Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0435390 | XP_024635119.1 | 96.371 | 248 | 9 | 0 | 1 | 248 | 117 | 364 | 3.79e-167 | 476 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0435390 | sp|F1DLK1|DSE1_NICBE | 68.807 | 218 | 67 | 1 | 32 | 248 | 158 | 375 | 3.82e-110 | 325 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0435390 | G7J4P6 | 96.371 | 248 | 9 | 0 | 1 | 248 | 117 | 364 | 1.81e-167 | 476 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0015390 | Msa0435390 | 0.816558 | 5.198670e-52 | -8.615850e-47 |
Msa0015400 | Msa0435390 | 0.809648 | 1.705952e-50 | -8.615850e-47 |
Msa0017510 | Msa0435390 | 0.834220 | 3.398685e-56 | -8.615850e-47 |
Msa0028640 | Msa0435390 | 0.814505 | 1.489018e-51 | -8.615850e-47 |
Msa0029310 | Msa0435390 | 0.811147 | 8.096894e-51 | -8.615850e-47 |
Msa0031340 | Msa0435390 | 0.817448 | 3.280961e-52 | -8.615850e-47 |
Msa0036140 | Msa0435390 | 0.800543 | 1.371891e-48 | -8.615850e-47 |
Msa0045790 | Msa0435390 | 0.816731 | 4.754811e-52 | -8.615850e-47 |
Msa0046160 | Msa0435390 | 0.819730 | 9.961987e-53 | -8.615850e-47 |
Msa0050390 | Msa0435390 | 0.810225 | 1.281185e-50 | -8.615850e-47 |
Msa0089630 | Msa0435390 | 0.821261 | 4.436304e-53 | -8.615850e-47 |
Msa0101700 | Msa0435390 | 0.818652 | 1.752766e-52 | -8.615850e-47 |
Msa0110970 | Msa0435390 | 0.802958 | 4.380962e-49 | -8.615850e-47 |
Msa0114060 | Msa0435390 | 0.804690 | 1.914185e-49 | -8.615850e-47 |
Msa0119960 | Msa0435390 | 0.800710 | 1.268481e-48 | -8.615850e-47 |
Msa0122590 | Msa0435390 | 0.802012 | 6.865478e-49 | -8.615850e-47 |
Msa0140780 | Msa0435390 | 0.810452 | 1.144511e-50 | -8.615850e-47 |
Msa0141620 | Msa0435390 | 0.802459 | 5.554044e-49 | -8.615850e-47 |
Msa0145440 | Msa0435390 | 0.823058 | 1.698776e-53 | -8.615850e-47 |
Msa0157290 | Msa0435390 | 0.834773 | 2.468829e-56 | -8.615850e-47 |
Msa0159930 | Msa0435390 | 0.800621 | 1.322637e-48 | -8.615850e-47 |
Msa0160550 | Msa0435390 | 0.800604 | 1.333498e-48 | -8.615850e-47 |
Msa0165210 | Msa0435390 | 0.812646 | 3.818115e-51 | -8.615850e-47 |
Msa0166870 | Msa0435390 | 0.824664 | 7.139639e-54 | -8.615850e-47 |
Msa0168500 | Msa0435390 | 0.805713 | 1.168778e-49 | -8.615850e-47 |
Msa0171290 | Msa0435390 | 0.805424 | 1.343699e-49 | -8.615850e-47 |
Msa0171300 | Msa0435390 | 0.837460 | 5.130163e-57 | -8.615850e-47 |
Msa0175780 | Msa0435390 | 0.804680 | 1.923495e-49 | -8.615850e-47 |
Msa0178960 | Msa0435390 | 0.814975 | 1.171413e-51 | -8.615850e-47 |
Msa0179280 | Msa0435390 | 0.800082 | 1.702796e-48 | -8.615850e-47 |
Msa0197660 | Msa0435390 | 0.815481 | 9.041978e-52 | -8.615850e-47 |
Msa0200260 | Msa0435390 | 0.802335 | 5.892014e-49 | -8.615850e-47 |
Msa0211150 | Msa0435390 | 0.811765 | 5.943978e-51 | -8.615850e-47 |
Msa0212990 | Msa0435390 | 0.811374 | 7.230131e-51 | -8.615850e-47 |
Msa0220580 | Msa0435390 | 0.809183 | 2.145577e-50 | -8.615850e-47 |
Msa0220740 | Msa0435390 | 0.801314 | 9.545299e-49 | -8.615850e-47 |
Msa0223690 | Msa0435390 | 0.805483 | 1.306334e-49 | -8.615850e-47 |
Msa0226890 | Msa0435390 | 0.805534 | 1.274303e-49 | -8.615850e-47 |
Msa0233300 | Msa0435390 | 0.800707 | 1.270507e-48 | -8.615850e-47 |
Msa0366240 | Msa0435390 | 0.849236 | 3.681546e-60 | -8.615850e-47 |
Msa0376350 | Msa0435390 | 0.807910 | 4.012999e-50 | -8.615850e-47 |
Msa0376590 | Msa0435390 | 0.803979 | 2.691600e-49 | -8.615850e-47 |
Msa0379640 | Msa0435390 | 0.805674 | 1.190883e-49 | -8.615850e-47 |
Msa0388960 | Msa0435390 | 0.842501 | 2.488878e-58 | -8.615850e-47 |
Msa0393080 | Msa0435390 | 0.811201 | 7.882527e-51 | -8.615850e-47 |
Msa0395790 | Msa0435390 | 0.809332 | 1.993731e-50 | -8.615850e-47 |
Msa0397750 | Msa0435390 | 0.808842 | 2.538326e-50 | -8.615850e-47 |
Msa0398710 | Msa0435390 | 0.806764 | 7.021634e-50 | -8.615850e-47 |
Msa0410650 | Msa0435390 | 0.824243 | 8.971739e-54 | -8.615850e-47 |
Msa0417270 | Msa0435390 | 0.816410 | 5.609970e-52 | -8.615850e-47 |
Msa0419820 | Msa0435390 | 0.803495 | 3.391669e-49 | -8.615850e-47 |
Msa0424790 | Msa0435390 | 0.810856 | 9.361259e-51 | -8.615850e-47 |
Msa0426640 | Msa0435390 | 0.807880 | 4.072980e-50 | -8.615850e-47 |
Msa0428590 | Msa0435390 | 0.826327 | 2.883045e-54 | -8.615850e-47 |
Msa0428930 | Msa0435390 | 0.811600 | 6.455750e-51 | -8.615850e-47 |
Msa0435390 | Msa0435400 | 0.978975 | 5.806755e-147 | -8.615850e-47 |
Msa0435390 | Msa0437560 | 0.802361 | 5.817909e-49 | -8.615850e-47 |
Msa0435390 | Msa0440750 | 0.829904 | 3.964143e-55 | -8.615850e-47 |
Msa0435390 | Msa0453000 | 0.805986 | 1.024010e-49 | -8.615850e-47 |
Msa0435390 | Msa0466390 | 0.825015 | 5.900726e-54 | -8.615850e-47 |
Msa0435390 | Msa0467060 | 0.804503 | 2.093321e-49 | -8.615850e-47 |
Msa0435390 | Msa0484780 | 0.818723 | 1.688659e-52 | -8.615850e-47 |
Msa0435390 | Msa0495320 | 0.822175 | 2.726577e-53 | -8.615850e-47 |
Msa0435390 | Msa0495330 | 0.826966 | 2.029575e-54 | -8.615850e-47 |
Msa0435390 | Msa0502100 | 0.808045 | 3.756395e-50 | -8.615850e-47 |
Msa0435390 | Msa0507680 | 0.822770 | 1.983416e-53 | -8.615850e-47 |
Msa0435390 | Msa0509610 | 0.805828 | 1.105411e-49 | -8.615850e-47 |
Msa0435390 | Msa0512750 | 0.822066 | 2.889345e-53 | -8.615850e-47 |
Msa0435390 | Msa0512900 | 0.803296 | 3.730129e-49 | -8.615850e-47 |
Msa0435390 | Msa0515010 | 0.812708 | 3.700969e-51 | -8.615850e-47 |
Msa0435390 | Msa0516170 | 0.813735 | 2.201678e-51 | -8.615850e-47 |
Msa0435390 | Msa0516440 | 0.805083 | 1.584087e-49 | -8.615850e-47 |
Msa0435390 | Msa0523460 | 0.824554 | 7.581349e-54 | -8.615850e-47 |
Msa0435390 | Msa0529890 | 0.801933 | 7.127025e-49 | -8.615850e-47 |
Msa0435390 | Msa0546680 | 0.800616 | 1.325462e-48 | -8.615850e-47 |
Msa0435390 | Msa0547890 | 0.806915 | 6.521844e-50 | -8.615850e-47 |
Msa0435390 | Msa0554050 | 0.820922 | 5.310011e-53 | -8.615850e-47 |
Msa0435390 | Msa0576880 | 0.819356 | 1.212258e-52 | -8.615850e-47 |
Msa0435390 | Msa0577500 | 0.801991 | 6.932062e-49 | -8.615850e-47 |
Msa0435390 | Msa0578860 | 0.818251 | 2.160485e-52 | -8.615850e-47 |
Msa0435390 | Msa0584860 | 0.808185 | 3.506636e-50 | -8.615850e-47 |
Msa0435390 | Msa0593650 | 0.820220 | 7.693653e-53 | -8.615850e-47 |
Msa0435390 | Msa0602240 | 0.822774 | 1.978454e-53 | -8.615850e-47 |
Msa0435390 | Msa0602250 | 0.827563 | 1.459748e-54 | -8.615850e-47 |
Msa0435390 | Msa0610430 | 0.818333 | 2.071016e-52 | -8.615850e-47 |
Msa0435390 | Msa0616160 | 0.807012 | 6.221063e-50 | -8.615850e-47 |
Msa0435390 | Msa0623080 | 0.805789 | 1.126537e-49 | -8.615850e-47 |
Msa0435390 | Msa0626410 | 0.820948 | 5.236551e-53 | -8.615850e-47 |
Msa0435390 | Msa0630720 | 0.827395 | 1.602338e-54 | -8.615850e-47 |
Msa0435390 | Msa0638070 | 0.804046 | 2.606522e-49 | -8.615850e-47 |
Msa0435390 | Msa0657970 | 0.823698 | 1.204277e-53 | -8.615850e-47 |
Msa0435390 | Msa0658570 | 0.808084 | 3.684668e-50 | -8.615850e-47 |
Msa0435390 | Msa0663380 | 0.805344 | 1.396729e-49 | -8.615850e-47 |
Msa0435390 | Msa0663390 | 0.801338 | 9.437425e-49 | -8.615850e-47 |
Msa0435390 | Msa0667050 | 0.801545 | 8.559330e-49 | -8.615850e-47 |
Msa0435390 | Msa0669320 | 0.807149 | 5.821025e-50 | -8.615850e-47 |
Msa0435390 | Msa0672570 | 0.801875 | 7.325472e-49 | -8.615850e-47 |
Msa0435390 | Msa0673450 | 0.803645 | 3.158082e-49 | -8.615850e-47 |
Msa0435390 | Msa0673460 | 0.823162 | 1.606824e-53 | -8.615850e-47 |
Msa0435390 | Msa0677410 | 0.816231 | 6.152544e-52 | -8.615850e-47 |
Msa0435390 | Msa0682330 | 0.805305 | 1.423121e-49 | -8.615850e-47 |
Msa0435390 | Msa0682620 | 0.802522 | 5.392093e-49 | -8.615850e-47 |
Msa0435390 | Msa0690520 | 0.800076 | 1.707936e-48 | -8.615850e-47 |
Msa0435390 | Msa0691010 | 0.800683 | 1.284937e-48 | -8.615850e-47 |
Msa0435390 | Msa0692950 | 0.800545 | 1.370840e-48 | -8.615850e-47 |
Msa0435390 | Msa0693380 | 0.816259 | 6.065330e-52 | -8.615850e-47 |
