Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980090 | PNX99521.1 | 71.010 | 614 | 152 | 4 | 3 | 616 | 46 | 633 | 0.0 | 860 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980090 | sp|Q9LKR4|FRS10_ARATH | 46.179 | 301 | 145 | 2 | 12 | 302 | 55 | 348 | 2.00e-84 | 281 |
| Msa0980090 | sp|Q9LKR4|FRS10_ARATH | 36.641 | 262 | 163 | 2 | 297 | 557 | 415 | 674 | 1.93e-50 | 189 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980090 | A0A2K3N8Z5 | 71.010 | 614 | 152 | 4 | 3 | 616 | 46 | 633 | 0.0 | 860 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0980090 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002670 | Msa0980090 | 0.855072 | 8.062665e-62 | -8.615850e-47 |
| Msa0002720 | Msa0980090 | 0.821670 | 3.568276e-53 | -8.615850e-47 |
| Msa0006070 | Msa0980090 | 0.805213 | 1.487837e-49 | -8.615850e-47 |
| Msa0013050 | Msa0980090 | -0.800016 | 1.756615e-48 | -8.615850e-47 |
| Msa0017510 | Msa0980090 | 0.827751 | 1.315884e-54 | -8.615850e-47 |
| Msa0021510 | Msa0980090 | 0.815055 | 1.124472e-51 | -8.615850e-47 |
| Msa0028700 | Msa0980090 | 0.899706 | 1.519093e-77 | -8.615850e-47 |
| Msa0032330 | Msa0980090 | 0.876035 | 1.923158e-68 | -8.615850e-47 |
| Msa0050390 | Msa0980090 | 0.816093 | 6.606529e-52 | -8.615850e-47 |
| Msa0062860 | Msa0980090 | 0.823134 | 1.631003e-53 | -8.615850e-47 |
| Msa0105070 | Msa0980090 | 0.811404 | 7.121564e-51 | -8.615850e-47 |
| Msa0107580 | Msa0980090 | 0.803291 | 3.739246e-49 | -8.615850e-47 |
| Msa0115270 | Msa0980090 | 0.820541 | 6.494979e-53 | -8.615850e-47 |
| Msa0116770 | Msa0980090 | 0.817307 | 3.530157e-52 | -8.615850e-47 |
| Msa0610430 | Msa0980090 | 0.803093 | 4.110070e-49 | -8.615850e-47 |
| Msa0615740 | Msa0980090 | 0.851662 | 7.667221e-61 | -8.615850e-47 |
| Msa0621490 | Msa0980090 | 0.802141 | 6.459423e-49 | -8.615850e-47 |
| Msa0623080 | Msa0980090 | 0.837931 | 3.884152e-57 | -8.615850e-47 |
| Msa0641670 | Msa0980090 | 0.800942 | 1.137392e-48 | -8.615850e-47 |
| Msa0661190 | Msa0980090 | -0.815365 | 9.597760e-52 | -8.615850e-47 |
| Msa0661650 | Msa0980090 | 0.806939 | 6.447051e-50 | -8.615850e-47 |
| Msa0673460 | Msa0980090 | 0.803156 | 3.987349e-49 | -8.615850e-47 |
| Msa0688480 | Msa0980090 | 0.805715 | 1.167574e-49 | -8.615850e-47 |
| Msa0689010 | Msa0980090 | 0.811658 | 6.271577e-51 | -8.615850e-47 |
| Msa0698920 | Msa0980090 | 0.812195 | 4.791063e-51 | -8.615850e-47 |
| Msa0701010 | Msa0980090 | 0.839478 | 1.546647e-57 | -8.615850e-47 |
| Msa0731940 | Msa0980090 | 0.812509 | 4.090784e-51 | -8.615850e-47 |
| Msa0735170 | Msa0980090 | 0.802121 | 6.518626e-49 | -8.615850e-47 |
| Msa0738500 | Msa0980090 | 0.874515 | 6.358132e-68 | -8.615850e-47 |
| Msa0743720 | Msa0980090 | 0.857662 | 1.401479e-62 | -8.615850e-47 |
| Msa0748020 | Msa0980090 | 0.808558 | 2.919782e-50 | -8.615850e-47 |
| Msa0791230 | Msa0980090 | 0.811620 | 6.392292e-51 | -8.615850e-47 |
| Msa0797170 | Msa0980090 | 0.807980 | 3.877385e-50 | -8.615850e-47 |
| Msa0828940 | Msa0980090 | 0.827212 | 1.772304e-54 | -8.615850e-47 |
| Msa0135380 | Msa0980090 | 0.818656 | 1.749710e-52 | -8.615850e-47 |
| Msa0150270 | Msa0980090 | 0.813285 | 2.765081e-51 | -8.615850e-47 |
| Msa0151850 | Msa0980090 | 0.803851 | 2.862083e-49 | -8.615850e-47 |
| Msa0157290 | Msa0980090 | 0.828289 | 9.764799e-55 | -8.615850e-47 |
| Msa0160550 | Msa0980090 | 0.802659 | 5.050422e-49 | -8.615850e-47 |
| Msa0165210 | Msa0980090 | 0.820420 | 6.924218e-53 | -8.615850e-47 |
| Msa0165220 | Msa0980090 | 0.831443 | 1.665002e-55 | -8.615850e-47 |
| Msa0173990 | Msa0980090 | 0.815953 | 7.097916e-52 | -8.615850e-47 |
| Msa0178960 | Msa0980090 | 0.866809 | 2.173006e-65 | -8.615850e-47 |
| Msa0178970 | Msa0980090 | 0.838175 | 3.362202e-57 | -8.615850e-47 |
| Msa0179280 | Msa0980090 | 0.803713 | 3.056441e-49 | -8.615850e-47 |
| Msa0180500 | Msa0980090 | 0.828892 | 6.982609e-55 | -8.615850e-47 |
| Msa0197660 | Msa0980090 | 0.825675 | 4.119534e-54 | -8.615850e-47 |
| Msa0215320 | Msa0980090 | -0.828997 | 6.585506e-55 | -8.615850e-47 |
| Msa0220740 | Msa0980090 | 0.803896 | 2.800288e-49 | -8.615850e-47 |
| Msa0223260 | Msa0980090 | 0.829611 | 4.671904e-55 | -8.615850e-47 |
| Msa0226890 | Msa0980090 | 0.804370 | 2.232302e-49 | -8.615850e-47 |
| Msa0392180 | Msa0980090 | 0.814611 | 1.410996e-51 | -8.615850e-47 |
| Msa0395790 | Msa0980090 | 0.810918 | 9.074716e-51 | -8.615850e-47 |
| Msa0397750 | Msa0980090 | 0.801975 | 6.986758e-49 | -8.615850e-47 |
| Msa0402790 | Msa0980090 | 0.801445 | 8.972590e-49 | -8.615850e-47 |
| Msa0406880 | Msa0980090 | 0.827807 | 1.275736e-54 | -8.615850e-47 |
| Msa0416650 | Msa0980090 | 0.821377 | 4.170401e-53 | -8.615850e-47 |
| Msa0419820 | Msa0980090 | 0.803606 | 3.217416e-49 | -8.615850e-47 |
| Msa0424320 | Msa0980090 | 0.836279 | 1.027308e-56 | -8.615850e-47 |
| Msa0432300 | Msa0980090 | 0.802917 | 4.467892e-49 | -8.615850e-47 |
| Msa0442850 | Msa0980090 | 0.806971 | 6.348279e-50 | -8.615850e-47 |
| Msa0466390 | Msa0980090 | 0.833200 | 6.112573e-56 | -8.615850e-47 |
| Msa0479340 | Msa0980090 | 0.810074 | 1.380873e-50 | -8.615850e-47 |
| Msa0480980 | Msa0980090 | 0.811287 | 7.550501e-51 | -8.615850e-47 |
| Msa0980090 | Msa0986360 | 0.807434 | 5.063607e-50 | -8.615850e-47 |
| Msa0980090 | Msa0991830 | 0.809708 | 1.655936e-50 | -8.615850e-47 |
| Msa0980090 | Msa0998690 | 0.824321 | 8.597394e-54 | -8.615850e-47 |
| Msa0980090 | Msa1000900 | 0.805818 | 1.111034e-49 | -8.615850e-47 |
| Msa0980090 | Msa1003620 | 0.814922 | 1.203729e-51 | -8.615850e-47 |
| Msa0980090 | Msa1014540 | 0.841197 | 5.500417e-58 | -8.615850e-47 |
| Msa0980090 | Msa1015490 | 0.802975 | 4.346145e-49 | -8.615850e-47 |
| Msa0980090 | Msa1029450 | 0.803420 | 3.516718e-49 | -8.615850e-47 |
| Msa0980090 | Msa1030970 | 0.817140 | 3.848595e-52 | -8.615850e-47 |
| Msa0980090 | Msa1037420 | 0.817729 | 2.835568e-52 | -8.615850e-47 |
| Msa0980090 | Msa1075220 | -0.809186 | 2.143058e-50 | -8.615850e-47 |
| Msa0980090 | Msa1075540 | 0.801948 | 7.075969e-49 | -8.615850e-47 |
| Msa0980090 | Msa1082580 | 0.811947 | 5.424616e-51 | -8.615850e-47 |
| Msa0980090 | Msa1085740 | 0.867351 | 1.458892e-65 | -8.615850e-47 |
| Msa0980090 | Msa1113170 | 0.807424 | 5.089499e-50 | -8.615850e-47 |
| Msa0980090 | Msa1114710 | 0.814049 | 1.877771e-51 | -8.615850e-47 |
| Msa0980090 | Msa1137570 | 0.810713 | 1.005379e-50 | -8.615850e-47 |
| Msa0980090 | Msa1156020 | 0.893029 | 9.194076e-75 | -8.615850e-47 |
| Msa0980090 | Msa1162550 | -0.802530 | 5.369593e-49 | -8.615850e-47 |
| Msa0980090 | Msa1181550 | 0.811034 | 8.567939e-51 | -8.615850e-47 |
