816325 | 5.860086e-52 | -8.615850e-47 |
| Msa0116770 | Msa0351080 | 0.810607 | 1.059722e-50 | -8.615850e-47 |
| Msa0119850 | Msa0351080 | 0.802120 | 6.523466e-49 | -8.615850e-47 |
| Msa0129190 | Msa0351080 | -0.814968 | 1.175456e-51 | -8.615850e-47 |
| Msa0135380 | Msa0351080 | 0.836478 | 9.142819e-57 | -8.615850e-47 |
| Msa0136070 | Msa0351080 | 0.805559 | 1.259374e-49 | -8.615850e-47 |
| Msa0140390 | Msa0351080 | 0.812477 | 4.156500e-51 | -8.615850e-47 |
| Msa0149000 | Msa0351080 | 0.806751 | 7.064856e-50 | -8.615850e-47 |
| Msa0156650 | Msa0351080 | -0.824205 | 9.158726e-54 | -8.615850e-47 |
| Msa0160550 | Msa0351080 | 0.832233 | 1.062189e-55 | -8.615850e-47 |
| Msa0165210 | Msa0351080 | 0.808297 | 3.318588e-50 | -8.615850e-47 |
| Msa0165220 | Msa0351080 | 0.840073 | 1.083015e-57 | -8.615850e-47 |
| Msa0165660 | Msa0351080 | 0.800058 | 1.721836e-48 | -8.615850e-47 |
| Msa0169140 | Msa0351080 | -0.802114 | 6.542761e-49 | -8.615850e-47 |
| Msa0172780 | Msa0351080 | 0.834792 | 2.442323e-56 | -8.615850e-47 |
| Msa0172970 | Msa0351080 | 0.822351 | 2.482083e-53 | -8.615850e-47 |
| Msa0173740 | Msa0351080 | 0.804302 | 2.305365e-49 | -8.615850e-47 |
| Msa0173990 | Msa0351080 | 0.812390 | 4.343078e-51 | -8.615850e-47 |
| Msa0178960 | Msa0351080 | 0.815142 | 1.075597e-51 | -8.615850e-47 |
| Msa0178970 | Msa0351080 | 0.806034 | 1.000796e-49 | -8.615850e-47 |
| Msa0179280 | Msa0351080 | 0.800343 | 1.507027e-48 | -8.615850e-47 |
| Msa0183590 | Msa0351080 | 0.800644 | 1.308307e-48 | -8.615850e-47 |
| Msa0187070 | Msa0351080 | 0.811884 | 5.599727e-51 | -8.615850e-47 |
| Msa0192060 | Msa0351080 | 0.800596 | 1.338527e-48 | -8.615850e-47 |
| Msa0193120 | Msa0351080 | 0.810588 | 1.069637e-50 | -8.615850e-47 |
| Msa0197660 | Msa0351080 | 0.827089 | 1.896722e-54 | -8.615850e-47 |
| Msa0212310 | Msa0351080 | 0.804349 | 2.253965e-49 | -8.615850e-47 |
| Msa0220720 | Msa0351080 | 0.816445 | 5.510877e-52 | -8.615850e-47 |
| Msa0222890 | Msa0351080 | 0.814730 | 1.327684e-51 | -8.615850e-47 |
| Msa0227400 | Msa0351080 | 0.803962 | 2.713288e-49 | -8.615850e-47 |
| Msa0231540 | Msa0351080 | 0.803477 | 3.422225e-49 | -8.615850e-47 |
| Msa0231880 | Msa0351080 | 0.813453 | 2.539856e-51 | -8.615850e-47 |
| Msa0239800 | Msa0351080 | 0.829013 | 6.528740e-55 | -8.615850e-47 |
| Msa0241640 | Msa0351080 | 0.861384 | 1.065385e-63 | -8.615850e-47 |
| Msa0260210 | Msa0351080 | 0.813817 | 2.111824e-51 | -8.615850e-47 |
| Msa0262310 | Msa0351080 | 0.820045 | 8.440853e-53 | -8.615850e-47 |
| Msa0265520 | Msa0351080 | 0.801087 | 1.062590e-48 | -8.615850e-47 |
| Msa0269450 | Msa0351080 | 0.808120 | 3.620666e-50 | -8.615850e-47 |
| Msa0269810 | Msa0351080 | 0.801668 | 8.078182e-49 | -8.615850e-47 |
| Msa0271530 | Msa0351080 | 0.803868 | 2.838576e-49 | -8.615850e-47 |
| Msa0277820 | Msa0351080 | 0.804355 | 2.247740e-49 | -8.615850e-47 |
| Msa0279700 | Msa0351080 | 0.810638 | 1.043515e-50 | -8.615850e-47 |
| Msa0279790 | Msa0351080 | 0.877231 | 7.416153e-69 | -8.615850e-47 |
| Msa0280090 | Msa0351080 | 0.808928 | 2.433953e-50 | -8.615850e-47 |
| Msa0280490 | Msa0351080 | 0.801260 | 9.792632e-49 | -8.615850e-47 |
| Msa0289250 | Msa0351080 | 0.805630 | 1.216758e-49 | -8.615850e-47 |
| Msa0294560 | Msa0351080 | -0.802566 | 5.279672e-49 | -8.615850e-47 |
| Msa0298700 | Msa0351080 | 0.800436 | 1.442402e-48 | -8.615850e-47 |
| Msa0299870 | Msa0351080 | 0.827186 | 1.797543e-54 | -8.615850e-47 |
| Msa0303380 | Msa0351080 | 0.817062 | 4.006130e-52 | -8.615850e-47 |
| Msa0304290 | Msa0351080 | 0.809768 | 1.606846e-50 | -8.615850e-47 |
| Msa0304330 | Msa0351080 | 0.809847 | 1.545141e-50 | -8.615850e-47 |
| Msa0305890 | Msa0351080 | 0.815523 | 8.849741e-52 | -8.615850e-47 |
| Msa0317510 | Msa0351080 | 0.829076 | 6.301689e-55 | -8.615850e-47 |
| Msa0320100 | Msa0351080 | 0.808210 | 3.463073e-50 | -8.615850e-47 |
| Msa0323080 | Msa0351080 | 0.820971 | 5.173416e-53 | -8.615850e-47 |
| Msa0333030 | Msa0351080 | 0.822811 | 1.939361e-53 | -8.615850e-47 |
| Msa0333720 | Msa0351080 | -0.800558 | 1.362164e-48 | -8.615850e-47 |
| Msa0337240 | Msa0351080 | 0.801558 | 8.507503e-49 | -8.615850e-47 |
| Msa0337620 | Msa0351080 | 0.809766 | 1.608910e-50 | -8.615850e-47 |
| Msa0337650 | Msa0351080 | 0.814036 | 1.890205e-51 | -8.615850e-47 |
| Msa0340450 | Msa0351080 | 0.801817 | 7.530133e-49 | -8.615850e-47 |
| Msa0340810 | Msa0351080 | 0.813217 | 2.861727e-51 | -8.615850e-47 |
| Msa0342100 | Msa0351080 | 0.801117 | 1.047349e-48 | -8.615850e-47 |
| Msa0344830 | Msa0351080 | 0.854542 | 1.148249e-61 | -8.615850e-47 |
| Msa0344870 | Msa0351080 | 0.831454 | 1.654422e-55 | -8.615850e-47 |
| Msa0347360 | Msa0351080 | 0.818441 | 1.957059e-52 | -8.615850e-47 |
| Msa0350990 | Msa0351080 | 0.919537 | 3.978223e-87 | -8.615850e-47 |
| Msa0351030 | Msa0351080 | 0.922086 | 1.551497e-88 | -8.615850e-47 |
| Msa0351080 | Msa0351090 | 0.848116 | 7.521473e-60 | -8.615850e-47 |
| Msa0351080 | Msa0351100 | 0.892401 | 1.642016e-74 | -8.615850e-47 |
| Msa0351080 | Msa0358170 | 0.823783 | 1.149901e-53 | -8.615850e-47 |
| Msa0351080 | Msa0369050 | 0.802382 | 5.761537e-49 | -8.615850e-47 |
| Msa0351080 | Msa0372340 | 0.820793 | 5.683722e-53 | -8.615850e-47 |
| Msa0351080 | Msa0380040 | 0.818840 | 1.588884e-52 | -8.615850e-47 |
| Msa0351080 | Msa0380890 | 0.812375 | 4.376211e-51 | -8.615850e-47 |
| Msa0351080 | Msa0385580 | 0.807076 | 6.030038e-50 | -8.615850e-47 |
| Msa0351080 | Msa0392070 | 0.809376 | 1.951323e-50 | -8.615850e-47 |
| Msa0351080 | Msa0393950 | 0.815503 | 8.941079e-52 | -8.615850e-47 |
| Msa0351080 | Msa0398380 | 0.826134 | 3.204871e-54 | -8.615850e-47 |
| Msa0351080 | Msa0399340 | 0.803781 | 2.959731e-49 | -8.615850e-47 |
| Msa0351080 | Msa0404030 | 0.826095 | 3.274522e-54 | -8.615850e-47 |
| Msa0351080 | Msa0406880 | 0.882868 | 7.258773e-71 | -8.615850e-47 |
| Msa0351080 | Msa0406930 | 0.855008 | 8.413162e-62 | -8.615850e-47 |
| Msa0351080 | Msa0414950 | -0.808603 | 2.855517e-50 | -8.615850e-47 |
| Msa0351080 | Msa0419820 | 0.804870 | 1.755158e-49 | -8.615850e-47 |
| Msa0351080 | Msa0421780 | -0.832028 | 1.194077e-55 | -8.615850e-47 |
| Msa0351080 | Msa0425010 | 0.805629 | 1.217464e-49 | -8.615850e-47 |
| Msa0351080 | Msa0429290 | 0.830821 | 2.366070e-55 | -8.615850e-47 |
| Msa0351080 | Msa0430790 | 0.808864 | 2.511904e-50 | -8.615850e-47 |
| Msa0351080 | Msa0431670 | 0.821163 | 4.673587e-53 | -8.615850e-47 |
| Msa0351080 | Msa0432770 | 0.829577 | 4.763059e-55 | -8.615850e-47 |
| Msa0351080 | Msa0440400 | 0.807962 | 3.912441e-50 | -8.615850e-47 |
| Msa0351080 | Msa0442850 | 0.828051 | 1.114683e-54 | -8.615850e-47 |
| Msa0351080 | Msa0443500 | 0.804626 | 1.973257e-49 | -8.615850e-47 |
| Msa0351080 | Msa0445280 | 0.803634 | 3.174315e-49 | -8.615850e-47 |
| Msa0351080 | Msa0466280 | 0.810290 | 1.240638e-50 | -8.615850e-47 |
| Msa0351080 | Msa0466390 | 0.809976 | 1.449944e-50 | -8.615850e-47 |