Msa0435390 | Msa0695100 | 0.801740 | 7.807695e-49 | -8.615850e-47 |
Msa0435390 | Msa0696450 | 0.807998 | 3.843161e-50 | -8.615850e-47 |
Msa0435390 | Msa0696640 | 0.809611 | 1.737168e-50 | -8.615850e-47 |
Msa0435390 | Msa0703050 | 0.824205 | 9.157436e-54 | -8.615850e-47 |
Msa0435390 | Msa0708520 | 0.800565 | 1.358048e-48 | -8.615850e-47 |
Msa0435390 | Msa0731940 | 0.802501 | 5.445858e-49 | -8.615850e-47 |
Msa0435390 | Msa0735170 | 0.837745 | 4.336660e-57 | -8.615850e-47 |
Msa0435390 | Msa0742380 | 0.809725 | 1.641754e-50 | -8.615850e-47 |
Msa0435390 | Msa0743720 | 0.808483 | 3.029236e-50 | -8.615850e-47 |
Msa0435390 | Msa0745790 | 0.800386 | 1.476810e-48 | -8.615850e-47 |
Msa0435390 | Msa0749290 | 0.810307 | 1.230229e-50 | -8.615850e-47 |
Msa0435390 | Msa0762970 | 0.807627 | 4.608888e-50 | -8.615850e-47 |
Msa0435390 | Msa0767300 | 0.822944 | 1.806501e-53 | -8.615850e-47 |
Msa0435390 | Msa0801760 | 0.803232 | 3.845009e-49 | -8.615850e-47 |
Msa0435390 | Msa0813200 | 0.808504 | 2.998460e-50 | -8.615850e-47 |
Msa0435390 | Msa0820770 | 0.801180 | 1.016897e-48 | -8.615850e-47 |
Msa0435390 | Msa0825340 | 0.810449 | 1.146185e-50 | -8.615850e-47 |
Msa0435390 | Msa0835800 | 0.804484 | 2.113042e-49 | -8.615850e-47 |
Msa0435390 | Msa0838580 | 0.807816 | 4.200890e-50 | -8.615850e-47 |
Msa0435390 | Msa0871270 | 0.818446 | 1.951994e-52 | -8.615850e-47 |
Msa0435390 | Msa0876190 | 0.800737 | 1.252223e-48 | -8.615850e-47 |
Msa0435390 | Msa0880140 | 0.832179 | 1.095435e-55 | -8.615850e-47 |
Msa0435390 | Msa0880950 | 0.810890 | 9.203582e-51 | -8.615850e-47 |
Msa0435390 | Msa0885280 | 0.807141 | 5.841961e-50 | -8.615850e-47 |
Msa0435390 | Msa0893950 | 0.805878 | 1.078987e-49 | -8.615850e-47 |
Msa0435390 | Msa0896750 | 0.825805 | 3.836923e-54 | -8.615850e-47 |
Msa0435390 | Msa0907070 | 0.820441 | 6.847999e-53 | -8.615850e-47 |
Msa0435390 | Msa0908050 | 0.813082 | 3.064469e-51 | -8.615850e-47 |
Msa0435390 | Msa0923330 | 0.809938 | 1.477610e-50 | -8.615850e-47 |
Msa0435390 | Msa0937670 | 0.801033 | 1.089620e-48 | -8.615850e-47 |
Msa0435390 | Msa0938220 | 0.825017 | 5.894208e-54 | -8.615850e-47 |
Msa0435390 | Msa0947660 | 0.811064 | 8.440108e-51 | -8.615850e-47 |
Msa0435390 | Msa0954550 | 0.802622 | 5.141889e-49 | -8.615850e-47 |
Msa0435390 | Msa0969520 | 0.834839 | 2.376674e-56 | -8.615850e-47 |
Msa0435390 | Msa0975340 | 0.803262 | 3.791167e-49 | -8.615850e-47 |
Msa0435390 | Msa0993290 | 0.820297 | 7.388885e-53 | -8.615850e-47 |
Msa0435390 | Msa0993600 | 0.819333 | 1.227429e-52 | -8.615850e-47 |
Msa0435390 | Msa1003620 | 0.800962 | 1.126761e-48 | -8.615850e-47 |
Msa0435390 | Msa1014540 | 0.822429 | 2.380816e-53 | -8.615850e-47 |
Msa0435390 | Msa1019000 | 0.804690 | 1.914185e-49 | -8.615850e-47 |
Msa0435390 | Msa1030970 | 0.828024 | 1.131354e-54 | -8.615850e-47 |
Msa0435390 | Msa1046300 | 0.813447 | 2.547747e-51 | -8.615850e-47 |
Msa0435390 | Msa1075220 | -0.824022 | 1.010991e-53 | -8.615850e-47 |
Msa0435390 | Msa1075540 | 0.814345 | 1.615525e-51 | -8.615850e-47 |
Msa0435390 | Msa1082500 | 0.834907 | 2.284893e-56 | -8.615850e-47 |
Msa0435390 | Msa1085200 | 0.825784 | 3.880935e-54 | -8.615850e-47 |
Msa0435390 | Msa1090260 | 0.817265 | 3.606987e-52 | -8.615850e-47 |
Msa0435390 | Msa1100050 | 0.807383 | 5.191072e-50 | -8.615850e-47 |
Msa0435390 | Msa1108160 | 0.802744 | 4.850198e-49 | -8.615850e-47 |
Msa0435390 | Msa1116130 | -0.813570 | 2.394134e-51 | -8.615850e-47 |
Msa0435390 | Msa1119480 | 0.803615 | 3.203896e-49 | -8.615850e-47 |
Msa0435390 | Msa1131220 | 0.822372 | 2.453352e-53 | -8.615850e-47 |
Msa0435390 | Msa1137570 | 0.809361 | 1.965091e-50 | -8.615850e-47 |
Msa0435390 | Msa1139000 | -0.804219 | 2.399574e-49 | -8.615850e-47 |
Msa0435390 | Msa1151910 | 0.834437 | 2.998932e-56 | -8.615850e-47 |
Msa0435390 | Msa1162550 | -0.821944 | 3.083919e-53 | -8.615850e-47 |
Msa0435390 | Msa1168160 | 0.818578 | 1.821850e-52 | -8.615850e-47 |
Msa0435390 | Msa1172670 | 0.806146 | 9.479555e-50 | -8.615850e-47 |
Msa0435390 | Msa1174040 | 0.808718 | 2.699144e-50 | -8.615850e-47 |
Msa0435390 | Msa1190400 | 0.819662 | 1.032725e-52 | -8.615850e-47 |
Msa0435390 | Msa1199570 | 0.828537 | 8.508454e-55 | -8.615850e-47 |
Msa0435390 | Msa1205130 | 0.805255 | 1.457776e-49 | -8.615850e-47 |
Msa0435390 | Msa1207220 | 0.810092 | 1.368708e-50 | -8.615850e-47 |
Msa0435390 | Msa1212940 | 0.822763 | 1.990137e-53 | -8.615850e-47 |
Msa0435390 | Msa1214890 | 0.807751 | 4.337936e-50 | -8.615850e-47 |
Msa0435390 | Msa1226660 | 0.805729 | 1.159898e-49 | -8.615850e-47 |
Msa0435390 | Msa1228210 | 0.805101 | 1.570079e-49 | -8.615850e-47 |
Msa0435390 | Msa1233890 | 0.808618 | 2.834712e-50 | -8.615850e-47 |
Msa0435390 | Msa1238930 | 0.814540 | 1.462418e-51 | -8.615850e-47 |
Msa0435390 | Msa1242220 | 0.810322 | 1.220780e-50 | -8.615850e-47 |
Msa0435390 | Msa1244250 | 0.830796 | 2.399575e-55 | -8.615850e-47 |
Msa0435390 | Msa1244610 | 0.806737 | 7.112819e-50 | -8.615850e-47 |
Msa0435390 | Msa1249490 | 0.800780 | 1.227213e-48 | -8.615850e-47 |
Msa0435390 | Msa1270610 | 0.812948 | 3.279370e-51 | -8.615850e-47 |
Msa0435390 | Msa1277660 | 0.812885 | 3.384706e-51 | -8.615850e-47 |
Msa0435390 | Msa1283860 | 0.838196 | 3.320129e-57 | -8.615850e-47 |
Msa0435390 | Msa1284680 | 0.819664 | 1.031143e-52 | -8.615850e-47 |
Msa0435390 | Msa1300490 | 0.814307 | 1.646721e-51 | -8.615850e-47 |
Msa0435390 | Msa1305340 | 0.812150 | 4.900457e-51 | -8.615850e-47 |
Msa0435390 | Msa1306840 | 0.800103 | 1.685976e-48 | -8.615850e-47 |
Msa0435390 | Msa1308380 | 0.824832 | 6.516776e-54 | -8.615850e-47 |
Msa0435390 | Msa1313150 | 0.831954 | 1.245124e-55 | -8.615850e-47 |
Msa0435390 | Msa1314170 | 0.806210 | 9.186753e-50 | -8.615850e-47 |
Msa0435390 | Msa1318990 | 0.809455 | 1.876451e-50 | -8.615850e-47 |
Msa0435390 | Msa1322890 | 0.811913 | 5.519139e-51 | -8.615850e-47 |
Msa0435390 | Msa1328710 | 0.832099 | 1.146587e-55 | -8.615850e-47 |
Msa0435390 | Msa1331000 | 0.806403 | 8.368272e-50 | -8.615850e-47 |
Msa0435390 | Msa1336710 | 0.817927 | 2.557629e-52 | -8.615850e-47 |
Msa0435390 | Msa1340650 | 0.830337 | 3.108387e-55 | -8.615850e-47 |
Msa0435390 | Msa1346370 | 0.805408 | 1.354352e-49 | -8.615850e-47 |
Msa0435390 | Msa1351620 | 0.816759 | 4.687113e-52 | -8.615850e-47 |
Msa0435390 | Msa1359040 | 0.835888 | 1.291081e-56 | -8.615850e-47 |
Msa0435390 | Msa1372760 | 0.827747 | 1.318927e-54 | -8.615850e-47 |
Msa0435390 | Msa1376890 | 0.807325 | 5.340322e-50 | -8.615850e-47 |
Msa0435390 | Msa1384350 | 0.806547 | 7.800389e-50 | -8.615850e-47 |
Msa0435390 | Msa1392260 | 0.806876 | 6.648107e-50 | -8.615850e-47 |
Msa0435390 | Msa1409700 | 0.814071 | 1.856698e-51 | -8.615850e-47 |
Msa0435390 | Msa1409870 | 0.837722 | 4.394077e-57 | -8.615850e-47 |
Msa0435390 | Msa1423880 | 0.827300 | 1.688284e-54 | -8.615850e-47 |
Msa0435390 | Msa1424750 | 0.820850 | 5.516782e-53 | -8.615850e-47 |
Msa0435390 | Msa1436480 | 0.821810 | 3.311909e-53 | -8.615850e-47 |
Msa0435390 | Msa1445610 | -0.806690 | 7.276232e-50 | -8.615850e-47 |
Msa0435390 | Msa1452240 | 0.826554 | 2.546003e-54 | -8.615850e-47 |
Msa0435390 | Msa1460020 | 0.827711 | 1.344972e-54 | -8.615850e-47 |
Msa0435390 | Msa1461300 | 0.803897 | 2.799969e-49 | -8.615850e-47 |
Msa0435390 | Msa1464810 | 0.803516 | 3.358966e-49 | -8.615850e-47 |
Msa0435390 | Msa1464940 | 0.807471 | 4.974564e-50 | -8.615850e-47 |
Msa0239800 | Msa0435390 | 0.812900 | 3.359894e-51 | -8.615850e-47 |
Msa0243100 | Msa0435390 | 0.818978 | 1.478187e-52 | -8.615850e-47 |
Msa0244810 | Msa0435390 | 0.801043 | 1.084506e-48 | -8.615850e-47 |
Msa0244860 | Msa0435390 | 0.826322 | 2.890756e-54 | -8.615850e-47 |
Msa0262510 | Msa0435390 | 0.807597 | 4.677683e-50 | -8.615850e-47 |