| Msa0980090 | Msa1182090 | 0.805381 | 1.372137e-49 | -8.615850e-47 |
| Msa0980090 | Msa1186950 | -0.815060 | 1.121756e-51 | -8.615850e-47 |
| Msa0980090 | Msa1190400 | 0.834382 | 3.096279e-56 | -8.615850e-47 |
| Msa0980090 | Msa1199220 | 0.809917 | 1.492973e-50 | -8.615850e-47 |
| Msa0980090 | Msa1226660 | 0.811896 | 5.565415e-51 | -8.615850e-47 |
| Msa0980090 | Msa1230430 | 0.817332 | 3.484298e-52 | -8.615850e-47 |
| Msa0980090 | Msa1233890 | 0.814027 | 1.898775e-51 | -8.615850e-47 |
| Msa0980090 | Msa1238930 | 0.820285 | 7.435045e-53 | -8.615850e-47 |
| Msa0980090 | Msa1239530 | 0.802714 | 4.920280e-49 | -8.615850e-47 |
| Msa0980090 | Msa1244250 | 0.884658 | 1.588623e-71 | -8.615850e-47 |
| Msa0980090 | Msa1249490 | 0.848755 | 5.008417e-60 | -8.615850e-47 |
| Msa0980090 | Msa1271210 | 0.805471 | 1.313961e-49 | -8.615850e-47 |
| Msa0980090 | Msa1273230 | 0.805702 | 1.175111e-49 | -8.615850e-47 |
| Msa0980090 | Msa1273920 | 0.806571 | 7.710589e-50 | -8.615850e-47 |
| Msa0980090 | Msa1275360 | 0.807919 | 3.994048e-50 | -8.615850e-47 |
| Msa0980090 | Msa1277660 | 0.833156 | 6.270343e-56 | -8.615850e-47 |
| Msa0980090 | Msa1282580 | -0.804495 | 2.101714e-49 | -8.615850e-47 |
| Msa0980090 | Msa1284680 | 0.846753 | 1.781285e-59 | -8.615850e-47 |
| Msa0980090 | Msa1308620 | 0.803541 | 3.318538e-49 | -8.615850e-47 |
| Msa0980090 | Msa1336670 | 0.800295 | 1.541202e-48 | -8.615850e-47 |
| Msa0980090 | Msa1348950 | 0.838329 | 3.067967e-57 | -8.615850e-47 |
| Msa0980090 | Msa1351620 | 0.830625 | 2.642948e-55 | -8.615850e-47 |
| Msa0980090 | Msa1359040 | 0.800668 | 1.293583e-48 | -8.615850e-47 |
| Msa0980090 | Msa1362880 | 0.827434 | 1.568329e-54 | -8.615850e-47 |
| Msa0980090 | Msa1369530 | 0.822062 | 2.895587e-53 | -8.615850e-47 |
| Msa0980090 | Msa1402790 | 0.808153 | 3.561953e-50 | -8.615850e-47 |
| Msa0980090 | Msa1410100 | 0.802391 | 5.737325e-49 | -8.615850e-47 |
| Msa0980090 | Msa1411020 | 0.805454 | 1.324308e-49 | -8.615850e-47 |
| Msa0980090 | Msa1424290 | 0.801892 | 7.265603e-49 | -8.615850e-47 |
| Msa0980090 | Msa1427230 | 0.800132 | 1.663659e-48 | -8.615850e-47 |
| Msa0980090 | Msa1434350 | 0.802342 | 5.872616e-49 | -8.615850e-47 |
| Msa0980090 | Msa1439320 | 0.805262 | 1.453431e-49 | -8.615850e-47 |
| Msa0980090 | Msa1451620 | -0.810492 | 1.122049e-50 | -8.615850e-47 |
| Msa0980090 | Msa1455490 | 0.819328 | 1.230462e-52 | -8.615850e-47 |
| Msa0239800 | Msa0980090 | 0.822281 | 2.575546e-53 | -8.615850e-47 |
| Msa0241640 | Msa0980090 | 0.832351 | 9.931932e-56 | -8.615850e-47 |
| Msa0242270 | Msa0980090 | 0.818385 | 2.015552e-52 | -8.615850e-47 |
| Msa0277820 | Msa0980090 | 0.800999 | 1.107364e-48 | -8.615850e-47 |
| Msa0278110 | Msa0980090 | 0.819756 | 9.827881e-53 | -8.615850e-47 |
| Msa0279700 | Msa0980090 | 0.823404 | 1.411018e-53 | -8.615850e-47 |
| Msa0279790 | Msa0980090 | 0.853832 | 1.841264e-61 | -8.615850e-47 |
| Msa0294560 | Msa0980090 | -0.804466 | 2.131377e-49 | -8.615850e-47 |
| Msa0317290 | Msa0980090 | 0.873189 | 1.782433e-67 | -8.615850e-47 |
| Msa0317510 | Msa0980090 | 0.824579 | 7.476888e-54 | -8.615850e-47 |
| Msa0328810 | Msa0980090 | 0.801775 | 7.678040e-49 | -8.615850e-47 |
| Msa0340450 | Msa0980090 | 0.816125 | 6.498176e-52 | -8.615850e-47 |
| Msa0344830 | Msa0980090 | 0.832323 | 1.009189e-55 | -8.615850e-47 |
| Msa0348500 | Msa0980090 | 0.802343 | 5.869265e-49 | -8.615850e-47 |
| Msa0350990 | Msa0980090 | 0.847478 | 1.127543e-59 | -8.615850e-47 |
| Msa0351030 | Msa0980090 | 0.848139 | 7.412467e-60 | -8.615850e-47 |
| Msa0351080 | Msa0980090 | 0.814064 | 1.863336e-51 | -8.615850e-47 |
| Msa0351100 | Msa0980090 | 0.831408 | 1.698204e-55 | -8.615850e-47 |
| Msa0358170 | Msa0980090 | 0.802866 | 4.577095e-49 | -8.615850e-47 |
| Msa0512750 | Msa0980090 | 0.813753 | 2.181619e-51 | -8.615850e-47 |
| Msa0516750 | Msa0980090 | 0.873744 | 1.159719e-67 | -8.615850e-47 |
| Msa0519000 | Msa0980090 | 0.809046 | 2.296504e-50 | -8.615850e-47 |
| Msa0523940 | Msa0980090 | 0.861736 | 8.316614e-64 | -8.615850e-47 |
| Msa0529040 | Msa0980090 | 0.821746 | 3.426942e-53 | -8.615850e-47 |
| Msa0545700 | Msa0980090 | 0.810796 | 9.643260e-51 | -8.615850e-47 |
| Msa0562440 | Msa0980090 | 0.821111 | 4.803146e-53 | -8.615850e-47 |
| Msa0585230 | Msa0980090 | 0.800696 | 1.276906e-48 | -8.615850e-47 |
| Msa0593650 | Msa0980090 | 0.811328 | 7.397821e-51 | -8.615850e-47 |
| Msa0602390 | Msa0980090 | 0.800939 | 1.139038e-48 | -8.615850e-47 |
| Msa0842650 | Msa0980090 | 0.806202 | 9.225435e-50 | -8.615850e-47 |
| Msa0849030 | Msa0980090 | 0.815372 | 9.564755e-52 | -8.615850e-47 |
| Msa0857680 | Msa0980090 | 0.812560 | 3.987269e-51 | -8.615850e-47 |
| Msa0871270 | Msa0980090 | 0.800455 | 1.430031e-48 | -8.615850e-47 |
| Msa0877250 | Msa0980090 | 0.849956 | 2.317851e-60 | -8.615850e-47 |
| Msa0880140 | Msa0980090 | 0.823800 | 1.139364e-53 | -8.615850e-47 |
| Msa0885280 | Msa0980090 | 0.820355 | 7.164761e-53 | -8.615850e-47 |
| Msa0897330 | Msa0980090 | 0.812413 | 4.292224e-51 | -8.615850e-47 |
| Msa0897880 | Msa0980090 | 0.801275 | 9.722157e-49 | -8.615850e-47 |
| Msa0907070 | Msa0980090 | 0.813532 | 2.441202e-51 | -8.615850e-47 |
| Msa0917880 | Msa0980090 | 0.853029 | 3.129076e-61 | -8.615850e-47 |
| Msa0925250 | Msa0980090 | 0.810104 | 1.360775e-50 | -8.615850e-47 |
| Msa0925290 | Msa0980090 | 0.812072 | 5.095644e-51 | -8.615850e-47 |
| Msa0927380 | Msa0980090 | 0.812314 | 4.513212e-51 | -8.615850e-47 |
| Msa0936300 | Msa0980090 | 0.800119 | 1.673288e-48 | -8.615850e-47 |
| Msa0938220 | Msa0980090 | 0.805296 | 1.429384e-49 | -8.615850e-47 |
| Msa0953120 | Msa0980090 | 0.827894 | 1.215977e-54 | -8.615850e-47 |
| Msa0954910 | Msa0980090 | 0.822292 | 2.560933e-53 | -8.615850e-47 |
| Msa0958550 | Msa0980090 | 0.805047 | 1.611630e-49 | -8.615850e-47 |
| Msa0966750 | Msa0980090 | 0.801513 | 8.692180e-49 | -8.615850e-47 |
| Msa0974080 | Msa0980090 | 0.805575 | 1.249412e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980090 | MtrunA17_Chr5g0431001 | 89.965 | 289 | 29 | 0 | 1 | 289 | 50 | 338 | 0.0 | 538 |
| Msa0980090 | MtrunA17_Chr5g0431001 | 95.775 | 71 | 3 | 0 | 291 | 361 | 412 | 482 | 2.83e-38 | 148 |
| Msa0980090 | MtrunA17_Chr1g0198761 | 73.926 | 326 | 85 | 0 | 291 | 616 | 398 | 723 | 5.65e-172 | 508 |
| Msa0980090 | MtrunA17_Chr1g0198761 | 74.237 | 295 | 76 | 0 | 1 | 295 | 36 | 330 | 8.56e-155 | 463 |
| Msa0980090 | MtrunA17_Chr2g0276841 | 38.156 | 629 | 298 | 13 | 11 | 560 | 69 | 685 | 7.53e-139 | 420 |
| Msa0980090 | MtrunA17_Chr2g0290391 | 44.218 | 294 | 147 | 2 | 12 | 295 | 51 | 337 | 1.57e-77 | 260 |
| Msa0980090 | MtrunA17_Chr2g0290391 | 44.718 | 284 | 137 | 5 | 289 | 562 | 403 | 676 | 4.41e-66 | 229 |