| Msa0351080 | Msa0467900 | -0.841250 | 5.325754e-58 | -8.615850e-47 |
| Msa0351080 | Msa0467960 | -0.814536 | 1.465953e-51 | -8.615850e-47 |
| Msa0351080 | Msa0473240 | 0.806511 | 7.939605e-50 | -8.615850e-47 |
| Msa0351080 | Msa0475580 | 0.834602 | 2.725928e-56 | -8.615850e-47 |
| Msa0351080 | Msa0480000 | 0.825521 | 4.479646e-54 | -8.615850e-47 |
| Msa0351080 | Msa0480320 | 0.810927 | 9.035557e-51 | -8.615850e-47 |
| Msa0351080 | Msa0504020 | 0.800392 | 1.472896e-48 | -8.615850e-47 |
| Msa0351080 | Msa0509390 | 0.804625 | 1.974667e-49 | -8.615850e-47 |
| Msa0351080 | Msa0512750 | 0.802935 | 4.429570e-49 | -8.615850e-47 |
| Msa0351080 | Msa0519190 | 0.800153 | 1.647336e-48 | -8.615850e-47 |
| Msa0351080 | Msa0519220 | 0.827423 | 1.577609e-54 | -8.615850e-47 |
| Msa0351080 | Msa0521880 | 0.811457 | 6.934902e-51 | -8.615850e-47 |
| Msa0351080 | Msa0526890 | 0.808503 | 2.999114e-50 | -8.615850e-47 |
| Msa0351080 | Msa0531990 | -0.800057 | 1.723197e-48 | -8.615850e-47 |
| Msa0351080 | Msa0532330 | 0.813277 | 2.777090e-51 | -8.615850e-47 |
| Msa0351080 | Msa0535030 | 0.831662 | 1.469871e-55 | -8.615850e-47 |
| Msa0351080 | Msa0535060 | 0.835030 | 2.126518e-56 | -8.615850e-47 |
| Msa0351080 | Msa0553220 | -0.835005 | 2.158022e-56 | -8.615850e-47 |
| Msa0351080 | Msa0558690 | 0.805135 | 1.544582e-49 | -8.615850e-47 |
| Msa0351080 | Msa0562440 | 0.843692 | 1.198261e-58 | -8.615850e-47 |
| Msa0351080 | Msa0565960 | 0.800707 | 1.270008e-48 | -8.615850e-47 |
| Msa0351080 | Msa0568820 | 0.802397 | 5.719484e-49 | -8.615850e-47 |
| Msa0351080 | Msa0579290 | 0.802058 | 6.718020e-49 | -8.615850e-47 |
| Msa0351080 | Msa0579390 | 0.804369 | 2.232920e-49 | -8.615850e-47 |
| Msa0351080 | Msa0580420 | 0.800361 | 1.494159e-48 | -8.615850e-47 |
| Msa0351080 | Msa0591770 | 0.817829 | 2.691187e-52 | -8.615850e-47 |
| Msa0351080 | Msa0593650 | 0.851152 | 1.069055e-60 | -8.615850e-47 |
| Msa0351080 | Msa0607200 | 0.801431 | 9.031900e-49 | -8.615850e-47 |
| Msa0351080 | Msa0610430 | 0.805610 | 1.228476e-49 | -8.615850e-47 |
| Msa0351080 | Msa0619070 | 0.800580 | 1.348237e-48 | -8.615850e-47 |
| Msa0351080 | Msa0619470 | 0.813169 | 2.931932e-51 | -8.615850e-47 |
| Msa0351080 | Msa0620960 | 0.804588 | 2.010119e-49 | -8.615850e-47 |
| Msa0351080 | Msa0621490 | 0.838816 | 2.297149e-57 | -8.615850e-47 |
| Msa0351080 | Msa0621590 | 0.838624 | 2.574941e-57 | -8.615850e-47 |
| Msa0351080 | Msa0623080 | 0.831889 | 1.292070e-55 | -8.615850e-47 |
| Msa0351080 | Msa0625760 | 0.801087 | 1.062178e-48 | -8.615850e-47 |
| Msa0351080 | Msa0632870 | 0.800536 | 1.376154e-48 | -8.615850e-47 |
| Msa0351080 | Msa0638070 | 0.815265 | 1.010318e-51 | -8.615850e-47 |
| Msa0351080 | Msa0638280 | 0.840054 | 1.095666e-57 | -8.615850e-47 |
| Msa0351080 | Msa0638320 | 0.841954 | 3.472249e-58 | -8.615850e-47 |
| Msa0351080 | Msa0641670 | 0.828615 | 8.149014e-55 | -8.615850e-47 |
| Msa0351080 | Msa0647450 | -0.823082 | 1.677196e-53 | -8.615850e-47 |
| Msa0351080 | Msa0661190 | -0.827254 | 1.731341e-54 | -8.615850e-47 |
| Msa0351080 | Msa0662650 | 0.808462 | 3.060868e-50 | -8.615850e-47 |
| Msa0351080 | Msa0663380 | 0.808957 | 2.398835e-50 | -8.615850e-47 |
| Msa0351080 | Msa0664970 | 0.801617 | 8.273952e-49 | -8.615850e-47 |
| Msa0351080 | Msa0669850 | 0.816359 | 5.760657e-52 | -8.615850e-47 |
| Msa0351080 | Msa0677270 | 0.836838 | 7.400508e-57 | -8.615850e-47 |
| Msa0351080 | Msa0688480 | 0.808303 | 3.310153e-50 | -8.615850e-47 |
| Msa0351080 | Msa0689010 | 0.834357 | 3.140792e-56 | -8.615850e-47 |
| Msa0351080 | Msa0693380 | 0.803172 | 3.958233e-49 | -8.615850e-47 |
| Msa0351080 | Msa0698060 | 0.803992 | 2.675601e-49 | -8.615850e-47 |
| Msa0351080 | Msa0708860 | 0.803809 | 2.920003e-49 | -8.615850e-47 |
| Msa0351080 | Msa0716840 | 0.816498 | 5.361160e-52 | -8.615850e-47 |
| Msa0351080 | Msa0734660 | 0.813017 | 3.167146e-51 | -8.615850e-47 |
| Msa0351080 | Msa0743260 | 0.811229 | 7.770218e-51 | -8.615850e-47 |
| Msa0351080 | Msa0743720 | 0.818557 | 1.842056e-52 | -8.615850e-47 |
| Msa0351080 | Msa0744040 | 0.812391 | 4.340161e-51 | -8.615850e-47 |
| Msa0351080 | Msa0745790 | 0.811587 | 6.497239e-51 | -8.615850e-47 |
| Msa0351080 | Msa0777230 | 0.813605 | 2.351997e-51 | -8.615850e-47 |
| Msa0351080 | Msa0789570 | 0.816718 | 4.787073e-52 | -8.615850e-47 |
| Msa0351080 | Msa0792090 | 0.809308 | 2.017373e-50 | -8.615850e-47 |
| Msa0351080 | Msa0795090 | 0.832781 | 7.772918e-56 | -8.615850e-47 |
| Msa0351080 | Msa0795920 | 0.802984 | 4.327487e-49 | -8.615850e-47 |
| Msa0351080 | Msa0808080 | 0.804778 | 1.834957e-49 | -8.615850e-47 |
| Msa0351080 | Msa0812570 | 0.832810 | 7.644226e-56 | -8.615850e-47 |
| Msa0351080 | Msa0813670 | 0.800096 | 1.691739e-48 | -8.615850e-47 |
| Msa0351080 | Msa0813720 | 0.839449 | 1.574006e-57 | -8.615850e-47 |
| Msa0351080 | Msa0824680 | 0.807197 | 5.684154e-50 | -8.615850e-47 |
| Msa0351080 | Msa0826190 | 0.811579 | 6.523765e-51 | -8.615850e-47 |
| Msa0351080 | Msa0831580 | 0.804516 | 2.081260e-49 | -8.615850e-47 |
| Msa0351080 | Msa0831870 | 0.815339 | 9.724708e-52 | -8.615850e-47 |
| Msa0351080 | Msa0842210 | 0.801149 | 1.031794e-48 | -8.615850e-47 |
| Msa0351080 | Msa0850960 | 0.834768 | 2.475600e-56 | -8.615850e-47 |
| Msa0351080 | Msa0860410 | 0.819744 | 9.890157e-53 | -8.615850e-47 |
| Msa0351080 | Msa0870150 | 0.800935 | 1.140933e-48 | -8.615850e-47 |
| Msa0351080 | Msa0871270 | 0.808147 | 3.572531e-50 | -8.615850e-47 |
| Msa0351080 | Msa0876200 | 0.817690 | 2.892717e-52 | -8.615850e-47 |
| Msa0351080 | Msa0876580 | 0.803237 | 3.836169e-49 | -8.615850e-47 |
| Msa0351080 | Msa0881020 | 0.807023 | 6.188074e-50 | -8.615850e-47 |
| Msa0351080 | Msa0881030 | 0.802254 | 6.122937e-49 | -8.615850e-47 |
| Msa0351080 | Msa0884470 | 0.808842 | 2.538730e-50 | -8.615850e-47 |
| Msa0351080 | Msa0891040 | 0.811706 | 6.122073e-51 | -8.615850e-47 |
| Msa0351080 | Msa0897330 | 0.800113 | 1.678406e-48 | -8.615850e-47 |
| Msa0351080 | Msa0898670 | 0.803140 | 4.018119e-49 | -8.615850e-47 |
| Msa0351080 | Msa0907070 | 0.807977 | 3.883840e-50 | -8.615850e-47 |
| Msa0351080 | Msa0909000 | -0.802033 | 6.796490e-49 | -8.615850e-47 |
| Msa0351080 | Msa0938220 | 0.832298 | 1.024101e-55 | -8.615850e-47 |
| Msa0351080 | Msa0941750 | 0.804220 | 2.398130e-49 | -8.615850e-47 |
| Msa0351080 | Msa0944190 | 0.803445 | 3.475064e-49 | -8.615850e-47 |
| Msa0351080 | Msa0970420 | 0.837345 | 5.489408e-57 | -8.615850e-47 |
| Msa0351080 | Msa0976250 | 0.816685 | 4.868826e-52 | -8.615850e-47 |
| Msa0351080 | Msa0980090 | 0.814064 | 1.863336e-51 | -8.615850e-47 |
| Msa0351080 | Msa0990960 | 0.807529 | 4.834037e-50 | -8.615850e-47 |
| Msa0351080 | Msa0996170 | 0.831956 | 1.243878e-55 | -8.615850e-47 |
| Msa0351080 | Msa1003620 | 0.801788 | 7.632786e-49 | -8.615850e-47 |
| Msa0351080 | Msa1012830 | 0.826469 | 2.667562e-54 | -8.615850e-47 |