Msa0264150 | Msa0435390 | 0.802083 | 6.637736e-49 | -8.615850e-47 |
Msa0270270 | Msa0435390 | 0.801651 | 8.141346e-49 | -8.615850e-47 |
Msa0277820 | Msa0435390 | 0.803812 | 2.915727e-49 | -8.615850e-47 |
Msa0280090 | Msa0435390 | 0.805967 | 1.033515e-49 | -8.615850e-47 |
Msa0282250 | Msa0435390 | 0.828541 | 8.490553e-55 | -8.615850e-47 |
Msa0283450 | Msa0435390 | 0.834988 | 2.179311e-56 | -8.615850e-47 |
Msa0283520 | Msa0435390 | 0.812809 | 3.516280e-51 | -8.615850e-47 |
Msa0287650 | Msa0435390 | 0.815768 | 7.807313e-52 | -8.615850e-47 |
Msa0317510 | Msa0435390 | 0.824651 | 7.191254e-54 | -8.615850e-47 |
Msa0330340 | Msa0435390 | 0.801867 | 7.351768e-49 | -8.615850e-47 |
Msa0332000 | Msa0435390 | 0.818274 | 2.134722e-52 | -8.615850e-47 |
Msa0338110 | Msa0435390 | 0.815489 | 9.007754e-52 | -8.615850e-47 |
Msa0340450 | Msa0435390 | 0.807856 | 4.120958e-50 | -8.615850e-47 |
Msa0345970 | Msa0435390 | 0.840988 | 6.238504e-58 | -8.615850e-47 |
Msa0350990 | Msa0435390 | 0.807808 | 4.217914e-50 | -8.615850e-47 |
Msa0351030 | Msa0435390 | 0.803689 | 3.092431e-49 | -8.615850e-47 |
Msa0364000 | Msa0435390 | 0.802904 | 4.496187e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0435390 | MtrunA17_Chr3g0142331 | 86.282 | 277 | 9 | 1 | 1 | 248 | 117 | 393 | 1.15e-164 | 461 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0435390 | AT4G29860.1 | 64.977 | 217 | 74 | 1 | 32 | 246 | 166 | 382 | 2.88e-105 | 310 |
Find 69 sgRNAs with CRISPR-Local
Find 421 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTGTTTAAGGTTGAAATT+TGG | 0.157257 | 3_2:-88535702 | Msa0435390:intron |
TGATATTAGTATGATGTATT+AGG | 0.234191 | 3_2:-88530378 | Msa0435390:three_prime_UTR |
ACACGTCTCCCTTCAAATAT+TGG | 0.280177 | 3_2:-88535655 | Msa0435390:CDS |
CTATCATATGTGGCTTTGTC+GGG | 0.310446 | 3_2:-88535813 | Msa0435390:CDS |
TGGAATTTCACAGAACTTAC+TGG | 0.315860 | 3_2:+88532162 | None:intergenic |
TATGAGCCTCTTCTGTTTCA+AGG | 0.331258 | 3_2:+88536590 | None:intergenic |
ATTGTTTAAGGTTGAAATTT+GGG | 0.336934 | 3_2:-88535701 | Msa0435390:intron |
TTCGTCTGATTGTAAACTTA+TGG | 0.343925 | 3_2:-88530457 | Msa0435390:CDS |
TCATACTAATATCATGTTCT+TGG | 0.349256 | 3_2:+88530387 | None:intergenic |
CAACTGCTGGCTGGGACCAC+AGG | 0.361390 | 3_2:-88531058 | Msa0435390:intron |
GGCAAAATTGCTGCAACTGC+TGG | 0.372442 | 3_2:-88531071 | Msa0435390:CDS |
GATATTAGTATGATGTATTA+GGG | 0.415849 | 3_2:-88530377 | Msa0435390:three_prime_UTR |
GCTATCATATGTGGCTTTGT+CGG | 0.422647 | 3_2:-88535814 | Msa0435390:CDS |
AAATTGCTGCAACTGCTGGC+TGG | 0.431609 | 3_2:-88531067 | Msa0435390:CDS |
TTGGAGCGACCTGGCATCTC+AGG | 0.432105 | 3_2:-88531113 | Msa0435390:CDS |
CAGCTAAGGCGTTTCCTTTG+CGG | 0.433322 | 3_2:+88530653 | None:intergenic |
GTGAAATTCCATTCTGAGCC+AGG | 0.437622 | 3_2:-88532150 | Msa0435390:intron |
TGGTGGGATGTACGGAATCC+TGG | 0.454971 | 3_2:-88532189 | Msa0435390:CDS |
CAGAGTACGGGGTCAAAAGC+AGG | 0.457854 | 3_2:-88536631 | Msa0435390:CDS |
AGTTGTTCTGAAAGCTCTGA+AGG | 0.466718 | 3_2:-88536559 | Msa0435390:intron |
AATTGCTGCAACTGCTGGCT+GGG | 0.467224 | 3_2:-88531066 | Msa0435390:CDS |
GTACAGCTTGGATCATTCTT+CGG | 0.473747 | 3_2:-88531976 | Msa0435390:intron |
TACTAATATCATGTTCTTGG+AGG | 0.491008 | 3_2:+88530390 | None:intergenic |
TCTTCAATTGTTAGCAGCAA+AGG | 0.493130 | 3_2:-88535625 | Msa0435390:intron |
CCATGCTTTGGTGGGATGTA+CGG | 0.494219 | 3_2:-88532197 | Msa0435390:CDS |
GTATTGACGGATCTTGCAAA+GGG | 0.501644 | 3_2:-88532034 | Msa0435390:CDS |
GAGTTACTACCAATATTTGA+AGG | 0.504307 | 3_2:+88535646 | None:intergenic |
GGCATCTCAATTCGGCCTGA+TGG | 0.506609 | 3_2:-88531092 | Msa0435390:CDS |
ACAGAACTTACTGGAACTCC+AGG | 0.506661 | 3_2:+88532171 | None:intergenic |
ATGAAGATGGTACCATGCTT+TGG | 0.521156 | 3_2:-88532209 | Msa0435390:CDS |
GCATCTCAGGCATCTCAATT+CGG | 0.527846 | 3_2:-88531100 | Msa0435390:CDS |
CATGGCTAAGAATCAGAGTA+CGG | 0.527885 | 3_2:-88536644 | Msa0435390:CDS |
CAATTAAGGGCTATCATATG+TGG | 0.530557 | 3_2:-88535823 | Msa0435390:intron |
TATCATATGTGGCTTTGTCG+GGG | 0.531270 | 3_2:-88535812 | Msa0435390:CDS |
GTTCTGAGCATTGGTATTGA+CGG | 0.538890 | 3_2:-88532047 | Msa0435390:CDS |
ATTGAGATGCCTGAGATGCC+AGG | 0.543183 | 3_2:+88531104 | None:intergenic |
ATGGCTAAGAATCAGAGTAC+GGG | 0.543954 | 3_2:-88536643 | Msa0435390:CDS |
TGCATCTGCCGACACAATGG+TGG | 0.557660 | 3_2:-88530430 | Msa0435390:CDS |
GGTATTGACGGATCTTGCAA+AGG | 0.560279 | 3_2:-88532035 | Msa0435390:CDS |
CGACACAATGGTGGCGCTGT+GGG | 0.564576 | 3_2:-88530421 | Msa0435390:CDS |
TGTCGATACCTGGCTCAGAA+TGG | 0.564737 | 3_2:+88532142 | None:intergenic |
ATGATACTTAAGTACAGCTA+AGG | 0.567428 | 3_2:+88530639 | None:intergenic |
AGGATATATAATTACCGCAA+AGG | 0.569818 | 3_2:-88530667 | Msa0435390:CDS |
AGAGTACGGGGTCAAAAGCA+GGG | 0.576846 | 3_2:-88536630 | Msa0435390:CDS |
GAAATCACATTGGAGCGACC+TGG | 0.577804 | 3_2:-88531122 | Msa0435390:CDS |
CTCTGCATCTGCCGACACAA+TGG | 0.579223 | 3_2:-88530433 | Msa0435390:CDS |
CATTGTGTCGGCAGATGCAG+AGG | 0.583387 | 3_2:+88530434 | None:intergenic |
TTTCTTGTCAGGCATGTGCA+TGG | 0.585675 | 3_2:-88535240 | Msa0435390:intron |
AAGTGTTGTAGATATGAAGA+TGG | 0.590005 | 3_2:-88532222 | Msa0435390:intron |
AAGATGGTACCATGCTTTGG+TGG | 0.590770 | 3_2:-88532206 | Msa0435390:CDS |
TACGGGGTCAAAAGCAGGGG+AGG | 0.593678 | 3_2:-88536626 | Msa0435390:CDS |
GAGTACGGGGTCAAAAGCAG+GGG | 0.597141 | 3_2:-88536629 | Msa0435390:CDS |
TCTCGGGAGCTGCAGATGAG+AGG | 0.598112 | 3_2:-88532007 | Msa0435390:CDS |
TTTACCTTAGGGTACATGTG+TGG | 0.601199 | 3_2:-88531153 | Msa0435390:intron |
TGTGTACCATCTGAATCTCA+AGG | 0.602729 | 3_2:-88535206 | Msa0435390:CDS |
CGTACTCTGATTCTTAGCCA+TGG | 0.608659 | 3_2:+88536645 | None:intergenic |
CCACAGCGCCACCATTGTGT+CGG | 0.609267 | 3_2:+88530422 | None:intergenic |
ATCATATGTGGCTTTGTCGG+GGG | 0.609638 | 3_2:-88535811 | Msa0435390:CDS |
AGTTACTACCAATATTTGAA+GGG | 0.610741 | 3_2:+88535647 | None:intergenic |
AGATTGCCTTGAAACAGAAG+AGG | 0.618951 | 3_2:-88536596 | Msa0435390:CDS |
CCGACACAATGGTGGCGCTG+TGG | 0.629692 | 3_2:-88530422 | Msa0435390:CDS |
GAGGATTGTGATGTACAGCT+TGG | 0.629834 | 3_2:-88531988 | Msa0435390:CDS |
CCGTACATCCCACCAAAGCA+TGG | 0.636894 | 3_2:+88532197 | None:intergenic |
GGTCAATAAAGAAATCACAT+TGG | 0.651588 | 3_2:-88531132 | Msa0435390:CDS |
ATTGACGGATCTTGCAAAGG+GGG | 0.652410 | 3_2:-88532032 | Msa0435390:CDS |
AGATGGTACCATGCTTTGGT+GGG | 0.687336 | 3_2:-88532205 | Msa0435390:CDS |
ACTTAAGTATCATCATGCCA+CGG | 0.698852 | 3_2:-88530629 | Msa0435390:intron |
TGGCTAAGAATCAGAGTACG+GGG | 0.711382 | 3_2:-88536642 | Msa0435390:CDS |
TATTGACGGATCTTGCAAAG+GGG | 0.721177 | 3_2:-88532033 | Msa0435390:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTCAATAAATTTTATACTA+TGG | + | chr3_2:88533344-88533363 | None:intergenic | 10.0% |
!! | AAACATTTGAAGAATATAAA+AGG | + | chr3_2:88530999-88531018 | None:intergenic | 15.0% |
!! | ACATAATATTGTTAACAAAA+AGG | + | chr3_2:88531060-88531079 | None:intergenic | 15.0% |
!! | AACAATATTATGTACAATTA+AGG | - | chr3_2:88531067-88531086 | Msa0435390:CDS | 15.0% |
!! | ACAATATTATGTACAATTAA+GGG | - | chr3_2:88531068-88531087 | Msa0435390:CDS | 15.0% |
!! | TAATATTTAAATCAGACAAA+CGG | + | chr3_2:88532701-88532720 | None:intergenic | 15.0% |
!! | TTGAAAAGAATCTTATAAAA+AGG | - | chr3_2:88533497-88533516 | Msa0435390:intron | 15.0% |
!! | TGAAAAGAATCTTATAAAAA+GGG | - | chr3_2:88533498-88533517 | Msa0435390:intron | 15.0% |
!!! | AAATATTTTTTATGGAAATC+TGG | - | chr3_2:88534059-88534078 | Msa0435390:intron | 15.0% |
!!! | AATATTTTTTATGGAAATCT+GGG | - | chr3_2:88534060-88534079 | Msa0435390:intron | 15.0% |
!!! | CTTAAAGATATTTTTAATGT+GGG | + | chr3_2:88534516-88534535 | None:intergenic | 15.0% |
!!! | ACTTAAAGATATTTTTAATG+TGG | + | chr3_2:88534517-88534536 | None:intergenic | 15.0% |
!!! | TGAATATATTATCTTTTTAG+AGG | + | chr3_2:88535193-88535212 | None:intergenic | 15.0% |