| Msa0980090 | MtrunA17_Chr2g0294841 | 46.181 | 288 | 147 | 3 | 11 | 295 | 44 | 326 | 1.25e-76 | 259 |
| Msa0980090 | MtrunA17_Chr2g0294841 | 35.632 | 348 | 196 | 5 | 291 | 616 | 394 | 735 | 1.06e-64 | 226 |
| Msa0980090 | MtrunA17_Chr3g0081281 | 83.696 | 92 | 15 | 0 | 161 | 252 | 2 | 93 | 8.95e-47 | 159 |
| Msa0980090 | MtrunA17_Chr5g0448761 | 24.419 | 602 | 350 | 15 | 1 | 513 | 52 | 637 | 1.03e-35 | 143 |
| Msa0980090 | MtrunA17_Chr2g0287651 | 29.836 | 305 | 191 | 9 | 4 | 299 | 68 | 358 | 1.89e-31 | 130 |
| Msa0980090 | MtrunA17_Chr2g0287651 | 24.444 | 225 | 165 | 3 | 285 | 504 | 407 | 631 | 2.11e-11 | 67.0 |
| Msa0980090 | MtrunA17_Chr1g0203051 | 23.604 | 555 | 326 | 17 | 18 | 492 | 85 | 621 | 2.19e-31 | 129 |
| Msa0980090 | MtrunA17_Chr5g0430921 | 94.828 | 58 | 3 | 0 | 559 | 616 | 1 | 58 | 4.18e-31 | 116 |
| Msa0980090 | MtrunA17_Chr5g0441581 | 23.461 | 601 | 342 | 18 | 92 | 598 | 102 | 678 | 7.30e-30 | 125 |
| Msa0980090 | MtrunA17_Chr1g0202341 | 28.097 | 331 | 216 | 6 | 254 | 571 | 355 | 676 | 9.99e-29 | 121 |
| Msa0980090 | MtrunA17_Chr1g0202341 | 28.671 | 286 | 177 | 8 | 12 | 289 | 51 | 317 | 5.84e-25 | 110 |
| Msa0980090 | MtrunA17_Chr6g0458391 | 29.329 | 283 | 168 | 7 | 9 | 289 | 222 | 474 | 1.55e-27 | 118 |
| Msa0980090 | MtrunA17_Chr6g0458391 | 26.126 | 222 | 159 | 2 | 287 | 504 | 544 | 764 | 3.94e-19 | 91.7 |
| Msa0980090 | MtrunA17_Chr2g0287061 | 22.962 | 601 | 352 | 19 | 12 | 550 | 183 | 734 | 2.15e-26 | 114 |
| Msa0980090 | MtrunA17_Chr3g0080351 | 30.088 | 226 | 151 | 4 | 286 | 506 | 401 | 624 | 6.24e-26 | 113 |
| Msa0980090 | MtrunA17_Chr3g0080351 | 29.932 | 294 | 165 | 13 | 12 | 295 | 76 | 338 | 3.20e-21 | 98.6 |
| Msa0980090 | MtrunA17_Chr8g0363841 | 28.417 | 278 | 179 | 7 | 13 | 285 | 18 | 280 | 1.08e-25 | 112 |
| Msa0980090 | MtrunA17_Chr8g0363841 | 24.885 | 217 | 149 | 4 | 298 | 504 | 364 | 576 | 1.51e-15 | 80.1 |
| Msa0980090 | MtrunA17_Chr2g0296781 | 28.228 | 333 | 212 | 9 | 291 | 603 | 332 | 657 | 4.23e-25 | 110 |
| Msa0980090 | MtrunA17_Chr2g0296781 | 28.374 | 289 | 176 | 9 | 18 | 296 | 3 | 270 | 2.61e-23 | 104 |
| Msa0980090 | MtrunA17_Chr6g0477261 | 28.875 | 329 | 203 | 9 | 291 | 597 | 221 | 540 | 1.87e-24 | 108 |
| Msa0980090 | MtrunA17_Chr6g0477261 | 33.166 | 199 | 118 | 6 | 145 | 334 | 4 | 196 | 1.73e-20 | 95.9 |
| Msa0980090 | MtrunA17_Chr2g0329031 | 24.926 | 337 | 235 | 6 | 285 | 613 | 339 | 665 | 8.39e-24 | 106 |
| Msa0980090 | MtrunA17_Chr2g0329031 | 27.055 | 292 | 165 | 9 | 18 | 295 | 20 | 277 | 4.59e-18 | 88.2 |
| Msa0980090 | MtrunA17_Chr1g0207551 | 29.577 | 213 | 145 | 3 | 298 | 506 | 379 | 590 | 5.55e-22 | 100 |
| Msa0980090 | MtrunA17_Chr1g0207551 | 27.835 | 291 | 183 | 9 | 12 | 295 | 34 | 304 | 3.35e-18 | 89.0 |
| Msa0980090 | MtrunA17_Chr5g0440451 | 24.324 | 296 | 182 | 6 | 12 | 289 | 43 | 314 | 5.87e-22 | 100 |
| Msa0980090 | MtrunA17_Chr5g0440451 | 25.436 | 287 | 198 | 5 | 295 | 574 | 392 | 669 | 3.03e-21 | 98.6 |
| Msa0980090 | MtrunA17_Chr3g0082121 | 31.338 | 284 | 167 | 11 | 11 | 289 | 42 | 302 | 8.43e-22 | 100 |
| Msa0980090 | MtrunA17_Chr3g0082121 | 29.048 | 210 | 145 | 4 | 299 | 506 | 384 | 591 | 6.95e-19 | 90.9 |
| Msa0980090 | MtrunA17_Chr1g0203721 | 27.368 | 285 | 179 | 7 | 15 | 289 | 66 | 332 | 5.00e-21 | 97.8 |
| Msa0980090 | MtrunA17_Chr1g0203721 | 20.700 | 343 | 256 | 4 | 287 | 613 | 402 | 744 | 5.83e-18 | 88.2 |
| Msa0980090 | MtrunA17_Chr1g0196541 | 29.487 | 234 | 151 | 4 | 283 | 502 | 320 | 553 | 7.11e-20 | 94.0 |
| Msa0980090 | MtrunA17_Chr1g0196541 | 26.829 | 205 | 130 | 5 | 88 | 284 | 62 | 254 | 1.58e-14 | 77.0 |
| Msa0980090 | MtrunA17_Chr5g0448511 | 26.087 | 207 | 149 | 1 | 298 | 500 | 186 | 392 | 9.41e-20 | 93.2 |
| Msa0980090 | MtrunA17_Chr5g0448511 | 36.559 | 93 | 59 | 0 | 200 | 292 | 16 | 108 | 2.89e-13 | 72.8 |
| Msa0980090 | MtrunA17_Chr2g0291581 | 25.658 | 304 | 186 | 5 | 290 | 564 | 395 | 687 | 1.51e-19 | 92.8 |
| Msa0980090 | MtrunA17_Chr2g0291581 | 25.000 | 292 | 185 | 9 | 5 | 289 | 59 | 323 | 2.81e-15 | 79.3 |
| Msa0980090 | MtrunA17_Chr2g0324011 | 29.098 | 244 | 163 | 6 | 267 | 504 | 328 | 567 | 2.51e-19 | 92.0 |
| Msa0980090 | MtrunA17_Chr2g0324011 | 24.561 | 285 | 190 | 5 | 12 | 289 | 10 | 276 | 4.73e-18 | 87.8 |
| Msa0980090 | MtrunA17_Chr7g0258861 | 25.087 | 287 | 189 | 6 | 12 | 289 | 10 | 279 | 3.89e-19 | 88.6 |
| Msa0980090 | MtrunA17_Chr2g0308841 | 26.540 | 211 | 150 | 3 | 297 | 502 | 14 | 224 | 1.12e-18 | 86.3 |
| Msa0980090 | MtrunA17_Chr3g0118611 | 27.143 | 210 | 147 | 2 | 295 | 500 | 289 | 496 | 8.04e-18 | 87.8 |
| Msa0980090 | MtrunA17_Chr3g0118611 | 33.088 | 136 | 88 | 2 | 154 | 289 | 79 | 211 | 7.05e-16 | 81.3 |
| Msa0980090 | MtrunA17_Chr2g0291591 | 26.756 | 299 | 176 | 10 | 8 | 292 | 60 | 329 | 6.01e-16 | 81.3 |
| Msa0980090 | MtrunA17_Chr1g0164591 | 41.558 | 77 | 45 | 0 | 213 | 289 | 106 | 182 | 1.96e-13 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980090 | AT5G28530.5 | 37.258 | 569 | 320 | 11 | 12 | 558 | 55 | 608 | 1.09e-116 | 361 |
| Msa0980090 | AT5G28530.4 | 37.083 | 569 | 325 | 11 | 12 | 558 | 55 | 612 | 8.62e-116 | 358 |
| Msa0980090 | AT5G28530.1 | 46.179 | 301 | 145 | 2 | 12 | 302 | 55 | 348 | 2.03e-85 | 281 |
| Msa0980090 | AT5G28530.1 | 36.641 | 262 | 163 | 2 | 297 | 557 | 415 | 674 | 1.96e-51 | 189 |
| Msa0980090 | AT5G28530.3 | 46.179 | 301 | 145 | 2 | 12 | 302 | 55 | 348 | 2.05e-85 | 281 |
| Msa0980090 | AT5G28530.3 | 37.023 | 262 | 158 | 2 | 297 | 557 | 415 | 670 | 4.42e-52 | 190 |
| Msa0980090 | AT5G28530.2 | 46.179 | 301 | 145 | 2 | 12 | 302 | 55 | 348 | 2.05e-85 | 281 |
| Msa0980090 | AT5G28530.2 | 37.023 | 262 | 158 | 2 | 297 | 557 | 415 | 670 | 4.42e-52 | 190 |
| Msa0980090 | AT1G10240.2 | 47.213 | 305 | 149 | 5 | 2 | 300 | 33 | 331 | 2.42e-85 | 281 |
| Msa0980090 | AT1G10240.2 | 42.509 | 287 | 163 | 2 | 291 | 576 | 394 | 679 | 1.01e-72 | 247 |
| Msa0980090 | AT1G10240.1 | 47.213 | 305 | 149 | 5 | 2 | 300 | 33 | 331 | 2.42e-85 | 281 |
| Msa0980090 | AT1G10240.1 | 42.509 | 287 | 163 | 2 | 291 | 576 | 394 | 679 | 1.01e-72 | 247 |
| Msa0980090 | AT4G38180.1 | 29.682 | 283 | 187 | 4 | 12 | 292 | 73 | 345 | 2.35e-29 | 124 |
| Msa0980090 | AT4G38180.1 | 30.841 | 214 | 144 | 1 | 295 | 504 | 420 | 633 | 7.77e-26 | 113 |
| Msa0980090 | AT4G15090.1 | 26.496 | 351 | 230 | 9 | 276 | 606 | 373 | 715 | 1.06e-27 | 119 |
| Msa0980090 | AT4G15090.1 | 26.923 | 286 | 189 | 6 | 12 | 292 | 51 | 321 | 3.77e-22 | 102 |
| Msa0980090 | AT4G15090.5 | 26.496 | 351 | 230 | 9 | 276 | 606 | 373 | 715 | 1.06e-27 | 119 |
| Msa0980090 | AT4G15090.5 | 26.923 | 286 | 189 | 6 | 12 | 292 | 51 | 321 | 3.77e-22 | 102 |