| Msa0351080 | Msa1014540 | 0.823602 | 1.268204e-53 | -8.615850e-47 |
| Msa0351080 | Msa1019640 | 0.825078 | 5.704206e-54 | -8.615850e-47 |
| Msa0351080 | Msa1039880 | 0.812463 | 4.186427e-51 | -8.615850e-47 |
| Msa0351080 | Msa1046300 | 0.814974 | 1.172194e-51 | -8.615850e-47 |
| Msa0351080 | Msa1051200 | 0.805338 | 1.400818e-49 | -8.615850e-47 |
| Msa0351080 | Msa1072460 | -0.818687 | 1.721152e-52 | -8.615850e-47 |
| Msa0351080 | Msa1082500 | 0.817284 | 3.571694e-52 | -8.615850e-47 |
| Msa0351080 | Msa1083210 | 0.803977 | 2.693845e-49 | -8.615850e-47 |
| Msa0351080 | Msa1089020 | 0.805396 | 1.362523e-49 | -8.615850e-47 |
| Msa0351080 | Msa1103980 | 0.811062 | 8.446653e-51 | -8.615850e-47 |
| Msa0351080 | Msa1104370 | 0.818430 | 1.968817e-52 | -8.615850e-47 |
| Msa0351080 | Msa1124310 | 0.818986 | 1.472334e-52 | -8.615850e-47 |
| Msa0351080 | Msa1127830 | 0.813757 | 2.178091e-51 | -8.615850e-47 |
| Msa0351080 | Msa1156020 | 0.806874 | 6.652999e-50 | -8.615850e-47 |
| Msa0351080 | Msa1171870 | 0.806285 | 8.858729e-50 | -8.615850e-47 |
| Msa0351080 | Msa1172230 | 0.807003 | 6.250137e-50 | -8.615850e-47 |
| Msa0351080 | Msa1174040 | 0.811146 | 8.099866e-51 | -8.615850e-47 |
| Msa0351080 | Msa1179460 | 0.800426 | 1.449590e-48 | -8.615850e-47 |
| Msa0351080 | Msa1181550 | 0.844824 | 5.950445e-59 | -8.615850e-47 |
| Msa0351080 | Msa1186950 | -0.840168 | 1.023162e-57 | -8.615850e-47 |
| Msa0351080 | Msa1194920 | 0.803295 | 3.731213e-49 | -8.615850e-47 |
| Msa0351080 | Msa1199560 | 0.803617 | 3.200370e-49 | -8.615850e-47 |
| Msa0351080 | Msa1203250 | 0.834244 | 3.352105e-56 | -8.615850e-47 |
| Msa0351080 | Msa1206670 | 0.802508 | 5.427899e-49 | -8.615850e-47 |
| Msa0351080 | Msa1217830 | 0.806904 | 6.558102e-50 | -8.615850e-47 |
| Msa0351080 | Msa1217860 | 0.827209 | 1.775201e-54 | -8.615850e-47 |
| Msa0351080 | Msa1233890 | 0.835501 | 1.618011e-56 | -8.615850e-47 |
| Msa0351080 | Msa1235740 | 0.802543 | 5.338477e-49 | -8.615850e-47 |
| Msa0351080 | Msa1238930 | 0.812329 | 4.478409e-51 | -8.615850e-47 |
| Msa0351080 | Msa1249490 | 0.825203 | 5.327625e-54 | -8.615850e-47 |
| Msa0351080 | Msa1267260 | 0.816462 | 5.463224e-52 | -8.615850e-47 |
| Msa0351080 | Msa1271210 | 0.854356 | 1.299945e-61 | -8.615850e-47 |
| Msa0351080 | Msa1275360 | 0.812869 | 3.412643e-51 | -8.615850e-47 |
| Msa0351080 | Msa1277660 | 0.805091 | 1.578231e-49 | -8.615850e-47 |
| Msa0351080 | Msa1279210 | 0.802943 | 4.413153e-49 | -8.615850e-47 |
| Msa0351080 | Msa1282580 | -0.809246 | 2.080300e-50 | -8.615850e-47 |
| Msa0351080 | Msa1294610 | -0.810849 | 9.392322e-51 | -8.615850e-47 |
| Msa0351080 | Msa1303160 | 0.800001 | 1.768651e-48 | -8.615850e-47 |
| Msa0351080 | Msa1314100 | 0.803295 | 3.731560e-49 | -8.615850e-47 |
| Msa0351080 | Msa1316820 | 0.831521 | 1.592941e-55 | -8.615850e-47 |
| Msa0351080 | Msa1323190 | 0.810229 | 1.278632e-50 | -8.615850e-47 |
| Msa0351080 | Msa1340470 | 0.816434 | 5.540412e-52 | -8.615850e-47 |
| Msa0351080 | Msa1351620 | 0.823078 | 1.680702e-53 | -8.615850e-47 |
| Msa0351080 | Msa1362880 | 0.842754 | 2.131685e-58 | -8.615850e-47 |
| Msa0351080 | Msa1369530 | 0.849482 | 3.143146e-60 | -8.615850e-47 |
| Msa0351080 | Msa1371430 | 0.844105 | 9.286807e-59 | -8.615850e-47 |
| Msa0351080 | Msa1394730 | 0.802443 | 5.596650e-49 | -8.615850e-47 |
| Msa0351080 | Msa1403930 | -0.824000 | 1.023086e-53 | -8.615850e-47 |
| Msa0351080 | Msa1410100 | 0.815216 | 1.035763e-51 | -8.615850e-47 |
| Msa0351080 | Msa1415640 | 0.827386 | 1.609763e-54 | -8.615850e-47 |
| Msa0351080 | Msa1426030 | 0.807802 | 4.230108e-50 | -8.615850e-47 |
| Msa0351080 | Msa1438700 | 0.809741 | 1.629145e-50 | -8.615850e-47 |
| Msa0351080 | Msa1439960 | 0.828956 | 6.737338e-55 | -8.615850e-47 |
| Msa0351080 | Msa1440000 | 0.804305 | 2.301991e-49 | -8.615850e-47 |
| Msa0351080 | Msa1447110 | 0.802787 | 4.754036e-49 | -8.615850e-47 |
| Msa0351080 | Msa1455490 | 0.831406 | 1.700019e-55 | -8.615850e-47 |
| Msa0351080 | Msa1464830 | 0.814561 | 1.446745e-51 | -8.615850e-47 |
| Msa0351080 | Msa1466300 | 0.808343 | 3.245503e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351080 | MtrunA17_Chr3g0085891 | 92.157 | 102 | 8 | 0 | 2 | 103 | 27 | 128 | 1.09e-64 | 194 |
| Msa0351080 | MtrunA17_Chr1g0160891 | 67.890 | 109 | 30 | 3 | 3 | 110 | 30 | 134 | 1.26e-41 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 38 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTAAATGTTGAAGATTC+TGG | 0.196464 | 3_1:+16953978 | Msa0351080:three_prime_UTR |
| TCCTTCTCCTTCAAGAAATA+AGG | 0.229085 | 3_1:-16950939 | None:intergenic |
| CATATGAAATCACCATATTC+TGG | 0.262324 | 3_1:-16951774 | None:intergenic |
| GAAAGAGGGTAAACATAAAA+AGG | 0.304527 | 3_1:+16952973 | Msa0351080:three_prime_UTR |
| TGGACTAGACTATTGATTCT+AGG | 0.314965 | 3_1:+16954157 | Msa0351080:three_prime_UTR |
| CGTCAATGGAACCCAGAATA+TGG | 0.322177 | 3_1:+16951762 | Msa0351080:CDS |
| AATGAAGAGAGTAGCGATTC+TGG | 0.324735 | 3_1:+16953031 | Msa0351080:three_prime_UTR |
| TGTGTTAAGGAGTTGGTTCC+AGG | 0.329012 | 3_1:+16951583 | Msa0351080:CDS |
| ATGTTTACCCTCTTTCTGTT+AGG | 0.331801 | 3_1:-16952966 | None:intergenic |
| TTTCTTTGAAATCCAACTCT+TGG | 0.372133 | 3_1:+16952940 | Msa0351080:exon |
| CTATGAGACAGTTGCTTGAA+TGG | 0.378644 | 3_1:+16950883 | Msa0351080:CDS |
| ATTTAAATGTTGAAGATTCT+GGG | 0.382185 | 3_1:+16953979 | Msa0351080:three_prime_UTR |
| TTCTTTGAAATCCAACTCTT+GGG | 0.398709 | 3_1:+16952941 | Msa0351080:exon |
| TATGAGACAGTTGCTTGAAT+GGG | 0.420424 | 3_1:+16950884 | Msa0351080:CDS |
| GTAAAGAATAAATACAGTTC+AGG | 0.446780 | 3_1:-16954106 | None:intergenic |
| CGACGAATGTGTTAAGGAGT+TGG | 0.450423 | 3_1:+16951576 | Msa0351080:CDS |
| TGGCAATGATGATTATGATA+AGG | 0.450844 | 3_1:+16953051 | Msa0351080:three_prime_UTR |
| TACTCGTGATTCTCTGCCAC+AGG | 0.453424 | 3_1:+16951543 | Msa0351080:CDS |
| GAAGGAGAAGGAAGAATTGA+AGG | 0.454002 | 3_1:+16950950 | Msa0351080:CDS |
| TGAAGAAAGTGAAGATGAAG+AGG | 0.461729 | 3_1:+16953006 | Msa0351080:three_prime_UTR |
| AGTGGCTCCTTATTTCTTGA+AGG | 0.473271 | 3_1:+16950932 | Msa0351080:CDS |
| CTTAATTGTCAGGGCGCAAA+AGG | 0.477030 | 3_1:+16951479 | Msa0351080:intron |
| ATATGAAATCACCATATTCT+GGG | 0.482590 | 3_1:-16951773 | None:intergenic |
| AATGTTGAAGATTCTGGGGA+TGG | 0.506964 | 3_1:+16953984 | Msa0351080:three_prime_UTR |
| CTTGGGTTCCTAACAGAAAG+AGG | 0.515242 | 3_1:+16952958 | Msa0351080:three_prime_UTR |
| AAACTAAGCAGATGCTGAGC+CGG | 0.515920 | 3_1:+16951733 | Msa0351080:CDS |
| TTTATTCTTTACTCATCCTG+TGG | 0.522332 | 3_1:+16954117 | Msa0351080:three_prime_UTR |
| TCCTTATTTCTTGAAGGAGA+AGG | 0.526141 | 3_1:+16950938 | Msa0351080:CDS |
| TCTGTTAGGAACCCAAGAGT+TGG | 0.560181 | 3_1:-16952952 | None:intergenic |
| TGGCTGCTTCTATACTAGCA+TGG | 0.576173 | 3_1:+16954137 | Msa0351080:three_prime_UTR |
| AAGGAGAAGGAAGAATTGAA+GGG | 0.585858 | 3_1:+16950951 | Msa0351080:CDS |
| ATGAGACAGTTGCTTGAATG+GGG | 0.600528 | 3_1:+16950885 | Msa0351080:CDS |
