AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0135380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0135380 MtrunA17_Chr1g0205821 93.064 173 12 0 77 249 1 173 2.69e-113 322
Msa0135380 MtrunA17_Chr1g0205821 53.933 89 41 0 79 167 89 177 1.34e-23 94.0
Msa0135380 MtrunA17_Chr1g0205821 55.294 85 38 0 167 251 5 89 1.33e-22 91.3
Msa0135380 MtrunA17_Chr1g0205831 69.182 159 34 1 93 251 6 149 8.69e-72 217
Msa0135380 MtrunA17_Chr1g0205831 56.579 76 33 0 93 168 77 152 3.88e-20 84.7
Msa0135380 MtrunA17_Chr1g0205831 57.143 70 30 0 175 244 2 71 1.13e-19 83.6
Msa0135380 MtrunA17_Chr4g0075861 48.428 159 79 1 89 247 89 244 1.82e-40 143
Msa0135380 MtrunA17_Chr4g0075861 42.857 175 90 3 77 251 1 165 1.51e-30 116
Msa0135380 MtrunA17_Chr4g0075971 48.750 160 77 3 89 247 89 244 7.70e-38 139
Msa0135380 MtrunA17_Chr4g0075971 42.614 176 89 5 77 251 1 165 6.48e-28 111
Msa0135380 MtrunA17_Chr3g0077881 49.664 149 69 4 103 246 23 170 1.79e-35 124
Msa0135380 MtrunA17_Chr3g0077881 43.421 76 42 1 176 250 9 84 9.66e-12 62.0
Msa0135380 MtrunA17_Chr3g0077891 48.026 152 74 3 103 249 23 174 3.14e-35 124
Msa0135380 MtrunA17_Chr3g0077911 47.651 149 76 2 97 244 13 160 2.25e-34 121
Msa0135380 MtrunA17_Chr3g0077911 47.297 74 36 1 176 249 9 79 9.62e-15 69.7
Msa0135380 MtrunA17_Chr3g0077941 48.026 152 73 3 103 249 23 173 8.47e-34 120
Msa0135380 MtrunA17_Chr1g0206771 39.759 166 93 1 78 243 5 163 1.72e-33 119
Msa0135380 MtrunA17_Chr1g0206771 43.243 74 42 0 174 247 15 88 8.82e-15 70.5
Msa0135380 MtrunA17_Chr1g0205801 63.441 93 34 0 82 174 5 97 3.41e-32 114
Msa0135380 MtrunA17_Chr1g0205801 57.895 76 32 0 176 251 13 88 1.78e-23 91.7
Msa0135380 MtrunA17_Chr3g0077861 46.259 147 77 2 99 244 15 160 7.88e-32 115
Msa0135380 MtrunA17_Chr3g0077861 41.892 74 40 1 176 249 9 79 4.52e-11 60.1
Msa0135380 MtrunA17_Chr5g0415031 35.870 184 117 1 57 239 10 193 4.55e-31 121
Msa0135380 MtrunA17_Chr5g0415031 50.000 76 37 1 176 251 44 118 1.68e-17 81.6
Msa0135380 MtrunA17_Chr1g0205811 65.000 80 28 0 89 168 14 93 3.38e-29 106
Msa0135380 MtrunA17_Chr1g0205811 55.696 79 35 0 173 251 12 90 5.33e-25 95.9
Msa0135380 MtrunA17_Chr1g0205811 93.750 32 2 0 7 38 1 32 1.99e-12 62.4
Msa0135380 MtrunA17_Chr8g0364231 38.816 152 93 0 87 238 40 191 1.23e-25 105
Msa0135380 MtrunA17_Chr8g0364231 51.316 76 36 1 176 251 43 117 4.09e-18 83.6
Msa0135380 MtrunA17_Chr6g0452021 37.086 151 93 2 89 239 43 191 9.55e-24 99.4
Msa0135380 MtrunA17_Chr6g0452021 44.444 72 40 0 176 247 44 115 2.06e-14 72.4
Msa0135380 MtrunA17_Chr7g0218891 33.526 173 109 3 77 245 1 171 9.89e-24 96.7
Msa0135380 MtrunA17_Chr7g0218891 35.119 168 99 4 89 250 99 262 3.67e-23 95.1
Msa0135380 MtrunA17_Chr6g0452001 35.948 153 98 0 87 239 61 213 6.41e-23 97.4
Msa0135380 MtrunA17_Chr6g0452001 44.000 75 42 0 176 250 64 138 1.80e-14 72.8
Msa0135380 MtrunA17_Chr1g0206781 48.684 76 39 0 176 251 12 87 2.00e-19 81.3
Msa0135380 MtrunA17_Chr1g0206781 37.190 121 50 1 90 210 12 106 8.89e-17 74.3
Msa0135380 MtrunA17_Chr1g0209201 38.806 134 68 4 79 212 10 129 2.30e-17 76.3
Msa0135380 MtrunA17_Chr1g0209201 44.615 65 35 1 178 242 19 82 2.39e-11 60.1
Msa0135380 MtrunA17_Chr1g0205861 51.429 70 34 0 174 243 15 84 1.36e-16 73.6
Msa0135380 MtrunA17_Chr1g0205861 49.231 65 33 0 87 151 14 78 2.58e-12 62.0
Msa0135380 MtrunA17_Chr2g0328701 41.525 118 59 3 77 194 18 125 8.09e-16 71.6
Msa0135380 MtrunA17_Chr2g0328701 42.500 80 43 1 171 250 25 101 3.15e-12 62.0
Msa0135380 MtrunA17_Chr8g0364021 37.736 106 62 2 57 158 8 113 9.07e-14 68.9
Msa0135380 MtrunA17_Chr8g0364021 45.833 72 39 0 173 244 42 113 1.08e-13 68.6
Msa0135380 MtrunA17_Chr3g0077811 55.172 58 26 0 103 160 28 85 3.82e-13 64.3
Msa0135380 MtrunA17_Chr7g0256011 40.541 74 43 1 166 239 8 80 2.28e-12 62.4
Msa0135380 MtrunA17_Chr7g0256011 41.250 80 47 0 74 153 1 80 1.21e-11 60.5
Msa0135380 MtrunA17_Chr7g0218911 44.776 67 37 0 179 245 2 68 1.86e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0135380 AT5G15020.2 37.662 154 92 2 87 239 50 200 1.92e-24 102
Msa0135380 AT5G15020.2 42.105 76 44 0 169 244 46 121 1.90e-13 70.1
Msa0135380 AT5G15020.1 37.662 154 92 2 87 239 50 200 2.00e-24 102
Msa0135380 AT5G15020.1 42.105 76 44 0 169 244 46 121 1.87e-13 70.1
Msa0135380 AT3G01320.2 34.973 183 112 3 65 245 31 208 2.22e-23 99.4
Msa0135380 AT3G01320.1 34.973 183 112 3 65 245 31 208 2.47e-23 99.4
Msa0135380 AT1G24230.1 33.537 164 93 3 87 249 12 160 6.92e-23 94.0
Msa0135380 AT1G70060.2 37.908 153 94 1 87 238 12 164 1.12e-22 97.4
Msa0135380 AT1G70060.2 45.333 75 41 0 176 250 15 89 2.73e-14 72.8
Msa0135380 AT1G70060.1 37.908 153 94 1 87 238 12 164 1.12e-22 97.4
Msa0135380 AT1G70060.1 45.333 75 41 0 176 250 15 89 2.73e-14 72.8
Msa0135380 AT1G24190.3 36.184 152 97 0 87 238 12 163 2.32e-22 96.3
Msa0135380 AT1G24190.3 45.946 74 39 1 176 248 15 88 2.49e-14 72.8
Msa0135380 AT1G24190.2 36.184 152 97 0 87 238 12 163 2.41e-22 96.3
Msa0135380 AT1G24190.2 45.946 74 39 1 176 248 15 88 2.61e-14 72.8
Msa0135380 AT1G24190.1 36.184 152 97 0 87 238 12 163 2.55e-22 96.3
Msa0135380 AT1G24190.1 45.946 74 39 1 176 248 15 88 2.63e-14 72.8
Msa0135380 AT1G27260.1 36.774 155 92 3 87 236 1 154 4.66e-22 91.3
Msa0135380 AT1G27260.1 42.667 75 43 0 174 248 2 76 1.17e-11 63.2
Msa0135380 AT1G24200.1 35.443 158 89 2 85 237 10 159 1.23e-21 89.7
Msa0135380 AT1G24200.1 45.588 68 37 0 176 243 15 82 8.72e-14 68.6
Msa0135380 AT1G10450.3 35.948 153 96 2 85 237 80 230 3.21e-21 93.2
Msa0135380 AT1G10450.3 47.826 69 36 0 176 244 85 153 1.63e-13 70.5
Msa0135380 AT1G10450.2 35.948 153 96 2 85 237 29 179 3.44e-21 92.8
Msa0135380 AT1G10450.2 47.826 69 36 0 176 244 34 102 1.46e-13 70.5
Msa0135380 AT1G10450.1 35.948 153 96 2 85 237 29 179 3.44e-21 92.8
Msa0135380 AT1G10450.1 47.826 69 36 0 176 244 34 102 1.46e-13 70.5
Msa0135380 AT1G24250.1 30.994 171 96 3 87 236 12 181 7.43e-21 89.0
Msa0135380 AT1G70030.1 36.242 149 93 2 89 237 11 157 2.47e-19 82.4
Msa0135380 AT1G23810.1 29.586 169 108 3 78 236 3 170 3.06e-19 84.3
Msa0135380 AT1G59890.2 34.641 153 92 2 89 238 45 192 1.65e-18 85.1
Msa0135380 AT1G59890.2 46.377 69 37 0 176 244 46 114 1.39e-13 70.5
Msa0135380 AT1G59890.4 34.641 153 92 2 89 238 45 192 1.71e-18 85.1
Msa0135380 AT1G59890.4 46.377 69 37 0 176 244 46 114 1.43e-13 70.5
Msa0135380 AT1G59890.1 34.641 153 92 2 89 238 45 192 1.81e-18 85.1
Msa0135380 AT1G59890.1 46.377 69 37 0 176 244 46 114 1.43e-13 70.5
Msa0135380 AT1G59890.3 34.641 153 92 2 89 238 45 192 1.83e-18 85.1
Msa0135380 AT1G59890.3 46.377 69 37 0 176 244 46 114 1.47e-13 70.5
Msa0135380 AT1G27280.1 33.566 143 93 1 97 237 1 143 4.41e-16 75.1
Msa0135380 AT1G27220.1 45.070 71 39 0 87 157 12 82 3.30e-15 72.0
Msa0135380 AT1G27220.1 36.986 73 46 0 171 243 10 82 6.87e-11 60.1
Msa0135380 AT5G15040.1 46.269 67 36 0 178 244 6 72 6.60e-14 65.9
Msa0135380 AT5G15040.1 42.857 77 42 1 89 165 3 77 6.23e-13 63.2
Msa0135380 AT5G15040.3 46.269 67 36 0 178 244 6 72 6.60e-14 65.9
Msa0135380 AT5G15040.3 42.857 77 42 1 89 165 3 77 6.23e-13 63.2
Msa0135380 AT5G15040.2 46.269 67 36 0 178 244 6 72 6.60e-14 65.9
Msa0135380 AT5G15040.2 42.857 77 42 1 89 165 3 77 6.23e-13 63.2
Msa0135380 AT1G27250.1 39.560 91 52 1 66 156 1 88 2.11e-13 65.9
Msa0135380 AT5G15025.1 40.449 89 53 0 75 163 33 121 7.14e-13 64.3
Msa0135380 AT5G15025.1 40.845 71 42 0 174 244 46 116 3.08e-12 62.4
Msa0135380 AT1G70030.2 38.261 115 65 2 89 198 22 135 1.50e-12 63.5
Msa0135380 AT1G27270.1 32.716 162 96 2 88 236 13 174 3.18e-12 64.7
Msa0135380 AT1G24210.1 43.243 74 40 1 81 152 4 77 3.20e-12 63.2
Msa0135380 AT1G70030.3 40.206 97 57 1 89 185 22 117 3.54e-12 62.4
Msa0135380 AT1G70030.3 43.056 72 41 0 176 247 23 94 4.43e-11 59.3

Find 47 sgRNAs with CRISPR-Local

Find 939 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGAAACTCCTACAAGATTT+TGG 0.194654 1_3:+67024894 Msa0135380:CDS
GCTGATGAATTGGAGTTTAA+AGG 0.213179 1_3:+67009201 None:intergenic
AACTCTTACATCAATTCTTT+TGG 0.285232 1_3:-67025177 None:intergenic
TGCTTCAGCTTCACCAATCT+TGG 0.305827 1_3:-67012426 None:intergenic
GACTCTTCTATCAATTCTTT+TGG 0.310378 1_3:-67024919 None:intergenic
GCAACAATAAGCTGATGAAT+TGG 0.369113 1_3:+67009191 None:intergenic
GGTTACATTTGAAGATAAGA+TGG 0.406022 1_3:+67025112 Msa0135380:CDS
CTCCATTGCATCACCAATCA+AGG 0.409244 1_3:-67022285 None:intergenic
ACCAATCTTGGCATTTACTC+TGG 0.415002 1_3:-67012414 None:intergenic
GGATTCATTTCCAGAGTTAT+CGG 0.427892 1_3:+67017597 Msa0135380:intron
TGATGCAATGGAGTTTATAA+AGG 0.447186 1_3:+67022295 Msa0135380:CDS
AAGCTGTGTTTCAAGATAAG+AGG 0.447897 1_3:+67024853 Msa0135380:CDS
CACCCTTGCATCGTCAATCA+AGG 0.459246 1_3:-67024814 None:intergenic
ATGAACAGCTCAAGAAGAAC+AGG 0.465556 1_3:+67024789 Msa0135380:CDS
AGTCGTCAAAGAAGGAGTTA+TGG 0.477577 1_3:+67024938 Msa0135380:CDS
AGTTGTCAAAGAAGGAATGA+TGG 0.479247 1_3:+67025196 Msa0135380:CDS
AGAAGAACAAAACCCTTGAT+TGG 0.483812 1_3:+67022272 Msa0135380:CDS
ACATGAAATCCCACTTCCAT+TGG 0.486277 1_3:+67025019 Msa0135380:CDS
TCCAGAGTAAATGCCAAGAT+TGG 0.492118 1_3:+67012413 Msa0135380:CDS
AGAGTTATCGGAGAAGGTAA+TGG 0.508348 1_3:+67017609 Msa0135380:intron
GATAGAAGAGTCGTCAAAGA+AGG 0.515587 1_3:+67024930 Msa0135380:CDS
AAATCATCATCCAATGGAAG+TGG 0.515740 1_3:-67025029 None:intergenic
TTCAACATCTTCTTGCCACC+AGG 0.516818 1_3:+67024996 Msa0135380:CDS
ACACAAAATCTCACTTCCAT+TGG 0.521284 1_3:+67025277 Msa0135380:CDS
ATTTCCAGAGTTATCGGAGA+AGG 0.528804 1_3:+67017603 Msa0135380:intron
GTCCCTTGATTGACGATGCA+AGG 0.537025 1_3:+67024811 Msa0135380:CDS
AGCTGTGTTTCAAGATAAGA+GGG 0.537554 1_3:+67024854 Msa0135380:CDS
GATGTAAGAGTTGTCAAAGA+AGG 0.540360 1_3:+67025188 Msa0135380:CDS
CGATGCAAGGGTGTTTGTAA+AGG 0.542038 1_3:+67024824 Msa0135380:CDS
TTTGTGTCCCTCTGGCAAGA+AGG 0.563533 1_3:-67025261 None:intergenic
ACCCTTGATTGGTGATGCAA+TGG 0.572570 1_3:+67022283 Msa0135380:CDS
TATTGTTCATCACCATCCAA+TGG 0.573399 1_3:-67025293 None:intergenic
AAGGGCAGTGGCGTTTGTAG+TGG 0.575633 1_3:+67017632 Msa0135380:CDS
GGAAGTGGGATTTCATGTCC+TGG 0.588837 1_3:-67025014 None:intergenic
TTCAACACCTTCTTGCCAGA+GGG 0.592249 1_3:+67025254 Msa0135380:CDS
AGAAGGTAATGGAAGGGCAG+TGG 0.592496 1_3:+67017620 Msa0135380:CDS
AAAATCTCACTTCCATTGGA+TGG 0.592611 1_3:+67025281 Msa0135380:CDS
TCCATTGCATCACCAATCAA+GGG 0.592756 1_3:-67022284 None:intergenic
TCCCTTGATTGACGATGCAA+GGG 0.593982 1_3:+67024812 Msa0135380:CDS
TGTTGTAAATCATCATCCAA+TGG 0.600709 1_3:-67025035 None:intergenic