!! | AAGATTTATTAAGTAAACTA+AGG | - | chr3_2:88535489-88535508 | Msa0435390:intron | 15.0% |
!!! | TTTTACACATCAAAGAATAT+GGG | - | chr3_2:88530774-88530793 | Msa0435390:intron | 20.0% |
!! | AATAACAAAATTCTTAGACT+TGG | - | chr3_2:88530804-88530823 | Msa0435390:intron | 20.0% |
!! | TAATATTGTTAACAAAAAGG+TGG | + | chr3_2:88531057-88531076 | None:intergenic | 20.0% |
!!! | ATTGTTTAAGGTTGAAATTT+GGG | - | chr3_2:88531203-88531222 | Msa0435390:intron | 20.0% |
!! | TGAGAATTTCAAAAAAATGA+TGG | + | chr3_2:88531345-88531364 | None:intergenic | 20.0% |
!! | AGAAAATATAACCAAAGAAT+GGG | + | chr3_2:88531622-88531641 | None:intergenic | 20.0% |
!!! | TTCTATTTATTTTGGTAACT+AGG | + | chr3_2:88532337-88532356 | None:intergenic | 20.0% |
!!! | CTCAATACTTCTATTTATTT+TGG | + | chr3_2:88532345-88532364 | None:intergenic | 20.0% |
!! | AAATCAGAGAAAAAGAAAAA+AGG | - | chr3_2:88532535-88532554 | Msa0435390:intron | 20.0% |
!!! | AATGGATAGATTTGATTTAA+GGG | - | chr3_2:88532566-88532585 | Msa0435390:intron | 20.0% |
!! | AATATTTAAATCAGACAAAC+GGG | + | chr3_2:88532700-88532719 | None:intergenic | 20.0% |
!! | ACTTAGTTTAAACTCAAATA+TGG | - | chr3_2:88532768-88532787 | Msa0435390:intron | 20.0% |
!! | ACATAAATCTAATACAATGT+AGG | + | chr3_2:88533045-88533064 | None:intergenic | 20.0% |
!!! | AATCAAACTTTTGAAACAAT+AGG | - | chr3_2:88533639-88533658 | Msa0435390:intron | 20.0% |
!! | AAATAAAAAATGACAGAATG+TGG | + | chr3_2:88533671-88533690 | None:intergenic | 20.0% |
!!! | AGGAGCTTAAATATTTTTTA+TGG | - | chr3_2:88534051-88534070 | Msa0435390:intron | 20.0% |
!! | CTTTATTAATTAATGTTGTC+AGG | - | chr3_2:88534550-88534569 | Msa0435390:intron | 20.0% |
!! | ACACATTTATATTACAAATC+AGG | + | chr3_2:88534620-88534639 | None:intergenic | 20.0% |
!! | TGAAAATAATGAGTAATCTA+AGG | + | chr3_2:88534802-88534821 | None:intergenic | 20.0% |
!! | GGAATACAGATAAAAATTAT+AGG | + | chr3_2:88534999-88535018 | None:intergenic | 20.0% |
!!! | ATCATAGTTTTATTCTAAGA+AGG | + | chr3_2:88535020-88535039 | None:intergenic | 20.0% |
!! | TAAGTTTGACTATTGAAATA+AGG | + | chr3_2:88535073-88535092 | None:intergenic | 20.0% |
!! | ACATTAACAACAACTAATTA+TGG | + | chr3_2:88535928-88535947 | None:intergenic | 20.0% |
!! | AATGTAGGAGAAAAAAAAAA+GGG | + | chr3_2:88536117-88536136 | None:intergenic | 20.0% |
!! | TAATGTAGGAGAAAAAAAAA+AGG | + | chr3_2:88536118-88536137 | None:intergenic | 20.0% |
!! | TTGAAACAATACATCATTAT+TGG | - | chr3_2:88536339-88536358 | Msa0435390:intron | 20.0% |
!! | TGATATTAGTATGATGTATT+AGG | - | chr3_2:88536526-88536545 | Msa0435390:intron | 20.0% |
!! | GATATTAGTATGATGTATTA+GGG | - | chr3_2:88536527-88536546 | Msa0435390:intron | 20.0% |
!!! | AGAACTTTTGAAACTTGTTA+CGG | - | chr3_2:88530400-88530419 | Msa0435390:CDS | 25.0% |
!!! | TAAATTTACTGATTTACTGC+TGG | + | chr3_2:88530688-88530707 | None:intergenic | 25.0% |
! | GCAGTAAATCAGTAAATTTA+AGG | - | chr3_2:88530688-88530707 | Msa0435390:intron | 25.0% |
!! | CTTTTACACATCAAAGAATA+TGG | - | chr3_2:88530773-88530792 | Msa0435390:intron | 25.0% |
! | TAAAAGGAAACAACATAGAA+AGG | + | chr3_2:88530983-88531002 | None:intergenic | 25.0% |
!! | CATTGTTTAAGGTTGAAATT+TGG | - | chr3_2:88531202-88531221 | Msa0435390:intron | 25.0% |
! | AGTTACTACCAATATTTGAA+GGG | + | chr3_2:88531260-88531279 | None:intergenic | 25.0% |
! | AGAATGCAAACATCAATTTA+AGG | + | chr3_2:88531522-88531541 | None:intergenic | 25.0% |
! | GAGAAAATATAACCAAAGAA+TGG | + | chr3_2:88531623-88531642 | None:intergenic | 25.0% |
!! | TCAAGGATTTTTAAATGTCA+TGG | - | chr3_2:88531715-88531734 | Msa0435390:intron | 25.0% |
! | CAATATTGGAAGTTACTTAA+GGG | - | chr3_2:88531952-88531971 | Msa0435390:intron | 25.0% |
! | AATATTGGAAGTTACTTAAG+GGG | - | chr3_2:88531953-88531972 | Msa0435390:intron | 25.0% |
! | CATTTCTCAAAAGAAATGAA+GGG | - | chr3_2:88532022-88532041 | Msa0435390:CDS | 25.0% |
! | GTCATTAAATTCATGTAGAT+TGG | - | chr3_2:88532240-88532259 | Msa0435390:intron | 25.0% |
!! | TTGGTAACTAGGTAAAATAT+TGG | + | chr3_2:88532326-88532345 | None:intergenic | 25.0% |
!! | AAAATTTTATCTTTCTCCCT+TGG | - | chr3_2:88532421-88532440 | Msa0435390:intron | 25.0% |
!! | AAATTTTATCTTTCTCCCTT+GGG | - | chr3_2:88532422-88532441 | Msa0435390:intron | 25.0% |
!!! | TTTTCTCTGATTTTTTTCGA+AGG | + | chr3_2:88532528-88532547 | None:intergenic | 25.0% |
!! | AGAAAAAAGGCATAATAGAA+TGG | - | chr3_2:88532548-88532567 | Msa0435390:intron | 25.0% |
!! | GAATGGATAGATTTGATTTA+AGG | - | chr3_2:88532565-88532584 | Msa0435390:intron | 25.0% |
! | ATATTTAAATCAGACAAACG+GGG | + | chr3_2:88532699-88532718 | None:intergenic | 25.0% |
!!! | AATATTATTTTTCACCAGCT+TGG | - | chr3_2:88532714-88532733 | Msa0435390:intron | 25.0% |
! | AATCTAATACAATGTAGGTA+TGG | + | chr3_2:88533040-88533059 | None:intergenic | 25.0% |
! | ACAACGAAATTCTGTATTTA+GGG | + | chr3_2:88533294-88533313 | None:intergenic | 25.0% |
! | AAAATATGCAACATAGTTAG+AGG | - | chr3_2:88533438-88533457 | Msa0435390:intron | 25.0% |
! | AAGTAGTAAGTAATAACTGT+CGG | - | chr3_2:88533561-88533580 | Msa0435390:intron | 25.0% |
!! | GGTTCAAATTTTGTTACTAA+TGG | + | chr3_2:88533590-88533609 | None:intergenic | 25.0% |
! | ATTATAAACCTTCCAAATTC+TGG | - | chr3_2:88533696-88533715 | Msa0435390:intron | 25.0% |
! | TTATAAACCTTCCAAATTCT+GGG | - | chr3_2:88533697-88533716 | Msa0435390:intron | 25.0% |
! | AAAAAATTGGTTAGAGTTTG+TGG | - | chr3_2:88533959-88533978 | Msa0435390:intron | 25.0% |
! | ATTAATTAATGTTGTCAGGT+AGG | - | chr3_2:88534554-88534573 | Msa0435390:intron | 25.0% |
! | TTAATTAATGTTGTCAGGTA+GGG | - | chr3_2:88534555-88534574 | Msa0435390:intron | 25.0% |
! | ATCTACAACACTTAGAAAAA+AGG | + | chr3_2:88534675-88534694 | None:intergenic | 25.0% |
!! | CTCTGGTTATCTTATTTATA+TGG | - | chr3_2:88535135-88535154 | Msa0435390:intron | 25.0% |
! | TATGGTATTTGATTCTTAGA+TGG | - | chr3_2:88535153-88535172 | Msa0435390:intron | 25.0% |
!!! | GATTCTTAGATGGATTAAAA+TGG | - | chr3_2:88535163-88535182 | Msa0435390:intron | 25.0% |
! | TATTGTGTAATTACAGTTGA+AGG | - | chr3_2:88535226-88535245 | Msa0435390:CDS | 25.0% |
! | ATTGTGTAATTACAGTTGAA+GGG | - | chr3_2:88535227-88535246 | Msa0435390:CDS | 25.0% |
!! | TTTTTACCCATAATGATAAC+AGG | - | chr3_2:88535411-88535430 | Msa0435390:intron | 25.0% |
!! | CCAAATTTTGAACATTTGAA+CGG | + | chr3_2:88535453-88535472 | None:intergenic | 25.0% |
! | AAGATACACAGATATGAAAA+AGG | + | chr3_2:88535730-88535749 | None:intergenic | 25.0% |
!!! | TGTGTATCTTTTTTACCTTA+GGG | - | chr3_2:88535740-88535759 | Msa0435390:intron | 25.0% |
! | TTAAATCGTTTAAAAACCTG+TGG | + | chr3_2:88535865-88535884 | None:intergenic | 25.0% |
!! | TTAGTTGTTGTTAATGTTCT+TGG | - | chr3_2:88535931-88535950 | Msa0435390:intron | 25.0% |
! | GTTAGTTGTTTGTCATAAAT+TGG | + | chr3_2:88535988-88536007 | None:intergenic | 25.0% |
! | TCTAATGCAGTTAAAACTAA+AGG | + | chr3_2:88536039-88536058 | None:intergenic | 25.0% |
! | AAACACATACTACATAATGT+AGG | + | chr3_2:88536132-88536151 | None:intergenic | 25.0% |
!! | AATACCTTGATTATTTTCGT+TGG | - | chr3_2:88536166-88536185 | Msa0435390:intron | 25.0% |
! | TCATACTAATATCATGTTCT+TGG | + | chr3_2:88536520-88536539 | None:intergenic | 25.0% |
CTAATATGGTAAAAAGTAGC+AGG | + | chr3_2:88530467-88530486 | None:intergenic | 30.0% | |
! | AATGTCGTGTTACTCTAATA+TGG | + | chr3_2:88530481-88530500 | None:intergenic | 30.0% |
TGTGGAACAATAGAACTTTA+TGG | - | chr3_2:88530573-88530592 | Msa0435390:intron | 30.0% | |
AGTATAAGCATGTCTATTTC+TGG | - | chr3_2:88530642-88530661 | Msa0435390:CDS | 30.0% | |
TAAAAGAAAAACGACAACAG+TGG | + | chr3_2:88530759-88530778 | None:intergenic | 30.0% | |
AACATATATCAATCCAGACT+CGG | + | chr3_2:88530840-88530859 | None:intergenic | 30.0% | |
! | ATTAGGAATTTGGTCCATTT+TGG | + | chr3_2:88530956-88530975 | None:intergenic | 30.0% |
TTCTTCATCTTTGTAAACTG+TGG | - | chr3_2:88531157-88531176 | Msa0435390:intron | 30.0% | |