| TCAAGCAGCAAGTTTAACAA+AGG | 0.608770 | 3_1:-16954231 | None:intergenic |
| GATTTACCTGATGTTAAACA+CGG | 0.617922 | 3_1:+16950846 | Msa0351080:CDS |
| GCTAGTATAGAAGCAGCCAC+AGG | 0.632363 | 3_1:-16954133 | None:intergenic |
| TTTAAATGTTGAAGATTCTG+GGG | 0.632918 | 3_1:+16953980 | Msa0351080:three_prime_UTR |
| TTGGGTTCCTAACAGAAAGA+GGG | 0.637375 | 3_1:+16952959 | Msa0351080:three_prime_UTR |
| TCGTCGAAAACTAAAACCTG+TGG | 0.697134 | 3_1:-16951559 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAAAAAATTATTTTTTT+GGG | + | chr3_1:16949214-16949233 | Msa0351080:intron | 0.0% |
| !! | AAATATTATATTATTAATTA+AGG | - | chr3_1:16952712-16952731 | None:intergenic | 0.0% |
| !! | AATTTAACAAATTTCTTATA+GGG | + | chr3_1:16948658-16948677 | Msa0351080:intron | 10.0% |
| !!! | TGTGAAATATTTTTAAAATA+GGG | - | chr3_1:16948783-16948802 | None:intergenic | 10.0% |
| !!! | TTGTGAAATATTTTTAAAAT+AGG | - | chr3_1:16948784-16948803 | None:intergenic | 10.0% |
| !!! | TAAAAAATTCAACTTTTTTT+GGG | - | chr3_1:16949124-16949143 | None:intergenic | 10.0% |
| !!! | TTAAAAAATTCAACTTTTTT+TGG | - | chr3_1:16949125-16949144 | None:intergenic | 10.0% |
| !!! | AATAAAAGTGATTTTTTAAA+GGG | - | chr3_1:16949422-16949441 | None:intergenic | 10.0% |
| !!! | AAATAAAAGTGATTTTTTAA+AGG | - | chr3_1:16949423-16949442 | None:intergenic | 10.0% |
| !! | AAATGAAAATTAAAAAAACA+AGG | - | chr3_1:16949929-16949948 | None:intergenic | 10.0% |
| !!! | TTGTTAAATTGATTTATTGA+AGG | - | chr3_1:16948648-16948667 | None:intergenic | 15.0% |
| !! | CAATTTAACAAATTTCTTAT+AGG | + | chr3_1:16948657-16948676 | Msa0351080:intron | 15.0% |
| !!! | TAATAAAGTTTTACACTTAA+GGG | + | chr3_1:16948904-16948923 | Msa0351080:intron | 15.0% |
| !!! | TATGATTTTACTTTAAAAGA+GGG | - | chr3_1:16949039-16949058 | None:intergenic | 15.0% |
| !!! | GAAAAGTTGATATATTTATA+GGG | + | chr3_1:16949379-16949398 | Msa0351080:intron | 15.0% |
| !! | TTTGTAATTCAGTTATTTAT+TGG | - | chr3_1:16949757-16949776 | None:intergenic | 15.0% |
| !! | TATAGAAATAAATAGTTATG+AGG | - | chr3_1:16950687-16950706 | None:intergenic | 15.0% |
| !!! | TTTTGATAGATATTTTAAAG+TGG | + | chr3_1:16950914-16950933 | Msa0351080:CDS | 15.0% |
| !! | CTTTAAACAATAATATATCA+TGG | - | chr3_1:16951318-16951337 | None:intergenic | 15.0% |
| !!! | CAAATAATTTAGAACTAAAT+TGG | + | chr3_1:16951698-16951717 | Msa0351080:intron | 15.0% |
| !!! | ATTTAAGTTGTTTGTAAATT+TGG | + | chr3_1:16953735-16953754 | Msa0351080:intron | 15.0% |
| !!! | TTTTTCATTTTCGTATTAAA+AGG | + | chr3_1:16953907-16953926 | Msa0351080:intron | 15.0% |
| !!! | TTACTCATAGTATTTTGATA+TGG | - | chr3_1:16948124-16948143 | None:intergenic | 20.0% |
| !!! | CTTTAGTTTTATTACTATTG+TGG | - | chr3_1:16948377-16948396 | None:intergenic | 20.0% |
| !!! | GTAATAAAGTTTTACACTTA+AGG | + | chr3_1:16948903-16948922 | Msa0351080:intron | 20.0% |
| !!! | TTAAGGGTTAAATATGTTTT+TGG | + | chr3_1:16948920-16948939 | Msa0351080:intron | 20.0% |
| !!! | GAAAAGTTGGTATATTTATA+GGG | - | chr3_1:16948947-16948966 | None:intergenic | 20.0% |
| !!! | GAAAATGGAAAAATTTTTGA+GGG | - | chr3_1:16949007-16949026 | None:intergenic | 20.0% |
| !!! | TGAAAATGGAAAAATTTTTG+AGG | - | chr3_1:16949008-16949027 | None:intergenic | 20.0% |
| !!! | GTATGATTTTACTTTAAAAG+AGG | - | chr3_1:16949040-16949059 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATCACTACTTT+TGG | - | chr3_1:16949315-16949334 | None:intergenic | 20.0% |
| !!! | CGAAAAGTTGATATATTTAT+AGG | + | chr3_1:16949378-16949397 | Msa0351080:intron | 20.0% |
| !! | AACAATAAATTTACAGTCAA+AGG | - | chr3_1:16949540-16949559 | None:intergenic | 20.0% |
| !! | AATTCAGTTATTTATTGGAA+CGG | - | chr3_1:16949752-16949771 | None:intergenic | 20.0% |
| !! | TTGATTTATTTATGCTTATC+TGG | - | chr3_1:16950573-16950592 | None:intergenic | 20.0% |
| !! | ACAGAAAATGAATTATAGTA+CGG | - | chr3_1:16950622-16950641 | None:intergenic | 20.0% |
| !! | ACAGAAAATAGATAATTACA+CGG | - | chr3_1:16950787-16950806 | None:intergenic | 20.0% |
| !! | TCACAATATATATCATGTAA+AGG | - | chr3_1:16950991-16951010 | None:intergenic | 20.0% |
| !!! | ATTGTTTAAAGTATCTAACA+TGG | + | chr3_1:16951327-16951346 | Msa0351080:intron | 20.0% |
| !!! | GAATATTTTCAATGCTTATA+TGG | + | chr3_1:16951412-16951431 | Msa0351080:intron | 20.0% |
| !! | TGTTCGAATTATAGAATAAA+GGG | + | chr3_1:16952040-16952059 | Msa0351080:intron | 20.0% |
| !! | TTGTTAGTTAGATTTCTATT+TGG | + | chr3_1:16952147-16952166 | Msa0351080:intron | 20.0% |
| !! | TGTTAGTTAGATTTCTATTT+GGG | + | chr3_1:16952148-16952167 | Msa0351080:intron | 20.0% |
| !! | TATATATATGTTGTCAATAG+CGG | + | chr3_1:16952257-16952276 | Msa0351080:intron | 20.0% |
| !!! | TCATTTTGACTGTAAAAAAA+AGG | - | chr3_1:16952503-16952522 | None:intergenic | 20.0% |
| !! | AAATTAACACATAAAAGTAG+AGG | - | chr3_1:16953088-16953107 | None:intergenic | 20.0% |
| !!! | TTCAATTTGAAAATTTTGTG+AGG | - | chr3_1:16953159-16953178 | None:intergenic | 20.0% |
| !! | TAAATGTTAAAAAACCTCTA+CGG | + | chr3_1:16953282-16953301 | Msa0351080:intron | 20.0% |
| !! | AAAAGAAATCATATTACACT+TGG | + | chr3_1:16953644-16953663 | Msa0351080:intron | 20.0% |
| !! | CTTAAATTGAATACTGAAAT+AGG | - | chr3_1:16953722-16953741 | None:intergenic | 20.0% |
| !!! | TTGGATTTTAGAAATGTATA+AGG | + | chr3_1:16953754-16953773 | Msa0351080:intron | 20.0% |
| !!! | TGGATTTTAGAAATGTATAA+GGG | + | chr3_1:16953755-16953774 | Msa0351080:intron | 20.0% |
| !! | CGAAAATGAAAAAAAAATCT+TGG | - | chr3_1:16953900-16953919 | None:intergenic | 20.0% |
| !!! | CTGCAAAATTTTAATTTAGT+TGG | - | chr3_1:16953937-16953956 | None:intergenic | 20.0% |
| !! | ATTTAAATGTTGAAGATTCT+GGG | + | chr3_1:16953979-16953998 | Msa0351080:three_prime_UTR | 20.0% |
| !! | GTCGTTAATTATCTTTTGAA+AGG | + | chr3_1:16948167-16948186 | Msa0351080:intron | 25.0% |
| ! | AAATCTTACGATCAAAATGT+TGG | + | chr3_1:16948196-16948215 | Msa0351080:intron | 25.0% |
| ! | AGTAAATTGGTGAATTTCAT+GGG | - | chr3_1:16948336-16948355 | None:intergenic | 25.0% |
| ! | TATAAATTACATGTACACGT+AGG | - | chr3_1:16948417-16948436 | None:intergenic | 25.0% |
| ! | TACAAACTACAATATCATAG+AGG | - | chr3_1:16948752-16948771 | None:intergenic | 25.0% |
| ! | AGTCCCTATATAATACAAAT+AGG | + | chr3_1:16948834-16948853 | Msa0351080:intron | 25.0% |
| ! | GTCCCTATATAATACAAATA+GGG | + | chr3_1:16948835-16948854 | Msa0351080:intron | 25.0% |
| ! | GTCCCTATTTGTATTATATA+GGG | - | chr3_1:16948840-16948859 | None:intergenic | 25.0% |
| ! | AGTCCCTATTTGTATTATAT+AGG | - | chr3_1:16948841-16948860 | None:intergenic | 25.0% |
| !!! | CGAAAAGTTGGTATATTTAT+AGG | - | chr3_1:16948948-16948967 | None:intergenic | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | - | chr3_1:16949348-16949367 | None:intergenic | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | - | chr3_1:16949347-16949366 | None:intergenic | 25.0% |
| ! | TTATAGAGACTAAAAGTTGA+AGG | + | chr3_1:16949334-16949353 | Msa0351080:intron | 25.0% |