TTATCGGAGAAGGTAATGGA+AGG 0.610147 1_3:+67017613 Msa0135380:CDS
AATCATCATCCAATGGAAGT+GGG 0.616288 1_3:-67025028 None:intergenic
ACCCTTGCATCGTCAATCAA+GGG 0.616892 1_3:-67024813 None:intergenic
ATTCAACACCTTCTTGCCAG+AGG 0.655191 1_3:+67025253 Msa0135380:CDS
AGCGCTCGAAGATCGAGCAA+TGG 0.658283 1_3:+67025070 Msa0135380:CDS
TATCGGAGAAGGTAATGGAA+GGG 0.683484 1_3:+67017614 Msa0135380:CDS
AGTGGGATTTCATGTCCTGG+TGG 0.734772 1_3:-67025011 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATATTTTATTTATTTT+TGG + chr1_3:67013906-67013925 Msa0135380:intron 0.0%
!!! ATTTTTAATTTTTTTTAATA+GGG - chr1_3:67016617-67016636 None:intergenic 0.0%
!!! AATTTTTAATTTTTTTTAAT+AGG - chr1_3:67016616-67016635 None:intergenic 0.0%
!!! AATTTTTAATTTTTTTTAAT+AGG + chr1_3:67016616-67016635 Msa0135380:intron 0.0%
!!! ATTTTTAATTTTTTTTAATA+GGG + chr1_3:67016617-67016636 Msa0135380:intron 0.0%
!!! AAAATATTTAAAATAAAAAT+AGG - chr1_3:67021127-67021146 None:intergenic 0.0%
!!! ATTATAATTTTTTTTTTTTT+TGG + chr1_3:67023987-67024006 Msa0135380:intron 0.0%
!!! TTTTTTGTATTTCAAATTAA+TGG + chr1_3:67010050-67010069 Msa0135380:intron 10.0%
!!! TTAAAATAAAGTTTTTCATT+GGG + chr1_3:67010824-67010843 Msa0135380:intron 10.0%
!! ATTAAAAATATCATTCAAAT+AGG - chr1_3:67010903-67010922 None:intergenic 10.0%
!!! TATTCCTTTTTTTTTTTTTT+GGG + chr1_3:67011000-67011019 Msa0135380:intron 10.0%
!!! TCTTATTTAACAATATATAA+AGG - chr1_3:67011041-67011060 None:intergenic 10.0%
!! AGAAAAAATTACATAAAAAT+TGG + chr1_3:67011349-67011368 Msa0135380:intron 10.0%
!! GAAAAAATTACATAAAAATT+GGG + chr1_3:67011350-67011369 Msa0135380:intron 10.0%
!! AAAAAATTACATAAAAATTG+GGG + chr1_3:67011351-67011370 Msa0135380:intron 10.0%
!!! TTAATTCTAAAACTAATTAA+AGG + chr1_3:67011472-67011491 Msa0135380:intron 10.0%
!! ATTATATAAATATGTATATG+CGG - chr1_3:67013883-67013902 None:intergenic 10.0%
!!! TGTTTTTATTTTAATTTTTG+AGG + chr1_3:67014094-67014113 Msa0135380:intron 10.0%
!! ATAATCTGAAAAAAAATAAT+TGG - chr1_3:67015157-67015176 None:intergenic 10.0%
!!! TTTTAATTTTTTTTAATAGG+GGG - chr1_3:67016619-67016638 None:intergenic 10.0%
!!! TTTTAATTTTTTTTAATAGG+GGG + chr1_3:67016619-67016638 Msa0135380:intron 10.0%
!!! TTTTTACTTTTAAATCAATA+TGG - chr1_3:67018836-67018855 None:intergenic 10.0%
!!! GTTTTATTTATTTATTTTGA+GGG + chr1_3:67018869-67018888 Msa0135380:intron 10.0%
!! AAAAAGGTAATAAAATTAAA+TGG - chr1_3:67019750-67019769 None:intergenic 10.0%
!! GGAAAATATATAAAAAAAAT+TGG - chr1_3:67020023-67020042 None:intergenic 10.0%
!!! AGAGATTTTTTATTTTTAAA+CGG + chr1_3:67020278-67020297 Msa0135380:intron 10.0%
!! ATATATATATCAATTATTAC+TGG + chr1_3:67021743-67021762 Msa0135380:intron 10.0%
!! TATTTGACAAAATATTATAT+TGG - chr1_3:67021919-67021938 None:intergenic 10.0%
!! TGAAATACAAAAAATTGTAA+AGG - chr1_3:67010044-67010063 None:intergenic 15.0%
!!! TTGTAATATTTAAGTTTTGA+AGG + chr1_3:67010457-67010476 Msa0135380:intron 15.0%
!! GTAAAAAATAATTAAGTGAA+TGG + chr1_3:67010749-67010768 Msa0135380:intron 15.0%
!!! GTTAAAATAAAGTTTTTCAT+TGG + chr1_3:67010823-67010842 Msa0135380:intron 15.0%
!! TGATAAAATAGTTGAAATAA+AGG + chr1_3:67010940-67010959 Msa0135380:intron 15.0%
!! GATAAAATAGTTGAAATAAA+GGG + chr1_3:67010941-67010960 Msa0135380:intron 15.0%
!!! GTATTCCTTTTTTTTTTTTT+TGG + chr1_3:67010999-67011018 Msa0135380:intron 15.0%
!!! TAATATATTTTTTAACGCAA+GGG + chr1_3:67011173-67011192 Msa0135380:intron 15.0%
!! AATGCATAATAATATATGTA+AGG - chr1_3:67011243-67011262 None:intergenic 15.0%
!! AAAAATTACATAAAAATTGG+GGG + chr1_3:67011352-67011371 Msa0135380:intron 15.0%
!!! AGAAATTAAGTTTTTTTTAG+AGG - chr1_3:67011609-67011628 None:intergenic 15.0%
!! ATTCATAAATAAAACATTGT+GGG - chr1_3:67011837-67011856 None:intergenic 15.0%
!! ATTTATTTATTTATGTAACG+TGG - chr1_3:67011884-67011903 None:intergenic 15.0%
!!! TTTAAATTTTTCCATTTTGT+AGG - chr1_3:67012079-67012098 None:intergenic 15.0%
!!! AATAGTTAGTTATAATTTGT+TGG + chr1_3:67012216-67012235 Msa0135380:intron 15.0%
!!! ATTTATACCTTTTGAATTTT+TGG + chr1_3:67012318-67012337 Msa0135380:intron 15.0%
!! TTGAATATTTGATTGAATTA+CGG + chr1_3:67013272-67013291 Msa0135380:intron 15.0%
!! TTATATAAATATGTATATGC+GGG - chr1_3:67013882-67013901 None:intergenic 15.0%
!!! TTAATTTTTGAGGAATATTT+TGG + chr1_3:67014104-67014123 Msa0135380:intron 15.0%
!!! ATTTTGGATGTTTTTTTATT+TGG + chr1_3:67014120-67014139 Msa0135380:intron 15.0%
!!! AGTTGCTTTAAAAAAAAAAT+TGG + chr1_3:67014172-67014191 Msa0135380:intron 15.0%
!!! CAAACAAACAAATATTTTTT+TGG + chr1_3:67014496-67014515 Msa0135380:intron 15.0%
!! TAATTTAGAAAATGATTATC+TGG - chr1_3:67015473-67015492 None:intergenic 15.0%
!! TAGTAGATTAGTAAAAAAAA+AGG - chr1_3:67016693-67016712 None:intergenic 15.0%
!!! TTACATATTTTTTTACTGAA+GGG + chr1_3:67017093-67017112 Msa0135380:intron 15.0%
!!! ATAAAAAATGACAAGTTTTT+TGG + chr1_3:67017971-67017990 Msa0135380:intron 15.0%
!!! TTTTTTTTTAAATAGCCTTT+AGG + chr1_3:67018536-67018555 Msa0135380:intron 15.0%
!! AAAGTAAAAATAAAAGTGAA+AGG + chr1_3:67018846-67018865 Msa0135380:intron 15.0%
!! AAGTAAAAATAAAAGTGAAA+GGG + chr1_3:67018847-67018866 Msa0135380:intron 15.0%
!!! GGTTTTATTTATTTATTTTG+AGG + chr1_3:67018868-67018887 Msa0135380:intron 15.0%
!!! TTTTTTGACAAAAAAATGAA+AGG + chr1_3:67018915-67018934 Msa0135380:intron 15.0%
!!! CAATTATTTTTCTTTCTATT+TGG + chr1_3:67019143-67019162 Msa0135380:intron 15.0%
!!! CATTTTGGTAAATTAATTAT+TGG + chr1_3:67019227-67019246 Msa0135380:intron 15.0%
!! ATAATTAAAAAAATTGGTCA+GGG - chr1_3:67019294-67019313 None:intergenic 15.0%
!! AATAATTAAAAAAATTGGTC+AGG - chr1_3:67019295-67019314 None:intergenic 15.0%
!! TACTTAATTGATATTGTATT+CGG - chr1_3:67019493-67019512 None:intergenic 15.0%
!!! ATTTTATTACCTTTTTTCAA+AGG + chr1_3:67019754-67019773 Msa0135380:intron 15.0%
!!! AATAAAATTCCTTTGAAAAA+AGG - chr1_3:67019766-67019785 None:intergenic 15.0%
!! ATATATAAAAAAAATTGGTG+AGG - chr1_3:67020018-67020037 None:intergenic 15.0%
!! ATAAAAATAGGTTATTATTG+AGG - chr1_3:67021115-67021134 None:intergenic 15.0%
!! ACAAAATTAAATCTTCAAAA+TGG - chr1_3:67021823-67021842 None:intergenic 15.0%
!! GTACTCTAAATATTATATTA+TGG + chr1_3:67021859-67021878 Msa0135380:intron 15.0%
!!! AACTCTTTTATTAATTCTTT+TGG - chr1_3:67022393-67022412 None:intergenic 15.0%
!! TAATTATATATTGTGCAATT+TGG + chr1_3:67023343-67023362 Msa0135380:intron 15.0%
!! AGTAATAAAGAAATAGATTT+AGG - chr1_3:67023855-67023874 None:intergenic 15.0%
!! CTTTATTACTATTATAGTAT+AGG + chr1_3:67023865-67023884 Msa0135380:intron 15.0%
!!! CTTTTATCAATATGTTATAA+CGG + chr1_3:67024060-67024079 Msa0135380:intron 15.0%
!!! TATAAAATGACAGCTTTTTT+TGG + chr1_3:67009270-67009289 Msa0135380:intron 20.0%
!! AATTGTAAAGGAGAAATAAA+GGG - chr1_3:67010032-67010051 None:intergenic 20.0%
!! AAATTGTAAAGGAGAAATAA+AGG - chr1_3:67010033-67010052 None:intergenic 20.0%
!!! AACTTTTATCGAAAGAAAAA+CGG - chr1_3:67010133-67010152 None:intergenic 20.0%
!!! TGTTAACAGTTTAATTTGAT+GGG + chr1_3:67010301-67010320 Msa0135380:intron 20.0%
!! AATTAAGTGAATGGTAAAAT+TGG + chr1_3:67010758-67010777 Msa0135380:intron 20.0%
!!! ACCACAATATTTTTCATATA+AGG + chr1_3:67010801-67010820 Msa0135380:intron 20.0%
!! ACCTTATATGAAAAATATTG+TGG - chr1_3:67010805-67010824 None:intergenic 20.0%
!! CACAATAATATGAACAATAT+TGG - chr1_3:67010851-67010870 None:intergenic 20.0%
!! CAATATTGTTCATATTATTG+TGG + chr1_3:67010849-67010868 Msa0135380:intron 20.0%
!! TCTACCCAAAAAAAAAAAAA+AGG - chr1_3:67011007-67011026 None:intergenic 20.0%
!! CTTCGAAAAAATAGTTTAAT+TGG - chr1_3:67011080-67011099 None:intergenic 20.0%
!! CTTTCAAGAAAAGAAATAAT+AGG - chr1_3:67011143-67011162 None:intergenic 20.0%
!! TGCGTTAAAAAATATATTAG+TGG - chr1_3:67011172-67011191 None:intergenic 20.0%
!!! CTAATATATTTTTTAACGCA+AGG + chr1_3:67011172-67011191 Msa0135380:intron 20.0%
!! AAATGACATAAAAAAAAGAG+TGG + chr1_3:67011198-67011217 Msa0135380:intron 20.0%
!! TAATAATATATGTAAGGTCT+GGG - chr1_3:67011237-67011256 None:intergenic 20.0%
!! ATAATAATATATGTAAGGTC+TGG - chr1_3:67011238-67011257 None:intergenic 20.0%
!!! TTAGTTTTAGAATTAACTAG+AGG - chr1_3:67011468-67011487 None:intergenic 20.0%
!! GATTCATAAATAAAACATTG+TGG - chr1_3:67011838-67011857 None:intergenic 20.0%
!! TAACATATATTTGCAACATT+TGG - chr1_3:67012190-67012209 None:intergenic 20.0%
!! TAATTCTATAGATCAACTTA+AGG - chr1_3:67012791-67012810 None:intergenic 20.0%
!! TTGATCTATAGAATTATAAC+AGG + chr1_3:67012795-67012814 Msa0135380:intron 20.0%
!! CAAATATTCAATAGTAGTTA+GGG - chr1_3:67013263-67013282 None:intergenic 20.0%
!! TCAAATATTCAATAGTAGTT+AGG - chr1_3:67013264-67013283 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr1_3:67013393-67013412 None:intergenic 20.0%
!! AAATTATCCTTGTTAACTAT+TGG - chr1_3:67013480-67013499 None:intergenic 20.0%
!! AATAGTTAACAAGGATAATT+TGG + chr1_3:67013479-67013498 Msa0135380:intron 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG - chr1_3:67013512-67013531 None:intergenic 20.0%
!! TCTTTATGTATTAGTAAGAA+AGG + chr1_3:67013601-67013620 Msa0135380:intron 20.0%
!! GAAAGGAATAATATAAGATA+TGG + chr1_3:67013618-67013637 Msa0135380:intron 20.0%
!! ATGTATATGTATATCATCTA+GGG - chr1_3:67014417-67014436 None:intergenic 20.0%
!! TATGTATATGTATATCATCT+AGG - chr1_3:67014418-67014437 None:intergenic 20.0%
!!! AAGGTTTTTAAGTTTTTGTT+TGG + chr1_3:67014465-67014484 Msa0135380:intron 20.0%
!! AGTTATTCTAAATATAGCAA+TGG - chr1_3:67014752-67014771 None:intergenic 20.0%
!! AAAGTCTACTTAAGTAAAAA+TGG - chr1_3:67015264-67015283 None:intergenic 20.0%
!!! ACTTAAGTAGACTTTTTTTT+AGG + chr1_3:67015269-67015288 Msa0135380:intron 20.0%
!! AAATATAGTAATTATACACG+TGG - chr1_3:67015434-67015453 None:intergenic 20.0%
!! AAAAAACAAAAAAAAACGTG+AGG + chr1_3:67015524-67015543 Msa0135380:intron 20.0%
!!! TTGTTGATATGAATTTTGTT+TGG - chr1_3:67015661-67015680 None:intergenic 20.0%
!!! TTTAGTTTTGATGATTTTTC+TGG + chr1_3:67016315-67016334 Msa0135380:intron 20.0%
!!! TTAGTTTTGATGATTTTTCT+GGG + chr1_3:67016316-67016335 Msa0135380:intron 20.0%
!! TAATTTATTAATTACACACG+TGG + chr1_3:67016518-67016537 Msa0135380:intron 20.0%
!!! CAGATTTTTTAAAATAGAGA+AGG - chr1_3:67016781-67016800 None:intergenic 20.0%
!!! TTATCGTTTTTTTCCAATAA+AGG + chr1_3:67017044-67017063 Msa0135380:intron 20.0%
!!! TATCGTTTTTTTCCAATAAA+GGG + chr1_3:67017045-67017064 Msa0135380:intron 20.0%
!!! CTTACATATTTTTTTACTGA+AGG + chr1_3:67017092-67017111 Msa0135380:intron 20.0%
!!! AAAAAAACAAATTTTTCGCA+AGG - chr1_3:67018519-67018538 None:intergenic 20.0%