| Msa0980090 | AT4G15090.3 | 26.496 | 351 | 230 | 9 | 276 | 606 | 373 | 715 | 1.06e-27 | 119 |
| Msa0980090 | AT4G15090.3 | 26.923 | 286 | 189 | 6 | 12 | 292 | 51 | 321 | 3.77e-22 | 102 |
| Msa0980090 | AT4G15090.2 | 26.496 | 351 | 230 | 9 | 276 | 606 | 373 | 715 | 1.06e-27 | 119 |
| Msa0980090 | AT4G15090.2 | 26.923 | 286 | 189 | 6 | 12 | 292 | 51 | 321 | 3.77e-22 | 102 |
| Msa0980090 | AT4G15090.4 | 26.496 | 351 | 230 | 9 | 276 | 606 | 373 | 715 | 1.06e-27 | 119 |
| Msa0980090 | AT4G15090.4 | 26.923 | 286 | 189 | 6 | 12 | 292 | 51 | 321 | 3.77e-22 | 102 |
| Msa0980090 | AT4G38170.1 | 30.455 | 220 | 149 | 2 | 291 | 506 | 181 | 400 | 5.16e-26 | 112 |
| Msa0980090 | AT3G22170.2 | 26.950 | 282 | 186 | 8 | 286 | 558 | 396 | 666 | 1.32e-23 | 106 |
| Msa0980090 | AT3G22170.2 | 26.190 | 294 | 177 | 11 | 12 | 295 | 70 | 333 | 6.65e-18 | 88.6 |
| Msa0980090 | AT3G22170.1 | 26.950 | 282 | 186 | 8 | 286 | 558 | 396 | 666 | 1.32e-23 | 106 |
| Msa0980090 | AT3G22170.1 | 26.190 | 294 | 177 | 11 | 12 | 295 | 70 | 333 | 6.65e-18 | 88.6 |
| Msa0980090 | AT1G76320.3 | 26.267 | 217 | 159 | 1 | 285 | 500 | 323 | 539 | 2.96e-22 | 102 |
| Msa0980090 | AT1G76320.3 | 26.224 | 286 | 176 | 10 | 18 | 295 | 3 | 261 | 6.28e-19 | 91.3 |
| Msa0980090 | AT1G76320.2 | 26.267 | 217 | 159 | 1 | 285 | 500 | 323 | 539 | 3.28e-22 | 102 |
| Msa0980090 | AT1G76320.2 | 26.224 | 286 | 176 | 10 | 18 | 295 | 3 | 261 | 4.85e-19 | 92.0 |
| Msa0980090 | AT1G76320.1 | 26.267 | 217 | 159 | 1 | 285 | 500 | 323 | 539 | 3.29e-22 | 102 |
| Msa0980090 | AT1G76320.1 | 26.224 | 286 | 176 | 10 | 18 | 295 | 3 | 261 | 4.91e-19 | 92.0 |
| Msa0980090 | AT1G76320.4 | 26.267 | 217 | 159 | 1 | 285 | 500 | 323 | 539 | 3.29e-22 | 102 |
| Msa0980090 | AT1G76320.4 | 26.224 | 286 | 176 | 10 | 18 | 295 | 3 | 261 | 4.91e-19 | 92.0 |
| Msa0980090 | AT4G19990.3 | 25.664 | 226 | 161 | 3 | 285 | 504 | 334 | 558 | 4.93e-20 | 95.1 |
| Msa0980090 | AT4G19990.4 | 25.664 | 226 | 161 | 3 | 285 | 504 | 334 | 558 | 4.93e-20 | 95.1 |
| Msa0980090 | AT4G19990.1 | 25.664 | 226 | 161 | 3 | 285 | 504 | 277 | 501 | 5.08e-20 | 94.7 |
| Msa0980090 | AT4G19990.5 | 25.664 | 226 | 161 | 3 | 285 | 504 | 334 | 558 | 5.10e-20 | 95.1 |
| Msa0980090 | AT4G19990.7 | 25.664 | 226 | 161 | 3 | 285 | 504 | 348 | 572 | 5.29e-20 | 95.1 |
| Msa0980090 | AT2G27110.2 | 26.592 | 267 | 181 | 7 | 295 | 554 | 367 | 625 | 5.94e-20 | 95.1 |
| Msa0980090 | AT2G27110.2 | 24.832 | 298 | 177 | 8 | 5 | 292 | 32 | 292 | 6.05e-18 | 88.6 |
| Msa0980090 | AT2G27110.1 | 26.592 | 267 | 181 | 7 | 295 | 554 | 367 | 625 | 5.94e-20 | 95.1 |
| Msa0980090 | AT2G27110.1 | 24.832 | 298 | 177 | 8 | 5 | 292 | 32 | 292 | 6.05e-18 | 88.6 |
| Msa0980090 | AT2G27110.3 | 27.341 | 267 | 179 | 8 | 295 | 554 | 222 | 480 | 6.96e-20 | 94.4 |
| Msa0980090 | AT2G27110.3 | 35.294 | 102 | 64 | 1 | 191 | 292 | 48 | 147 | 7.61e-15 | 78.6 |
| Msa0980090 | AT4G19990.6 | 25.664 | 226 | 161 | 3 | 285 | 504 | 334 | 558 | 7.19e-20 | 94.7 |
| Msa0980090 | AT4G19990.2 | 25.664 | 226 | 161 | 3 | 285 | 504 | 334 | 558 | 7.19e-20 | 94.7 |
| Msa0980090 | AT5G18960.2 | 25.271 | 277 | 191 | 5 | 291 | 561 | 513 | 779 | 8.70e-20 | 94.4 |
| Msa0980090 | AT5G18960.1 | 25.271 | 277 | 191 | 5 | 291 | 561 | 513 | 779 | 8.70e-20 | 94.4 |
| Msa0980090 | AT1G52520.1 | 27.197 | 239 | 142 | 5 | 287 | 503 | 408 | 636 | 3.03e-18 | 89.4 |
| Msa0980090 | AT3G06250.2 | 23.636 | 220 | 161 | 2 | 291 | 506 | 489 | 705 | 7.62e-18 | 88.2 |
| Msa0980090 | AT3G06250.1 | 23.636 | 220 | 161 | 2 | 291 | 506 | 489 | 705 | 7.62e-18 | 88.2 |
| Msa0980090 | AT3G06250.3 | 23.636 | 220 | 161 | 2 | 291 | 506 | 489 | 705 | 7.62e-18 | 88.2 |
| Msa0980090 | AT2G32250.5 | 24.088 | 274 | 198 | 3 | 300 | 570 | 345 | 611 | 2.32e-17 | 86.7 |
| Msa0980090 | AT2G32250.2 | 24.088 | 274 | 198 | 3 | 300 | 570 | 345 | 611 | 2.42e-17 | 86.7 |
| Msa0980090 | AT2G32250.4 | 24.088 | 274 | 198 | 3 | 300 | 570 | 345 | 611 | 2.42e-17 | 86.7 |
| Msa0980090 | AT2G32250.6 | 24.088 | 274 | 198 | 3 | 300 | 570 | 345 | 611 | 2.53e-17 | 86.7 |
| Msa0980090 | AT2G32250.1 | 24.088 | 274 | 198 | 3 | 300 | 570 | 345 | 611 | 2.53e-17 | 86.7 |
| Msa0980090 | AT2G32250.3 | 24.088 | 274 | 198 | 3 | 300 | 570 | 345 | 611 | 2.53e-17 | 86.7 |
| Msa0980090 | AT2G32250.8 | 24.088 | 274 | 198 | 3 | 300 | 570 | 304 | 570 | 2.69e-17 | 86.3 |
| Msa0980090 | AT2G32250.7 | 24.088 | 274 | 198 | 3 | 300 | 570 | 304 | 570 | 3.07e-17 | 86.3 |
| Msa0980090 | AT1G80010.1 | 26.695 | 236 | 137 | 8 | 291 | 503 | 437 | 659 | 7.66e-14 | 75.5 |
| Msa0980090 | AT1G80010.1 | 24.026 | 308 | 172 | 9 | 12 | 292 | 95 | 367 | 1.34e-12 | 71.2 |
Find 94 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATTACATGACTAGATTT+TGG | 0.131548 | 6_4:+18006935 | None:intergenic |
| TCTTTACCCATCGTAAATTT+TGG | 0.158198 | 6_4:-18007567 | Msa0980090:CDS |
| ATGAGATGCCTCTTGGAATA+TGG | 0.196486 | 6_4:-18007759 | Msa0980090:CDS |
| TTCTCACAACCACGAGTTAT+TGG | 0.199264 | 6_4:-18008181 | Msa0980090:CDS |
| ATTACATGTTCTTGAGTTTC+AGG | 0.207241 | 6_4:+18006779 | None:intergenic |
| CTCATGTTGAAGCAACTTAA+AGG | 0.248230 | 6_4:+18007213 | None:intergenic |
| TGTTTATTTGCAAAACAAAA+TGG | 0.260407 | 6_4:-18008447 | Msa0980090:CDS |
| AAAATCTGTCAAACTTGTTT+TGG | 0.261322 | 6_4:+18007450 | None:intergenic |
| ATTCGTGCATATGAAGCTTT+TGG | 0.265394 | 6_4:-18007823 | Msa0980090:CDS |
| CAATATGAATTCACAATTGA+TGG | 0.266214 | 6_4:-18007889 | Msa0980090:CDS |
| TCAAGAACATGTAATTGATT+TGG | 0.303083 | 6_4:-18006771 | Msa0980090:CDS |
| CGAAATGAGAAGATTTCTTC+AGG | 0.307997 | 6_4:-18007685 | Msa0980090:CDS |
| AATATCATCATAAAGATAAA+AGG | 0.310779 | 6_4:-18006806 | Msa0980090:CDS |
| CATCAATTGTGAATTCATAT+TGG | 0.326055 | 6_4:+18007890 | None:intergenic |
| GCAGCTTCAACCCCTCCTTT+TGG | 0.339248 | 6_4:+18006665 | None:intergenic |
| ATTCAATCATATAGTGGTAT+TGG | 0.341059 | 6_4:-18007979 | Msa0980090:CDS |
| ACTCTCGCTATAAGACTTAC+AGG | 0.343612 | 6_4:+18008069 | None:intergenic |
| CAAATTGGAGCATATTGTTT+GGG | 0.347369 | 6_4:-18007860 | Msa0980090:CDS |
| GAGCATATTGTTTGGGCATT+TGG | 0.348974 | 6_4:-18007853 | Msa0980090:CDS |
| ACAAATTGGAGCATATTGTT+TGG | 0.352856 | 6_4:-18007861 | Msa0980090:CDS |
| AATTGATGGAAGTAACAAAT+TGG | 0.358783 | 6_4:-18007875 | Msa0980090:CDS |
| ATGACAACGACGAGGCTTCT+TGG | 0.366012 | 6_4:+18006643 | None:intergenic |
| TCAGTCTCTAATTCGATGTT+TGG | 0.372448 | 6_4:-18006885 | Msa0980090:CDS |
| AACGTCACAGTCAGCATTGT+TGG | 0.377007 | 6_4:+18006736 | None:intergenic |
| ATGGTCTCACAGTTTGGTTT+GGG | 0.387072 | 6_4:-18007613 | Msa0980090:CDS |
| GTAGTTACTAAGAGAAGAAT+TGG | 0.389295 | 6_4:-18008240 | Msa0980090:CDS |