| ! | AAATATTTCTCGTATCTATG+TGG | + | chr3_1:16949851-16949870 | Msa0351080:intron | 25.0% |
| !! | AAAACAAGGTCTTATAATCT+AGG | - | chr3_1:16949915-16949934 | None:intergenic | 25.0% |
| ! | GGACTTATTGAAAACAAATT+AGG | + | chr3_1:16950032-16950051 | Msa0351080:intron | 25.0% |
| ! | GTTTCTTTCATAAACTATGA+TGG | + | chr3_1:16950353-16950372 | Msa0351080:intron | 25.0% |
| ! | TTATAGACATGCAATAAGAT+GGG | + | chr3_1:16950403-16950422 | Msa0351080:intron | 25.0% |
| ! | AAAATGAATTATAGTACGGA+TGG | - | chr3_1:16950618-16950637 | None:intergenic | 25.0% |
| ! | ACATGATATATATTGTGAGA+TGG | + | chr3_1:16950993-16951012 | Msa0351080:intron | 25.0% |
| !! | GTCCTCTAAAAATTTGAATA+TGG | + | chr3_1:16951067-16951086 | Msa0351080:intron | 25.0% |
| !!! | AGCCATATTCAAATTTTTAG+AGG | - | chr3_1:16951072-16951091 | None:intergenic | 25.0% |
| !!! | GGTCAAATTTTAATCTTTGA+GGG | - | chr3_1:16951135-16951154 | None:intergenic | 25.0% |
| !!! | TGGTCAAATTTTAATCTTTG+AGG | - | chr3_1:16951136-16951155 | None:intergenic | 25.0% |
| !! | ATGTCTTTGGAAGATTATTA+CGG | + | chr3_1:16951252-16951271 | Msa0351080:intron | 25.0% |
| ! | GATGTACATAATTAAAAGCT+AGG | + | chr3_1:16951376-16951395 | Msa0351080:intron | 25.0% |
| !! | GAATAATGGAATAGGATTTA+CGG | + | chr3_1:16951609-16951628 | Msa0351080:intron | 25.0% |
| !! | AATAATGGAATAGGATTTAC+GGG | + | chr3_1:16951610-16951629 | Msa0351080:intron | 25.0% |
| !! | TACTTTTCTTTATGCATTTG+AGG | + | chr3_1:16951665-16951684 | Msa0351080:intron | 25.0% |
| !! | AGAACTAAATTGGTAATTTC+AGG | + | chr3_1:16951708-16951727 | Msa0351080:intron | 25.0% |
| ! | ATATGAAATCACCATATTCT+GGG | - | chr3_1:16951776-16951795 | None:intergenic | 25.0% |
| ! | ATATTATCCATGTTATGAGT+TGG | + | chr3_1:16951941-16951960 | Msa0351080:intron | 25.0% |
| ! | CTATTAATAAGATGTTTGTG+TGG | + | chr3_1:16951972-16951991 | Msa0351080:intron | 25.0% |
| ! | GTGTTCGAATTATAGAATAA+AGG | + | chr3_1:16952039-16952058 | Msa0351080:intron | 25.0% |
| !! | TCTGTTGTATTTTCTGTTAT+TGG | + | chr3_1:16952179-16952198 | Msa0351080:intron | 25.0% |
| ! | TATATACATAGTTGTCAAAG+CGG | - | chr3_1:16952825-16952844 | None:intergenic | 25.0% |
| !!! | CTGTTTTGAGATAAAATTAG+TGG | + | chr3_1:16953233-16953252 | Msa0351080:intron | 25.0% |
| !!! | GGTTTTTTAACATTTAGAGA+CGG | - | chr3_1:16953278-16953297 | None:intergenic | 25.0% |
| ! | ATAGCAAACTTCATCAAATA+TGG | + | chr3_1:16953337-16953356 | Msa0351080:intron | 25.0% |
| ! | TATACAGTTTGTAATGATAC+TGG | - | chr3_1:16953526-16953545 | None:intergenic | 25.0% |
| ! | ACAGTATGTGTAATATTTGT+AGG | - | chr3_1:16953609-16953628 | None:intergenic | 25.0% |
| ! | GATTTAAATGTTGAAGATTC+TGG | + | chr3_1:16953978-16953997 | Msa0351080:three_prime_UTR | 25.0% |
| ! | TTTAAATGTTGAAGATTCTG+GGG | + | chr3_1:16953980-16953999 | Msa0351080:three_prime_UTR | 25.0% |
| ! | GTAAAGAATAAATACAGTTC+AGG | - | chr3_1:16954109-16954128 | None:intergenic | 25.0% |
| AATGAGAGAATGCAACATAT+GGG | - | chr3_1:16948087-16948106 | None:intergenic | 30.0% | |
| AGATAATTAACGACTCAACA+AGG | - | chr3_1:16948161-16948180 | None:intergenic | 30.0% | |
| GATCTTATCATTGCTTCTAT+TGG | - | chr3_1:16948251-16948270 | None:intergenic | 30.0% | |
| GAGTAAATTGGTGAATTTCA+TGG | - | chr3_1:16948337-16948356 | None:intergenic | 30.0% | |
| !!! | TCCATTTGTACTTTTTCCAT+AGG | + | chr3_1:16949711-16949730 | Msa0351080:intron | 30.0% |
| ! | ACCTATGGAAAAAGTACAAA+TGG | - | chr3_1:16949715-16949734 | None:intergenic | 30.0% |
| ! | GATTTTAAATTCTGCTAACG+AGG | + | chr3_1:16949965-16949984 | Msa0351080:intron | 30.0% |
| AATCTATCACATAGAGCTTA+TGG | + | chr3_1:16950118-16950137 | Msa0351080:intron | 30.0% | |
| AAGAAGTTAATCCAAGCAAA+CGG | + | chr3_1:16950237-16950256 | Msa0351080:intron | 30.0% | |
| GGGTAAACAACTTAATTAAG+TGG | + | chr3_1:16950272-16950291 | Msa0351080:intron | 30.0% | |
| CTTATAGACATGCAATAAGA+TGG | + | chr3_1:16950402-16950421 | Msa0351080:intron | 30.0% | |
| TATAGACATGCAATAAGATG+GGG | + | chr3_1:16950404-16950423 | Msa0351080:intron | 30.0% | |
| !!! | CTTCTTTGTTTTTTTGTCCT+TGG | - | chr3_1:16950496-16950515 | None:intergenic | 30.0% |
| !! | ATAACACTTTGAGACTGTTT+GGG | - | chr3_1:16950546-16950565 | None:intergenic | 30.0% |
| CTTTATCAATCTGATTCTAC+AGG | + | chr3_1:16950818-16950837 | Msa0351080:intron | 30.0% | |
| GATTTACCTGATGTTAAACA+CGG | + | chr3_1:16950846-16950865 | Msa0351080:CDS | 30.0% | |
| ! | ATTTTTCCGTGTTTAACATC+AGG | - | chr3_1:16950855-16950874 | None:intergenic | 30.0% |
| TGATGTTAAACACGGAAAAA+TGG | + | chr3_1:16950854-16950873 | Msa0351080:CDS | 30.0% | |
| TGATAAAGAAAACCGCAATT+TGG | + | chr3_1:16951045-16951064 | Msa0351080:intron | 30.0% | |
| !! | ATTTTTAGAGGACCAAATTG+CGG | - | chr3_1:16951060-16951079 | None:intergenic | 30.0% |
| ! | TTGGTGATAAATTCTCAACA+TGG | - | chr3_1:16951156-16951175 | None:intergenic | 30.0% |
| TCACCAAATTAGAATTAGAG+TGG | + | chr3_1:16951169-16951188 | Msa0351080:intron | 30.0% | |
| TCACCACTCTAATTCTAATT+TGG | - | chr3_1:16951175-16951194 | None:intergenic | 30.0% | |
| ! | GTGATACTTTTGTATCTTGA+AGG | + | chr3_1:16951216-16951235 | Msa0351080:intron | 30.0% |
| ATGTGGCTTTCAAATGATTA+GGG | - | chr3_1:16951283-16951302 | None:intergenic | 30.0% | |
| AATGTGGCTTTCAAATGATT+AGG | - | chr3_1:16951284-16951303 | None:intergenic | 30.0% | |
| ! | ATCATTTGAAAGCCACATTT+TGG | + | chr3_1:16951285-16951304 | Msa0351080:intron | 30.0% |
| CATGGAATAAATCCAAAATG+TGG | - | chr3_1:16951300-16951319 | None:intergenic | 30.0% | |
| CAGATATTTAGGGACAAATA+TGG | - | chr3_1:16951440-16951459 | None:intergenic | 30.0% | |
| CATATTTGTCCCTAAATATC+TGG | + | chr3_1:16951438-16951457 | Msa0351080:intron | 30.0% | |
| TGACAATTAAGCAAGAAAAG+CGG | - | chr3_1:16951470-16951489 | None:intergenic | 30.0% | |
| ! | CTTTTCTTGCTTAATTGTCA+GGG | + | chr3_1:16951470-16951489 | Msa0351080:intron | 30.0% |
| !!! | GGAAATGGTTATGTTTTTTG+TGG | + | chr3_1:16951631-16951650 | Msa0351080:intron | 30.0% |
| CATATGAAATCACCATATTC+TGG | - | chr3_1:16951777-16951796 | None:intergenic | 30.0% | |
| ATGATCAATACTCAGTAGAA+TGG | - | chr3_1:16951899-16951918 | None:intergenic | 30.0% | |
| ATTCTATGTACATATCGTCA+TGG | + | chr3_1:16951917-16951936 | Msa0351080:intron | 30.0% | |
| TTCTATGTACATATCGTCAT+GGG | + | chr3_1:16951918-16951937 | Msa0351080:intron | 30.0% | |
| TACAAAGAGAAAGGGATAAT+GGG | - | chr3_1:16952225-16952244 | None:intergenic | 30.0% | |
| TTACAAAGAGAAAGGGATAA+TGG | - | chr3_1:16952226-16952245 | None:intergenic | 30.0% | |
| ACAGTCAAAATGAAGAAGAA+AGG | + | chr3_1:16952510-16952529 | Msa0351080:intron | 30.0% | |
| CAGTCAAAATGAAGAAGAAA+GGG | + | chr3_1:16952511-16952530 | Msa0351080:intron | 30.0% | |
| !! | TTTCTTTGAAATCCAACTCT+TGG | + | chr3_1:16952940-16952959 | Msa0351080:exon | 30.0% |
| !! | TTCTTTGAAATCCAACTCTT+GGG | + | chr3_1:16952941-16952960 | Msa0351080:exon | 30.0% |
| GAAAGAGGGTAAACATAAAA+AGG | + | chr3_1:16952973-16952992 | Msa0351080:three_prime_UTR | 30.0% | |