!!! AGGATTTTATTTAAACACTA+AGG + chr1_3:67018935-67018954 Msa0135380:intron 20.0%
!!! GGATTTTATTTAAACACTAA+GGG + chr1_3:67018936-67018955 Msa0135380:intron 20.0%
!!! GATTTTATTTAAACACTAAG+GGG + chr1_3:67018937-67018956 Msa0135380:intron 20.0%
!!! ATTTTATTTAAACACTAAGG+GGG + chr1_3:67018938-67018957 Msa0135380:intron 20.0%
!!! TGGACATTTATTTTCATATT+AGG - chr1_3:67019177-67019196 None:intergenic 20.0%
!! TTGGTAAATTAATTATTGGA+AGG + chr1_3:67019231-67019250 Msa0135380:intron 20.0%
!!! ATTATTGGAAGGTTTTTTTT+AGG + chr1_3:67019242-67019261 Msa0135380:intron 20.0%
!!! TTATTGGAAGGTTTTTTTTA+GGG + chr1_3:67019243-67019262 Msa0135380:intron 20.0%
!! TAATTAAAAAAATTGGTCAG+GGG - chr1_3:67019293-67019312 None:intergenic 20.0%
!!! TTCAAAAAAAGTACTTGTTT+TGG - chr1_3:67019520-67019539 None:intergenic 20.0%
!! TCCTTAAAAAATTAATGGAA+CGG - chr1_3:67019723-67019742 None:intergenic 20.0%
!! GAAAGGAGATAAAAATATTT+GGG - chr1_3:67019877-67019896 None:intergenic 20.0%
!! AGAAAGGAGATAAAAATATT+TGG - chr1_3:67019878-67019897 None:intergenic 20.0%
!!! ATAATTTTTTTAGTGTTGCT+TGG + chr1_3:67019982-67020001 Msa0135380:intron 20.0%
!!! ACTATTTAAAACTAAGTTGA+TGG + chr1_3:67020094-67020113 Msa0135380:intron 20.0%
!!! ATTTTGTGTCATGTAAATAT+TGG + chr1_3:67020365-67020384 Msa0135380:intron 20.0%
!!! TTAATTGTTCATTTTTCCTT+CGG + chr1_3:67020531-67020550 Msa0135380:intron 20.0%
!! TTATATACGTTAAAACTGAA+AGG + chr1_3:67020782-67020801 Msa0135380:intron 20.0%
!!! ATGATTTATGAAATTTTGAG+TGG + chr1_3:67021239-67021258 Msa0135380:intron 20.0%
!! TAAATAAATTCAAAACTCCA+TGG + chr1_3:67021330-67021349 Msa0135380:intron 20.0%
!! AAATAAATTCAAAACTCCAT+GGG + chr1_3:67021331-67021350 Msa0135380:intron 20.0%
!! AACACAAAATGATATAAAGT+AGG + chr1_3:67021537-67021556 Msa0135380:intron 20.0%
!! AAAGTCAAAATGATATAATC+AGG + chr1_3:67021686-67021705 Msa0135380:intron 20.0%
!! TGACAAAATATTATATTGGA+AGG - chr1_3:67021915-67021934 None:intergenic 20.0%
!!! TAAAATTCAAAAGGTATAGA+AGG - chr1_3:67022161-67022180 None:intergenic 20.0%
!!! TTCTATACCTTTTGAATTTT+AGG + chr1_3:67022160-67022179 Msa0135380:intron 20.0%
!!! AACTCTTATATCAATTCTTT+TGG - chr1_3:67022673-67022692 None:intergenic 20.0%
!!! TTCTAGTTCTTATAGTAAAA+TGG - chr1_3:67023181-67023200 None:intergenic 20.0%
!!! AATCTAAAACAAAAGTGAAA+GGG - chr1_3:67023970-67023989 None:intergenic 20.0%
!!! TAATCTAAAACAAAAGTGAA+AGG - chr1_3:67023971-67023990 None:intergenic 20.0%
!!! TTTGTATATATATAGCCTTT+TGG + chr1_3:67024441-67024460 Msa0135380:intron 20.0%
!! AACTGTGATAATTTAATGTT+TGG + chr1_3:67024733-67024752 Msa0135380:intron 20.0%
!! TGATAATTTAATGTTTGGTT+CGG + chr1_3:67024738-67024757 Msa0135380:intron 20.0%
!!! AGACCATAAAAATTTACTTT+TGG + chr1_3:67025229-67025248 Msa0135380:CDS 20.0%
!!! GACCATAAAAATTTACTTTT+GGG + chr1_3:67025230-67025249 Msa0135380:CDS 20.0%
!!! ATCCCAAAAGTAAATTTTTA+TGG - chr1_3:67025235-67025254 None:intergenic 20.0%
! CTTTAAGTGTGTAATTGTTT+AGG + chr1_3:67009674-67009693 Msa0135380:intron 25.0%
! ACATAATTCACAATTCCTAT+CGG - chr1_3:67009914-67009933 None:intergenic 25.0%
!!! GTGTTAACAGTTTAATTTGA+TGG + chr1_3:67010300-67010319 Msa0135380:intron 25.0%
!!! TGTATTTACCCATTGTTTTA+AGG + chr1_3:67010388-67010407 Msa0135380:intron 25.0%
!!! GTATTTACCCATTGTTTTAA+GGG + chr1_3:67010389-67010408 Msa0135380:intron 25.0%
! AGTAAATCCCTTAAAACAAT+GGG - chr1_3:67010399-67010418 None:intergenic 25.0%
! TAGTAAATCCCTTAAAACAA+TGG - chr1_3:67010400-67010419 None:intergenic 25.0%
! GAGTTATAAAGAAATGTCAA+AGG - chr1_3:67010565-67010584 None:intergenic 25.0%
! TCAATAAAAACCGAAAAACA+TGG - chr1_3:67010682-67010701 None:intergenic 25.0%
!! AAAAAGGAATACACTCTTTT+GGG - chr1_3:67010991-67011010 None:intergenic 25.0%
!! AAAAAAGGAATACACTCTTT+TGG - chr1_3:67010992-67011011 None:intergenic 25.0%
! ACATAAAAAAAAGAGTGGTT+GGG + chr1_3:67011203-67011222 Msa0135380:intron 25.0%
! AATAATATATGTAAGGTCTG+GGG - chr1_3:67011236-67011255 None:intergenic 25.0%
!! ATTTTTGTATCACCCATTTT+GGG - chr1_3:67011421-67011440 None:intergenic 25.0%
!! AATTTTTGTATCACCCATTT+TGG - chr1_3:67011422-67011441 None:intergenic 25.0%
!!! TTTTAGAATTAACTAGAGGA+TGG - chr1_3:67011464-67011483 None:intergenic 25.0%
! TGATTCAAGTAAGAAATATG+AGG - chr1_3:67011787-67011806 None:intergenic 25.0%
! AAGCATTATTGTTTCACAAT+AGG + chr1_3:67011937-67011956 Msa0135380:intron 25.0%
!!! AGGTGTTTTAATAGTTTGTT+GGG - chr1_3:67011998-67012017 None:intergenic 25.0%
!!! TAGGTGTTTTAATAGTTTGT+TGG - chr1_3:67011999-67012018 None:intergenic 25.0%
!! ATTTTGTAGGTTATATTTGG+AGG - chr1_3:67012066-67012085 None:intergenic 25.0%
! TCCAAATATAACCTACAAAA+TGG + chr1_3:67012065-67012084 Msa0135380:intron 25.0%
!! TCCATTTTGTAGGTTATATT+TGG - chr1_3:67012069-67012088 None:intergenic 25.0%
!!! GTTAGTTATAATTTGTTGGT+AGG + chr1_3:67012220-67012239 Msa0135380:intron 25.0%
!!! TACCTTTTGAATTTTTGGTT+AGG + chr1_3:67012323-67012342 Msa0135380:intron 25.0%
! AACCTAACCAAAAATTCAAA+AGG - chr1_3:67012328-67012347 None:intergenic 25.0%
!!! GGTTAGGTTTTATTTTGAAT+TGG + chr1_3:67012339-67012358 Msa0135380:intron 25.0%
! TAGAATTATAACAGGTTCTT+TGG + chr1_3:67012803-67012822 Msa0135380:intron 25.0%
! CTAAATTGACACATAAGATA+TGG - chr1_3:67012911-67012930 None:intergenic 25.0%
! TCTTCAAAGTATACATACAA+TGG - chr1_3:67012947-67012966 None:intergenic 25.0%
!!! TTTTTTAGCATCTACTGAAT+AGG - chr1_3:67013152-67013171 None:intergenic 25.0%
! ATTCAGTAGATGCTAAAAAA+TGG + chr1_3:67013152-67013171 Msa0135380:intron 25.0%
! TGCTAAAAAATGGATATGAT+CGG + chr1_3:67013162-67013181 Msa0135380:intron 25.0%
! TTTGATTGAATTACGGAAAA+AGG + chr1_3:67013279-67013298 Msa0135380:intron 25.0%
!!! AAGCGACATTCATTTTAAAA+CGG - chr1_3:67013327-67013346 None:intergenic 25.0%
! AAACTAACCAATAGTTAACA+AGG + chr1_3:67013470-67013489 Msa0135380:intron 25.0%
! TATAAGATATGGCAGAATTA+AGG + chr1_3:67013629-67013648 Msa0135380:intron 25.0%
! CCTAAACCTAAAAACTAATA+CGG + chr1_3:67013968-67013987 Msa0135380:intron 25.0%
!!! CAATTACCGTATTAGTTTTT+AGG - chr1_3:67013977-67013996 None:intergenic 25.0%
! TGTAGTTCGTAAACTTATAA+AGG - chr1_3:67014011-67014030 None:intergenic 25.0%
!! GTCTTTTTATAATCAAAGTG+CGG + chr1_3:67014230-67014249 Msa0135380:intron 25.0%
!! TCTTTTTATAATCAAAGTGC+GGG + chr1_3:67014231-67014250 Msa0135380:intron 25.0%
! TTATAATCACACATCAATTG+CGG + chr1_3:67014653-67014672 Msa0135380:intron 25.0%
!! ATACTATGCATTTTACCAAT+TGG + chr1_3:67014912-67014931 Msa0135380:intron 25.0%
!! TACTATGCATTTTACCAATT+GGG + chr1_3:67014913-67014932 Msa0135380:intron 25.0%
!!! GTTATTGTTAGTTGATGAAT+TGG - chr1_3:67014962-67014981 None:intergenic 25.0%
!! AAAAAACAAAGCTTTAACCA+AGG + chr1_3:67015087-67015106 Msa0135380:intron 25.0%
! TGAAGAAAAATTGCAAAGAT+TGG - chr1_3:67016004-67016023 None:intergenic 25.0%
! CTACTAAAGTAGACTTAAAA+AGG + chr1_3:67016707-67016726 Msa0135380:intron 25.0%
! ATTGATGTAAACTAAACAGT+AGG + chr1_3:67016813-67016832 Msa0135380:intron 25.0%
! AATCTCATATACGATAGAAT+AGG - chr1_3:67016858-67016877 None:intergenic 25.0%
! AATATTGAATGTCGTGAAAA+CGG - chr1_3:67016888-67016907 None:intergenic 25.0%
! TCGAATCAAAAATAGTTGAT+TGG - chr1_3:67017016-67017035 None:intergenic 25.0%
!! TTTTCCAATAAAGGGTTTTA+TGG + chr1_3:67017053-67017072 Msa0135380:intron 25.0%
!!! GGGATTGAATATTTTTTGTT+AGG - chr1_3:67017193-67017212 None:intergenic 25.0%
! CTAAATCAATTCTATCGTTA+TGG - chr1_3:67017730-67017749 None:intergenic 25.0%
!! CATAACGATAGAATTGATTT+AGG + chr1_3:67017728-67017747 Msa0135380:intron 25.0%
!!! CATTTTTTATTTCTACACAC+AGG - chr1_3:67017961-67017980 None:intergenic 25.0%
! TGACATGTATTTAAGAATAG+AGG + chr1_3:67018780-67018799 Msa0135380:intron 25.0%
! GACATGTATTTAAGAATAGA+GGG + chr1_3:67018781-67018800 Msa0135380:intron 25.0%
!!! ATTTTGAGGGAAAAAATGAA+AGG + chr1_3:67018882-67018901 Msa0135380:intron 25.0%
!! TACGTATTTGGTTTCTTATT+TGG + chr1_3:67019051-67019070 Msa0135380:intron 25.0%
!! CAAACTTCTCTACAATTTTA+AGG + chr1_3:67019457-67019476 Msa0135380:intron 25.0%
!!! TACAATTTTAAGGAGAAGTT+AGG + chr1_3:67019467-67019486 Msa0135380:intron 25.0%
! TTTGAACGCATAAAATTGAA+TGG + chr1_3:67019534-67019553 Msa0135380:intron 25.0%
!!! ACCGTTCCATTAATTTTTTA+AGG + chr1_3:67019719-67019738 Msa0135380:intron 25.0%
!!! GTTCCATTAATTTTTTAAGG+AGG + chr1_3:67019722-67019741 Msa0135380:intron 25.0%
! GAACCTCCTTAAAAAATTAA+TGG - chr1_3:67019728-67019747 None:intergenic 25.0%
! TGTCATAGAGTTACTAAAAA+GGG - chr1_3:67020398-67020417 None:intergenic 25.0%
! ATGTCATAGAGTTACTAAAA+AGG - chr1_3:67020399-67020418 None:intergenic 25.0%
! TTTGTAAAAAAATTGTCCGA+AGG - chr1_3:67020550-67020569 None:intergenic 25.0%
! TTTGACTACCCATTATTATA+TGG + chr1_3:67021079-67021098 Msa0135380:intron 25.0%
! TTGTGTGTCCATATAATAAT+GGG - chr1_3:67021090-67021109 None:intergenic 25.0%
! TTTGTGTGTCCATATAATAA+TGG - chr1_3:67021091-67021110 None:intergenic 25.0%
!!! AATTTTGAGTGGATTATGTA+TGG + chr1_3:67021250-67021269 Msa0135380:intron 25.0%
! ATTTAATATCCAGTTCTTTC+AGG - chr1_3:67021606-67021625 None:intergenic 25.0%
! ATGAAAACATATTTAGTCAG+CGG - chr1_3:67021782-67021801 None:intergenic 25.0%
! ATGAATGTTTATGAGGTAAA+AGG - chr1_3:67022128-67022147 None:intergenic 25.0%
! AGATCATATGAATGTTTATG+AGG - chr1_3:67022135-67022154 None:intergenic 25.0%
!! TTCTTTCCTTCATTGAATTT+TGG + chr1_3:67022203-67022222 Msa0135380:intron 25.0%
!! TCTTTCCTTCATTGAATTTT+GGG + chr1_3:67022204-67022223 Msa0135380:intron 25.0%
! AATAAAAGAGTTGTCAAAGA+AGG + chr1_3:67022401-67022420 Msa0135380:intron 25.0%
! AAGTTGCATTTCAAAATAAG+AGG + chr1_3:67022604-67022623 Msa0135380:intron 25.0%
! AGTTGCATTTCAAAATAAGA+GGG + chr1_3:67022605-67022624 Msa0135380:intron 25.0%
! GTATTATTCTACTGAAGAAT+TGG - chr1_3:67022941-67022960 None:intergenic 25.0%
!! TCGATTAGTTGTCAAAAAAA+TGG + chr1_3:67023219-67023238 Msa0135380:intron 25.0%
! CAGTAGTTCAATAGTAAATA+GGG - chr1_3:67023381-67023400 None:intergenic 25.0%
! TCAGTAGTTCAATAGTAAAT+AGG - chr1_3:67023382-67023401 None:intergenic 25.0%
! ATGAATTTAAGTCTACCAAT+GGG - chr1_3:67023695-67023714 None:intergenic 25.0%
! AGTTTACCTATTTACTTGTT+TGG + chr1_3:67024141-67024160 Msa0135380:intron 25.0%
!! TTCATATGTCTTGTTGAATA+TGG + chr1_3:67024260-67024279 Msa0135380:intron 25.0%
!! AACTCTTACATCAATTCTTT+TGG - chr1_3:67025180-67025199 None:intergenic 25.0%
GATTACAATATCATGTCACT+AGG + chr1_3:67009241-67009260 Msa0135380:intron 30.0%
TGTTGTATGAAATAAAGTGC+AGG + chr1_3:67009318-67009337 Msa0135380:intron 30.0%