| AATGGTCTCACAGTTTGGTT+TGG | 0.398201 | 6_4:-18007614 | Msa0980090:CDS |
| TTTGCTGGAATGACAACAAC+AGG | 0.405299 | 6_4:-18007517 | Msa0980090:CDS |
| ATCCATCGGGTGTTTATAAG+AGG | 0.417116 | 6_4:-18008368 | Msa0980090:CDS |
| AAAGTAATGGTCTCACAGTT+TGG | 0.427267 | 6_4:-18007619 | Msa0980090:CDS |
| TGAGATGCCTCTTGGAATAT+GGG | 0.433904 | 6_4:-18007758 | Msa0980090:CDS |
| TTGGGCCTTAGCTTATTTGA+AGG | 0.435274 | 6_4:-18007548 | Msa0980090:CDS |
| TATACGACCACCATCAACTT+TGG | 0.437731 | 6_4:+18007123 | None:intergenic |
| GACGAGGCATGTTCTTCAAT+AGG | 0.443666 | 6_4:+18007253 | None:intergenic |
| TGATTAGTTCCACCACAATC+TGG | 0.446933 | 6_4:+18006617 | None:intergenic |
| AACCGTTATGAGATGCCTCT+TGG | 0.448749 | 6_4:-18007766 | Msa0980090:CDS |
| AAAGACAAGTGAACGAGAAC+AGG | 0.453486 | 6_4:-18006849 | Msa0980090:CDS |
| CATGTAATAAACTGCAATGA+TGG | 0.453622 | 6_4:-18006923 | Msa0980090:CDS |
| GTTTGTCATCGTGGTGGTAT+TGG | 0.458689 | 6_4:-18008339 | Msa0980090:CDS |
| ATGCGATCTTGATCAACAAT+TGG | 0.465554 | 6_4:+18008117 | None:intergenic |
| CTCACAGTTTGGTTTGGGTG+TGG | 0.468983 | 6_4:-18007608 | Msa0980090:CDS |
| ATAACGGTTTATTCTATATG+TGG | 0.472493 | 6_4:+18007780 | None:intergenic |
| TATAAGACTTACAGGGCAAC+CGG | 0.483233 | 6_4:+18008077 | None:intergenic |
| AAAACAAAAGGTCGGCCAAA+AGG | 0.495104 | 6_4:-18006695 | Msa0980090:CDS |
| TGAAGCAACTTAAAGGCATA+AGG | 0.499495 | 6_4:+18007220 | None:intergenic |
| CGTTGTCATGTTCCAGATTG+TGG | 0.504732 | 6_4:-18006629 | None:intergenic |
| AATTGTGAATTCATATTGGA+AGG | 0.507660 | 6_4:+18007894 | None:intergenic |
| CCAAAAGGATCAAGACCAAA+AGG | 0.514192 | 6_4:-18006680 | Msa0980090:CDS |
| CTTTCTCGTCTCCATCGAAA+AGG | 0.515070 | 6_4:+18006968 | None:intergenic |
| GTCAAAATTAGAAATCAAGC+TGG | 0.517568 | 6_4:-18007331 | Msa0980090:CDS |
| ATTGGAATGTTACGATAAGC+AGG | 0.522557 | 6_4:+18008135 | None:intergenic |
| ACATGTAATTGATTTGGAAG+AGG | 0.525138 | 6_4:-18006765 | Msa0980090:CDS |
| ATGTTATTGACTTGAGGCAA+GGG | 0.525418 | 6_4:+18008534 | None:intergenic |
| ACCACGCAAAACTGTTGAAG+TGG | 0.526679 | 6_4:-18008313 | Msa0980090:CDS |
| TGGGTTGGTGTTGATAATCA+TGG | 0.529258 | 6_4:-18007739 | Msa0980090:CDS |
| ATACTATTATTGTCTAAAGC+CGG | 0.531055 | 6_4:-18008096 | Msa0980090:CDS |
| TTCCAAGAGGCATCTCATAA+CGG | 0.531646 | 6_4:+18007764 | None:intergenic |
| CAACATCATACCAAAGTTGA+TGG | 0.538288 | 6_4:-18007133 | Msa0980090:CDS |
| TGAACGAGAATGGAAAGTAA+TGG | 0.544871 | 6_4:-18007632 | Msa0980090:CDS |
| TTGCACAACATAAGAGCCAT+TGG | 0.551354 | 6_4:+18007153 | None:intergenic |
| TAAGAGAAGAATTGGCATTG+AGG | 0.553953 | 6_4:-18008232 | Msa0980090:CDS |
| CAAGTCAATAACATTGATGA+GGG | 0.558520 | 6_4:-18008525 | Msa0980090:CDS |
| AAAGTCCTTCAAATAAGCTA+AGG | 0.560983 | 6_4:+18007543 | None:intergenic |
| GGAAAATGTGTTGTAATCTG+AGG | 0.568974 | 6_4:+18007274 | None:intergenic |
| ATGTGATTGTAGTGCAAAGA+TGG | 0.570079 | 6_4:-18008262 | Msa0980090:CDS |
| GTGTCTGAAGAGAATCCATC+GGG | 0.572540 | 6_4:-18008381 | Msa0980090:CDS |
| TCATCAATGTTATTGACTTG+AGG | 0.573525 | 6_4:+18008528 | None:intergenic |
| TAGAAATCAAGCTGGAGAAG+AGG | 0.577533 | 6_4:-18007323 | Msa0980090:CDS |
| CGAGTTATTGGATGACAAAG+AGG | 0.580002 | 6_4:-18008169 | Msa0980090:CDS |
| AATGTTATTGACTTGAGGCA+AGG | 0.580693 | 6_4:+18008533 | None:intergenic |
| AGGGAATTTGTTTGTCATCG+TGG | 0.598966 | 6_4:-18008348 | Msa0980090:CDS |
| TGTGTCTGAAGAGAATCCAT+CGG | 0.599444 | 6_4:-18008382 | Msa0980090:CDS |
| TCCCTCTTATAAACACCCGA+TGG | 0.599604 | 6_4:+18008366 | None:intergenic |
| TCAAGTCAATAACATTGATG+AGG | 0.603097 | 6_4:-18008526 | Msa0980090:CDS |
| CTGTTGAAGTGGAAAATCAA+AGG | 0.606328 | 6_4:-18008302 | Msa0980090:CDS |
| TTAGAGAAAAGAACAGACAC+AGG | 0.606382 | 6_4:-18008039 | Msa0980090:CDS |
| CTTTGTCATCCAATAACTCG+TGG | 0.606716 | 6_4:+18008172 | None:intergenic |
| AAGGATCAAGACCAAAAGGA+GGG | 0.611165 | 6_4:-18006676 | Msa0980090:CDS |
| GCAGCAATTGAAGCTGCCAA+TGG | 0.612688 | 6_4:-18007169 | Msa0980090:CDS |
| CTAAGGCCCAAAATTTACGA+TGG | 0.615020 | 6_4:+18007560 | None:intergenic |
| TAAGGCCCAAAATTTACGAT+GGG | 0.615697 | 6_4:+18007561 | None:intergenic |
| ATGCCTCTTGGAATATGGGT+TGG | 0.616141 | 6_4:-18007754 | Msa0980090:CDS |
| GAATTTGTTTGTCATCGTGG+TGG | 0.618777 | 6_4:-18008345 | Msa0980090:CDS |
| TCCATCGGGTGTTTATAAGA+GGG | 0.625908 | 6_4:-18008367 | Msa0980090:CDS |
| CTCTCGCTATAAGACTTACA+GGG | 0.647869 | 6_4:+18008070 | None:intergenic |
| AAAGGATCAAGACCAAAAGG+AGG | 0.655085 | 6_4:-18006677 | Msa0980090:CDS |
| TAGAGACTGAAATTTAGCAG+AGG | 0.662901 | 6_4:+18006898 | None:intergenic |
| ACACCAACCCATATTCCAAG+AGG | 0.676376 | 6_4:+18007751 | None:intergenic |
| AAGTTTGAAAGATCGAGATG+AGG | 0.682349 | 6_4:-18007917 | Msa0980090:CDS |
| CATCATACCAAAGTTGATGG+TGG | 0.683172 | 6_4:-18007130 | Msa0980090:CDS |
| AGGATCAAGACCAAAAGGAG+GGG | 0.696841 | 6_4:-18006675 | Msa0980090:CDS |
| AAGTCAATAACATTGATGAG+GGG | 0.714581 | 6_4:-18008524 | Msa0980090:CDS |
| ATAAGGTGTGAGTATAGACG+AGG | 0.720548 | 6_4:+18007237 | None:intergenic |
| TCTGGAACATGACAACGACG+AGG | 0.797744 | 6_4:+18006635 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTATTCAATCATATAG+TGG | - | chr6_4:18007177-18007196 | Msa0980090:CDS | 15.0% |
| !! | AATATCATCATAAAGATAAA+AGG | - | chr6_4:18008356-18008375 | Msa0980090:CDS | 15.0% |
| !!! | AATTTTATTCAATCATATAG+TGG | - | chr6_4:18007177-18007196 | Msa0980090:CDS | 15.0% |
| !! | AATATCATCATAAAGATAAA+AGG | - | chr6_4:18008356-18008375 | Msa0980090:CDS | 15.0% |
| !! | TGTTTATTTGCAAAACAAAA+TGG | - | chr6_4:18006715-18006734 | Msa0980090:CDS | 20.0% |
| !!! | AACAAAATGGATTTTCTATT+AGG | - | chr6_4:18006728-18006747 | Msa0980090:CDS | 20.0% |
| !!! | CTAATATCTTTTTCTAAGAA+TGG | + | chr6_4:18007156-18007175 | None:intergenic | 20.0% |
| !!! | CATGGAAATTCAATTTTTTT+TGG | - | chr6_4:18007441-18007460 | Msa0980090:CDS | 20.0% |
| !!! | TGATTGTTATATTTTTGTGT+AGG | - | chr6_4:18007797-18007816 | Msa0980090:CDS | 20.0% |
| !!! | TTATTACATGACTAGATTTT+GGG | + | chr6_4:18008229-18008248 | None:intergenic | 20.0% |
| !!! | TTTATTACATGACTAGATTT+TGG | + | chr6_4:18008230-18008249 | None:intergenic | 20.0% |
| !! | TGTTTATTTGCAAAACAAAA+TGG | - | chr6_4:18006715-18006734 | Msa0980090:CDS | 20.0% |
| !!! | AACAAAATGGATTTTCTATT+AGG | - | chr6_4:18006728-18006747 | Msa0980090:CDS | 20.0% |
| !!! | CTAATATCTTTTTCTAAGAA+TGG | + | chr6_4:18007156-18007175 | None:intergenic | 20.0% |
| !!! | CATGGAAATTCAATTTTTTT+TGG | - | chr6_4:18007441-18007460 | Msa0980090:CDS | 20.0% |
| !!! | TGATTGTTATATTTTTGTGT+AGG | - | chr6_4:18007797-18007816 | Msa0980090:CDS | 20.0% |
| !!! | TTATTACATGACTAGATTTT+GGG | + | chr6_4:18008229-18008248 | None:intergenic | 20.0% |