ACCAGTTCTATCATTGTTTA+AGG | - | chr3_2:88531191-88531210 | Msa0435390:intron | 30.0% | |
ACCTTAAACAATGATAGAAC+TGG | + | chr3_2:88531195-88531214 | None:intergenic | 30.0% | |
GAGTTACTACCAATATTTGA+AGG | + | chr3_2:88531261-88531280 | None:intergenic | 30.0% | |
!!! | TTTTGAAATTCTCATTCCTC+AGG | - | chr3_2:88531351-88531370 | Msa0435390:intron | 30.0% |
ACATACATACATGCATACAT+GGG | + | chr3_2:88531397-88531416 | None:intergenic | 30.0% | |
AAGCAACAATTAAAGTGAGA+TGG | + | chr3_2:88531474-88531493 | None:intergenic | 30.0% | |
TAATGCAATCATTTCTTGTC+AGG | - | chr3_2:88531653-88531672 | Msa0435390:intron | 30.0% | |
AAAAATCCTTGAGATTCAGA+TGG | + | chr3_2:88531707-88531726 | None:intergenic | 30.0% | |
! | GATTTTTAAATGTCATGGCT+GGG | - | chr3_2:88531720-88531739 | Msa0435390:intron | 30.0% |
AGGAGTAAATCTTGATCATT+GGG | - | chr3_2:88531818-88531837 | Msa0435390:intron | 30.0% | |
ACATTTAGGCATACCAATAT+TGG | - | chr3_2:88531938-88531957 | Msa0435390:intron | 30.0% | |
CCTTAAGTAACTTCCAATAT+TGG | + | chr3_2:88531954-88531973 | None:intergenic | 30.0% | |
CCAATATTGGAAGTTACTTA+AGG | - | chr3_2:88531951-88531970 | Msa0435390:intron | 30.0% | |
!! | ATTTCTTTTGAGAAATGGAG+AGG | + | chr3_2:88532019-88532038 | None:intergenic | 30.0% |
!! | CCTTCATTTCTTTTGAGAAA+TGG | + | chr3_2:88532024-88532043 | None:intergenic | 30.0% |
CCATTTCTCAAAAGAAATGA+AGG | - | chr3_2:88532021-88532040 | Msa0435390:CDS | 30.0% | |
GATAGTGACACATATGATAT+TGG | - | chr3_2:88532055-88532074 | Msa0435390:intron | 30.0% | |
CACAAGATCATGTTAAAGAT+TGG | + | chr3_2:88532169-88532188 | None:intergenic | 30.0% | |
CAATCTTTAACATGATCTTG+TGG | - | chr3_2:88532167-88532186 | Msa0435390:CDS | 30.0% | |
! | ATGTTATTTGTCCTGTTGTT+AGG | - | chr3_2:88532277-88532296 | Msa0435390:intron | 30.0% |
! | TGTTATTTGTCCTGTTGTTA+GGG | - | chr3_2:88532278-88532297 | Msa0435390:intron | 30.0% |
GATTGTTTGTATTGTGCTTA+AGG | + | chr3_2:88532600-88532619 | None:intergenic | 30.0% | |
TCATGTAATAATCAGTTCCA+AGG | + | chr3_2:88533207-88533226 | None:intergenic | 30.0% | |
AACTGATTATTACATGACTC+TGG | - | chr3_2:88533210-88533229 | Msa0435390:intron | 30.0% | |
ACATGACTCTGGTTATTTAT+TGG | - | chr3_2:88533221-88533240 | Msa0435390:intron | 30.0% | |
CATGACTCTGGTTATTTATT+GGG | - | chr3_2:88533222-88533241 | Msa0435390:intron | 30.0% | |
GGACGAATATGGTATTAAAT+TGG | + | chr3_2:88533273-88533292 | None:intergenic | 30.0% | |
GACAACGAAATTCTGTATTT+AGG | + | chr3_2:88533295-88533314 | None:intergenic | 30.0% | |
ATCACGAGAATTAAGAAAGT+TGG | - | chr3_2:88533318-88533337 | Msa0435390:intron | 30.0% | |
CCTGTAACAAATACTATGAT+GGG | + | chr3_2:88533411-88533430 | None:intergenic | 30.0% | |
ACCTGTAACAAATACTATGA+TGG | + | chr3_2:88533412-88533431 | None:intergenic | 30.0% | |
GACAAGAAAAAATCTCAAGA+GGG | - | chr3_2:88533520-88533539 | Msa0435390:intron | 30.0% | |
TCAAGAGGGTCTTTATATAT+AGG | - | chr3_2:88533534-88533553 | Msa0435390:intron | 30.0% | |
CAAGAGGGTCTTTATATATA+GGG | - | chr3_2:88533535-88533554 | Msa0435390:intron | 30.0% | |
ATCCTTTCAAATCCAATGTT+AGG | + | chr3_2:88533793-88533812 | None:intergenic | 30.0% | |
TTGGATTTGAAAGGATAGTA+CGG | - | chr3_2:88533797-88533816 | Msa0435390:intron | 30.0% | |
CCACATCAAAATAATCCATA+TGG | + | chr3_2:88533909-88533928 | None:intergenic | 30.0% | |
!!! | CCATATGGATTATTTTGATG+TGG | - | chr3_2:88533906-88533925 | Msa0435390:intron | 30.0% |
! | ATAAAGGTTTTTCCATTTCC+AGG | - | chr3_2:88534108-88534127 | Msa0435390:intron | 30.0% |
! | TAAAGGTTTTTCCATTTCCA+GGG | - | chr3_2:88534109-88534128 | Msa0435390:intron | 30.0% |
ATTGTCATAGAAACAAAGGA+GGG | + | chr3_2:88534223-88534242 | None:intergenic | 30.0% | |
AATTGTCATAGAAACAAAGG+AGG | + | chr3_2:88534224-88534243 | None:intergenic | 30.0% | |
TTGACATGAATAAGAAAGGA+TGG | + | chr3_2:88534288-88534307 | None:intergenic | 30.0% | |
TCCTTTCTTATTCATGTCAA+AGG | - | chr3_2:88534288-88534307 | Msa0435390:intron | 30.0% | |
CCTTTCTTATTCATGTCAAA+GGG | - | chr3_2:88534289-88534308 | Msa0435390:intron | 30.0% | |
! | AAGTGTTGTAGATATGAAGA+TGG | - | chr3_2:88534682-88534701 | Msa0435390:intron | 30.0% |
AACTATGATGCTTCTAGTAA+TGG | - | chr3_2:88535031-88535050 | Msa0435390:intron | 30.0% | |
!!! | CCTTTTGCTATTCAGATTAA+TGG | + | chr3_2:88535376-88535395 | None:intergenic | 30.0% |
CCATTAATCTGAATAGCAAA+AGG | - | chr3_2:88535373-88535392 | Msa0435390:intron | 30.0% | |
CCGTTCAAATGTTCAAAATT+TGG | - | chr3_2:88535450-88535469 | Msa0435390:intron | 30.0% | |
!!! | CTGTGTATCTTTTTTACCTT+AGG | - | chr3_2:88535739-88535758 | Msa0435390:intron | 30.0% |
GGTCAATAAAGAAATCACAT+TGG | - | chr3_2:88535772-88535791 | Msa0435390:intron | 30.0% | |
TTATGGATCATCAAGAAATG+TGG | + | chr3_2:88535911-88535930 | None:intergenic | 30.0% | |
GATTCATGTCAATAATACTG+AGG | + | chr3_2:88535963-88535982 | None:intergenic | 30.0% | |
TGTACCAACGAAAATAATCA+AGG | + | chr3_2:88536173-88536192 | None:intergenic | 30.0% | |
ATATCCTTATTCTGCCAATA+AGG | + | chr3_2:88536224-88536243 | None:intergenic | 30.0% | |
AGGATATATAATTACCGCAA+AGG | - | chr3_2:88536237-88536256 | Msa0435390:intron | 30.0% | |
ATGATACTTAAGTACAGCTA+AGG | + | chr3_2:88536268-88536287 | None:intergenic | 30.0% | |
TTCGTCTGATTGTAAACTTA+TGG | - | chr3_2:88536447-88536466 | Msa0435390:intron | 30.0% | |
TACTAATATCATGTTCTTGG+AGG | + | chr3_2:88536517-88536536 | None:intergenic | 30.0% | |
! | TGTGAGTTCTAGTCAACAAT+TGG | - | chr3_2:88530370-88530389 | Msa0435390:three_prime_UTR | 35.0% |
!!! | ACTTTTGAAACTTGTTACGG+TGG | - | chr3_2:88530403-88530422 | Msa0435390:CDS | 35.0% |
GAATTCAAATGTCAGGTTCA+TGG | + | chr3_2:88530438-88530457 | None:intergenic | 35.0% | |
GAACTCTGAATTCAAATGTC+AGG | + | chr3_2:88530445-88530464 | None:intergenic | 35.0% | |
ACGACATTCATTGAATTGTG+AGG | - | chr3_2:88530493-88530512 | Msa0435390:intron | 35.0% | |
!! | CAAATTTGATAGCGTTGCAT+TGG | - | chr3_2:88530540-88530559 | Msa0435390:intron | 35.0% |
TTATACTCAGAAAGCAACTG+TGG | + | chr3_2:88530629-88530648 | None:intergenic | 35.0% | |
TAGCTGTATTTGAGCTTGTA+AGG | - | chr3_2:88530713-88530732 | Msa0435390:intron | 35.0% | |
!! | TGAGTCTTCTCGCTTATTTT+TGG | - | chr3_2:88530900-88530919 | Msa0435390:intron | 35.0% |
GAAAGGCAAGATTAGGAATT+TGG | + | chr3_2:88530966-88530985 | None:intergenic | 35.0% | |
CAACATAGAAAGGCAAGATT+AGG | + | chr3_2:88530973-88530992 | None:intergenic | 35.0% | |
CAATTAAGGGCTATCATATG+TGG | - | chr3_2:88531081-88531100 | Msa0435390:CDS | 35.0% | |
TCTTCAATTGTTAGCAGCAA+AGG | - | chr3_2:88531279-88531298 | Msa0435390:intron | 35.0% | |
CACATACATACATGCATACA+TGG | + | chr3_2:88531398-88531417 | None:intergenic | 35.0% | |
ATTAATAGCTAGACCTTGAC+TGG | - | chr3_2:88531592-88531611 | Msa0435390:intron | 35.0% | |
! | GGATTTTTAAATGTCATGGC+TGG | - | chr3_2:88531719-88531738 | Msa0435390:intron | 35.0% |
ACGTCTTCAATGTGTATTTG+CGG | + | chr3_2:88531781-88531800 | None:intergenic | 35.0% | |
GAGGAGTAAATCTTGATCAT+TGG | - | chr3_2:88531817-88531836 | Msa0435390:intron | 35.0% | |
ACGATCCAAGTGATATAGAT+TGG | - | chr3_2:88531893-88531912 | Msa0435390:intron | 35.0% | |
CTTGACCAATCTATATCACT+TGG | + | chr3_2:88531901-88531920 | None:intergenic | 35.0% | |
CGCTTAAAAAGTCCTAAACT+CGG | - | chr3_2:88531985-88532004 | Msa0435390:CDS | 35.0% | |
GCTTAAAAAGTCCTAAACTC+GGG | - | chr3_2:88531986-88532005 | Msa0435390:CDS | 35.0% | |
! | ATATGTGTCACTATCTCCAA+TGG | + | chr3_2:88532050-88532069 | None:intergenic | 35.0% |
AGTGACACATATGATATTGG+TGG | - | chr3_2:88532058-88532077 | Msa0435390:intron | 35.0% | |
GTGACACATATGATATTGGT+GGG | - | chr3_2:88532059-88532078 | Msa0435390:intron | 35.0% | |
GATCTTGAAAGAAATGGAGA+GGG | + | chr3_2:88532124-88532143 | None:intergenic | 35.0% | |
ACAAACAATCCTCCTTATGA+AGG | - | chr3_2:88532610-88532629 | Msa0435390:intron | 35.0% | |