| TGGCAATGATGATTATGATA+AGG | + | chr3_1:16953051-16953070 | Msa0351080:three_prime_UTR | 30.0% | |
| ! | TCTTTTCACAAGTTCAAGAA+TGG | - | chr3_1:16953113-16953132 | None:intergenic | 30.0% |
| TGAAGAATCAAAACCACATT+TGG | + | chr3_1:16953209-16953228 | Msa0351080:intron | 30.0% | |
| ATAGTACCATGAAAAGTAGA+TGG | + | chr3_1:16953376-16953395 | Msa0351080:intron | 30.0% | |
| TAGTACCATGAAAAGTAGAT+GGG | + | chr3_1:16953377-16953396 | Msa0351080:intron | 30.0% | |
| GAATGGTAAACAGAACATTT+GGG | - | chr3_1:16953414-16953433 | None:intergenic | 30.0% | |
| AGAATGGTAAACAGAACATT+TGG | - | chr3_1:16953415-16953434 | None:intergenic | 30.0% | |
| ! | AGAGGAATTGTCTTTTATGA+TGG | - | chr3_1:16953487-16953506 | None:intergenic | 30.0% |
| AAAAGACAATTCCTCTACAT+AGG | + | chr3_1:16953491-16953510 | Msa0351080:intron | 30.0% | |
| ! | ATGATTTCTTTTCCTTCACA+CGG | - | chr3_1:16953636-16953655 | None:intergenic | 30.0% |
| TTTATTCTTTACTCATCCTG+TGG | + | chr3_1:16954117-16954136 | Msa0351080:three_prime_UTR | 30.0% | |
| CAATGAGAGAATGCAACATA+TGG | - | chr3_1:16948088-16948107 | None:intergenic | 35.0% | |
| TAACGAATGACATTGAGAAG+TGG | + | chr3_1:16948294-16948313 | Msa0351080:intron | 35.0% | |
| CCAAATGATGTCGAGTAAAT+TGG | - | chr3_1:16948349-16948368 | None:intergenic | 35.0% | |
| CCAATTTACTCGACATCATT+TGG | + | chr3_1:16948346-16948365 | Msa0351080:intron | 35.0% | |
| TTTGAGGGACTAAAAGTTGA+AGG | - | chr3_1:16948992-16949011 | None:intergenic | 35.0% | |
| AGAGGGATCAAAAGTGAAAA+TGG | - | chr3_1:16949022-16949041 | None:intergenic | 35.0% | |
| TCTTCTGTAGACTTCGTAAA+TGG | + | chr3_1:16949633-16949652 | Msa0351080:intron | 35.0% | |
| AAAGTACAAATGGAACTGGT+CGG | - | chr3_1:16949705-16949724 | None:intergenic | 35.0% | |
| ! | GGAAAAAGTACAAATGGAAC+TGG | - | chr3_1:16949709-16949728 | None:intergenic | 35.0% |
| TTGAACGTAAACACATGTGT+TGG | - | chr3_1:16949826-16949845 | None:intergenic | 35.0% | |
| GAATATCTGTGATAGAGAGA+AGG | + | chr3_1:16950008-16950027 | Msa0351080:intron | 35.0% | |
| ATAGAGCTTATGGTGATAAG+CGG | + | chr3_1:16950128-16950147 | Msa0351080:intron | 35.0% | |
| ! | ATTAAGTTGTTTACCCAGAC+AGG | - | chr3_1:16950268-16950287 | None:intergenic | 35.0% |
| !! | CATAACACTTTGAGACTGTT+TGG | - | chr3_1:16950547-16950566 | None:intergenic | 35.0% |
| TGAATTATAGTACGGATGGA+TGG | - | chr3_1:16950614-16950633 | None:intergenic | 35.0% | |
| TATGAGACAGTTGCTTGAAT+GGG | + | chr3_1:16950884-16950903 | Msa0351080:CDS | 35.0% | |
| ! | TCCTTATTTCTTGAAGGAGA+AGG | + | chr3_1:16950938-16950957 | Msa0351080:CDS | 35.0% |
| TCCTTCTCCTTCAAGAAATA+AGG | - | chr3_1:16950942-16950961 | None:intergenic | 35.0% | |
| AAGGAGAAGGAAGAATTGAA+GGG | + | chr3_1:16950951-16950970 | Msa0351080:CDS | 35.0% | |
| ! | GTGTGATGACAAGTTTTTGT+GGG | - | chr3_1:16951108-16951127 | None:intergenic | 35.0% |
| ! | AGTGTGATGACAAGTTTTTG+TGG | - | chr3_1:16951109-16951128 | None:intergenic | 35.0% |
| !! | GTATCTTGAAGGCATTGATT+TGG | + | chr3_1:16951227-16951246 | Msa0351080:intron | 35.0% |
| !! | CATTGATTTGGTGATGTCTT+TGG | + | chr3_1:16951239-16951258 | Msa0351080:intron | 35.0% |
| GACAATTAAGCAAGAAAAGC+GGG | - | chr3_1:16951469-16951488 | None:intergenic | 35.0% | |
| ! | GCTTTTCTTGCTTAATTGTC+AGG | + | chr3_1:16951469-16951488 | Msa0351080:intron | 35.0% |
| CAGAGAATCACGAGTAAAAA+TGG | - | chr3_1:16951539-16951558 | None:intergenic | 35.0% | |
| ! | AGTTTTCGACGAATGTGTTA+AGG | + | chr3_1:16951570-16951589 | Msa0351080:CDS | 35.0% |
| TTGGTTCCAGGTATGAATAA+TGG | + | chr3_1:16951595-16951614 | Msa0351080:intron | 35.0% | |
| CCTATTCCATTATTCATACC+TGG | - | chr3_1:16951604-16951623 | None:intergenic | 35.0% | |
| ! | CCAGGTATGAATAATGGAAT+AGG | + | chr3_1:16951601-16951620 | Msa0351080:intron | 35.0% |
| ! | CTTTATGCATTTGAGGTTTC+TGG | + | chr3_1:16951672-16951691 | Msa0351080:intron | 35.0% |
| !! | TGAAAGCGCATGATCTATTT+TGG | + | chr3_1:16951860-16951879 | Msa0351080:intron | 35.0% |
| TAATAAGATGTTTGTGTGGC+AGG | + | chr3_1:16951976-16951995 | Msa0351080:intron | 35.0% | |
| ATTCGAACACTTTCCTCTAA+AGG | - | chr3_1:16952029-16952048 | None:intergenic | 35.0% | |
| ! | CTGTTATTGGCTAGTTGTTA+TGG | + | chr3_1:16952192-16952211 | Msa0351080:intron | 35.0% |
| CCTTCTGTTACAAAGAGAAA+GGG | - | chr3_1:16952233-16952252 | None:intergenic | 35.0% | |
| ACCTTCTGTTACAAAGAGAA+AGG | - | chr3_1:16952234-16952253 | None:intergenic | 35.0% | |
| ! | AGAACAGAGATGAGATTTTG+TGG | - | chr3_1:16952469-16952488 | None:intergenic | 35.0% |
| GATTAGAGATCTAGAGATCT+AGG | + | chr3_1:16952549-16952568 | Msa0351080:intron | 35.0% | |
| ! | TGCCAAAGATCCTTTTCTAA+GGG | - | chr3_1:16952856-16952875 | None:intergenic | 35.0% |
| ! | ATGCCAAAGATCCTTTTCTA+AGG | - | chr3_1:16952857-16952876 | None:intergenic | 35.0% |
| GGATCTTTGGCATATATCTT+TGG | + | chr3_1:16952864-16952883 | Msa0351080:intron | 35.0% | |
| ATGTTTACCCTCTTTCTGTT+AGG | - | chr3_1:16952969-16952988 | None:intergenic | 35.0% | |
| AGAGGGTAAACATAAAAAGG+AGG | + | chr3_1:16952976-16952995 | Msa0351080:three_prime_UTR | 35.0% | |
| TGAAGAAAGTGAAGATGAAG+AGG | + | chr3_1:16953006-16953025 | Msa0351080:three_prime_UTR | 35.0% | |
| CATAAAAGTAGAGGATAGAG+TGG | - | chr3_1:16953079-16953098 | None:intergenic | 35.0% | |
| ATCTCAAAACAGACCAAATG+TGG | - | chr3_1:16953225-16953244 | None:intergenic | 35.0% | |
| AGTACCATGAAAAGTAGATG+GGG | + | chr3_1:16953378-16953397 | Msa0351080:intron | 35.0% | |
| ATGTTCTGTTTACCATTCTG+AGG | + | chr3_1:16953416-16953435 | Msa0351080:intron | 35.0% | |
| ! | TGATTTCTTTTCCTTCACAC+GGG | - | chr3_1:16953635-16953654 | None:intergenic | 35.0% |
| !!! | AGGTTTTTTACATGAGTCGA+AGG | - | chr3_1:16953702-16953721 | None:intergenic | 35.0% |
| ATGTATAAGGGAGTAATGTG+CGG | + | chr3_1:16953767-16953786 | Msa0351080:intron | 35.0% | |
| CACACTCACAACAAAAAAGA+GGG | - | chr3_1:16953840-16953859 | None:intergenic | 35.0% | |
| CTATCAACTTCGTAATTCTC+TGG | + | chr3_1:16954049-16954068 | Msa0351080:intron | 35.0% | |
| !! | TGGACTAGACTATTGATTCT+AGG | + | chr3_1:16954157-16954176 | Msa0351080:three_prime_UTR | 35.0% |
| TCAAGCAGCAAGTTTAACAA+AGG | - | chr3_1:16954234-16954253 | None:intergenic | 35.0% | |
| GGTTCAAGAAATTGTTTGCG+AGG | + | chr3_1:16948217-16948236 | Msa0351080:intron | 40.0% | |
| AAGAAATTGTTTGCGAGGAG+AGG | + | chr3_1:16948222-16948241 | Msa0351080:intron | 40.0% | |
| GTACACGTAGGATTCATCTA+TGG | - | chr3_1:16948405-16948424 | None:intergenic | 40.0% | |
| GAGGGACTAAAACGAAAAGT+TGG | - | chr3_1:16948960-16948979 | None:intergenic | 40.0% | |
| TCATAACGTAGCGAAGTTCT+TGG | + | chr3_1:16949473-16949492 | Msa0351080:intron | 40.0% | |
| GAGTGTAGAGATGTTACCTA+TGG | - | chr3_1:16949730-16949749 | None:intergenic | 40.0% | |
| TATCTGTGATAGAGAGAAGG+TGG | + | chr3_1:16950011-16950030 | Msa0351080:intron | 40.0% | |
| ! | ATGCAATAAGATGGGGTGTT+GGG | + | chr3_1:16950411-16950430 | Msa0351080:intron | 40.0% |
| TATCCCTTATCTCGTACAAG+CGG | - | chr3_1:16950442-16950461 | None:intergenic | 40.0% | |