| !!! | TTTATTACATGACTAGATTT+TGG | + | chr6_4:18008230-18008249 | None:intergenic | 20.0% |
| !! | TCAAATATTTTCCCTTCAAA+AGG | + | chr6_4:18006667-18006686 | None:intergenic | 25.0% |
| !! | ATACTATTATTGTCTAAAGC+CGG | - | chr6_4:18007066-18007085 | Msa0980090:CDS | 25.0% |
| ! | ATTCAATCATATAGTGGTAT+TGG | - | chr6_4:18007183-18007202 | Msa0980090:CDS | 25.0% |
| ! | AATTGTGAATTCATATTGGA+AGG | + | chr6_4:18007271-18007290 | None:intergenic | 25.0% |
| ! | CATCAATTGTGAATTCATAT+TGG | + | chr6_4:18007275-18007294 | None:intergenic | 25.0% |
| ! | CAATATGAATTCACAATTGA+TGG | - | chr6_4:18007273-18007292 | Msa0980090:CDS | 25.0% |
| ! | AATTGATGGAAGTAACAAAT+TGG | - | chr6_4:18007287-18007306 | Msa0980090:CDS | 25.0% |
| ! | ATAACGGTTTATTCTATATG+TGG | + | chr6_4:18007385-18007404 | None:intergenic | 25.0% |
| !!! | AAAATCTGTCAAACTTGTTT+TGG | + | chr6_4:18007715-18007734 | None:intergenic | 25.0% |
| !!! | TGTTATATTTTTGTGTAGGT+TGG | - | chr6_4:18007801-18007820 | Msa0980090:CDS | 25.0% |
| !! | TGTAAAGAGTTTCAATTTTC+AGG | - | chr6_4:18008101-18008120 | Msa0980090:CDS | 25.0% |
| ! | TCAAGAACATGTAATTGATT+TGG | - | chr6_4:18008391-18008410 | Msa0980090:CDS | 25.0% |
| ! | TTGTTTCAAAAACAAAAGGT+CGG | - | chr6_4:18008459-18008478 | Msa0980090:CDS | 25.0% |
| !! | TCAAATATTTTCCCTTCAAA+AGG | + | chr6_4:18006667-18006686 | None:intergenic | 25.0% |
| !! | ATACTATTATTGTCTAAAGC+CGG | - | chr6_4:18007066-18007085 | Msa0980090:CDS | 25.0% |
| ! | ATTCAATCATATAGTGGTAT+TGG | - | chr6_4:18007183-18007202 | Msa0980090:CDS | 25.0% |
| ! | AATTGTGAATTCATATTGGA+AGG | + | chr6_4:18007271-18007290 | None:intergenic | 25.0% |
| ! | CATCAATTGTGAATTCATAT+TGG | + | chr6_4:18007275-18007294 | None:intergenic | 25.0% |
| ! | CAATATGAATTCACAATTGA+TGG | - | chr6_4:18007273-18007292 | Msa0980090:CDS | 25.0% |
| ! | AATTGATGGAAGTAACAAAT+TGG | - | chr6_4:18007287-18007306 | Msa0980090:CDS | 25.0% |
| ! | ATAACGGTTTATTCTATATG+TGG | + | chr6_4:18007385-18007404 | None:intergenic | 25.0% |
| !!! | AAAATCTGTCAAACTTGTTT+TGG | + | chr6_4:18007715-18007734 | None:intergenic | 25.0% |
| !!! | TGTTATATTTTTGTGTAGGT+TGG | - | chr6_4:18007801-18007820 | Msa0980090:CDS | 25.0% |
| !! | TGTAAAGAGTTTCAATTTTC+AGG | - | chr6_4:18008101-18008120 | Msa0980090:CDS | 25.0% |
| ! | TCAAGAACATGTAATTGATT+TGG | - | chr6_4:18008391-18008410 | Msa0980090:CDS | 25.0% |
| ! | TTGTTTCAAAAACAAAAGGT+CGG | - | chr6_4:18008459-18008478 | Msa0980090:CDS | 25.0% |
| !! | TCATCAATGTTATTGACTTG+AGG | + | chr6_4:18006637-18006656 | None:intergenic | 30.0% |
| TCAAGTCAATAACATTGATG+AGG | - | chr6_4:18006636-18006655 | Msa0980090:CDS | 30.0% | |
| CAAGTCAATAACATTGATGA+GGG | - | chr6_4:18006637-18006656 | Msa0980090:CDS | 30.0% | |
| AAGTCAATAACATTGATGAG+GGG | - | chr6_4:18006638-18006657 | Msa0980090:CDS | 30.0% | |
| GTAGTTACTAAGAGAAGAAT+TGG | - | chr6_4:18006922-18006941 | Msa0980090:CDS | 30.0% | |
| ! | AATTGGCATTGAGGAAAAAT+GGG | - | chr6_4:18006939-18006958 | Msa0980090:CDS | 30.0% |
| ACAAATTGGAGCATATTGTT+TGG | - | chr6_4:18007301-18007320 | Msa0980090:CDS | 30.0% | |
| CAAATTGGAGCATATTGTTT+GGG | - | chr6_4:18007302-18007321 | Msa0980090:CDS | 30.0% | |
| ! | TCTTTACCCATCGTAAATTT+TGG | - | chr6_4:18007595-18007614 | Msa0980090:CDS | 30.0% |
| ! | CTTTACCCATCGTAAATTTT+GGG | - | chr6_4:18007596-18007615 | Msa0980090:CDS | 30.0% |
| AAAGTCCTTCAAATAAGCTA+AGG | + | chr6_4:18007622-18007641 | None:intergenic | 30.0% | |
| !!! | TTGAAGGACTTTTTTTTTGC+TGG | - | chr6_4:18007630-18007649 | Msa0980090:CDS | 30.0% |
| GTCAAAATTAGAAATCAAGC+TGG | - | chr6_4:18007831-18007850 | Msa0980090:CDS | 30.0% | |
| !! | CGAAAAGGAAGATATTTTGA+TGG | + | chr6_4:18008182-18008201 | None:intergenic | 30.0% |
| ! | CAAAATATCTTCCTTTTCGA+TGG | - | chr6_4:18008183-18008202 | Msa0980090:CDS | 30.0% |
| CATGTAATAAACTGCAATGA+TGG | - | chr6_4:18008239-18008258 | Msa0980090:CDS | 30.0% | |
| ! | GATATTTTCTAACTCTCTTG+TGG | + | chr6_4:18008342-18008361 | None:intergenic | 30.0% |
| ATTACATGTTCTTGAGTTTC+AGG | + | chr6_4:18008386-18008405 | None:intergenic | 30.0% | |
| !! | ACATGTAATTGATTTGGAAG+AGG | - | chr6_4:18008397-18008416 | Msa0980090:CDS | 30.0% |
| !!! | CCTTTTGTTTTTGAAACAAC+AGG | + | chr6_4:18008458-18008477 | None:intergenic | 30.0% |
| !! | CCTGTTGTTTCAAAAACAAA+AGG | - | chr6_4:18008455-18008474 | Msa0980090:CDS | 30.0% |
| !! | TCATCAATGTTATTGACTTG+AGG | + | chr6_4:18006637-18006656 | None:intergenic | 30.0% |
| TCAAGTCAATAACATTGATG+AGG | - | chr6_4:18006636-18006655 | Msa0980090:CDS | 30.0% | |
| CAAGTCAATAACATTGATGA+GGG | - | chr6_4:18006637-18006656 | Msa0980090:CDS | 30.0% | |
| AAGTCAATAACATTGATGAG+GGG | - | chr6_4:18006638-18006657 | Msa0980090:CDS | 30.0% | |
| GTAGTTACTAAGAGAAGAAT+TGG | - | chr6_4:18006922-18006941 | Msa0980090:CDS | 30.0% | |
| ! | AATTGGCATTGAGGAAAAAT+GGG | - | chr6_4:18006939-18006958 | Msa0980090:CDS | 30.0% |
| ACAAATTGGAGCATATTGTT+TGG | - | chr6_4:18007301-18007320 | Msa0980090:CDS | 30.0% | |
| CAAATTGGAGCATATTGTTT+GGG | - | chr6_4:18007302-18007321 | Msa0980090:CDS | 30.0% | |
| ! | TCTTTACCCATCGTAAATTT+TGG | - | chr6_4:18007595-18007614 | Msa0980090:CDS | 30.0% |
| ! | CTTTACCCATCGTAAATTTT+GGG | - | chr6_4:18007596-18007615 | Msa0980090:CDS | 30.0% |
| AAAGTCCTTCAAATAAGCTA+AGG | + | chr6_4:18007622-18007641 | None:intergenic | 30.0% | |
| !!! | TTGAAGGACTTTTTTTTTGC+TGG | - | chr6_4:18007630-18007649 | Msa0980090:CDS | 30.0% |
| GTCAAAATTAGAAATCAAGC+TGG | - | chr6_4:18007831-18007850 | Msa0980090:CDS | 30.0% | |
| !! | CGAAAAGGAAGATATTTTGA+TGG | + | chr6_4:18008182-18008201 | None:intergenic | 30.0% |
| ! | CAAAATATCTTCCTTTTCGA+TGG | - | chr6_4:18008183-18008202 | Msa0980090:CDS | 30.0% |
| CATGTAATAAACTGCAATGA+TGG | - | chr6_4:18008239-18008258 | Msa0980090:CDS | 30.0% | |
| ! | GATATTTTCTAACTCTCTTG+TGG | + | chr6_4:18008342-18008361 | None:intergenic | 30.0% |
| ATTACATGTTCTTGAGTTTC+AGG | + | chr6_4:18008386-18008405 | None:intergenic | 30.0% | |
| !! | ACATGTAATTGATTTGGAAG+AGG | - | chr6_4:18008397-18008416 | Msa0980090:CDS | 30.0% |
| !!! | CCTTTTGTTTTTGAAACAAC+AGG | + | chr6_4:18008458-18008477 | None:intergenic | 30.0% |
| !! | CCTGTTGTTTCAAAAACAAA+AGG | - | chr6_4:18008455-18008474 | Msa0980090:CDS | 30.0% |
| CTGTTGAAGTGGAAAATCAA+AGG | - | chr6_4:18006860-18006879 | Msa0980090:CDS | 35.0% | |
| ATGTGATTGTAGTGCAAAGA+TGG | - | chr6_4:18006900-18006919 | Msa0980090:CDS | 35.0% | |
| TAAGAGAAGAATTGGCATTG+AGG | - | chr6_4:18006930-18006949 | Msa0980090:CDS | 35.0% | |
| ! | GAATTGGCATTGAGGAAAAA+TGG | - | chr6_4:18006938-18006957 | Msa0980090:CDS | 35.0% |