CATACATGTCATACAGATGT+TGG | + | chr3_2:88532664-88532683 | None:intergenic | 35.0% | |
GTCTCGAACAAACTTCATTT+AGG | - | chr3_2:88532911-88532930 | Msa0435390:intron | 35.0% | |
GAATCTTGACTATCCATACA+AGG | + | chr3_2:88532982-88533001 | None:intergenic | 35.0% | |
GATTTATGTATGTCATGTCC+TGG | - | chr3_2:88533056-88533075 | Msa0435390:intron | 35.0% | |
TGTGCAAACATGACAGAAAA+TGG | - | chr3_2:88533117-88533136 | Msa0435390:intron | 35.0% | |
TCTGTATTTAGGGACGAATA+TGG | + | chr3_2:88533284-88533303 | None:intergenic | 35.0% | |
! | CCCATCATAGTATTTGTTAC+AGG | - | chr3_2:88533408-88533427 | Msa0435390:intron | 35.0% |
GGACAAGAAAAAATCTCAAG+AGG | - | chr3_2:88533519-88533538 | Msa0435390:intron | 35.0% | |
AAAAATGACAGAATGTGGCT+TGG | + | chr3_2:88533666-88533685 | None:intergenic | 35.0% | |
TATGAGAAAACAAGCTACAG+CGG | + | chr3_2:88533762-88533781 | None:intergenic | 35.0% | |
CATAAAACTGAGCCTAACAT+TGG | - | chr3_2:88533778-88533797 | Msa0435390:intron | 35.0% | |
AGCCTAACATTGGATTTGAA+AGG | - | chr3_2:88533788-88533807 | Msa0435390:intron | 35.0% | |
AGTATTGTGCACTGTGAATT+TGG | - | chr3_2:88533840-88533859 | Msa0435390:intron | 35.0% | |
TGAATTTGGTACTACGTTTG+TGG | - | chr3_2:88533854-88533873 | Msa0435390:intron | 35.0% | |
GAATTTGGTACTACGTTTGT+GGG | - | chr3_2:88533855-88533874 | Msa0435390:intron | 35.0% | |
!! | GGAAGATTAAGGCATTGATT+TGG | - | chr3_2:88533882-88533901 | Msa0435390:intron | 35.0% |
!!! | TTATTTTGATGTGGTCTGTC+TGG | - | chr3_2:88533915-88533934 | Msa0435390:intron | 35.0% |
! | TAGTAAGGTTTTGCTTTGCA+AGG | - | chr3_2:88534031-88534050 | Msa0435390:intron | 35.0% |
CTGTACCATTAACACAAAAC+AGG | + | chr3_2:88534087-88534106 | None:intergenic | 35.0% | |
GTGTTAATGGTACAGCATAA+AGG | - | chr3_2:88534092-88534111 | Msa0435390:intron | 35.0% | |
! | TAATAGCCATGATTAGCTCA+TGG | + | chr3_2:88534177-88534196 | None:intergenic | 35.0% |
GGCAATTGTCATAGAAACAA+AGG | + | chr3_2:88534227-88534246 | None:intergenic | 35.0% | |
CCCTTTGACATGAATAAGAA+AGG | + | chr3_2:88534292-88534311 | None:intergenic | 35.0% | |
ATCACTATGCATATAAGAGG+AGG | + | chr3_2:88534343-88534362 | None:intergenic | 35.0% | |
TCCTCTTATATGCATAGTGA+TGG | - | chr3_2:88534342-88534361 | Msa0435390:intron | 35.0% | |
! | AACTAGAAAGGTGTAACCAA+GGG | - | chr3_2:88534410-88534429 | Msa0435390:intron | 35.0% |
TGGAATTTCACAGAACTTAC+TGG | + | chr3_2:88534745-88534764 | None:intergenic | 35.0% | |
!!! | GATTTTGTAGTTCTGAGCAT+TGG | - | chr3_2:88534848-88534867 | Msa0435390:intron | 35.0% |
!! | AGTTGAAGGGTTGATGTAAT+TGG | - | chr3_2:88535240-88535259 | Msa0435390:intron | 35.0% |
TACCACTTCAAGAATACTTG+AGG | - | chr3_2:88535344-88535363 | Msa0435390:intron | 35.0% | |
CAACAGCCTGTTATCATTAT+GGG | + | chr3_2:88535420-88535439 | None:intergenic | 35.0% | |
!! | ATACAAACTTGCTACTGCAA+TGG | + | chr3_2:88535550-88535569 | None:intergenic | 35.0% |
TTATTCTGCCAATAAGGTGA+CGG | + | chr3_2:88536218-88536237 | None:intergenic | 35.0% | |
ACTTAAGTATCATCATGCCA+CGG | - | chr3_2:88536275-88536294 | Msa0435390:intron | 35.0% | |
ATGGCTAAGAATCAGAGTAC+GGG | - | chr3_2:88530261-88530280 | Msa0435390:three_prime_UTR | 40.0% | |
AGATTGCCTTGAAACAGAAG+AGG | - | chr3_2:88530308-88530327 | Msa0435390:three_prime_UTR | 40.0% | |
TATGAGCCTCTTCTGTTTCA+AGG | + | chr3_2:88530317-88530336 | None:intergenic | 40.0% | |
!! | AGTTGTTCTGAAAGCTCTGA+AGG | - | chr3_2:88530345-88530364 | Msa0435390:three_prime_UTR | 40.0% |
TCAAATGTCAGGTTCATGGA+TGG | + | chr3_2:88530434-88530453 | None:intergenic | 40.0% | |
!! | TGCATTGGCTGCAAAATTTG+TGG | - | chr3_2:88530555-88530574 | Msa0435390:intron | 40.0% |
!!! | GTCTTCTCGCTTATTTTTGG+AGG | - | chr3_2:88530903-88530922 | Msa0435390:intron | 40.0% |
ATCTCCAAAGTGCAATAGCA+GGG | + | chr3_2:88530929-88530948 | None:intergenic | 40.0% | |
! | CTTTGGAGATGGTACCAAAA+TGG | - | chr3_2:88530939-88530958 | Msa0435390:intron | 40.0% |
!! | GCTATCATATGTGGCTTTGT+CGG | - | chr3_2:88531090-88531109 | Msa0435390:CDS | 40.0% |
!! | CTATCATATGTGGCTTTGTC+GGG | - | chr3_2:88531091-88531110 | Msa0435390:CDS | 40.0% |
!! | TATCATATGTGGCTTTGTCG+GGG | - | chr3_2:88531092-88531111 | Msa0435390:CDS | 40.0% |
ATGATAGAACTGGTGAGCTT+GGG | + | chr3_2:88531185-88531204 | None:intergenic | 40.0% | |
AATGATAGAACTGGTGAGCT+TGG | + | chr3_2:88531186-88531205 | None:intergenic | 40.0% | |
ACACGTCTCCCTTCAAATAT+TGG | - | chr3_2:88531249-88531268 | Msa0435390:intron | 40.0% | |
AAGAATGGGAAATCCAGTCA+AGG | + | chr3_2:88531608-88531627 | None:intergenic | 40.0% | |
TGACTGGATTTCCCATTCTT+TGG | - | chr3_2:88531608-88531627 | Msa0435390:intron | 40.0% | |
TGTGTACCATCTGAATCTCA+AGG | - | chr3_2:88531698-88531717 | Msa0435390:intron | 40.0% | |
CGTCTTCAATGTGTATTTGC+GGG | + | chr3_2:88531780-88531799 | None:intergenic | 40.0% | |
TGTCTCCTCATCTCACATTT+AGG | - | chr3_2:88531924-88531943 | Msa0435390:intron | 40.0% | |
GTATGCCTAAATGTGAGATG+AGG | + | chr3_2:88531932-88531951 | None:intergenic | 40.0% | |
AAAGAAATGAAGGGCTCCAT+TGG | - | chr3_2:88532031-88532050 | Msa0435390:CDS | 40.0% | |
GGATCTTGAAAGAAATGGAG+AGG | + | chr3_2:88532125-88532144 | None:intergenic | 40.0% | |
GGTTGGGATCTTGAAAGAAA+TGG | + | chr3_2:88532130-88532149 | None:intergenic | 40.0% | |
AAGATTGGAATGCCGAGTTT+GGG | + | chr3_2:88532154-88532173 | None:intergenic | 40.0% | |
AAAGATTGGAATGCCGAGTT+TGG | + | chr3_2:88532155-88532174 | None:intergenic | 40.0% | |
CACAAATACACACAGTGAGA+CGG | + | chr3_2:88532193-88532212 | None:intergenic | 40.0% | |
CAAACTCAGCTTGAAAGAGA+GGG | + | chr3_2:88532502-88532521 | None:intergenic | 40.0% | |
TCAAACTCAGCTTGAAAGAG+AGG | + | chr3_2:88532503-88532522 | None:intergenic | 40.0% | |
! | AATCCTCCTTATGAAGGTGT+TGG | - | chr3_2:88532616-88532635 | Msa0435390:intron | 40.0% |
AACGTTCCAACACCTTCATA+AGG | + | chr3_2:88532625-88532644 | None:intergenic | 40.0% | |
!! | TTATGAAGGTGTTGGAACGT+TGG | - | chr3_2:88532624-88532643 | Msa0435390:intron | 40.0% |
TTTAAATCAGACAAACGGGG+AGG | + | chr3_2:88532696-88532715 | None:intergenic | 40.0% | |
! | GTATAAGTTGAGACGAAGAG+AGG | + | chr3_2:88533008-88533027 | None:intergenic | 40.0% |
TTATGTATGTCATGTCCTGG+TGG | - | chr3_2:88533059-88533078 | Msa0435390:intron | 40.0% | |
!!! | TGAGTTTTGAAGAGTAGCCT+TGG | - | chr3_2:88533187-88533206 | Msa0435390:intron | 40.0% |
ACTCTGGTTATTTATTGGGC+AGG | - | chr3_2:88533226-88533245 | Msa0435390:intron | 40.0% | |
TGCACTCTTCAAGAGATGAT+TGG | - | chr3_2:88533377-88533396 | Msa0435390:intron | 40.0% | |
! | CAACATAGTTAGAGGTATGC+AGG | - | chr3_2:88533446-88533465 | Msa0435390:intron | 40.0% |
! | AGTTAGAGGTATGCAGGTAA+TGG | - | chr3_2:88533452-88533471 | Msa0435390:intron | 40.0% |
ACTAATGAATGGTCCAAACC+AGG | + | chr3_2:88533723-88533742 | None:intergenic | 40.0% | |
CAGAGTAGCTGACTAATGAA+TGG | + | chr3_2:88533734-88533753 | None:intergenic | 40.0% | |
!! | TTGTGGGCTTTGGAAGATTA+AGG | - | chr3_2:88533871-88533890 | Msa0435390:intron | 40.0% |
!! | AGGCATTGATTTGGTCCATA+TGG | - | chr3_2:88533891-88533910 | Msa0435390:intron | 40.0% |
!! | TGTCTGGAAGTATCTACTGT+GGG | - | chr3_2:88533931-88533950 | Msa0435390:intron | 40.0% |
!! | ACTGTGGGTGCTGAAAAAAT+TGG | - | chr3_2:88533946-88533965 | Msa0435390:intron | 40.0% |
TTTGGCATGTCTTTGTGACT+TGG | - | chr3_2:88534006-88534025 | Msa0435390:intron | 40.0% | |
!! | CTTTGTGACTTGGACTAGTA+AGG | - | chr3_2:88534016-88534035 | Msa0435390:intron | 40.0% |
! | TGGGTCCTGTTTTGTGTTAA+TGG | - | chr3_2:88534079-88534098 | Msa0435390:intron | 40.0% |
! | CTCTACTTTGGTGCATTCTA+TGG | - | chr3_2:88534151-88534170 | Msa0435390:intron | 40.0% |
GCCATCACTATGCATATAAG+AGG | + | chr3_2:88534346-88534365 | None:intergenic | 40.0% | |
!! | CAAGTGTGTTTCTAGCAACT+AGG | - | chr3_2:88534375-88534394 | Msa0435390:intron | 40.0% |
! | CTTGGTTACACCTTTCTAGT+TGG | + | chr3_2:88534411-88534430 | None:intergenic | 40.0% |