ATATCGTGTAATTAAGTTCG+CGG + chr1_3:67009594-67009613 Msa0135380:intron 30.0%
GTGACTATGGTTATGAATTA+CGG - chr1_3:67009805-67009824 None:intergenic 30.0%
TCAAGAGAATTATGTGACTA+TGG - chr1_3:67009818-67009837 None:intergenic 30.0%
AGAAATAAAGGGAAACTGAA+GGG - chr1_3:67010021-67010040 None:intergenic 30.0%
CAATCTTCCATATTCAATCA+TGG + chr1_3:67010078-67010097 Msa0135380:intron 30.0%
TCTTTCGATAAAAGTTTGTG+CGG + chr1_3:67010137-67010156 Msa0135380:intron 30.0%
GGAAAATGCAAAGAATTCAA+AGG + chr1_3:67010170-67010189 Msa0135380:intron 30.0%
ATCTCCTTCAAATGAATTTG+TGG + chr1_3:67010204-67010223 Msa0135380:intron 30.0%
TCTCCTTCAAATGAATTTGT+GGG + chr1_3:67010205-67010224 Msa0135380:intron 30.0%
TTTCCCACAAATTCATTTGA+AGG - chr1_3:67010211-67010230 None:intergenic 30.0%
TGTGGGAAATATATAAAGCT+AGG + chr1_3:67010222-67010241 Msa0135380:intron 30.0%
TTTAGTGACAACTCAAGATA+AGG + chr1_3:67010361-67010380 Msa0135380:intron 30.0%
GACATAAAAAAAAGAGTGGT+TGG + chr1_3:67011202-67011221 Msa0135380:intron 30.0%
!! TTGTGTAGTTTTACTGAGTT+AGG - chr1_3:67011385-67011404 None:intergenic 30.0%
!! CTAATTAAAGGTATTCGATG+CGG + chr1_3:67011484-67011503 Msa0135380:intron 30.0%
! ATCTTGTTGTCATTATTCCT+GGG - chr1_3:67011556-67011575 None:intergenic 30.0%
! TATCTTGTTGTCATTATTCC+TGG - chr1_3:67011557-67011576 None:intergenic 30.0%
!!! TTTTTTTAGAGGTGACATGT+AGG - chr1_3:67011598-67011617 None:intergenic 30.0%
! TTGTGGGTTATGAATAAAAG+AGG - chr1_3:67011821-67011840 None:intergenic 30.0%
TGTTCATCTTTGATCTACTT+TGG - chr1_3:67011860-67011879 None:intergenic 30.0%
!! TGATGATGGTGTAAGAAATT+TGG - chr1_3:67012022-67012041 None:intergenic 30.0%
ATTTCTTACACCATCATCAT+TGG + chr1_3:67012023-67012042 Msa0135380:intron 30.0%
AGTGAAATTGTATGATTGAG+TGG - chr1_3:67012161-67012180 None:intergenic 30.0%
!!! AGGTAGTTTGTTTTGTTAGA+AGG + chr1_3:67012240-67012259 Msa0135380:intron 30.0%
! AGAACTTCTGAAAGATTTCA+AGG + chr1_3:67012514-67012533 Msa0135380:intron 30.0%
TCCTTGAATTGTTGTATGAA+AGG + chr1_3:67012839-67012858 Msa0135380:intron 30.0%
TCCTTTCATACAACAATTCA+AGG - chr1_3:67012843-67012862 None:intergenic 30.0%
TGTATGAAAGGAATTTCATG+AGG + chr1_3:67012851-67012870 Msa0135380:intron 30.0%
!!! GACATTCATTTTAAAACGGA+GGG - chr1_3:67013323-67013342 None:intergenic 30.0%
TTAGACAGGAAAAAAGCAAA+CGG - chr1_3:67013665-67013684 None:intergenic 30.0%
AAAAAATACCCACAATGGAT+AGG + chr1_3:67013752-67013771 Msa0135380:intron 30.0%
AAAAATACCCACAATGGATA+GGG + chr1_3:67013753-67013772 Msa0135380:intron 30.0%
TAATTACCCGCAAATTTAGA+TGG + chr1_3:67013814-67013833 Msa0135380:intron 30.0%
AATTACCCGCAAATTTAGAT+GGG + chr1_3:67013815-67013834 Msa0135380:intron 30.0%
!!! CCGTATTAGTTTTTAGGTTT+AGG - chr1_3:67013971-67013990 None:intergenic 30.0%
!!! ATGGACATTTTTTACAAACG+CGG + chr1_3:67014341-67014360 Msa0135380:intron 30.0%
ATATGTATATCATCTAGGGA+TGG - chr1_3:67014413-67014432 None:intergenic 30.0%
CGGTAATAATTGTTTCAACT+AGG + chr1_3:67014550-67014569 Msa0135380:intron 30.0%
ATAAATCAGAGTAAAAGAGC+TGG - chr1_3:67014637-67014656 None:intergenic 30.0%
ATTGACAACCACAATATTGT+GGG + chr1_3:67014684-67014703 Msa0135380:intron 30.0%
TTACTGCATATATACCCAAT+TGG - chr1_3:67014930-67014949 None:intergenic 30.0%
!! AAAAGGTTTGATTTGCAAAG+GGG - chr1_3:67016576-67016595 None:intergenic 30.0%
!! CAAAAGGTTTGATTTGCAAA+GGG - chr1_3:67016575-67016594 None:intergenic 30.0%
!! TCAAAAGGTTTGATTTGCAA+AGG - chr1_3:67015388-67015407 None:intergenic 30.0%
!! ACCTTTTGATCAATTTTGAC+CGG + chr1_3:67015399-67015418 Msa0135380:intron 30.0%
GTTATTCAATAAAGAGGACT+TGG - chr1_3:67015745-67015764 None:intergenic 30.0%
! GTTCTGGTTATTCAATAAAG+AGG - chr1_3:67015751-67015770 None:intergenic 30.0%
!! GTTTGGTTCTTTGATAATCA+AGG + chr1_3:67016181-67016200 Msa0135380:intron 30.0%
! GTTTAAAGAATGATGGTGAT+GGG + chr1_3:67016260-67016279 Msa0135380:intron 30.0%
!! TTTGATGATTTTTCTGGGTT+TGG + chr1_3:67016321-67016340 Msa0135380:intron 30.0%
!! CAAAAGGTTTGATTTGCAAA+GGG + chr1_3:67016575-67016594 Msa0135380:intron 30.0%
!! AAAAGGTTTGATTTGCAAAG+GGG + chr1_3:67016576-67016595 Msa0135380:intron 30.0%
! ACTAAACAGTAGGTTTTTGT+AGG + chr1_3:67016823-67016842 Msa0135380:intron 30.0%
!!! AAATGTTTTAACCCACAAAC+AGG + chr1_3:67017119-67017138 Msa0135380:intron 30.0%
! GTATTTTCGTCAGTTTGTAT+GGG - chr1_3:67017213-67017232 None:intergenic 30.0%
!!! GTATTTTGGTCAGTTTGTAT+GGG + chr1_3:67017393-67017412 Msa0135380:intron 30.0%
! GATTTTTGATATAAGCAACC+CGG + chr1_3:67017444-67017463 Msa0135380:intron 30.0%
CTTGTCACCAAATAGATAAA+AGG + chr1_3:67017467-67017486 Msa0135380:intron 30.0%
TCACCAAATAGATAAAAGGA+AGG + chr1_3:67017471-67017490 Msa0135380:intron 30.0%
! CTTCCTTCCTTTTATCTATT+TGG - chr1_3:67017477-67017496 None:intergenic 30.0%
CAAATAGATAAAAGGAAGGA+AGG + chr1_3:67017475-67017494 Msa0135380:intron 30.0%
AAGCCTACAAATCCAAATAA+TGG + chr1_3:67017573-67017592 Msa0135380:intron 30.0%
! GCATTTTTAATACTCACCAA+TGG + chr1_3:67017696-67017715 Msa0135380:intron 30.0%
TCAATTCTATCGTTATGGTA+CGG - chr1_3:67017725-67017744 None:intergenic 30.0%
TTGAATCTCGCAATTAAATC+TGG - chr1_3:67017794-67017813 None:intergenic 30.0%
TCTTTATCATCATCATCCAA+TGG - chr1_3:67017850-67017869 None:intergenic 30.0%
GATGATGATAAAGAACAAAG+TGG + chr1_3:67017856-67017875 Msa0135380:intron 30.0%
TGTATGAAATGAACTTCATG+AGG + chr1_3:67018019-67018038 Msa0135380:intron 30.0%
CATACAATAGACACATAAGA+CGG - chr1_3:67018086-67018105 None:intergenic 30.0%
TCAAAAGAGAAAATCTTGTG+TGG + chr1_3:67018264-67018283 Msa0135380:intron 30.0%
TTTGATCCTGCAAATATGAT+CGG + chr1_3:67018448-67018467 Msa0135380:intron 30.0%
!!! AATATGATCGGTTTGAGTTT+TGG + chr1_3:67018460-67018479 Msa0135380:intron 30.0%
CATAAAAAAACTGAGCCTAA+AGG - chr1_3:67018554-67018573 None:intergenic 30.0%
!!! GGCTCAGTTTTTTTATGATT+TGG + chr1_3:67018557-67018576 Msa0135380:intron 30.0%
TATACACTATCCACATAGAA+CGG - chr1_3:67018589-67018608 None:intergenic 30.0%
TATTTAAGAATAGAGGGAGT+AGG + chr1_3:67018787-67018806 Msa0135380:intron 30.0%
AATCAATATGGATCATGTTG+AGG - chr1_3:67018824-67018843 None:intergenic 30.0%
TTAGAAATTTGCATGCTTTG+TGG + chr1_3:67018966-67018985 Msa0135380:intron 30.0%
TAGAAATTTGCATGCTTTGT+GGG + chr1_3:67018967-67018986 Msa0135380:intron 30.0%
GAAACCAAATACGTAAATTG+AGG - chr1_3:67019046-67019065 None:intergenic 30.0%
GGGTAAAATGGTAAATTCAA+TGG - chr1_3:67019197-67019216 None:intergenic 30.0%
ATGTAGAAGCAACTGAATTT+GGG - chr1_3:67019394-67019413 None:intergenic 30.0%
AATGTAGAAGCAACTGAATT+TGG - chr1_3:67019395-67019414 None:intergenic 30.0%
GTAACAAAAAAACAGACAGA+CGG - chr1_3:67019952-67019971 None:intergenic 30.0%
!! AAAACTAAGTTGATGGTTCA+TGG + chr1_3:67020101-67020120 Msa0135380:intron 30.0%
!! TTGATGGTTCATGGTTTTTA+AGG + chr1_3:67020110-67020129 Msa0135380:intron 30.0%
AAGGATAGATGGTAAAATGA+CGG - chr1_3:67020172-67020191 None:intergenic 30.0%
GATTACATTGAAAGGATAGA+TGG - chr1_3:67020183-67020202 None:intergenic 30.0%
ATGCTTAGTAATATTCAGTC+TGG - chr1_3:67020208-67020227 None:intergenic 30.0%
! ATTAAAGCTTTATCAAGAGC+AGG - chr1_3:67020470-67020489 None:intergenic 30.0%
TCGCATAATCCAAATATTTG+TGG - chr1_3:67020607-67020626 None:intergenic 30.0%
CTTCGTAAATTTGAGAATGA+AGG - chr1_3:67020630-67020649 None:intergenic 30.0%
AAGGAGAGATGTTCAAATTA+CGG - chr1_3:67020664-67020683 None:intergenic 30.0%
AGTCCTTTCATGTGAATTAT+AGG - chr1_3:67020709-67020728 None:intergenic 30.0%
TTGCAGTTAATATCTGTCTT+TGG + chr1_3:67020739-67020758 Msa0135380:intron 30.0%
ATTTAGTATTCAGTCCTTTC+AGG - chr1_3:67020870-67020889 None:intergenic 30.0%
TTTCACATGATCTACATCAA+AGG - chr1_3:67020908-67020927 None:intergenic 30.0%
TTTGATGTAGATCATGTGAA+AGG + chr1_3:67020907-67020926 Msa0135380:intron 30.0%
TGTGAAAGGATTTATATACG+TGG + chr1_3:67020921-67020940 Msa0135380:intron 30.0%
TATCCACGGGTATAATAAAT+GGG + chr1_3:67021054-67021073 Msa0135380:intron 30.0%
! GTTTTATGATGTGAATGAAG+TGG - chr1_3:67021177-67021196 None:intergenic 30.0%
CGAGTATCATATTTATCCAA+CGG + chr1_3:67021422-67021441 Msa0135380:intron 30.0%
GAGTATCATATTTATCCAAC+GGG + chr1_3:67021423-67021442 Msa0135380:intron 30.0%
AGTATCATATTTATCCAACG+GGG + chr1_3:67021424-67021443 Msa0135380:intron 30.0%
AAATGTCAATTGATACCCAT+GGG - chr1_3:67021476-67021495 None:intergenic 30.0%
ATGATATAAAGTAGGTAGAG+AGG + chr1_3:67021545-67021564 Msa0135380:intron 30.0%
TTTCACATGATCTACAACAA+AGG - chr1_3:67021644-67021663 None:intergenic 30.0%
! TTTGTTGTAGATCATGTGAA+AGG + chr1_3:67021643-67021662 Msa0135380:intron 30.0%
ATGATATAATCAGGTAGCTT+TGG + chr1_3:67021695-67021714 Msa0135380:intron 30.0%
! CTAGTTTGTAATACAAACTC+AGG + chr1_3:67021974-67021993 Msa0135380:intron 30.0%
AGCAGAACCTAAAATTCAAA+AGG - chr1_3:67022170-67022189 None:intergenic 30.0%
TGATGCAATGGAGTTTATAA+AGG + chr1_3:67022295-67022314 Msa0135380:CDS 30.0%
AACTTGTGTTTCAAGATAAG+AGG + chr1_3:67022324-67022343 Msa0135380:intron 30.0%
ACTTGTGTTTCAAGATAAGA+GGG + chr1_3:67022325-67022344 Msa0135380:intron 30.0%
ACATGAAATCTCATTTCCAT+TGG + chr1_3:67022490-67022509 Msa0135380:intron 30.0%
! TTTTGGCATTGTAATCAACT+AGG - chr1_3:67022656-67022675 None:intergenic 30.0%
GATATAAGAGTTGTCAAAGA+AGG + chr1_3:67022681-67022700 Msa0135380:intron 30.0%
!! AGAGCATCAAGATTTACTTT+TGG + chr1_3:67022722-67022741 Msa0135380:intron 30.0%
!! GAGCATCAAGATTTACTTTT+GGG + chr1_3:67022723-67022742 Msa0135380:intron 30.0%
AATCCAAGAAAAGAGCAAAA+AGG - chr1_3:67022907-67022926 None:intergenic 30.0%
CACACTTTCTTATAGATTCA+TGG - chr1_3:67023292-67023311 None:intergenic 30.0%
GAAACACAAGATGTATATGA+AGG + chr1_3:67023407-67023426 Msa0135380:intron 30.0%
! GAAAGAAGTATGATAATGTG+AGG - chr1_3:67023625-67023644 None:intergenic 30.0%
GATGAATTTAAGTCTACCAA+TGG - chr1_3:67023696-67023715 None:intergenic 30.0%
TCAACAACATATTGAGTTTG+CGG - chr1_3:67023781-67023800 None:intergenic 30.0%
TTTGGACTTGATTCAAATTG+TGG + chr1_3:67024005-67024024 Msa0135380:intron 30.0%
TAGGTAAACTCATTGTAAGT+GGG - chr1_3:67024131-67024150 None:intergenic 30.0%
ATAGGTAAACTCATTGTAAG+TGG - chr1_3:67024132-67024151 None:intergenic 30.0%
!! TTGTAACTGATTTTGCTTTG+TGG + chr1_3:67024412-67024431 Msa0135380:intron 30.0%
! TATATATATAGCCTTTTGGC+TGG + chr1_3:67024445-67024464 Msa0135380:intron 30.0%
! GACTCTTCTATCAATTCTTT+TGG - chr1_3:67024922-67024941 None:intergenic 30.0%
TGTTGTAAATCATCATCCAA+TGG - chr1_3:67025038-67025057 None:intergenic 30.0%
! GGCATTTTTAACAACAGTTA+AGG + chr1_3:67025091-67025110 Msa0135380:CDS 30.0%