| ATTGGAATGTTACGATAAGC+AGG | + | chr6_4:18007030-18007049 | None:intergenic | 35.0% | |
| ATGCGATCTTGATCAACAAT+TGG | + | chr6_4:18007048-18007067 | None:intergenic | 35.0% | |
| TTAGAGAAAAGAACAGACAC+AGG | - | chr6_4:18007123-18007142 | Msa0980090:CDS | 35.0% | |
| AAGTTTGAAAGATCGAGATG+AGG | - | chr6_4:18007245-18007264 | Msa0980090:CDS | 35.0% | |
| ! | ATTCGTGCATATGAAGCTTT+TGG | - | chr6_4:18007339-18007358 | Msa0980090:CDS | 35.0% |
| CGAAATGAGAAGATTTCTTC+AGG | - | chr6_4:18007477-18007496 | Msa0980090:CDS | 35.0% | |
| ! | CAGATGATTTTGAACGAGAA+TGG | - | chr6_4:18007520-18007539 | Msa0980090:CDS | 35.0% |
| TGAACGAGAATGGAAAGTAA+TGG | - | chr6_4:18007530-18007549 | Msa0980090:CDS | 35.0% | |
| AAAGTAATGGTCTCACAGTT+TGG | - | chr6_4:18007543-18007562 | Msa0980090:CDS | 35.0% | |
| TAAGGCCCAAAATTTACGAT+GGG | + | chr6_4:18007604-18007623 | None:intergenic | 35.0% | |
| GGAAAATGTGTTGTAATCTG+AGG | + | chr6_4:18007891-18007910 | None:intergenic | 35.0% | |
| ! | TGAAGCAACTTAAAGGCATA+AGG | + | chr6_4:18007945-18007964 | None:intergenic | 35.0% |
| CTCATGTTGAAGCAACTTAA+AGG | + | chr6_4:18007952-18007971 | None:intergenic | 35.0% | |
| CAACATCATACCAAAGTTGA+TGG | - | chr6_4:18008029-18008048 | Msa0980090:CDS | 35.0% | |
| TAGAGACTGAAATTTAGCAG+AGG | + | chr6_4:18008267-18008286 | None:intergenic | 35.0% | |
| TCAGTCTCTAATTCGATGTT+TGG | - | chr6_4:18008277-18008296 | Msa0980090:CDS | 35.0% | |
| CTGTTGAAGTGGAAAATCAA+AGG | - | chr6_4:18006860-18006879 | Msa0980090:CDS | 35.0% | |
| ATGTGATTGTAGTGCAAAGA+TGG | - | chr6_4:18006900-18006919 | Msa0980090:CDS | 35.0% | |
| TAAGAGAAGAATTGGCATTG+AGG | - | chr6_4:18006930-18006949 | Msa0980090:CDS | 35.0% | |
| ! | GAATTGGCATTGAGGAAAAA+TGG | - | chr6_4:18006938-18006957 | Msa0980090:CDS | 35.0% |
| ATTGGAATGTTACGATAAGC+AGG | + | chr6_4:18007030-18007049 | None:intergenic | 35.0% | |
| ATGCGATCTTGATCAACAAT+TGG | + | chr6_4:18007048-18007067 | None:intergenic | 35.0% | |
| TTAGAGAAAAGAACAGACAC+AGG | - | chr6_4:18007123-18007142 | Msa0980090:CDS | 35.0% | |
| AAGTTTGAAAGATCGAGATG+AGG | - | chr6_4:18007245-18007264 | Msa0980090:CDS | 35.0% | |
| ! | ATTCGTGCATATGAAGCTTT+TGG | - | chr6_4:18007339-18007358 | Msa0980090:CDS | 35.0% |
| CGAAATGAGAAGATTTCTTC+AGG | - | chr6_4:18007477-18007496 | Msa0980090:CDS | 35.0% | |
| ! | CAGATGATTTTGAACGAGAA+TGG | - | chr6_4:18007520-18007539 | Msa0980090:CDS | 35.0% |
| TGAACGAGAATGGAAAGTAA+TGG | - | chr6_4:18007530-18007549 | Msa0980090:CDS | 35.0% | |
| AAAGTAATGGTCTCACAGTT+TGG | - | chr6_4:18007543-18007562 | Msa0980090:CDS | 35.0% | |
| TAAGGCCCAAAATTTACGAT+GGG | + | chr6_4:18007604-18007623 | None:intergenic | 35.0% | |
| GGAAAATGTGTTGTAATCTG+AGG | + | chr6_4:18007891-18007910 | None:intergenic | 35.0% | |
| ! | TGAAGCAACTTAAAGGCATA+AGG | + | chr6_4:18007945-18007964 | None:intergenic | 35.0% |
| CTCATGTTGAAGCAACTTAA+AGG | + | chr6_4:18007952-18007971 | None:intergenic | 35.0% | |
| CAACATCATACCAAAGTTGA+TGG | - | chr6_4:18008029-18008048 | Msa0980090:CDS | 35.0% | |
| TAGAGACTGAAATTTAGCAG+AGG | + | chr6_4:18008267-18008286 | None:intergenic | 35.0% | |
| TCAGTCTCTAATTCGATGTT+TGG | - | chr6_4:18008277-18008296 | Msa0980090:CDS | 35.0% | |
| ! | ATGAGGGGATTCCTTTTGAA+GGG | - | chr6_4:18006653-18006672 | Msa0980090:CDS | 40.0% |
| TGTGTCTGAAGAGAATCCAT+CGG | - | chr6_4:18006780-18006799 | Msa0980090:CDS | 40.0% | |
| ATCCATCGGGTGTTTATAAG+AGG | - | chr6_4:18006794-18006813 | Msa0980090:CDS | 40.0% | |
| TCCATCGGGTGTTTATAAGA+GGG | - | chr6_4:18006795-18006814 | Msa0980090:CDS | 40.0% | |
| ! | AGGGAATTTGTTTGTCATCG+TGG | - | chr6_4:18006814-18006833 | Msa0980090:CDS | 40.0% |
| ! | GAATTTGTTTGTCATCGTGG+TGG | - | chr6_4:18006817-18006836 | Msa0980090:CDS | 40.0% |
| TTCTCACAACCACGAGTTAT+TGG | - | chr6_4:18006981-18007000 | Msa0980090:CDS | 40.0% | |
| CTTTGTCATCCAATAACTCG+TGG | + | chr6_4:18006993-18007012 | None:intergenic | 40.0% | |
| CGAGTTATTGGATGACAAAG+AGG | - | chr6_4:18006993-18007012 | Msa0980090:CDS | 40.0% | |
| TATAAGACTTACAGGGCAAC+CGG | + | chr6_4:18007088-18007107 | None:intergenic | 40.0% | |
| CTCTCGCTATAAGACTTACA+GGG | + | chr6_4:18007095-18007114 | None:intergenic | 40.0% | |
| ACTCTCGCTATAAGACTTAC+AGG | + | chr6_4:18007096-18007115 | None:intergenic | 40.0% | |
| GAGCATATTGTTTGGGCATT+TGG | - | chr6_4:18007309-18007328 | Msa0980090:CDS | 40.0% | |
| !! | TTCCAAGAGGCATCTCATAA+CGG | + | chr6_4:18007401-18007420 | None:intergenic | 40.0% |
| ATGAGATGCCTCTTGGAATA+TGG | - | chr6_4:18007403-18007422 | Msa0980090:intron | 40.0% | |
| TGAGATGCCTCTTGGAATAT+GGG | - | chr6_4:18007404-18007423 | Msa0980090:intron | 40.0% | |
| !! | TGGGTTGGTGTTGATAATCA+TGG | - | chr6_4:18007423-18007442 | Msa0980090:intron | 40.0% |
| AATGGTCTCACAGTTTGGTT+TGG | - | chr6_4:18007548-18007567 | Msa0980090:CDS | 40.0% | |
| ! | ATGGTCTCACAGTTTGGTTT+GGG | - | chr6_4:18007549-18007568 | Msa0980090:CDS | 40.0% |
| CTAAGGCCCAAAATTTACGA+TGG | + | chr6_4:18007605-18007624 | None:intergenic | 40.0% | |
| TTGGGCCTTAGCTTATTTGA+AGG | - | chr6_4:18007614-18007633 | Msa0980090:CDS | 40.0% | |
| TTTGCTGGAATGACAACAAC+AGG | - | chr6_4:18007645-18007664 | Msa0980090:CDS | 40.0% | |
| TAGAAATCAAGCTGGAGAAG+AGG | - | chr6_4:18007839-18007858 | Msa0980090:CDS | 40.0% | |
| ATAAGGTGTGAGTATAGACG+AGG | + | chr6_4:18007928-18007947 | None:intergenic | 40.0% | |
| TTGCACAACATAAGAGCCAT+TGG | + | chr6_4:18008012-18008031 | None:intergenic | 40.0% | |
| !! | CATCATACCAAAGTTGATGG+TGG | - | chr6_4:18008032-18008051 | Msa0980090:CDS | 40.0% |
| TATACGACCACCATCAACTT+TGG | + | chr6_4:18008042-18008061 | None:intergenic | 40.0% | |
| AAAGACAAGTGAACGAGAAC+AGG | - | chr6_4:18008313-18008332 | Msa0980090:CDS | 40.0% | |
| AAAACAAAAGGTCGGCCAAA+AGG | - | chr6_4:18008467-18008486 | Msa0980090:CDS | 40.0% | |
| !!! | CCTTTTGGTCTTGATCCTTT+TGG | + | chr6_4:18008485-18008504 | None:intergenic | 40.0% |
| CCAAAAGGATCAAGACCAAA+AGG | - | chr6_4:18008482-18008501 | Msa0980090:CDS | 40.0% | |
| AAAGGATCAAGACCAAAAGG+AGG | - | chr6_4:18008485-18008504 | Msa0980090:CDS | 40.0% | |
| AAGGATCAAGACCAAAAGGA+GGG | - | chr6_4:18008486-18008505 | Msa0980090:CDS | 40.0% | |
| ! | ATGAGGGGATTCCTTTTGAA+GGG | - | chr6_4:18006653-18006672 | Msa0980090:CDS | 40.0% |
| TGTGTCTGAAGAGAATCCAT+CGG | - | chr6_4:18006780-18006799 | Msa0980090:CDS | 40.0% | |
| ATCCATCGGGTGTTTATAAG+AGG | - | chr6_4:18006794-18006813 | Msa0980090:CDS | 40.0% | |
| TCCATCGGGTGTTTATAAGA+GGG | - | chr6_4:18006795-18006814 | Msa0980090:CDS | 40.0% | |
| ! | AGGGAATTTGTTTGTCATCG+TGG | - | chr6_4:18006814-18006833 | Msa0980090:CDS | 40.0% |