| CTTGTACGAGATAAGGGATA+AGG | + | chr3_1:16950442-16950461 | Msa0351080:intron | 40.0% | |
| GATAAGGGATAAGGAGTTAG+AGG | + | chr3_1:16950451-16950470 | Msa0351080:intron | 40.0% | |
| ! | GGATGGATAGAAGGTTTGTT+TGG | - | chr3_1:16950597-16950616 | None:intergenic | 40.0% |
| CAACCATCTCTCTGGTTAAA+TGG | + | chr3_1:16950648-16950667 | Msa0351080:intron | 40.0% | |
| TGACCATTTAACCAGAGAGA+TGG | - | chr3_1:16950654-16950673 | None:intergenic | 40.0% | |
| TTCATAAGCTTGCAAGCAAG+AGG | + | chr3_1:16950708-16950727 | Msa0351080:intron | 40.0% | |
| TCATAAGCTTGCAAGCAAGA+GGG | + | chr3_1:16950709-16950728 | Msa0351080:intron | 40.0% | |
| CTATGAGACAGTTGCTTGAA+TGG | + | chr3_1:16950883-16950902 | Msa0351080:CDS | 40.0% | |
| ATGAGACAGTTGCTTGAATG+GGG | + | chr3_1:16950885-16950904 | Msa0351080:CDS | 40.0% | |
| ! | AGTGGCTCCTTATTTCTTGA+AGG | + | chr3_1:16950932-16950951 | Msa0351080:CDS | 40.0% |
| GAAGGAGAAGGAAGAATTGA+AGG | + | chr3_1:16950950-16950969 | Msa0351080:CDS | 40.0% | |
| GAAGGAAGAATTGAAGGGTA+TGG | + | chr3_1:16950956-16950975 | Msa0351080:intron | 40.0% | |
| TAGAGTGGTGACAATGACTT+TGG | + | chr3_1:16951184-16951203 | Msa0351080:intron | 40.0% | |
| TGTACATCTGCTCATATTCC+AGG | - | chr3_1:16951364-16951383 | None:intergenic | 40.0% | |
| AATTAAGCAAGAAAAGCGGG+AGG | - | chr3_1:16951466-16951485 | None:intergenic | 40.0% | |
| TCGTCGAAAACTAAAACCTG+TGG | - | chr3_1:16951562-16951581 | None:intergenic | 40.0% | |
| GGAATAGGATTTACGGGAAA+TGG | + | chr3_1:16951616-16951635 | Msa0351080:intron | 40.0% | |
| !!! | GGTTCCATTGACGTTTTTTC+CGG | - | chr3_1:16951755-16951774 | None:intergenic | 40.0% |
| TCAATACTCAGTAGAATGGC+AGG | - | chr3_1:16951895-16951914 | None:intergenic | 40.0% | |
| CAGAGATCCAACTCATAACA+TGG | - | chr3_1:16951951-16951970 | None:intergenic | 40.0% | |
| GGTAGAAGAATCGTCAACAT+AGG | - | chr3_1:16952008-16952027 | None:intergenic | 40.0% | |
| GACGATTCTTCTACCTTTAG+AGG | + | chr3_1:16952013-16952032 | Msa0351080:intron | 40.0% | |
| !! | AGAGAAAGGGATAATGGGTA+AGG | - | chr3_1:16952220-16952239 | None:intergenic | 40.0% |
| CCCTTTCTCTTTGTAACAGA+AGG | + | chr3_1:16952230-16952249 | Msa0351080:intron | 40.0% | |
| TGAAGACGATCTAGAGATCT+AGG | + | chr3_1:16952589-16952608 | Msa0351080:intron | 40.0% | |
| ! | TTACCGCGTCGTCAATTTTT+GGG | + | chr3_1:16952777-16952796 | Msa0351080:intron | 40.0% |
| TAACCTTCCTCCCTTAGAAA+AGG | + | chr3_1:16952843-16952862 | Msa0351080:intron | 40.0% | |
| !! | CAAAGATCCTTTTCTAAGGG+AGG | - | chr3_1:16952853-16952872 | None:intergenic | 40.0% |
| CTCCCTTAGAAAAGGATCTT+TGG | + | chr3_1:16952851-16952870 | Msa0351080:intron | 40.0% | |
| TTGGCATATATCTTTGGCGT+AGG | + | chr3_1:16952870-16952889 | Msa0351080:intron | 40.0% | |
| TTGGGTTCCTAACAGAAAGA+GGG | + | chr3_1:16952959-16952978 | Msa0351080:three_prime_UTR | 40.0% | |
| AATGAAGAGAGTAGCGATTC+TGG | + | chr3_1:16953031-16953050 | Msa0351080:three_prime_UTR | 40.0% | |
| !! | AATGCCCCATCTACTTTTCA+TGG | - | chr3_1:16953385-16953404 | None:intergenic | 40.0% |
| TGAAGCTACAAACCTCAGAA+TGG | - | chr3_1:16953431-16953450 | None:intergenic | 40.0% | |
| CCACACTCACAACAAAAAAG+AGG | - | chr3_1:16953841-16953860 | None:intergenic | 40.0% | |
| !!! | CCTCTTTTTTGTTGTGAGTG+TGG | + | chr3_1:16953838-16953857 | Msa0351080:intron | 40.0% |
| !!! | CTTTTTTGTTGTGAGTGTGG+TGG | + | chr3_1:16953841-16953860 | Msa0351080:intron | 40.0% |
| GGCAACTGTATGCTACATAT+CGG | - | chr3_1:16953879-16953898 | None:intergenic | 40.0% | |
| ! | AATGTTGAAGATTCTGGGGA+TGG | + | chr3_1:16953984-16954003 | Msa0351080:three_prime_UTR | 40.0% |
| GTCCGAGAGATACCTGTAAA+CGG | - | chr3_1:16949515-16949534 | None:intergenic | 45.0% | |
| CTGTAGACTTCGTAAATGGC+TGG | + | chr3_1:16949637-16949656 | Msa0351080:intron | 45.0% | |
| ! | AAGCCGACACTACTGATTGA+AGG | + | chr3_1:16949782-16949801 | Msa0351080:intron | 45.0% |
| ACGCCTTCAATCAGTAGTGT+CGG | - | chr3_1:16949788-16949807 | None:intergenic | 45.0% | |
| ! | CATGTGTTGGCGATGTATGT+CGG | - | chr3_1:16949813-16949832 | None:intergenic | 45.0% |
| CTATGTGGCAGTGTTATGTC+TGG | + | chr3_1:16949866-16949885 | Msa0351080:intron | 45.0% | |
| CATGCAATAAGATGGGGTGT+TGG | + | chr3_1:16950410-16950429 | Msa0351080:intron | 45.0% | |
| GATAAGGAGTTAGAGGTCCT+GGG | + | chr3_1:16950458-16950477 | Msa0351080:intron | 45.0% | |
| ! | CTTGGTTTGAGTTTGAACCC+AGG | - | chr3_1:16950478-16950497 | None:intergenic | 45.0% |
| CTGGGTTCAAACTCAAACCA+AGG | + | chr3_1:16950476-16950495 | Msa0351080:intron | 45.0% | |
| AGACTGTTTGGGAGAGCTTA+TGG | - | chr3_1:16950535-16950554 | None:intergenic | 45.0% | |
| AGTACGGATGGATGGATAGA+AGG | - | chr3_1:16950606-16950625 | None:intergenic | 45.0% | |
| CTTAATTGTCAGGGCGCAAA+AGG | + | chr3_1:16951479-16951498 | Msa0351080:intron | 45.0% | |
| CGACGAATGTGTTAAGGAGT+TGG | + | chr3_1:16951576-16951595 | Msa0351080:CDS | 45.0% | |
| ! | TGTGTTAAGGAGTTGGTTCC+AGG | + | chr3_1:16951583-16951602 | Msa0351080:CDS | 45.0% |
| AAACTAAGCAGATGCTGAGC+CGG | + | chr3_1:16951733-16951752 | Msa0351080:CDS | 45.0% | |
| TGAGCCGGAAAAAACGTCAA+TGG | + | chr3_1:16951748-16951767 | Msa0351080:CDS | 45.0% | |
| CGTCAATGGAACCCAGAATA+TGG | + | chr3_1:16951762-16951781 | Msa0351080:CDS | 45.0% | |
| TTGTCAATAGCGGTCTAACG+CGG | + | chr3_1:16952267-16952286 | Msa0351080:intron | 45.0% | |
| AGGCAAAAGCGGAACAAAAG+CGG | + | chr3_1:16952355-16952374 | Msa0351080:intron | 45.0% | |
| AAAATTGACGACGCGGTAAG+CGG | - | chr3_1:16952776-16952795 | None:intergenic | 45.0% | |
| ! | CTTACCGCGTCGTCAATTTT+TGG | + | chr3_1:16952776-16952795 | Msa0351080:intron | 45.0% |
| ! | TACCGCGTCGTCAATTTTTG+GGG | + | chr3_1:16952778-16952797 | Msa0351080:intron | 45.0% |
| TAGTTGTCAAAGCGGAAACG+CGG | - | chr3_1:16952817-16952836 | None:intergenic | 45.0% | |
| !! | GATCCTTTTCTAAGGGAGGA+AGG | - | chr3_1:16952849-16952868 | None:intergenic | 45.0% |
| TCTGTTAGGAACCCAAGAGT+TGG | - | chr3_1:16952955-16952974 | None:intergenic | 45.0% | |
| CTTGGGTTCCTAACAGAAAG+AGG | + | chr3_1:16952958-16952977 | Msa0351080:three_prime_UTR | 45.0% | |
| GGTCTATAGTCAATCCGTAG+AGG | - | chr3_1:16953299-16953318 | None:intergenic | 45.0% | |
| GGACTGAGTAACCTATGTAG+AGG | - | chr3_1:16953505-16953524 | None:intergenic | 45.0% | |
| TGAGTCGAAGGACAAATCTG+TGG | - | chr3_1:16953690-16953709 | None:intergenic | 45.0% | |
| TGGCTGCTTCTATACTAGCA+TGG | + | chr3_1:16954137-16954156 | Msa0351080:three_prime_UTR | 45.0% | |
| !! | TTAAATAAAATTACTTATTA+AGG | + | chr3_1:16948445-16948464 | Msa0351080:intron | 5.0% |
| !!! | TAATCTTTATAAAATTTTAA+TGG | + | chr3_1:16948716-16948735 | Msa0351080:intron | 5.0% |
| !!! | GTTAAAAAAAATTATTTTTT+TGG | + | chr3_1:16949213-16949232 | Msa0351080:intron | 5.0% |
| !!! | TATATTTTTTTACAATATAT+TGG | - | chr3_1:16953320-16953339 | None:intergenic | 5.0% |
| TTGAAACCGTCGCCGTTTAC+AGG | + | chr3_1:16949500-16949519 | Msa0351080:intron | 50.0% | |
| GAGATACCTGTAAACGGCGA+CGG | - | chr3_1:16949509-16949528 | None:intergenic | 50.0% | |