GGTTACATTTGAAGATAAGA+TGG + chr1_3:67025112-67025131 Msa0135380:CDS 30.0%
! TTACATCAATTCTTTTGGCA+CGG - chr1_3:67025175-67025194 None:intergenic 30.0%
GTAATCTGCAAAGCATACAA+TGG - chr1_3:67009424-67009443 None:intergenic 35.0%
!! TCTTTTTCTTATTTGCAGCC+TGG + chr1_3:67009713-67009732 Msa0135380:intron 35.0%
TTCTCTTGACAGACATGAAT+TGG + chr1_3:67009829-67009848 Msa0135380:intron 35.0%
GAAACTGAAGGGAACTTAAT+GGG - chr1_3:67010010-67010029 None:intergenic 35.0%
GAGAAATAAAGGGAAACTGA+AGG - chr1_3:67010022-67010041 None:intergenic 35.0%
ACAGACTCCATGATTGAATA+TGG - chr1_3:67010088-67010107 None:intergenic 35.0%
ATATTCAATCATGGAGTCTG+TGG + chr1_3:67010087-67010106 Msa0135380:intron 35.0%
TATTCAATCATGGAGTCTGT+GGG + chr1_3:67010088-67010107 Msa0135380:intron 35.0%
! TAAAAGTTTGTGCGGTTTTG+AGG + chr1_3:67010145-67010164 Msa0135380:intron 35.0%
! GTTTTGCTAACGAATGTCTT+CGG - chr1_3:67010518-67010537 None:intergenic 35.0%
GATTGTTCATCATGTTGTTG+TGG + chr1_3:67010871-67010890 Msa0135380:intron 35.0%
AGTGTATATCGACCCAAAAT+GGG + chr1_3:67011406-67011425 Msa0135380:intron 35.0%
GATGGTGTAAGAAATTTGGT+AGG - chr1_3:67012018-67012037 None:intergenic 35.0%
AGAGATGTATCCAATGATGA+TGG - chr1_3:67012036-67012055 None:intergenic 35.0%
AGGTTGTGGTTATAAACAGT+GGG - chr1_3:67012122-67012141 None:intergenic 35.0%
TAGGTTGTGGTTATAAACAG+TGG - chr1_3:67012123-67012142 None:intergenic 35.0%
AAAGAATGTGAGATAGGTTG+TGG - chr1_3:67012136-67012155 None:intergenic 35.0%
GTGGAAAAAGAATGTGAGAT+AGG - chr1_3:67012142-67012161 None:intergenic 35.0%
CAGCTTCTGTATCAATTCTT+TGG - chr1_3:67012541-67012560 None:intergenic 35.0%
ACATGAAATCTCACTTCCAT+TGG + chr1_3:67012637-67012656 Msa0135380:intron 35.0%
TGTTGTTGATCATCATCCAA+TGG - chr1_3:67012656-67012675 None:intergenic 35.0%
TTGGATGATGATCAACAACA+AGG + chr1_3:67012656-67012675 Msa0135380:intron 35.0%
! CAGAATGATGATGAACTTCA+AGG + chr1_3:67012704-67012723 Msa0135380:intron 35.0%
TGACAATGATAAGATCCTGT+AGG - chr1_3:67013199-67013218 None:intergenic 35.0%
!!! CGACATTCATTTTAAAACGG+AGG - chr1_3:67013324-67013343 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr1_3:67013427-67013446 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - chr1_3:67013431-67013450 None:intergenic 35.0%
! TTCAAAATGAGCGTCGTTTA+AGG - chr1_3:67013560-67013579 None:intergenic 35.0%
!! AAACGACGCTCATTTTGAAA+CGG + chr1_3:67013561-67013580 Msa0135380:intron 35.0%
TGCAGATAGATACTTTAGAC+AGG - chr1_3:67013679-67013698 None:intergenic 35.0%
TAAATTTGCGGGTAATTACC+CGG - chr1_3:67013812-67013831 None:intergenic 35.0%
TATAATCAAAGTGCGGGTAA+TGG + chr1_3:67014237-67014256 Msa0135380:intron 35.0%
ATAATCAAAGTGCGGGTAAT+GGG + chr1_3:67014238-67014257 Msa0135380:intron 35.0%
!!! TGGACATTTTTTACAAACGC+GGG + chr1_3:67014342-67014361 Msa0135380:intron 35.0%
!!! ATTTTTTACAAACGCGGGTA+TGG + chr1_3:67014347-67014366 Msa0135380:intron 35.0%
!!! TTTTTTACAAACGCGGGTAT+GGG + chr1_3:67014348-67014367 Msa0135380:intron 35.0%
TATTATTGTACCCTACCCAT+TGG + chr1_3:67014377-67014396 Msa0135380:intron 35.0%
ATTATTGTACCCTACCCATT+GGG + chr1_3:67014378-67014397 Msa0135380:intron 35.0%
!!! TTTTTTTGGTTTTGACCCTG+AGG + chr1_3:67014510-67014529 Msa0135380:intron 35.0%
TTTCAACTAGGAATCGAACT+CGG + chr1_3:67014562-67014581 Msa0135380:intron 35.0%
ATTGTGGTTGTCAATGTATC+AGG - chr1_3:67014679-67014698 None:intergenic 35.0%
CATTGACAACCACAATATTG+TGG + chr1_3:67014683-67014702 Msa0135380:intron 35.0%
TTGACAACCACAATATTGTG+GGG + chr1_3:67014685-67014704 Msa0135380:intron 35.0%
ATGACGAACATTTCTGTTTG+AGG - chr1_3:67015065-67015084 None:intergenic 35.0%
TCGCAACATTGTCAAAGTTA+GGG - chr1_3:67016648-67016667 None:intergenic 35.0%
ATCGCAACATTGTCAAAGTT+AGG - chr1_3:67016647-67016666 None:intergenic 35.0%
! CTTTGACAATGTTGCGATTT+TGG + chr1_3:67015317-67015336 Msa0135380:intron 35.0%
!! CCTTTTGATCAATTTTGACC+GGG + chr1_3:67015400-67015419 Msa0135380:intron 35.0%
AAAAAAACGTGAGGAGAAGA+AGG + chr1_3:67015533-67015552 Msa0135380:intron 35.0%
AAAAAACGTGAGGAGAAGAA+GGG + chr1_3:67015534-67015553 Msa0135380:intron 35.0%
!! GACTTTCATTTTTGTGGTTC+TGG - chr1_3:67015767-67015786 None:intergenic 35.0%
!! GATGTGGACTTTCATTTTTG+TGG - chr1_3:67015773-67015792 None:intergenic 35.0%
AAGCTTGTCACATTGAAAAG+AGG - chr1_3:67015981-67016000 None:intergenic 35.0%
ATGAGGTTCGTAATTCTTCT+AGG - chr1_3:67016059-67016078 None:intergenic 35.0%
! TTTAGGATTAGGTTTCTGTG+TGG + chr1_3:67016116-67016135 Msa0135380:intron 35.0%
CAAGGTAATTTGAACGAAGA+TGG + chr1_3:67016199-67016218 Msa0135380:intron 35.0%
! GGTTTAAAGAATGATGGTGA+TGG + chr1_3:67016259-67016278 Msa0135380:intron 35.0%
!! AATGATGGTGATGGGAAAAA+CGG + chr1_3:67016268-67016287 Msa0135380:intron 35.0%
! TGGGTTTGGATGAATTTTGT+GGG + chr1_3:67016335-67016354 Msa0135380:intron 35.0%
! GATGAATTTTGTGGGTTTTG+TGG + chr1_3:67016343-67016362 Msa0135380:intron 35.0%
! TGGATGAATTCTGGATTTTG+TGG + chr1_3:67016363-67016382 Msa0135380:intron 35.0%
! GGATGAATTCTGGATTTTGT+GGG + chr1_3:67016364-67016383 Msa0135380:intron 35.0%
! CCTTTGCAAATCAAACCTTT+TGG - chr1_3:67015385-67015404 None:intergenic 35.0%
!! CCAAAAGGTTTGATTTGCAA+AGG + chr1_3:67016574-67016593 Msa0135380:intron 35.0%
! CTTTGACAATGTTGCGATTT+TGG - chr1_3:67015317-67015336 None:intergenic 35.0%
ATCGCAACATTGTCAAAGTT+AGG + chr1_3:67016647-67016666 Msa0135380:intron 35.0%
TCGCAACATTGTCAAAGTTA+GGG + chr1_3:67016648-67016667 Msa0135380:intron 35.0%
CATATACGATAGAATAGGTC+TGG - chr1_3:67016853-67016872 None:intergenic 35.0%
GACACCATAAAACCCTTTAT+TGG - chr1_3:67017060-67017079 None:intergenic 35.0%
ACTGTGTTGTGCGTATATAT+AGG + chr1_3:67017151-67017170 Msa0135380:intron 35.0%
! GGTATTTTCGTCAGTTTGTA+TGG - chr1_3:67017214-67017233 None:intergenic 35.0%
!!! GGTATTTTGGTCAGTTTGTA+TGG + chr1_3:67017392-67017411 Msa0135380:intron 35.0%
! TTATCTATTTGGTGACAAGC+CGG - chr1_3:67017466-67017485 None:intergenic 35.0%
TAGATAAAAGGAAGGAAGGT+TGG + chr1_3:67017479-67017498 Msa0135380:intron 35.0%
ATTTGGATTTGTAGGCTTCA+CGG - chr1_3:67017571-67017590 None:intergenic 35.0%
CCTACAAATCCAAATAATGG+CGG + chr1_3:67017576-67017595 Msa0135380:intron 35.0%
GAAATGAATCCGCCATTATT+TGG - chr1_3:67017588-67017607 None:intergenic 35.0%
GGATTCATTTCCAGAGTTAT+CGG + chr1_3:67017597-67017616 Msa0135380:intron 35.0%
GATTTAGGTGTTCTCAAAGA+TGG + chr1_3:67017743-67017762 Msa0135380:intron 35.0%
!! TGTTCTCAAAGATGGATTGA+TGG + chr1_3:67017751-67017770 Msa0135380:intron 35.0%
!! GATTGATGGCGTTGTTTAAA+GGG + chr1_3:67017765-67017784 Msa0135380:intron 35.0%
GATGATAAAGAACAAAGTGG+TGG + chr1_3:67017859-67017878 Msa0135380:intron 35.0%
TTGATTACAATCCTGTGTGT+AGG + chr1_3:67017906-67017925 Msa0135380:intron 35.0%
TTATAGATCAACCTACACAC+AGG - chr1_3:67017920-67017939 None:intergenic 35.0%
CATGAGGAGTAGTAATATTC+AGG + chr1_3:67018035-67018054 Msa0135380:intron 35.0%
CAATCTCTGTCTTACATAAC+TGG + chr1_3:67018234-67018253 Msa0135380:intron 35.0%
TGTCTTACATAACTGGTAGT+AGG + chr1_3:67018241-67018260 Msa0135380:intron 35.0%
CAAACCAAAATTCTTGGTCT+TGG - chr1_3:67018392-67018411 None:intergenic 35.0%
!!! CAAGACCAAGAATTTTGGTT+TGG + chr1_3:67018289-67018308 Msa0135380:intron 35.0%
TGTGACCAAACCAAAATTCT+TGG - chr1_3:67018386-67018405 None:intergenic 35.0%
TGTGACCAAACCAAAATTCT+TGG + chr1_3:67018386-67018405 Msa0135380:intron 35.0%
!!! CAAGACCAAGAATTTTGGTT+TGG - chr1_3:67018289-67018308 None:intergenic 35.0%
CAAACCAAAATTCTTGGTCT+TGG + chr1_3:67018392-67018411 Msa0135380:intron 35.0%
! ATGTATTGACATCTATGCAG+CGG + chr1_3:67018750-67018769 Msa0135380:intron 35.0%
! TTTACCATTTTACCCCTAAG+AGG + chr1_3:67019202-67019221 Msa0135380:intron 35.0%
! TTACCATTTTACCCCTAAGA+GGG + chr1_3:67019203-67019222 Msa0135380:intron 35.0%
TGAATGGAATGATCTTTGAC+CGG + chr1_3:67019550-67019569 Msa0135380:intron 35.0%
AAGTAACATTCAACAGCTTC+CGG - chr1_3:67019572-67019591 None:intergenic 35.0%
AATGTGTGTATATATTCGCG+AGG - chr1_3:67019905-67019924 None:intergenic 35.0%
GTCTGGAAGATTACATTGAA+AGG - chr1_3:67020191-67020210 None:intergenic 35.0%
AACTCTTTAGCATCTTGTGT+AGG - chr1_3:67020326-67020345 None:intergenic 35.0%
ATCCAAATATTTGTGGTGCA+TGG - chr1_3:67020600-67020619 None:intergenic 35.0%
GTGCCTATAATTCACATGAA+AGG + chr1_3:67020703-67020722 Msa0135380:intron 35.0%
GTATCCACGGGTATAATAAA+TGG + chr1_3:67021053-67021072 Msa0135380:intron 35.0%
ATACCCATTTATTATACCCG+TGG - chr1_3:67021060-67021079 None:intergenic 35.0%
TGATGTGAATGAAGTGGAAA+CGG - chr1_3:67021171-67021190 None:intergenic 35.0%
TATCATATTATCCGTACCCA+TGG + chr1_3:67021457-67021476 Msa0135380:intron 35.0%
ATCATATTATCCGTACCCAT+GGG + chr1_3:67021458-67021477 Msa0135380:intron 35.0%
CAAATGTCAATTGATACCCA+TGG - chr1_3:67021477-67021496 None:intergenic 35.0%
GTTTGTTTACCTGAAAGAAC+TGG + chr1_3:67021594-67021613 Msa0135380:intron 35.0%
!! AATCAGGTAGCTTTGGTAAT+AGG + chr1_3:67021702-67021721 Msa0135380:intron 35.0%
!! ATCAGGTAGCTTTGGTAATA+GGG + chr1_3:67021703-67021722 Msa0135380:intron 35.0%
CAGAACCCAAAATTCAATGA+AGG - chr1_3:67022212-67022231 None:intergenic 35.0%
!!! AATCAAGGGTTTTGTTCTTC+TGG - chr1_3:67022273-67022292 None:intergenic 35.0%
AGAAGAACAAAACCCTTGAT+TGG + chr1_3:67022272-67022291 Msa0135380:CDS 35.0%
! TTTTGGCACTGTAATCATGT+AGG - chr1_3:67022376-67022395 None:intergenic 35.0%
AGTTGTCAAAGAAGGAGTTA+TGG + chr1_3:67022409-67022428 Msa0135380:intron 35.0%
TGAAATCTCATTTCCATTGG+AGG + chr1_3:67022493-67022512 Msa0135380:intron 35.0%
TGTTGTTCATCACTATCCAA+TGG - chr1_3:67022789-67022808 None:intergenic 35.0%
TTGGATAGTGATGAACAACA+AGG + chr1_3:67022789-67022808 Msa0135380:intron 35.0%
!! AGGTGATGGATTAACATTCA+AGG + chr1_3:67022809-67022828 Msa0135380:intron 35.0%
!!! TGCAGAAGAAGAAGGTTTTT+TGG + chr1_3:67022880-67022899 Msa0135380:intron 35.0%
ACACTCTGCAAAGTATACAA+TGG - chr1_3:67023033-67023052 None:intergenic 35.0%
CAAGCGCATAGAAATTGTAT+CGG + chr1_3:67023087-67023106 Msa0135380:intron 35.0%
!! CAGAAGGTATCTCATACATT+CGG - chr1_3:67023551-67023570 None:intergenic 35.0%
ATGTGTAATATGTGAGCAGA+AGG - chr1_3:67023567-67023586 None:intergenic 35.0%
CAAAAACCAGTTTCTACCAA+GGG - chr1_3:67023655-67023674 None:intergenic 35.0%
ACAAAAACCAGTTTCTACCA+AGG - chr1_3:67023656-67023675 None:intergenic 35.0%
ACATCTGAGTTTGAATGAGT+TGG - chr1_3:67023726-67023745 None:intergenic 35.0%
! TCAAACTCAGATGTTTTCCT+TGG + chr1_3:67023732-67023751 Msa0135380:intron 35.0%
AATGTCAAATCCATCATCCA+AGG - chr1_3:67023752-67023771 None:intergenic 35.0%
CTCACATTAGATATGTGCTT+TGG - chr1_3:67023909-67023928 None:intergenic 35.0%