| ! | GAATTTGTTTGTCATCGTGG+TGG | - | chr6_4:18006817-18006836 | Msa0980090:CDS | 40.0% |
| TTCTCACAACCACGAGTTAT+TGG | - | chr6_4:18006981-18007000 | Msa0980090:CDS | 40.0% | |
| CTTTGTCATCCAATAACTCG+TGG | + | chr6_4:18006993-18007012 | None:intergenic | 40.0% | |
| CGAGTTATTGGATGACAAAG+AGG | - | chr6_4:18006993-18007012 | Msa0980090:CDS | 40.0% | |
| TATAAGACTTACAGGGCAAC+CGG | + | chr6_4:18007088-18007107 | None:intergenic | 40.0% | |
| CTCTCGCTATAAGACTTACA+GGG | + | chr6_4:18007095-18007114 | None:intergenic | 40.0% | |
| ACTCTCGCTATAAGACTTAC+AGG | + | chr6_4:18007096-18007115 | None:intergenic | 40.0% | |
| GAGCATATTGTTTGGGCATT+TGG | - | chr6_4:18007309-18007328 | Msa0980090:CDS | 40.0% | |
| !! | TTCCAAGAGGCATCTCATAA+CGG | + | chr6_4:18007401-18007420 | None:intergenic | 40.0% |
| ATGAGATGCCTCTTGGAATA+TGG | - | chr6_4:18007403-18007422 | Msa0980090:intron | 40.0% | |
| TGAGATGCCTCTTGGAATAT+GGG | - | chr6_4:18007404-18007423 | Msa0980090:intron | 40.0% | |
| !! | TGGGTTGGTGTTGATAATCA+TGG | - | chr6_4:18007423-18007442 | Msa0980090:intron | 40.0% |
| AATGGTCTCACAGTTTGGTT+TGG | - | chr6_4:18007548-18007567 | Msa0980090:CDS | 40.0% | |
| ! | ATGGTCTCACAGTTTGGTTT+GGG | - | chr6_4:18007549-18007568 | Msa0980090:CDS | 40.0% |
| CTAAGGCCCAAAATTTACGA+TGG | + | chr6_4:18007605-18007624 | None:intergenic | 40.0% | |
| TTGGGCCTTAGCTTATTTGA+AGG | - | chr6_4:18007614-18007633 | Msa0980090:CDS | 40.0% | |
| TTTGCTGGAATGACAACAAC+AGG | - | chr6_4:18007645-18007664 | Msa0980090:CDS | 40.0% | |
| TAGAAATCAAGCTGGAGAAG+AGG | - | chr6_4:18007839-18007858 | Msa0980090:CDS | 40.0% | |
| ATAAGGTGTGAGTATAGACG+AGG | + | chr6_4:18007928-18007947 | None:intergenic | 40.0% | |
| TTGCACAACATAAGAGCCAT+TGG | + | chr6_4:18008012-18008031 | None:intergenic | 40.0% | |
| !! | CATCATACCAAAGTTGATGG+TGG | - | chr6_4:18008032-18008051 | Msa0980090:CDS | 40.0% |
| TATACGACCACCATCAACTT+TGG | + | chr6_4:18008042-18008061 | None:intergenic | 40.0% | |
| AAAGACAAGTGAACGAGAAC+AGG | - | chr6_4:18008313-18008332 | Msa0980090:CDS | 40.0% | |
| AAAACAAAAGGTCGGCCAAA+AGG | - | chr6_4:18008467-18008486 | Msa0980090:CDS | 40.0% | |
| !!! | CCTTTTGGTCTTGATCCTTT+TGG | + | chr6_4:18008485-18008504 | None:intergenic | 40.0% |
| CCAAAAGGATCAAGACCAAA+AGG | - | chr6_4:18008482-18008501 | Msa0980090:CDS | 40.0% | |
| AAAGGATCAAGACCAAAAGG+AGG | - | chr6_4:18008485-18008504 | Msa0980090:CDS | 40.0% | |
| AAGGATCAAGACCAAAAGGA+GGG | - | chr6_4:18008486-18008505 | Msa0980090:CDS | 40.0% | |
| ! | GATGAGGGGATTCCTTTTGA+AGG | - | chr6_4:18006652-18006671 | Msa0980090:CDS | 45.0% |
| GTGTCTGAAGAGAATCCATC+GGG | - | chr6_4:18006781-18006800 | Msa0980090:CDS | 45.0% | |
| TCCCTCTTATAAACACCCGA+TGG | + | chr6_4:18006799-18006818 | None:intergenic | 45.0% | |
| GTTTGTCATCGTGGTGGTAT+TGG | - | chr6_4:18006823-18006842 | Msa0980090:CDS | 45.0% | |
| ACCACGCAAAACTGTTGAAG+TGG | - | chr6_4:18006849-18006868 | Msa0980090:CDS | 45.0% | |
| ! | TCCACTTCAACAGTTTTGCG+TGG | + | chr6_4:18006853-18006872 | None:intergenic | 45.0% |
| ! | TGGCATTGAGGAAAAATGGG+TGG | - | chr6_4:18006942-18006961 | Msa0980090:CDS | 45.0% |
| AACCGTTATGAGATGCCTCT+TGG | - | chr6_4:18007396-18007415 | Msa0980090:intron | 45.0% | |
| ATGCCTCTTGGAATATGGGT+TGG | - | chr6_4:18007408-18007427 | Msa0980090:intron | 45.0% | |
| ACACCAACCCATATTCCAAG+AGG | + | chr6_4:18007414-18007433 | None:intergenic | 45.0% | |
| GACGAGGCATGTTCTTCAAT+AGG | + | chr6_4:18007912-18007931 | None:intergenic | 45.0% | |
| CTTTCTCGTCTCCATCGAAA+AGG | + | chr6_4:18008197-18008216 | None:intergenic | 45.0% | |
| AACGTCACAGTCAGCATTGT+TGG | + | chr6_4:18008429-18008448 | None:intergenic | 45.0% | |
| AGGATCAAGACCAAAAGGAG+GGG | - | chr6_4:18008487-18008506 | Msa0980090:CDS | 45.0% | |
| ! | GATGAGGGGATTCCTTTTGA+AGG | - | chr6_4:18006652-18006671 | Msa0980090:CDS | 45.0% |
| GTGTCTGAAGAGAATCCATC+GGG | - | chr6_4:18006781-18006800 | Msa0980090:CDS | 45.0% | |
| TCCCTCTTATAAACACCCGA+TGG | + | chr6_4:18006799-18006818 | None:intergenic | 45.0% | |
| GTTTGTCATCGTGGTGGTAT+TGG | - | chr6_4:18006823-18006842 | Msa0980090:CDS | 45.0% | |
| ACCACGCAAAACTGTTGAAG+TGG | - | chr6_4:18006849-18006868 | Msa0980090:CDS | 45.0% | |
| ! | TCCACTTCAACAGTTTTGCG+TGG | + | chr6_4:18006853-18006872 | None:intergenic | 45.0% |
| ! | TGGCATTGAGGAAAAATGGG+TGG | - | chr6_4:18006942-18006961 | Msa0980090:CDS | 45.0% |
| AACCGTTATGAGATGCCTCT+TGG | - | chr6_4:18007396-18007415 | Msa0980090:intron | 45.0% | |
| ATGCCTCTTGGAATATGGGT+TGG | - | chr6_4:18007408-18007427 | Msa0980090:intron | 45.0% | |
| ACACCAACCCATATTCCAAG+AGG | + | chr6_4:18007414-18007433 | None:intergenic | 45.0% | |
| GACGAGGCATGTTCTTCAAT+AGG | + | chr6_4:18007912-18007931 | None:intergenic | 45.0% | |
| CTTTCTCGTCTCCATCGAAA+AGG | + | chr6_4:18008197-18008216 | None:intergenic | 45.0% | |
| AACGTCACAGTCAGCATTGT+TGG | + | chr6_4:18008429-18008448 | None:intergenic | 45.0% | |
| AGGATCAAGACCAAAAGGAG+GGG | - | chr6_4:18008487-18008506 | Msa0980090:CDS | 45.0% | |
| !! | CTCACAGTTTGGTTTGGGTG+TGG | - | chr6_4:18007554-18007573 | Msa0980090:CDS | 50.0% |
| GCAGCAATTGAAGCTGCCAA+TGG | - | chr6_4:18007993-18008012 | Msa0980090:CDS | 50.0% | |
| ATGACAACGACGAGGCTTCT+TGG | + | chr6_4:18008522-18008541 | None:intergenic | 50.0% | |
| ! | TCTGGAACATGACAACGACG+AGG | + | chr6_4:18008530-18008549 | None:intergenic | 50.0% |
| !! | CTCACAGTTTGGTTTGGGTG+TGG | - | chr6_4:18007554-18007573 | Msa0980090:CDS | 50.0% |
| GCAGCAATTGAAGCTGCCAA+TGG | - | chr6_4:18007993-18008012 | Msa0980090:CDS | 50.0% | |
| ATGACAACGACGAGGCTTCT+TGG | + | chr6_4:18008522-18008541 | None:intergenic | 50.0% | |
| ! | TCTGGAACATGACAACGACG+AGG | + | chr6_4:18008530-18008549 | None:intergenic | 50.0% |
| ! | GCAGCTTCAACCCCTCCTTT+TGG | + | chr6_4:18008500-18008519 | None:intergenic | 55.0% |
| ! | GCAGCTTCAACCCCTCCTTT+TGG | + | chr6_4:18008500-18008519 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 18006631 | 18008553 | 18006631 | ID=Msa0980090;Name=Msa0980090 |
| chr6_4 | mRNA | 18006631 | 18008553 | 18006631 | ID=Msa0980090-mRNA-1;Parent=Msa0980090;Name=Msa0980090-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0|1|1|1|2|0|616 |
| chr6_4 | exon | 18007441 | 18008553 | 18007441 | ID=Msa0980090-mRNA-1:exon:5568;Parent=Msa0980090-mRNA-1 |
| chr6_4 | exon | 18006631 | 18007365 | 18006631 | ID=Msa0980090-mRNA-1:exon:5567;Parent=Msa0980090-mRNA-1 |
| chr6_4 | CDS | 18007441 | 18008553 | 18007441 | ID=Msa0980090-mRNA-1:cds;Parent=Msa0980090-mRNA-1 |
| chr6_4 | CDS | 18006631 | 18007365 | 18006631 | ID=Msa0980090-mRNA-1:cds;Parent=Msa0980090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