! | CAACTAGAAAGGTGTAACCA+AGG | - | chr3_2:88534409-88534428 | Msa0435390:intron | 40.0% |
ATGGTTTCAACTAGCCAGAA+AGG | - | chr3_2:88534446-88534465 | Msa0435390:intron | 40.0% | |
! | ATGTTGTCAGGTAGGGTATT+TGG | - | chr3_2:88534562-88534581 | Msa0435390:intron | 40.0% |
ATGAAGATGGTACCATGCTT+TGG | - | chr3_2:88534695-88534714 | Msa0435390:intron | 40.0% | |
!! | GTTCTGAGCATTGGTATTGA+CGG | - | chr3_2:88534857-88534876 | Msa0435390:intron | 40.0% |
! | GTATTGACGGATCTTGCAAA+GGG | - | chr3_2:88534870-88534889 | Msa0435390:intron | 40.0% |
! | TATTGACGGATCTTGCAAAG+GGG | - | chr3_2:88534871-88534890 | Msa0435390:intron | 40.0% |
GTACAGCTTGGATCATTCTT+CGG | - | chr3_2:88534928-88534947 | Msa0435390:intron | 40.0% | |
GTAATTGGAGTCAAACCAAC+TGG | - | chr3_2:88535255-88535274 | Msa0435390:intron | 40.0% | |
CACCTCAAGTATTCTTGAAG+TGG | + | chr3_2:88535349-88535368 | None:intergenic | 40.0% | |
TAGCAAAAGGAAGCTTTCAC+TGG | - | chr3_2:88535386-88535405 | Msa0435390:intron | 40.0% | |
CCAACAGCCTGTTATCATTA+TGG | + | chr3_2:88535421-88535440 | None:intergenic | 40.0% | |
CCATAATGATAACAGGCTGT+TGG | - | chr3_2:88535418-88535437 | Msa0435390:intron | 40.0% | |
TCATTTCTTGTTACGCAACC+TGG | + | chr3_2:88535600-88535619 | None:intergenic | 40.0% | |
TTTACCTTAGGGTACATGTG+TGG | - | chr3_2:88535751-88535770 | Msa0435390:intron | 40.0% | |
ATCATCAAGAAATGTGGTGG+TGG | + | chr3_2:88535905-88535924 | None:intergenic | 40.0% | |
TGGATCATCAAGAAATGTGG+TGG | + | chr3_2:88535908-88535927 | None:intergenic | 40.0% | |
GTCACCTTATTGGCAGAATA+AGG | - | chr3_2:88536217-88536236 | Msa0435390:intron | 40.0% | |
!! | TTGAAAACATCGACTTACCG+TGG | + | chr3_2:88536295-88536314 | None:intergenic | 40.0% |
TGGCTAAGAATCAGAGTACG+GGG | - | chr3_2:88530262-88530281 | Msa0435390:three_prime_UTR | 45.0% | |
CATCTCCAAAGTGCAATAGC+AGG | + | chr3_2:88530930-88530949 | None:intergenic | 45.0% | |
! | CTGCTATTGCACTTTGGAGA+TGG | - | chr3_2:88530928-88530947 | Msa0435390:intron | 45.0% |
!! | ATCATATGTGGCTTTGTCGG+GGG | - | chr3_2:88531093-88531112 | Msa0435390:CDS | 45.0% |
TGATAGAACTGGTGAGCTTG+GGG | + | chr3_2:88531184-88531203 | None:intergenic | 45.0% | |
TTTCTTGTCAGGCATGTGCA+TGG | - | chr3_2:88531664-88531683 | Msa0435390:intron | 45.0% | |
GAGGATATTGACCCGAGTTT+AGG | + | chr3_2:88532000-88532019 | None:intergenic | 45.0% | |
GGGGACTGGGTATCAAATAT+GGG | + | chr3_2:88532086-88532105 | None:intergenic | 45.0% | |
TGGGGACTGGGTATCAAATA+TGG | + | chr3_2:88532087-88532106 | None:intergenic | 45.0% | |
CCATATAGAGTTTGGGGACT+GGG | + | chr3_2:88532099-88532118 | None:intergenic | 45.0% | |
AGGGAGCCATATAGAGTTTG+GGG | + | chr3_2:88532105-88532124 | None:intergenic | 45.0% | |
GAGGGAGCCATATAGAGTTT+GGG | + | chr3_2:88532106-88532125 | None:intergenic | 45.0% | |
AGAGGGAGCCATATAGAGTT+TGG | + | chr3_2:88532107-88532126 | None:intergenic | 45.0% | |
AGATTGGAATGCCGAGTTTG+GGG | + | chr3_2:88532153-88532172 | None:intergenic | 45.0% | |
AATCGCAACTCCCTAACAAC+AGG | + | chr3_2:88532291-88532310 | None:intergenic | 45.0% | |
TGAGTTTCATGACAGCCCAA+GGG | + | chr3_2:88532440-88532459 | None:intergenic | 45.0% | |
TTGAGTTTCATGACAGCCCA+AGG | + | chr3_2:88532441-88532460 | None:intergenic | 45.0% | |
GTTCCAACACCTTCATAAGG+AGG | + | chr3_2:88532622-88532641 | None:intergenic | 45.0% | |
TGTTTAGCAAGTGTCCAAGC+TGG | + | chr3_2:88532731-88532750 | None:intergenic | 45.0% | |
! | GCTTGGACACTTGCTAAACA+CGG | - | chr3_2:88532731-88532750 | Msa0435390:intron | 45.0% |
! | GACACTTGCTAAACACGGTT+TGG | - | chr3_2:88532736-88532755 | Msa0435390:intron | 45.0% |
!! | GCTAAACACGGTTTGGTGTT+TGG | - | chr3_2:88532743-88532762 | Msa0435390:intron | 45.0% |
CATACAAGGTCGTGTAGGTA+TGG | + | chr3_2:88532968-88532987 | None:intergenic | 45.0% | |
CATACCTACACGACCTTGTA+TGG | - | chr3_2:88532966-88532985 | Msa0435390:intron | 45.0% | |
CTATCCATACAAGGTCGTGT+AGG | + | chr3_2:88532973-88532992 | None:intergenic | 45.0% | |
CTAATACACCATAGACCACC+AGG | + | chr3_2:88533077-88533096 | None:intergenic | 45.0% | |
ACAGAGAACGTCACAGAATC+TGG | - | chr3_2:88533151-88533170 | Msa0435390:intron | 45.0% | |
CTGCAGTGTGTTTCATCTGT+AGG | + | chr3_2:88533611-88533630 | None:intergenic | 45.0% | |
TGAAAGGATAGTACGGTGTG+TGG | - | chr3_2:88533804-88533823 | Msa0435390:intron | 45.0% | |
GAAAGGATAGTACGGTGTGT+GGG | - | chr3_2:88533805-88533824 | Msa0435390:intron | 45.0% | |
!! | CTGTCTGGAAGTATCTACTG+TGG | - | chr3_2:88533930-88533949 | Msa0435390:intron | 45.0% |
TTACCCCTGGGCTGAAAATT+TGG | - | chr3_2:88533988-88534007 | Msa0435390:intron | 45.0% | |
! | ATGCCAAATTTTCAGCCCAG+GGG | + | chr3_2:88533994-88534013 | None:intergenic | 45.0% |
! | CATGCCAAATTTTCAGCCCA+GGG | + | chr3_2:88533995-88534014 | None:intergenic | 45.0% |
! | ACATGCCAAATTTTCAGCCC+AGG | + | chr3_2:88533996-88534015 | None:intergenic | 45.0% |
CTATGGCCATGAGCTAATCA+TGG | - | chr3_2:88534168-88534187 | Msa0435390:intron | 45.0% | |
CTATGACAATTGCCACGTTG+TGG | - | chr3_2:88534233-88534252 | Msa0435390:intron | 45.0% | |
!! | TACACCTTTCTAGTTGGCCA+TGG | + | chr3_2:88534405-88534424 | None:intergenic | 45.0% |
!! | TGATGTCGTGTCGCTGATTT+GGG | - | chr3_2:88534478-88534497 | Msa0435390:intron | 45.0% |
AAGATGGTACCATGCTTTGG+TGG | - | chr3_2:88534698-88534717 | Msa0435390:intron | 45.0% | |
AGATGGTACCATGCTTTGGT+GGG | - | chr3_2:88534699-88534718 | Msa0435390:intron | 45.0% | |
ACAGAACTTACTGGAACTCC+AGG | + | chr3_2:88534736-88534755 | None:intergenic | 45.0% | |
GTGAAATTCCATTCTGAGCC+AGG | - | chr3_2:88534754-88534773 | Msa0435390:intron | 45.0% | |
TGATGACTGATGTCGATACC+TGG | + | chr3_2:88534775-88534794 | None:intergenic | 45.0% | |
!! | GGTATTGACGGATCTTGCAA+AGG | - | chr3_2:88534869-88534888 | Msa0435390:intron | 45.0% |
! | ATTGACGGATCTTGCAAAGG+GGG | - | chr3_2:88534872-88534891 | Msa0435390:intron | 45.0% |
GAGGATTGTGATGTACAGCT+TGG | - | chr3_2:88534916-88534935 | Msa0435390:intron | 45.0% | |
TCAGTCTCTCTTTCTCTCTC+TGG | - | chr3_2:88535118-88535137 | Msa0435390:intron | 45.0% | |
GTATGAAGTCAACGACCAGT+TGG | + | chr3_2:88535273-88535292 | None:intergenic | 45.0% | |
TTGACCACACATGTACCCTA+AGG | + | chr3_2:88535758-88535777 | None:intergenic | 45.0% | |
GCATCTCAGGCATCTCAATT+CGG | - | chr3_2:88535804-88535823 | Msa0435390:CDS | 45.0% | |
! | GTTGCAGCAATTTTGCCATC+AGG | + | chr3_2:88535830-88535849 | None:intergenic | 45.0% |
!! | ATCAAGAAATGTGGTGGTGG+TGG | + | chr3_2:88535902-88535921 | None:intergenic | 45.0% |
ACGGACAGGTATTAAACAGC+GGG | + | chr3_2:88536199-88536218 | None:intergenic | 45.0% | |
GACGGACAGGTATTAAACAG+CGG | + | chr3_2:88536200-88536219 | None:intergenic | 45.0% | |
ATACCTGTCCGTCACCTTAT+TGG | - | chr3_2:88536207-88536226 | Msa0435390:intron | 45.0% | |
!! | CAATTAAATTAATAAATTAT+CGG | + | chr3_2:88536385-88536404 | None:intergenic | 5.0% |
AGAGTACGGGGTCAAAAGCA+GGG | - | chr3_2:88530274-88530293 | Msa0435390:three_prime_UTR | 50.0% | |
! | TGGTACACTTTTGCCGAGTC+TGG | - | chr3_2:88530824-88530843 | Msa0435390:intron | 50.0% |
CGTGCTGCATTATGAGTGAG+AGG | - | chr3_2:88531798-88531817 | Msa0435390:intron | 50.0% | |
CCCAGTCCCCAAACTCTATA+TGG | - | chr3_2:88532096-88532115 | Msa0435390:intron | 50.0% | |
GCCATATAGAGTTTGGGGAC+TGG | + | chr3_2:88532100-88532119 | None:intergenic | 50.0% | |
ATTGGAATGCCGAGTTTGGG+GGG | + | chr3_2:88532151-88532170 | None:intergenic | 50.0% | |
GATTGGAATGCCGAGTTTGG+GGG | + | chr3_2:88532152-88532171 | None:intergenic | 50.0% | |
TGTATTTGTGCGAGCGTGTG+CGG | - | chr3_2:88532203-88532222 | Msa0435390:CDS | 50.0% | |
TGTCATGTCCTGGTGGTCTA+TGG | - | chr3_2:88533066-88533085 | Msa0435390:intron | 50.0% | |
AACCTTCCAAATTCTGGGCC+TGG | - | chr3_2:88533702-88533721 | Msa0435390:intron | 50.0% | |
AACCAGGCCCAGAATTTGGA+AGG | + | chr3_2:88533707-88533726 | None:intergenic | 50.0% | |