!! TGGGGTGATTTTGAAAATGT+CGG - chr1_3:67024112-67024131 None:intergenic 35.0%
AGGTAAACTCATTGTAAGTG+GGG - chr1_3:67024130-67024149 None:intergenic 35.0%
GAGAGTCCAAACAAGTAAAT+AGG - chr1_3:67024150-67024169 None:intergenic 35.0%
TGTGGATAGCAAGTAATCAA+AGG - chr1_3:67024334-67024353 None:intergenic 35.0%
! AAGTGAGTTACGATCAGTTT+TGG + chr1_3:67024378-67024397 Msa0135380:intron 35.0%
TTGTCATTATTCCAGCCAAA+AGG - chr1_3:67024459-67024478 None:intergenic 35.0%
GTCTTTGTGAGAAAGTTCTA+AGG + chr1_3:67024525-67024544 Msa0135380:intron 35.0%
AAGCTGTGTTTCAAGATAAG+AGG + chr1_3:67024853-67024872 Msa0135380:CDS 35.0%
AGCTGTGTTTCAAGATAAGA+GGG + chr1_3:67024854-67024873 Msa0135380:CDS 35.0%
! GTGAAACTCCTACAAGATTT+TGG + chr1_3:67024894-67024913 Msa0135380:CDS 35.0%
AATCATCATCCAATGGAAGT+GGG - chr1_3:67025031-67025050 None:intergenic 35.0%
AAATCATCATCCAATGGAAG+TGG - chr1_3:67025032-67025051 None:intergenic 35.0%
GATGTAAGAGTTGTCAAAGA+AGG + chr1_3:67025188-67025207 Msa0135380:CDS 35.0%
AGTTGTCAAAGAAGGAATGA+TGG + chr1_3:67025196-67025215 Msa0135380:CDS 35.0%
ACACAAAATCTCACTTCCAT+TGG + chr1_3:67025277-67025296 Msa0135380:CDS 35.0%
AAAATCTCACTTCCATTGGA+TGG + chr1_3:67025281-67025300 Msa0135380:CDS 35.0%
TATTGTTCATCACCATCCAA+TGG - chr1_3:67025296-67025315 None:intergenic 35.0%
! GGATTTTGTGAGTCATTGAC+AGG + chr1_3:67009615-67009634 Msa0135380:intron 40.0%
! GACAGGAAAGCATATTATGC+AGG + chr1_3:67009632-67009651 Msa0135380:intron 40.0%
ACAACACAGTAAGAGTTTGC+AGG - chr1_3:67009764-67009783 None:intergenic 40.0%
TGGTTATGAATTACGGTGAG+TGG - chr1_3:67009798-67009817 None:intergenic 40.0%
TACGCGACATGAGAAGAATT+TGG - chr1_3:67009865-67009884 None:intergenic 40.0%
! GAACTTAATGGGTGGAAGAA+AGG - chr1_3:67009999-67010018 None:intergenic 40.0%
GGAAACTGAAGGGAACTTAA+TGG - chr1_3:67010011-67010030 None:intergenic 40.0%
ATTCAATCATGGAGTCTGTG+GGG + chr1_3:67010089-67010108 Msa0135380:intron 40.0%
! ACACTTCTAAGAACCTCAGA+AGG + chr1_3:67010247-67010266 Msa0135380:intron 40.0%
! CACTTCTAAGAACCTCAGAA+GGG + chr1_3:67010248-67010267 Msa0135380:intron 40.0%
! ACTTCTAAGAACCTCAGAAG+GGG + chr1_3:67010249-67010268 Msa0135380:intron 40.0%
!! CACTAAGGTGCCATGTTTTT+CGG + chr1_3:67010669-67010688 Msa0135380:intron 40.0%
!! AGGAATACACTCTTTTGGGT+TGG - chr1_3:67010987-67011006 None:intergenic 40.0%
GAGTGTATATCGACCCAAAA+TGG + chr1_3:67011405-67011424 Msa0135380:intron 40.0%
TGAACTCTAGATCAACACTG+AGG + chr1_3:67011511-67011530 Msa0135380:intron 40.0%
TTTAGAGGTGACATGTAGGA+GGG - chr1_3:67011594-67011613 None:intergenic 40.0%
!! TTTTAGAGGTGACATGTAGG+AGG - chr1_3:67011595-67011614 None:intergenic 40.0%
TCTGGATCTTCTCATCTTGA+AGG - chr1_3:67012399-67012418 None:intergenic 40.0%
TCCAGAGTAAATGCCAAGAT+TGG + chr1_3:67012413-67012432 Msa0135380:CDS 40.0%
ACCAATCTTGGCATTTACTC+TGG - chr1_3:67012417-67012436 None:intergenic 40.0%
GATACAGAAGCTGTGAAAGA+AGG + chr1_3:67012548-67012567 Msa0135380:intron 40.0%
AGCTGTGAAAGAAGGAGTTA+TGG + chr1_3:67012556-67012575 Msa0135380:intron 40.0%
GATGATCAACAACAAGGTGA+TGG + chr1_3:67012662-67012681 Msa0135380:intron 40.0%
GATGATGAACTTCAAGGTGA+TGG + chr1_3:67012710-67012729 Msa0135380:intron 40.0%
!! TGAACTTCAAGGTGATGGAT+TGG + chr1_3:67012715-67012734 Msa0135380:intron 40.0%
!! ACTTGCTGTATAGACACTAC+TGG - chr1_3:67012986-67013005 None:intergenic 40.0%
ACTGAATAGGATTCTGCTTC+TGG - chr1_3:67013139-67013158 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - chr1_3:67013428-67013447 None:intergenic 40.0%
!!! CCATTGTGGGTATTTTTTGC+AGG - chr1_3:67013750-67013769 None:intergenic 40.0%
CCTGCAAAAAATACCCACAA+TGG + chr1_3:67013747-67013766 Msa0135380:intron 40.0%
! GGTTTTACCCTATCCATTGT+GGG - chr1_3:67013763-67013782 None:intergenic 40.0%
!! AAACCCCGCTTTTATAGGTA+TGG + chr1_3:67013778-67013797 Msa0135380:intron 40.0%
!! AACCCCGCTTTTATAGGTAT+GGG + chr1_3:67013779-67013798 Msa0135380:intron 40.0%
AAGCCCATACCTATAAAAGC+GGG - chr1_3:67013785-67013804 None:intergenic 40.0%
CAAGCCCATACCTATAAAAG+CGG - chr1_3:67013786-67013805 None:intergenic 40.0%
! GCTTTTATAGGTATGGGCTT+GGG + chr1_3:67013785-67013804 Msa0135380:intron 40.0%
AAATTTGCGGGTAATTACCC+GGG - chr1_3:67013811-67013830 None:intergenic 40.0%
CCATACCCATCTAAATTTGC+GGG - chr1_3:67013823-67013842 None:intergenic 40.0%
CCCATACCCATCTAAATTTG+CGG - chr1_3:67013824-67013843 None:intergenic 40.0%
CCGCAAATTTAGATGGGTAT+GGG + chr1_3:67013821-67013840 Msa0135380:intron 40.0%
AATTTAGATGGGTATGGGTG+CGG + chr1_3:67013826-67013845 Msa0135380:intron 40.0%
! AAATATGTATATGCGGGCTG+CGG - chr1_3:67013876-67013895 None:intergenic 40.0%
!! ACTGATTTGCCCATAGAGTA+TGG + chr1_3:67014274-67014293 Msa0135380:intron 40.0%
TGTCCTTCTCCATACTCTAT+GGG - chr1_3:67014286-67014305 None:intergenic 40.0%
TATCATCTAGGGATGGCAAT+GGG - chr1_3:67014406-67014425 None:intergenic 40.0%
ATATCATCTAGGGATGGCAA+TGG - chr1_3:67014407-67014426 None:intergenic 40.0%
ATCATGCACTATGCAGGTTA+AGG + chr1_3:67014446-67014465 Msa0135380:intron 40.0%
TGACAACCACAATATTGTGG+GGG + chr1_3:67014686-67014705 Msa0135380:intron 40.0%
ATCAACATGTGTGAATGCCT+TGG - chr1_3:67015107-67015126 None:intergenic 40.0%
GCAACATTGTCAAAGTTAGG+GGG - chr1_3:67016650-67016669 None:intergenic 40.0%
CGCAACATTGTCAAAGTTAG+GGG - chr1_3:67016649-67016668 None:intergenic 40.0%
GCAAAGGGGCTAAAACATAA+GGG - chr1_3:67016590-67016609 None:intergenic 40.0%
TGCAAAGGGGCTAAAACATA+AGG - chr1_3:67016589-67016608 None:intergenic 40.0%
CCCGGTCAAAATTGATCAAA+AGG - chr1_3:67015403-67015422 None:intergenic 40.0%
TTGTGATGATTCTGGACACA+TGG - chr1_3:67015850-67015869 None:intergenic 40.0%
TAGGTGAGTTGTGATGATTC+TGG - chr1_3:67015858-67015877 None:intergenic 40.0%
GAGGGTTAATACGGTTAGAA+CGG - chr1_3:67015950-67015969 None:intergenic 40.0%
GATGAACACGAGGGTTAATA+CGG - chr1_3:67015959-67015978 None:intergenic 40.0%
TGAAAAGAGGATGAACACGA+GGG - chr1_3:67015968-67015987 None:intergenic 40.0%
TTGAAAAGAGGATGAACACG+AGG - chr1_3:67015969-67015988 None:intergenic 40.0%
! TTCTTCTAGGAAGAGACGTA+AGG - chr1_3:67016046-67016065 None:intergenic 40.0%
AGAATTACGAACCTCATCGT+CGG + chr1_3:67016062-67016081 Msa0135380:intron 40.0%
GAACGAATCGAATGAGTTGT+TGG + chr1_3:67016157-67016176 Msa0135380:intron 40.0%
! TCGAATGAGTTGTTGGTGTT+TGG + chr1_3:67016164-67016183 Msa0135380:intron 40.0%
TTGAACGAAGATGGATCTGA+TGG + chr1_3:67016208-67016227 Msa0135380:intron 40.0%
TGAACGAAGATGGATCTGAT+GGG + chr1_3:67016209-67016228 Msa0135380:intron 40.0%
!! ATGATGGTGATGGGAAAAAC+GGG + chr1_3:67016269-67016288 Msa0135380:intron 40.0%
! CTGGGTTTGGATGAATTTTG+TGG + chr1_3:67016334-67016353 Msa0135380:intron 40.0%
!! TGGGTTTTGTGGATGAATTC+TGG + chr1_3:67016354-67016373 Msa0135380:intron 40.0%
CTTGGTCAAAATCGACCAAA+AGG + chr1_3:67016559-67016578 Msa0135380:intron 40.0%
TGCAAAGGGGCTAAAACATA+AGG + chr1_3:67016589-67016608 Msa0135380:intron 40.0%
GCAAAGGGGCTAAAACATAA+GGG + chr1_3:67016590-67016609 Msa0135380:intron 40.0%
CGCAACATTGTCAAAGTTAG+GGG + chr1_3:67016649-67016668 Msa0135380:intron 40.0%
GCAACATTGTCAAAGTTAGG+GGG + chr1_3:67016650-67016669 Msa0135380:intron 40.0%
TACGATAGAATAGGTCTGGT+CGG - chr1_3:67016849-67016868 None:intergenic 40.0%
! GTTGTATTGGTCCTGTTTGT+GGG - chr1_3:67017133-67017152 None:intergenic 40.0%
! AGTTGTATTGGTCCTGTTTG+TGG - chr1_3:67017134-67017153 None:intergenic 40.0%
TACGCACAACACAGTTGTAT+TGG - chr1_3:67017146-67017165 None:intergenic 40.0%
TACATGAGTTAACTCACGCT+GGG + chr1_3:67017276-67017295 Msa0135380:intron 40.0%
TACATGAGTTAACTCACGCT+GGG + chr1_3:67017276-67017295 Msa0135380:intron 40.0%
CAGCATGAGTTAACTCATGT+AGG - chr1_3:67017339-67017358 None:intergenic 40.0%
! TATCTATTTGGTGACAAGCC+GGG - chr1_3:67017465-67017484 None:intergenic 40.0%
CCGCCATTATTTGGATTTGT+AGG - chr1_3:67017579-67017598 None:intergenic 40.0%
ATTTCCAGAGTTATCGGAGA+AGG + chr1_3:67017603-67017622 Msa0135380:intron 40.0%
ATTACCTTCTCCGATAACTC+TGG - chr1_3:67017610-67017629 None:intergenic 40.0%
AGAGTTATCGGAGAAGGTAA+TGG + chr1_3:67017609-67017628 Msa0135380:intron 40.0%
!! TTATCGGAGAAGGTAATGGA+AGG + chr1_3:67017613-67017632 Msa0135380:CDS 40.0%
!! TATCGGAGAAGGTAATGGAA+GGG + chr1_3:67017614-67017633 Msa0135380:CDS 40.0%
AACATGTGTTTCATGATGCG+AGG + chr1_3:67017661-67017680 Msa0135380:intron 40.0%
ACATGTGTTTCATGATGCGA+GGG + chr1_3:67017662-67017681 Msa0135380:intron 40.0%
!! GGATTGATGGCGTTGTTTAA+AGG + chr1_3:67017764-67017783 Msa0135380:intron 40.0%
CATCATCATCCAATGGAAGT+GGG - chr1_3:67017843-67017862 None:intergenic 40.0%
TCATCATCATCCAATGGAAG+TGG - chr1_3:67017844-67017863 None:intergenic 40.0%
! AAAGAACAAAGTGGTGGTGA+TGG + chr1_3:67017865-67017884 Msa0135380:intron 40.0%
AATAGACACATAAGACGGAG+AGG - chr1_3:67018081-67018100 None:intergenic 40.0%
! TGGACCAAGACCAAGAATTT+TGG + chr1_3:67018284-67018303 Msa0135380:intron 40.0%
GAAAGAAGAGAAGAGAGAGA+AGG + chr1_3:67018348-67018367 Msa0135380:intron 40.0%
! TGGACCAAGACCAAGAATTT+TGG - chr1_3:67018284-67018303 None:intergenic 40.0%
CTCAAACCGATCATATTTGC+AGG - chr1_3:67018457-67018476 None:intergenic 40.0%
TGCATGCTTTGTGGGATATA+TGG + chr1_3:67018975-67018994 Msa0135380:intron 40.0%
TGCGCCTCAATTTACGTATT+TGG + chr1_3:67019039-67019058 Msa0135380:intron 40.0%
! TACCATTTTACCCCTAAGAG+GGG + chr1_3:67019204-67019223 Msa0135380:intron 40.0%
TTACCAAAATGCCCCTCTTA+GGG - chr1_3:67019218-67019237 None:intergenic 40.0%
TTTACCAAAATGCCCCTCTT+AGG - chr1_3:67019219-67019238 None:intergenic 40.0%
AAATTGGTCAGGGGCAAAAA+TGG - chr1_3:67019284-67019303 None:intergenic 40.0%
AGAAGCAACTGAATTTGGGA+GGG - chr1_3:67019390-67019409 None:intergenic 40.0%
TAGAAGCAACTGAATTTGGG+AGG - chr1_3:67019391-67019410 None:intergenic 40.0%
! TTGCTTCTACATTGCTGTTG+TGG + chr1_3:67019402-67019421 Msa0135380:intron 40.0%
! TGCTTCTACATTGCTGTTGT+GGG + chr1_3:67019403-67019422 Msa0135380:intron 40.0%
! ATTGCTGTTGTGGGAGATTA+AGG + chr1_3:67019412-67019431 Msa0135380:intron 40.0%
ATATTCGCGAGGTTGAAGAA+AGG - chr1_3:67019894-67019913 None:intergenic 40.0%
TAGCATCTTGTGTAGGAACT+TGG - chr1_3:67020319-67020338 None:intergenic 40.0%
TATTTGTGGTGCATGGTCTA+AGG - chr1_3:67020593-67020612 None:intergenic 40.0%
GACCATGCACCACAAATATT+TGG + chr1_3:67020595-67020614 Msa0135380:intron 40.0%
! CAGAAGTTTGTTCACCTGAA+AGG + chr1_3:67020853-67020872 Msa0135380:intron 40.0%
AGTTAATATCTGCCTTCGCT+AGG + chr1_3:67020955-67020974 Msa0135380:intron 40.0%
GTTAATATCTGCCTTCGCTA+GGG + chr1_3:67020956-67020975 Msa0135380:intron 40.0%