| CGCCGTTTACAGGTATCTCT+CGG | + | chr3_1:16949510-16949529 | Msa0351080:intron | 50.0% | |
| CTGTTATCACACACACGTGC+AGG | - | chr3_1:16949594-16949613 | None:intergenic | 50.0% | |
| ACTTCGTAAATGGCTGGCAG+AGG | + | chr3_1:16949643-16949662 | Msa0351080:intron | 50.0% | |
| GACAGGACATACCGTTTGCT+TGG | - | chr3_1:16950251-16950270 | None:intergenic | 50.0% | |
| AGCAAACGGTATGTCCTGTC+TGG | + | chr3_1:16950251-16950270 | Msa0351080:intron | 50.0% | |
| GCAAACGGTATGTCCTGTCT+GGG | + | chr3_1:16950252-16950271 | Msa0351080:intron | 50.0% | |
| AGCTCCGCTTGTACGAGATA+AGG | + | chr3_1:16950435-16950454 | Msa0351080:intron | 50.0% | |
| GCTCCGCTTGTACGAGATAA+GGG | + | chr3_1:16950436-16950455 | Msa0351080:intron | 50.0% | |
| GGATAAGGAGTTAGAGGTCC+TGG | + | chr3_1:16950457-16950476 | Msa0351080:intron | 50.0% | |
| GTTCTCTGCAACCATCTCTC+TGG | + | chr3_1:16950640-16950659 | Msa0351080:intron | 50.0% | |
| AACATGGCTTGACGACTTCC+TGG | + | chr3_1:16951343-16951362 | Msa0351080:intron | 50.0% | |
| CGGGAGGAGCCAGATATTTA+GGG | - | chr3_1:16951450-16951469 | None:intergenic | 50.0% | |
| TACTCGTGATTCTCTGCCAC+AGG | + | chr3_1:16951543-16951562 | Msa0351080:CDS | 50.0% | |
| GGCAAAAGCGGAACAAAAGC+GGG | + | chr3_1:16952356-16952375 | Msa0351080:intron | 50.0% | |
| AAATTGACGACGCGGTAAGC+GGG | - | chr3_1:16952775-16952794 | None:intergenic | 50.0% | |
| CACCCCAAAAATTGACGACG+CGG | - | chr3_1:16952783-16952802 | None:intergenic | 50.0% | |
| CATACTGTTTGCCCGTGTGA+AGG | + | chr3_1:16953621-16953640 | Msa0351080:intron | 50.0% | |
| GCTAGTATAGAAGCAGCCAC+AGG | - | chr3_1:16954136-16954155 | None:intergenic | 50.0% | |
| CACACACACGTGCAGGTTCT+AGG | - | chr3_1:16949587-16949606 | None:intergenic | 55.0% | |
| TCGTAAATGGCTGGCAGAGG+AGG | + | chr3_1:16949646-16949665 | Msa0351080:intron | 55.0% | |
| AAATGGCTGGCAGAGGAGGA+TGG | + | chr3_1:16949650-16949669 | Msa0351080:intron | 55.0% | |
| AATGGCTGGCAGAGGAGGAT+GGG | + | chr3_1:16949651-16949670 | Msa0351080:intron | 55.0% | |
| GCGGGAGGAGCCAGATATTT+AGG | - | chr3_1:16951451-16951470 | None:intergenic | 55.0% | |
| ! | CTTTTGCCTAACGCGCGACT+CGG | - | chr3_1:16952344-16952363 | None:intergenic | 55.0% |
| AGTCGCGCGTTAGGCAAAAG+CGG | + | chr3_1:16952344-16952363 | Msa0351080:intron | 55.0% | |
| GGAACAAAAGCGGGTCAACG+CGG | + | chr3_1:16952365-16952384 | Msa0351080:intron | 55.0% | |
| GAACAAAAGCGGGTCAACGC+GGG | + | chr3_1:16952366-16952385 | Msa0351080:intron | 55.0% | |
| GGGCAAAAAGCGGGTCAATG+CGG | + | chr3_1:16952386-16952405 | Msa0351080:intron | 55.0% | |
| GGGTCAATGCGGCCAAAAAG+CGG | + | chr3_1:16952397-16952416 | Msa0351080:intron | 55.0% | |
| GGTCAATGCGGCCAAAAAGC+GGG | + | chr3_1:16952398-16952417 | Msa0351080:intron | 55.0% | |
| !! | CGCGTCGTCAATTTTTGGGG+TGG | + | chr3_1:16952781-16952800 | Msa0351080:intron | 55.0% |
| GGGAGTAATGTGCGGCATCA+AGG | + | chr3_1:16953775-16953794 | Msa0351080:intron | 55.0% | |
| ATGGCTGGCAGAGGAGGATG+GGG | + | chr3_1:16949652-16949671 | Msa0351080:intron | 60.0% | |
| GGGTCAACGCGGGCAAAAAG+CGG | + | chr3_1:16952376-16952395 | Msa0351080:intron | 60.0% | |
| GGTCAACGCGGGCAAAAAGC+GGG | + | chr3_1:16952377-16952396 | Msa0351080:intron | 60.0% | |
| GGCCAAAAAGCGGGTCAACG+CGG | + | chr3_1:16952407-16952426 | Msa0351080:intron | 60.0% | |
| GCCAAAAAGCGGGTCAACGC+GGG | + | chr3_1:16952408-16952427 | Msa0351080:intron | 60.0% | |
| GGGTCAACGCGGGCAAAAAG+CGG | + | chr3_1:16952376-16952395 | Msa0351080:intron | 60.0% | |
| GGTCAACGCGGGCAAAAAGC+GGG | + | chr3_1:16952377-16952396 | Msa0351080:intron | 60.0% | |
| ! | GCGGGCGCTTTTACATGACG+CGG | - | chr3_1:16952746-16952765 | None:intergenic | 60.0% |
| CTGGCAGAGGAGGATGGGGA+CGG | + | chr3_1:16949656-16949675 | Msa0351080:intron | 65.0% | |
| TGGCAGAGGAGGATGGGGAC+GGG | + | chr3_1:16949657-16949676 | Msa0351080:intron | 65.0% | |
| !! | GCCCGCGTTGACCCGCTTTT+TGG | - | chr3_1:16952370-16952389 | None:intergenic | 65.0% |
| GTCAAAGCGGAAACGCGGCG+CGG | - | chr3_1:16952812-16952831 | None:intergenic | 65.0% | |
| GGCAGAGGAGGATGGGGACG+GGG | + | chr3_1:16949658-16949677 | Msa0351080:intron | 70.0% | |
| TGGGGACGGGGACGAGGAAG+AGG | + | chr3_1:16949670-16949689 | Msa0351080:intron | 70.0% | |
| GGTCTAACGCGGCGCGATCG+CGG | + | chr3_1:16952278-16952297 | Msa0351080:intron | 70.0% | |
| CGGTCGCGTTCTGACGCGCT+AGG | - | chr3_1:16952324-16952343 | None:intergenic | 70.0% | |
| ACGCGACCGAGTCGCGCGTT+AGG | + | chr3_1:16952335-16952354 | Msa0351080:intron | 70.0% | |
| GGAGGATGGGGACGGGGACG+AGG | + | chr3_1:16949664-16949683 | Msa0351080:intron | 75.0% | |
| AACGCGGCGCGATCGCGGCA+CGG | + | chr3_1:16952283-16952302 | Msa0351080:intron | 75.0% | |
| ! | GCGGTAAGCGGGCGCGACGC+GGG | - | chr3_1:16952764-16952783 | None:intergenic | 80.0% |
| ! | CGCGGTAAGCGGGCGCGACG+CGG | - | chr3_1:16952765-16952784 | None:intergenic | 80.0% |
| ! | AGCGGAAACGCGGCGCGGCG+CGG | - | chr3_1:16952807-16952826 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 16948072 | 16954253 | 16948072 | ID=Msa0351080;Name=Msa0351080 |
| chr3_1 | mRNA | 16948072 | 16954253 | 16948072 | ID=Msa0351080-mRNA-1;Parent=Msa0351080;Name=Msa0351080-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.83|0.71|0.85|0.5|0.42|7|326|110 |
| chr3_1 | exon | 16948072 | 16948077 | 16948072 | ID=Msa0351080-mRNA-1:exon:4076;Parent=Msa0351080-mRNA-1 |
| chr3_1 | exon | 16950840 | 16950972 | 16950840 | ID=Msa0351080-mRNA-1:exon:4077;Parent=Msa0351080-mRNA-1 |
| chr3_1 | exon | 16951491 | 16951604 | 16951491 | ID=Msa0351080-mRNA-1:exon:4078;Parent=Msa0351080-mRNA-1 |
| chr3_1 | exon | 16951730 | 16951788 | 16951730 | ID=Msa0351080-mRNA-1:exon:4079;Parent=Msa0351080-mRNA-1 |
| chr3_1 | exon | 16952928 | 16953072 | 16952928 | ID=Msa0351080-mRNA-1:exon:4080;Parent=Msa0351080-mRNA-1 |
| chr3_1 | exon | 16953957 | 16954005 | 16953957 | ID=Msa0351080-mRNA-1:exon:4081;Parent=Msa0351080-mRNA-1 |
| chr3_1 | exon | 16954101 | 16954253 | 16954101 | ID=Msa0351080-mRNA-1:exon:4082;Parent=Msa0351080-mRNA-1 |
| chr3_1 | CDS | 16948072 | 16948077 | 16948072 | ID=Msa0351080-mRNA-1:cds;Parent=Msa0351080-mRNA-1 |
| chr3_1 | CDS | 16950840 | 16950972 | 16950840 | ID=Msa0351080-mRNA-1:cds;Parent=Msa0351080-mRNA-1 |
| chr3_1 | CDS | 16951491 | 16951604 | 16951491 | ID=Msa0351080-mRNA-1:cds;Parent=Msa0351080-mRNA-1 |
| chr3_1 | CDS | 16951730 | 16951788 | 16951730 | ID=Msa0351080-mRNA-1:cds;Parent=Msa0351080-mRNA-1 |
| chr3_1 | CDS | 16952928 | 16952948 | 16952928 | ID=Msa0351080-mRNA-1:cds;Parent=Msa0351080-mRNA-1 |
| chr3_1 | three_prime_UTR | 16952949 | 16953072 | 16952949 | ID=Msa0351080-mRNA-1:three_prime_utr;Parent=Msa0351080-mRNA-1 |
| chr3_1 | three_prime_UTR | 16953957 | 16954005 | 16953957 | ID=Msa0351080-mRNA-1:three_prime_utr;Parent=Msa0351080-mRNA-1 |
| chr3_1 | three_prime_UTR | 16954101 | 16954253 | 16954101 | ID=Msa0351080-mRNA-1:three_prime_utr;Parent=Msa0351080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