TCCAAATTCTGGGCCTGGTT+TGG | - | chr3_2:88533707-88533726 | Msa0435390:intron | 50.0% | |
TCCAAACCAGGCCCAGAATT+TGG | + | chr3_2:88533711-88533730 | None:intergenic | 50.0% | |
GGTACTACGTTTGTGGGCTT+TGG | - | chr3_2:88533861-88533880 | Msa0435390:intron | 50.0% | |
TTTGTGGTCTGAGTTACCCC+TGG | - | chr3_2:88533975-88533994 | Msa0435390:intron | 50.0% | |
TTGTGGTCTGAGTTACCCCT+GGG | - | chr3_2:88533976-88533995 | Msa0435390:intron | 50.0% | |
AGTCTCAGACTCCCTGGAAA+TGG | + | chr3_2:88534123-88534142 | None:intergenic | 50.0% | |
! | TTCCAGGGAGTCTGAGACTT+CGG | - | chr3_2:88534124-88534143 | Msa0435390:intron | 50.0% |
! | GACTTCGGTGTGCTCTACTT+TGG | - | chr3_2:88534139-88534158 | Msa0435390:intron | 50.0% |
!! | TCTAGCAACTAGGAGTGCCA+TGG | - | chr3_2:88534385-88534404 | Msa0435390:intron | 50.0% |
AGTGCCATGGCCAACTAGAA+AGG | - | chr3_2:88534398-88534417 | Msa0435390:intron | 50.0% | |
CATGAGAAACGCAACACCCT+TGG | + | chr3_2:88534429-88534448 | None:intergenic | 50.0% | |
!! | CAAGGGTGTTGCGTTTCTCA+TGG | - | chr3_2:88534427-88534446 | Msa0435390:intron | 50.0% |
CATCACAGGTCACACCTTTC+TGG | + | chr3_2:88534463-88534482 | None:intergenic | 50.0% | |
AATCAGCGACACGACATCAC+AGG | + | chr3_2:88534477-88534496 | None:intergenic | 50.0% | |
! | GTGATGTCGTGTCGCTGATT+TGG | - | chr3_2:88534477-88534496 | Msa0435390:intron | 50.0% |
CCATGCTTTGGTGGGATGTA+CGG | - | chr3_2:88534707-88534726 | Msa0435390:intron | 50.0% | |
TGTCGATACCTGGCTCAGAA+TGG | + | chr3_2:88534765-88534784 | None:intergenic | 50.0% | |
!! | ATCTTGCAAAGGGGGCATCT+CGG | - | chr3_2:88534880-88534899 | Msa0435390:intron | 50.0% |
CTGGCACTTAGTAGCTACTC+TGG | + | chr3_2:88535581-88535600 | None:intergenic | 50.0% | |
CAGAGTAGCTACTAAGTGCC+AGG | - | chr3_2:88535579-88535598 | Msa0435390:intron | 50.0% | |
GAAATCACATTGGAGCGACC+TGG | - | chr3_2:88535782-88535801 | Msa0435390:intron | 50.0% | |
ATTGAGATGCCTGAGATGCC+AGG | + | chr3_2:88535803-88535822 | None:intergenic | 50.0% | |
GGCAAAATTGCTGCAACTGC+TGG | - | chr3_2:88535833-88535852 | Msa0435390:intron | 50.0% | |
AAATTGCTGCAACTGCTGGC+TGG | - | chr3_2:88535837-88535856 | Msa0435390:intron | 50.0% | |
! | AATTGCTGCAACTGCTGGCT+GGG | - | chr3_2:88535838-88535857 | Msa0435390:intron | 50.0% |
! | TATCCAGCCTTGTGCGAAGT+GGG | + | chr3_2:88536092-88536111 | None:intergenic | 50.0% |
! | ATATCCAGCCTTGTGCGAAG+TGG | + | chr3_2:88536093-88536112 | None:intergenic | 50.0% |
! | CAGCTAAGGCGTTTCCTTTG+CGG | + | chr3_2:88536254-88536273 | None:intergenic | 50.0% |
CAGAGTACGGGGTCAAAAGC+AGG | - | chr3_2:88530273-88530292 | Msa0435390:three_prime_UTR | 55.0% | |
GAGTACGGGGTCAAAAGCAG+GGG | - | chr3_2:88530275-88530294 | Msa0435390:three_prime_UTR | 55.0% | |
GAGGCCCTGCTATTGCACTT+TGG | - | chr3_2:88530922-88530941 | Msa0435390:intron | 55.0% | |
!! | GGGGAGAACTCTTCTGAGGT+AGG | - | chr3_2:88531112-88531131 | Msa0435390:CDS | 55.0% |
TGACAGCACTGTGGAACCTG+AGG | + | chr3_2:88531370-88531389 | None:intergenic | 55.0% | |
! | ATGGGAGTGTGACAGCACTG+TGG | + | chr3_2:88531379-88531398 | None:intergenic | 55.0% |
GCGGGTGAGTGACAAAGAGA+TGG | + | chr3_2:88531762-88531781 | None:intergenic | 55.0% | |
AGATCCCAACCCCCCAAACT+CGG | - | chr3_2:88532139-88532158 | Msa0435390:intron | 55.0% | |
AATGCCGAGTTTGGGGGGTT+GGG | + | chr3_2:88532146-88532165 | None:intergenic | 55.0% | |
GACAAACGGGGAGGAATGTC+TGG | + | chr3_2:88532687-88532706 | None:intergenic | 55.0% | |
CCGTACATCCCACCAAAGCA+TGG | + | chr3_2:88534710-88534729 | None:intergenic | 55.0% | |
TGGTGGGATGTACGGAATCC+TGG | - | chr3_2:88534715-88534734 | Msa0435390:intron | 55.0% | |
!! | TCTTGCAAAGGGGGCATCTC+GGG | - | chr3_2:88534881-88534900 | Msa0435390:intron | 55.0% |
GGCATCTCAATTCGGCCTGA+TGG | - | chr3_2:88535812-88535831 | Msa0435390:CDS | 55.0% | |
! | ATCCAGCCTTGTGCGAAGTG+GGG | + | chr3_2:88536091-88536110 | None:intergenic | 55.0% |
!! | CTGCCAATAAGGTGACGGAC+AGG | + | chr3_2:88536213-88536232 | None:intergenic | 55.0% |
! | CATTGTGTCGGCAGATGCAG+AGG | + | chr3_2:88536473-88536492 | None:intergenic | 55.0% |
CTCTGCATCTGCCGACACAA+TGG | - | chr3_2:88536471-88536490 | Msa0435390:intron | 55.0% | |
TGCATCTGCCGACACAATGG+TGG | - | chr3_2:88536474-88536493 | Msa0435390:intron | 55.0% | |
TACGGGGTCAAAAGCAGGGG+AGG | - | chr3_2:88530278-88530297 | Msa0435390:three_prime_UTR | 60.0% | |
GTCGGGGGAGAACTCTTCTG+AGG | - | chr3_2:88531108-88531127 | Msa0435390:CDS | 60.0% | |
GAATGCCGAGTTTGGGGGGT+TGG | + | chr3_2:88532147-88532166 | None:intergenic | 60.0% | |
CACCGAAGTCTCAGACTCCC+TGG | + | chr3_2:88534129-88534148 | None:intergenic | 60.0% | |
TCTCGGGAGCTGCAGATGAG+AGG | - | chr3_2:88534897-88534916 | Msa0435390:intron | 60.0% | |
TTGGAGCGACCTGGCATCTC+AGG | - | chr3_2:88535791-88535810 | Msa0435390:intron | 60.0% | |
CCACAGCGCCACCATTGTGT+CGG | + | chr3_2:88536485-88536504 | None:intergenic | 60.0% | |
! | CGACACAATGGTGGCGCTGT+GGG | - | chr3_2:88536483-88536502 | Msa0435390:intron | 60.0% |
! | CAACTGCTGGCTGGGACCAC+AGG | - | chr3_2:88535846-88535865 | Msa0435390:intron | 65.0% |
GTGCGAAGTGGGGCAGAGGA+TGG | + | chr3_2:88536081-88536100 | None:intergenic | 65.0% | |
CCTTGTGCGAAGTGGGGCAG+AGG | + | chr3_2:88536085-88536104 | None:intergenic | 65.0% | |
CCTCTGCCCCACTTCGCACA+AGG | - | chr3_2:88536082-88536101 | Msa0435390:intron | 65.0% | |
TGCCCCACTTCGCACAAGGC+TGG | - | chr3_2:88536086-88536105 | Msa0435390:intron | 65.0% | |
! | CCGACACAATGGTGGCGCTG+TGG | - | chr3_2:88536482-88536501 | Msa0435390:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 88530261 | 88536665 | 88530261 | ID=Msa0435390;Name=Msa0435390 |
chr3_2 | mRNA | 88530261 | 88536665 | 88530261 | ID=Msa0435390-mRNA-1;Parent=Msa0435390;Name=Msa0435390-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.5|0.44|1|1|1|9|137|248 |
chr3_2 | exon | 88530261 | 88530496 | 88530261 | ID=Msa0435390-mRNA-1:exon:26102;Parent=Msa0435390-mRNA-1 |
chr3_2 | exon | 88530630 | 88530693 | 88530630 | ID=Msa0435390-mRNA-1:exon:26101;Parent=Msa0435390-mRNA-1 |
chr3_2 | exon | 88531059 | 88531165 | 88531059 | ID=Msa0435390-mRNA-1:exon:26100;Parent=Msa0435390-mRNA-1 |
chr3_2 | exon | 88531977 | 88532068 | 88531977 | ID=Msa0435390-mRNA-1:exon:26099;Parent=Msa0435390-mRNA-1 |
chr3_2 | exon | 88532151 | 88532233 | 88532151 | ID=Msa0435390-mRNA-1:exon:26098;Parent=Msa0435390-mRNA-1 |
chr3_2 | exon | 88535185 | 88535251 | 88535185 | ID=Msa0435390-mRNA-1:exon:26097;Parent=Msa0435390-mRNA-1 |
chr3_2 | exon | 88535626 | 88535713 | 88535626 | ID=Msa0435390-mRNA-1:exon:26096;Parent=Msa0435390-mRNA-1 |
chr3_2 | exon | 88535797 | 88535837 | 88535797 | ID=Msa0435390-mRNA-1:exon:26095;Parent=Msa0435390-mRNA-1 |
chr3_2 | exon | 88536560 | 88536665 | 88536560 | ID=Msa0435390-mRNA-1:exon:26094;Parent=Msa0435390-mRNA-1 |
chr3_2 | CDS | 88536560 | 88536665 | 88536560 | ID=Msa0435390-mRNA-1:cds;Parent=Msa0435390-mRNA-1 |
chr3_2 | CDS | 88535797 | 88535837 | 88535797 | ID=Msa0435390-mRNA-1:cds;Parent=Msa0435390-mRNA-1 |
chr3_2 | CDS | 88535626 | 88535713 | 88535626 | ID=Msa0435390-mRNA-1:cds;Parent=Msa0435390-mRNA-1 |
chr3_2 | CDS | 88535185 | 88535251 | 88535185 | ID=Msa0435390-mRNA-1:cds;Parent=Msa0435390-mRNA-1 |
chr3_2 | CDS | 88532151 | 88532233 | 88532151 | ID=Msa0435390-mRNA-1:cds;Parent=Msa0435390-mRNA-1 |
chr3_2 | CDS | 88531977 | 88532068 | 88531977 | ID=Msa0435390-mRNA-1:cds;Parent=Msa0435390-mRNA-1 |
chr3_2 | CDS | 88531059 | 88531165 | 88531059 | ID=Msa0435390-mRNA-1:cds;Parent=Msa0435390-mRNA-1 |
chr3_2 | CDS | 88530630 | 88530693 | 88530630 | ID=Msa0435390-mRNA-1:cds;Parent=Msa0435390-mRNA-1 |
chr3_2 | CDS | 88530398 | 88530496 | 88530398 | ID=Msa0435390-mRNA-1:cds;Parent=Msa0435390-mRNA-1 |
chr3_2 | three_prime_UTR | 88530261 | 88530397 | 88530261 | ID=Msa0435390-mRNA-1:three_prime_utr;Parent=Msa0435390-mRNA-1 |
Gene Sequence |
Protein sequence |