TTAATATCTGCCTTCGCTAG+GGG + chr1_3:67020957-67020976 Msa0135380:intron 40.0%
ATCATATTTATCCAACGGGG+CGG + chr1_3:67021427-67021446 Msa0135380:intron 40.0%
TCAATTGATACCCATGGGTA+CGG - chr1_3:67021471-67021490 None:intergenic 40.0%
TCCATTGCATCACCAATCAA+GGG - chr1_3:67022287-67022306 None:intergenic 40.0%
AATGAGATTTCATGTCCTGG+TGG - chr1_3:67022485-67022504 None:intergenic 40.0%
GGAAATGAGATTTCATGTCC+TGG - chr1_3:67022488-67022507 None:intergenic 40.0%
GATGATCAACAACGATGTGA+TGG + chr1_3:67022515-67022534 Msa0135380:intron 40.0%
ATTGCTTCATCTATGAGTGC+TGG - chr1_3:67022564-67022583 None:intergenic 40.0%
ACACGAAATCTCACTTCCAT+TGG + chr1_3:67022770-67022789 Msa0135380:intron 40.0%
AGTGATGAACAACAAGGTGA+TGG + chr1_3:67022795-67022814 Msa0135380:intron 40.0%
ATCGTGTATGCAGAAGAAGA+AGG + chr1_3:67022872-67022891 Msa0135380:intron 40.0%
! GGTCCTTTTTGCTCTTTTCT+TGG + chr1_3:67022901-67022920 Msa0135380:intron 40.0%
!! CTTCTTGTTGTTGAACCCAT+TGG + chr1_3:67023677-67023696 Msa0135380:intron 40.0%
! CAGATGTTTTCCTTGGATGA+TGG + chr1_3:67023739-67023758 Msa0135380:intron 40.0%
TAGAATGTTGAGTGAAGGTG+TGG - chr1_3:67024352-67024371 None:intergenic 40.0%
CCAACTAGAATGTTGAGTGA+AGG - chr1_3:67024357-67024376 None:intergenic 40.0%
CCTTCACTCAACATTCTAGT+TGG + chr1_3:67024354-67024373 Msa0135380:intron 40.0%
! CAAGTTGAAAACTCTGAGCA+AGG + chr1_3:67024576-67024595 Msa0135380:intron 40.0%
GAGAGTGAGCACAAGAAAAT+TGG - chr1_3:67024605-67024624 None:intergenic 40.0%
CTTGAGCTGTTCATCTTGAA+GGG - chr1_3:67024783-67024802 None:intergenic 40.0%
TCTTGAGCTGTTCATCTTGA+AGG - chr1_3:67024784-67024803 None:intergenic 40.0%
ATGAACAGCTCAAGAAGAAC+AGG + chr1_3:67024789-67024808 Msa0135380:CDS 40.0%
! TTTTGGCGCCAAAATCTTGT+AGG - chr1_3:67024905-67024924 None:intergenic 40.0%
GATAGAAGAGTCGTCAAAGA+AGG + chr1_3:67024930-67024949 Msa0135380:CDS 40.0%
AGTCGTCAAAGAAGGAGTTA+TGG + chr1_3:67024938-67024957 Msa0135380:CDS 40.0%
ACATGAAATCCCACTTCCAT+TGG + chr1_3:67025019-67025038 Msa0135380:CDS 40.0%
CAATTTGCATTGTGTGCACC+AGG - chr1_3:67009734-67009753 None:intergenic 45.0%
!! CCTTCCTCCTCCATTTTTGA+CGG + chr1_3:67009948-67009967 Msa0135380:intron 45.0%
!! CTTCCTCCTCCATTTTTGAC+GGG + chr1_3:67009949-67009968 Msa0135380:intron 45.0%
ACTGAAGGGAACTTAATGGG+TGG - chr1_3:67010007-67010026 None:intergenic 45.0%
TTCAATCATGGAGTCTGTGG+GGG + chr1_3:67010090-67010109 Msa0135380:intron 45.0%
!!! AGTTTGTGCGGTTTTGAGGA+AGG + chr1_3:67010149-67010168 Msa0135380:intron 45.0%
ACTAACAAGCACCCTGCATA+CGG + chr1_3:67010416-67010435 Msa0135380:intron 45.0%
CAAGACCAAGACTGTCACTA+AGG + chr1_3:67010654-67010673 Msa0135380:intron 45.0%
ACTCTAGATCAACACTGAGG+TGG + chr1_3:67011514-67011533 Msa0135380:intron 45.0%
GTCATTATTCCTGGGAGTTG+AGG - chr1_3:67011548-67011567 None:intergenic 45.0%
TGCTTCAGCTTCACCAATCT+TGG - chr1_3:67012429-67012448 None:intergenic 45.0%
TTCAACATCTTCATGCCACC+AGG + chr1_3:67012614-67012633 Msa0135380:intron 45.0%
AGTGAGATTTCATGTCCTGG+TGG - chr1_3:67012632-67012651 None:intergenic 45.0%
GGAAGTGAGATTTCATGTCC+TGG - chr1_3:67012635-67012654 None:intergenic 45.0%
!!! GACGCTCATTTTGAAACGGA+GGG + chr1_3:67013565-67013584 Msa0135380:intron 45.0%
TAGGGATGACAATTAGACCC+AGG + chr1_3:67013713-67013732 Msa0135380:intron 45.0%
ACAATTAGACCCAGGCTTGA+TGG + chr1_3:67013721-67013740 Msa0135380:intron 45.0%
CAATTAGACCCAGGCTTGAT+GGG + chr1_3:67013722-67013741 Msa0135380:intron 45.0%
! GGGTTTTACCCTATCCATTG+TGG - chr1_3:67013764-67013783 None:intergenic 45.0%
!! GGGTAAAACCCCGCTTTTAT+AGG + chr1_3:67013773-67013792 Msa0135380:intron 45.0%
AGCCCATACCTATAAAAGCG+GGG - chr1_3:67013784-67013803 None:intergenic 45.0%
! CGCTTTTATAGGTATGGGCT+TGG + chr1_3:67013784-67013803 Msa0135380:intron 45.0%
CCCGCAAATTTAGATGGGTA+TGG + chr1_3:67013820-67013839 Msa0135380:intron 45.0%
ATTTAGATGGGTATGGGTGC+GGG + chr1_3:67013827-67013846 Msa0135380:intron 45.0%
! AATATGTATATGCGGGCTGC+GGG - chr1_3:67013875-67013894 None:intergenic 45.0%
TTGCCCATAGAGTATGGAGA+AGG + chr1_3:67014280-67014299 Msa0135380:intron 45.0%
GTGTCCTTCTCCATACTCTA+TGG - chr1_3:67014287-67014306 None:intergenic 45.0%
! CACTTAAGTTGTTACCCACG+AGG + chr1_3:67014304-67014323 Msa0135380:intron 45.0%
AGTTGTTACCCACGAGGATA+CGG + chr1_3:67014310-67014329 Msa0135380:intron 45.0%
CACTCTATCATGCACTATGC+AGG + chr1_3:67014440-67014459 Msa0135380:intron 45.0%
!! GTTTTGACCCTGAGGTTTCT+AGG + chr1_3:67014518-67014537 Msa0135380:intron 45.0%
! TTTCGTCCTTCTAGAGAGAG+AGG - chr1_3:67015795-67015814 None:intergenic 45.0%
AGGACGAAAACAGAGCAGAA+AGG + chr1_3:67015806-67015825 Msa0135380:intron 45.0%
TGATGATTCTGGACACATGG+TGG - chr1_3:67015847-67015866 None:intergenic 45.0%
! TAAAGGATCGATTCCACGGT+AGG - chr1_3:67015877-67015896 None:intergenic 45.0%
! GGAGTAAAGGATCGATTCCA+CGG - chr1_3:67015881-67015900 None:intergenic 45.0%
ATTGTTGTGGCGGTTGGAAT+GGG - chr1_3:67015910-67015929 None:intergenic 45.0%
GGTTAATACGGTTAGAACGG+CGG - chr1_3:67015947-67015966 None:intergenic 45.0%
TAATCCTAAAAACACCGCCG+TGG - chr1_3:67016106-67016125 None:intergenic 45.0%
!!! ACGGCGGTGTTTTTAGGATT+AGG + chr1_3:67016105-67016124 Msa0135380:intron 45.0%
GGATCTGATGGGAAGAAGAA+TGG + chr1_3:67016220-67016239 Msa0135380:intron 45.0%
GGCGGTGGTTTAAAGAATGA+TGG + chr1_3:67016253-67016272 Msa0135380:intron 45.0%
CAGCGTGAGTTAACTCATGT+AGG - chr1_3:67017277-67017296 None:intergenic 45.0%
CTACATGAGTTAACTCACGC+TGG + chr1_3:67017275-67017294 Msa0135380:intron 45.0%
CAGCGTGAGTTAACTCATGT+AGG - chr1_3:67017277-67017296 None:intergenic 45.0%
CTACATGAGTTAACTCACGC+TGG + chr1_3:67017275-67017294 Msa0135380:intron 45.0%
! AAAAGGAAGGAAGGTTGGCT+AGG + chr1_3:67017484-67017503 Msa0135380:intron 45.0%
! AAAGGAAGGAAGGTTGGCTA+GGG + chr1_3:67017485-67017504 Msa0135380:intron 45.0%
! TCAACACCTTTTTGCCACCA+TGG + chr1_3:67017810-67017829 Msa0135380:intron 45.0%
! CAACACCTTTTTGCCACCAT+GGG + chr1_3:67017811-67017830 Msa0135380:intron 45.0%
TTTCTCCCATGGTGGCAAAA+AGG - chr1_3:67017819-67017838 None:intergenic 45.0%
TGACCTGAGAAACACTTGTG+TGG - chr1_3:67018419-67018438 None:intergenic 45.0%
TTGGCATCATCCGTTCTATG+TGG + chr1_3:67018576-67018595 Msa0135380:intron 45.0%
TACCAAAATGCCCCTCTTAG+GGG - chr1_3:67019217-67019236 None:intergenic 45.0%
! ACCTCTTTTCAACTCACGCT+GGG + chr1_3:67019627-67019646 Msa0135380:intron 45.0%
GCAAAAATACCCATGCCCAT+GGG + chr1_3:67020982-67021001 Msa0135380:intron 45.0%
GGTAGCTAAACAGGTATCCA+CGG + chr1_3:67021040-67021059 Msa0135380:intron 45.0%
GTAGCTAAACAGGTATCCAC+GGG + chr1_3:67021041-67021060 Msa0135380:intron 45.0%
!! GTGGGTATTGAGGTATCCAT+GGG - chr1_3:67021359-67021378 None:intergenic 45.0%
CATGGATACCTCAATACCCA+CGG + chr1_3:67021358-67021377 Msa0135380:intron 45.0%
ATGGATACCTCAATACCCAC+GGG + chr1_3:67021359-67021378 Msa0135380:intron 45.0%
TCATATTTATCCAACGGGGC+GGG + chr1_3:67021428-67021447 Msa0135380:intron 45.0%
! TCTGGAGCTGTTCATCTTGA+AGG - chr1_3:67022255-67022274 None:intergenic 45.0%
!! ACCCTTGATTGGTGATGCAA+TGG + chr1_3:67022283-67022302 Msa0135380:CDS 45.0%
CTCCATTGCATCACCAATCA+AGG - chr1_3:67022288-67022307 None:intergenic 45.0%
TTCAACATCTTCTTGCCACC+AGG + chr1_3:67022467-67022486 Msa0135380:intron 45.0%
CGTTGTTGATCATCCTCCAA+TGG - chr1_3:67022509-67022528 None:intergenic 45.0%
GATCAGTGCATCCTCAAAGA+TGG + chr1_3:67022537-67022556 Msa0135380:intron 45.0%
ACTCAACACTTTCTTGCCAG+CGG + chr1_3:67022746-67022765 Msa0135380:intron 45.0%
TTTGGACTCTCACATTCGCA+TGG + chr1_3:67024159-67024178 Msa0135380:intron 45.0%
TCCCTTGATTGACGATGCAA+GGG + chr1_3:67024812-67024831 Msa0135380:CDS 45.0%
ACCCTTGCATCGTCAATCAA+GGG - chr1_3:67024816-67024835 None:intergenic 45.0%
!! CGATGCAAGGGTGTTTGTAA+AGG + chr1_3:67024824-67024843 Msa0135380:CDS 45.0%
TTCAACATCTTCTTGCCACC+AGG + chr1_3:67022467-67022486 Msa0135380:intron 45.0%
! TTTTGGCACGGTAATCAGCT+AGG - chr1_3:67025163-67025182 None:intergenic 45.0%
ATTCAACACCTTCTTGCCAG+AGG + chr1_3:67025253-67025272 Msa0135380:CDS 45.0%
TTCAACACCTTCTTGCCAGA+GGG + chr1_3:67025254-67025273 Msa0135380:CDS 45.0%
! AGTGAGATTTTGTGTCCCTC+TGG - chr1_3:67025272-67025291 None:intergenic 45.0%
!! ATGTTATTATAAAATATAAA+TGG - chr1_3:67014806-67014825 None:intergenic 5.0%
!!! TTTTTAATTTTTTTTAATAG+GGG - chr1_3:67016618-67016637 None:intergenic 5.0%
!! AATTAAAAAAAAAATAGAAA+AGG + chr1_3:67015497-67015516 Msa0135380:intron 5.0%
!! ATAAAATAAAAAATAGAAAA+GGG - chr1_3:67016428-67016447 None:intergenic 5.0%
!! AATAAAATAAAAAATAGAAA+AGG - chr1_3:67016429-67016448 None:intergenic 5.0%
!!! TTTTTAATTTTTTTTAATAG+GGG + chr1_3:67016618-67016637 Msa0135380:intron 5.0%
!! TAGAAAATAATTAAAAAAAT+TGG - chr1_3:67019300-67019319 None:intergenic 5.0%
!! ATAGTTAAAAATATAAAAAT+TGG - chr1_3:67019356-67019375 None:intergenic 5.0%
!! AATATTAAAAAATAAAGAAA+AGG - chr1_3:67019655-67019674 None:intergenic 5.0%
!! TAAAAAAAATAAAGTTAAAT+AGG - chr1_3:67019699-67019718 None:intergenic 5.0%
!!! GTTTTTAAAAATATAAAAAT+TGG - chr1_3:67020044-67020063 None:intergenic 5.0%
!!! TTTTAAAAAACTTATTTTAA+AGG - chr1_3:67020683-67020702 None:intergenic 5.0%
!!! TTTTGAATTTATTTATTTTT+TGG - chr1_3:67021325-67021344 None:intergenic 5.0%
ATTCCTATCGGCACGCTGTA+CGG - chr1_3:67009902-67009921 None:intergenic 50.0%
CCGTCAAAAATGGAGGAGGA+AGG - chr1_3:67009951-67009970 None:intergenic 50.0%
TCAGCACTGCCCGTCAAAAA+TGG - chr1_3:67009961-67009980 None:intergenic 50.0%
TCAATCATGGAGTCTGTGGG+GGG + chr1_3:67010091-67010110 Msa0135380:intron 50.0%
CAGCTCTATTACCCCTTCTG+AGG - chr1_3:67010263-67010282 None:intergenic 50.0%
CTAACAAGCACCCTGCATAC+GGG + chr1_3:67010417-67010436 Msa0135380:intron 50.0%
TAACAAGCACCCTGCATACG+GGG + chr1_3:67010418-67010437 Msa0135380:intron 50.0%
TAACGAGTACCCCGTATGCA+GGG - chr1_3:67010430-67010449 None:intergenic 50.0%
ATAACGAGTACCCCGTATGC+AGG - chr1_3:67010431-67010450 None:intergenic 50.0%
TGGCACCTTAGTGACAGTCT+TGG - chr1_3:67010662-67010681 None:intergenic 50.0%
! TGAGCTTAGCTCGGTTGGTA+GGG - chr1_3:67011268-67011287 None:intergenic 50.0%
TTGTCCTCGTGAGCTTAGCT+CGG - chr1_3:67011277-67011296 None:intergenic 50.0%
GTTCATGTACCTCAACTCCC+AGG + chr1_3:67011536-67011555 Msa0135380:intron 50.0%
GACATGTAGGAGGGTCGAAA+GGG - chr1_3:67011585-67011604 None:intergenic 50.0%
TGACATGTAGGAGGGTCGAA+AGG - chr1_3:67011586-67011605 None:intergenic 50.0%
TCGGCTGTTCTGATACCTAC+AGG + chr1_3:67013181-67013200 Msa0135380:intron 50.0%
!!! CGACGCTCATTTTGAAACGG+AGG + chr1_3:67013564-67013583 Msa0135380:intron 50.0%
! ATATGTATATGCGGGCTGCG+GGG - chr1_3:67013874-67013893 None:intergenic 50.0%
!! CAAAGTGCGGGTAATGGGTA+CGG + chr1_3:67014243-67014262 Msa0135380:intron 50.0%
!! AAAGTGCGGGTAATGGGTAC+GGG + chr1_3:67014244-67014263 Msa0135380:intron 50.0%
GTTGTTACCCACGAGGATAC+GGG + chr1_3:67014311-67014330 Msa0135380:intron 50.0%
TACAAACGCGGGTATGGGAA+AGG + chr1_3:67014353-67014372 Msa0135380:intron 50.0%
ACAAACGCGGGTATGGGAAA+GGG + chr1_3:67014354-67014373 Msa0135380:intron 50.0%
CAATGGGTACCCAATGGGTA+GGG - chr1_3:67014390-67014409 None:intergenic 50.0%
GATGGCAATGGGTACCCAAT+GGG - chr1_3:67014395-67014414 None:intergenic 50.0%
!! ACCCTGAGGTTTCTAGGACA+AGG + chr1_3:67014524-67014543 Msa0135380:intron 50.0%
CCCTTGTCCTAGAAACCTCA+GGG - chr1_3:67014528-67014547 None:intergenic 50.0%
!! CCCTGAGGTTTCTAGGACAA+GGG + chr1_3:67014525-67014544 Msa0135380:intron 50.0%
!! CCTGAGGTTTCTAGGACAAG+GGG + chr1_3:67014526-67014545 Msa0135380:intron 50.0%
!! CTGAGGTTTCTAGGACAAGG+GGG + chr1_3:67014527-67014546 Msa0135380:intron 50.0%
TCGAACTCGGCATTGCAATG+CGG + chr1_3:67014575-67014594 Msa0135380:intron 50.0%
TGCAGACCCCCACAATATTG+TGG - chr1_3:67014695-67014714 None:intergenic 50.0%
GCTTCTGCTGTGACAGCTAA+AGG + chr1_3:67014888-67014907 Msa0135380:intron 50.0%
ACGTGAGGAGAAGAAGGGAT+TGG + chr1_3:67015539-67015558 Msa0135380:intron 50.0%
! CCTTCTAGAGAGAGAGGATG+TGG - chr1_3:67015789-67015808 None:intergenic 50.0%
CCACATCCTCTCTCTCTAGA+AGG + chr1_3:67015786-67015805 Msa0135380:intron 50.0%
TCATCACAACTCACCTACCG+TGG + chr1_3:67015861-67015880 Msa0135380:intron 50.0%
GAATGGGAGGAGTGGAGTAA+AGG - chr1_3:67015894-67015913 None:intergenic 50.0%
GATTGTTGTGGCGGTTGGAA+TGG - chr1_3:67015911-67015930 None:intergenic 50.0%
AGAGAGGGAGATTGTTGTGG+CGG - chr1_3:67015920-67015939 None:intergenic 50.0%
GACAGAGAGGGAGATTGTTG+TGG - chr1_3:67015923-67015942 None:intergenic 50.0%
AAAAACACCGCCGTGGATGA+CGG - chr1_3:67016099-67016118 None:intergenic 50.0%
! TCATCCACGGCGGTGTTTTT+AGG + chr1_3:67016099-67016118 Msa0135380:intron 50.0%
GATGGGAAGAAGAATGGCAG+CGG + chr1_3:67016226-67016245 Msa0135380:intron 50.0%
AAGAAGAATGGCAGCGGTGA+TGG + chr1_3:67016232-67016251 Msa0135380:intron 50.0%
TGACCAAGTCAACGCCTAAG+TGG - chr1_3:67016547-67016566 None:intergenic 50.0%
! AACTCACGCAGCGGGTATTT+TGG + chr1_3:67017379-67017398 Msa0135380:intron 50.0%
TGTATGGGAGTGAGCGTCTT+AGG + chr1_3:67017408-67017427 Msa0135380:intron 50.0%
AAATGTTTCGCGTGAGCCTG+AGG + chr1_3:67017531-67017550 Msa0135380:intron 50.0%
!! AGAAGGTAATGGAAGGGCAG+TGG + chr1_3:67017620-67017639 Msa0135380:CDS 50.0%
CGTTATGGTACGGTAGCCAT+TGG - chr1_3:67017715-67017734 None:intergenic 50.0%
AAGTGGGATTTCTCCCATGG+TGG - chr1_3:67017827-67017846 None:intergenic 50.0%
TGGAAGTGGGATTTCTCCCA+TGG - chr1_3:67017830-67017849 None:intergenic 50.0%
GGGAGAAATCCCACTTCCAT+TGG + chr1_3:67017831-67017850 Msa0135380:intron 50.0%
GGTCCACACAAGTGTTTCTC+AGG + chr1_3:67018413-67018432 Msa0135380:intron 50.0%
TGCCCCTCTTAGGGGTAAAA+TGG - chr1_3:67019209-67019228 None:intergenic 50.0%
!!! TACCCCTAAGAGGGGCATTT+TGG + chr1_3:67019212-67019231 Msa0135380:intron 50.0%
! CACCTCTTTTCAACTCACGC+TGG + chr1_3:67019626-67019645 Msa0135380:intron 50.0%
! TCCCAGCGTGAGTTGAAAAG+AGG - chr1_3:67019631-67019650 None:intergenic 50.0%
! TGGTGCATGGTCTAAGGCAT+GGG - chr1_3:67020587-67020606 None:intergenic 50.0%
! ATTTTTGCCACCCCTAGCGA+AGG - chr1_3:67020970-67020989 None:intergenic 50.0%
GGCAAAAATACCCATGCCCA+TGG + chr1_3:67020981-67021000 Msa0135380:intron 50.0%
! TTTTACCCACGGGTACCCAT+GGG - chr1_3:67021000-67021019 None:intergenic 50.0%
! ATTTTACCCACGGGTACCCA+TGG - chr1_3:67021001-67021020 None:intergenic 50.0%
GGTAAAATCCGTCACGGGTA+TGG + chr1_3:67021013-67021032 Msa0135380:intron 50.0%
TATGGAGCGGGTAGCTAAAC+AGG + chr1_3:67021031-67021050 Msa0135380:intron 50.0%
CAAAACTCCATGGGTACCCA+TGG + chr1_3:67021340-67021359 Msa0135380:intron 50.0%
!! CGTGGGTATTGAGGTATCCA+TGG - chr1_3:67021360-67021379 None:intergenic 50.0%
CATATTTATCCAACGGGGCG+GGG + chr1_3:67021429-67021448 Msa0135380:intron 50.0%
TTACAAACCCGTGCTTCGCA+CGG - chr1_3:67021954-67021973 None:intergenic 50.0%
!! TGAGTGCTGGTCCATCTTTG+AGG - chr1_3:67022551-67022570 None:intergenic 50.0%
CTCAACACTTTCTTGCCAGC+GGG + chr1_3:67022747-67022766 Msa0135380:intron 50.0%
ACTTCTTTCACGTGCTCCCT+TGG + chr1_3:67023636-67023655 Msa0135380:intron 50.0%
GTCCCTTGATTGACGATGCA+AGG + chr1_3:67024811-67024830 Msa0135380:CDS 50.0%
CACCCTTGCATCGTCAATCA+AGG - chr1_3:67024817-67024836 None:intergenic 50.0%
AGTGGGATTTCATGTCCTGG+TGG - chr1_3:67025014-67025033 None:intergenic 50.0%
GGAAGTGGGATTTCATGTCC+TGG - chr1_3:67025017-67025036 None:intergenic 50.0%
TTTGTGTCCCTCTGGCAAGA+AGG - chr1_3:67025264-67025283 None:intergenic 50.0%
TTCCTATCGGCACGCTGTAC+GGG - chr1_3:67009901-67009920 None:intergenic 55.0%
CTGCCCGTCAAAAATGGAGG+AGG - chr1_3:67009955-67009974 None:intergenic 55.0%
GCACTGCCCGTCAAAAATGG+AGG - chr1_3:67009958-67009977 None:intergenic 55.0%
GTGAGCTTAGCTCGGTTGGT+AGG - chr1_3:67011269-67011288 None:intergenic 55.0%
TATAGGTATGGGCTTGGGCC+CGG + chr1_3:67013790-67013809 Msa0135380:intron 55.0%
GCAATGGGTACCCAATGGGT+AGG - chr1_3:67014391-67014410 None:intergenic 55.0%
GGATGGCAATGGGTACCCAA+TGG - chr1_3:67014396-67014415 None:intergenic 55.0%
CCCCTTGTCCTAGAAACCTC+AGG - chr1_3:67014529-67014548 None:intergenic 55.0%
!! AGGTTTCTAGGACAAGGGGG+CGG + chr1_3:67014530-67014549 Msa0135380:intron 55.0%
ATACACGTGGCACGTTGACC+CGG - chr1_3:67015421-67015440 None:intergenic 55.0%
AGGGAGATTGTTGTGGCGGT+TGG - chr1_3:67015916-67015935 None:intergenic 55.0%
TAGAACGGCGGTGACAGAGA+GGG - chr1_3:67015935-67015954 None:intergenic 55.0%
TTAGAACGGCGGTGACAGAG+AGG - chr1_3:67015936-67015955 None:intergenic 55.0%
ACGAACCTCATCGTCGGAGT+TGG + chr1_3:67016068-67016087 Msa0135380:intron 55.0%
CGATTCCAACTCCGACGATG+AGG - chr1_3:67016076-67016095 None:intergenic 55.0%
GTTGGAATCGCCGTCATCCA+CGG + chr1_3:67016086-67016105 Msa0135380:intron 55.0%
! AAGAATGGCAGCGGTGATGG+CGG + chr1_3:67016235-67016254 Msa0135380:intron 55.0%
TACACACGTGGCAGCCACTT+AGG + chr1_3:67016530-67016549 Msa0135380:intron 55.0%
!! CAGCCACTTAGGCGTTGACT+TGG + chr1_3:67016541-67016560 Msa0135380:intron 55.0%
! AGTGTGAGTTGACTCACGCG+GGG - chr1_3:67017236-67017255 None:intergenic 55.0%
! GAGTGTGAGTTGACTCACGC+GGG - chr1_3:67017237-67017256 None:intergenic 55.0%
! CGAGTGTGAGTTGACTCACG+CGG - chr1_3:67017238-67017257 None:intergenic 55.0%
CGCGTGAGTCAACTCACACT+CGG + chr1_3:67017236-67017255 Msa0135380:intron 55.0%
GCGTGAGTTAACTCACGCAG+CGG + chr1_3:67017370-67017389 Msa0135380:intron 55.0%
CGTGAGTTAACTCACGCAGC+GGG + chr1_3:67017371-67017390 Msa0135380:intron 55.0%
TGGGAGTGAGCGTCTTAGGT+TGG + chr1_3:67017412-67017431 Msa0135380:intron 55.0%
GGGAGTGAGCGTCTTAGGTT+GGG + chr1_3:67017413-67017432 Msa0135380:intron 55.0%
GGAATGAAGAGAGCAGCCTC+AGG - chr1_3:67017550-67017569 None:intergenic 55.0%
AAGGGCAGTGGCGTTTGTAG+TGG + chr1_3:67017632-67017651 Msa0135380:CDS 55.0%
! GGTGCATGGTCTAAGGCATG+GGG - chr1_3:67020586-67020605 None:intergenic 55.0%
! GTGGTGCATGGTCTAAGGCA+TGG - chr1_3:67020588-67020607 None:intergenic 55.0%
ATATCTGCCTTCGCTAGGGG+TGG + chr1_3:67020960-67020979 Msa0135380:intron 55.0%
!!! CCGTGACGGATTTTACCCAC+GGG - chr1_3:67021010-67021029 None:intergenic 55.0%
CCCGTGGGTAAAATCCGTCA+CGG + chr1_3:67021007-67021026 Msa0135380:intron 55.0%
!!! CCCGTGACGGATTTTACCCA+CGG - chr1_3:67021011-67021030 None:intergenic 55.0%
CCGTGGGTAAAATCCGTCAC+GGG + chr1_3:67021008-67021027 Msa0135380:intron 55.0%
AATCCGTCACGGGTATGGAG+CGG + chr1_3:67021018-67021037 Msa0135380:intron 55.0%
! GAGGTATCCATGGGTACCCA+TGG - chr1_3:67021350-67021369 None:intergenic 55.0%
CTCGTGGGTACCCACTATAC+GGG - chr1_3:67021387-67021406 None:intergenic 55.0%
CCTCGTGGGTACCCACTATA+CGG - chr1_3:67021388-67021407 None:intergenic 55.0%
AGTGGGTACCCACGAGGATA+CGG + chr1_3:67021391-67021410 Msa0135380:intron 55.0%
TACAAACCCGTGCTTCGCAC+GGG - chr1_3:67021953-67021972 None:intergenic 55.0%
AGTGAGATTTCGTGTCCCGC+TGG - chr1_3:67022765-67022784 None:intergenic 55.0%
CGTGCTCCCTTGGTAGAAAC+TGG + chr1_3:67023646-67023665 Msa0135380:intron 55.0%
AGCGCTCGAAGATCGAGCAA+TGG + chr1_3:67025070-67025089 Msa0135380:CDS 55.0%
ATCGGCACGCTGTACGGGTT+CGG - chr1_3:67009896-67009915 None:intergenic 60.0%
! AACCCGTACAGCGTGCCGAT+AGG + chr1_3:67009896-67009915 Msa0135380:intron 60.0%
CATGGAGTCTGTGGGGGGAA+AGG + chr1_3:67010096-67010115 Msa0135380:intron 60.0%
CCTCGTGAGCTTAGCTCGGT+TGG - chr1_3:67011273-67011292 None:intergenic 60.0%
CCAACCGAGCTAAGCTCACG+AGG + chr1_3:67011270-67011289 Msa0135380:intron 60.0%
TGCAGGTGCCCATCAAGCCT+GGG - chr1_3:67013733-67013752 None:intergenic 60.0%
TTGCAGGTGCCCATCAAGCC+TGG - chr1_3:67013734-67013753 None:intergenic 60.0%
ATAGGTATGGGCTTGGGCCC+GGG + chr1_3:67013791-67013810 Msa0135380:intron 60.0%
GATGGGTATGGGTGCGGGTA+AGG + chr1_3:67013832-67013851 Msa0135380:intron 60.0%
!! GCGGGTAATGGGTACGGGTA+TGG + chr1_3:67014249-67014268 Msa0135380:intron 60.0%
TACCCACGAGGATACGGGCT+CGG + chr1_3:67014316-67014335 Msa0135380:intron 60.0%
GTTGTGGCGGTTGGAATGGG+AGG - chr1_3:67015907-67015926 None:intergenic 60.0%
! GTGTGAGTTGACTCACGCGG+GGG - chr1_3:67017235-67017254 None:intergenic 60.0%
ATCCGTCACGGGTATGGAGC+GGG + chr1_3:67021019-67021038 Msa0135380:intron 60.0%
TACCCGCTCCATACCCGTGA+CGG - chr1_3:67021024-67021043 None:intergenic 60.0%
! ACGGGTACCCGTGGGTATTG+AGG - chr1_3:67021369-67021388 None:intergenic 60.0%
ACCCACGGGTACCCGTATAG+TGG + chr1_3:67021373-67021392 Msa0135380:intron 60.0%
CCCACTATACGGGTACCCGT+GGG - chr1_3:67021377-67021396 None:intergenic 60.0%
CCCACGGGTACCCGTATAGT+GGG + chr1_3:67021374-67021393 Msa0135380:intron 60.0%
ACCCACTATACGGGTACCCG+TGG - chr1_3:67021378-67021397 None:intergenic 60.0%
!! CCGTATAGTGGGTACCCACG+AGG + chr1_3:67021385-67021404 Msa0135380:intron 60.0%
GTGGGTACCCACGAGGATAC+GGG + chr1_3:67021392-67021411 Msa0135380:intron 60.0%
TGGGTACCCACGAGGATACG+GGG + chr1_3:67021393-67021412 Msa0135380:intron 60.0%
ACTGAACCCCGTGCGAAGCA+CGG + chr1_3:67021943-67021962 Msa0135380:intron 60.0%
ACAAACCCGTGCTTCGCACG+GGG - chr1_3:67021952-67021971 None:intergenic 60.0%
TCGGCACGCTGTACGGGTTC+GGG - chr1_3:67009895-67009914 None:intergenic 65.0%
! GTATATGCGGGCTGCGGGGT+TGG - chr1_3:67013870-67013889 None:intergenic 65.0%
ACCCACGAGGATACGGGCTC+GGG + chr1_3:67014317-67014336 Msa0135380:intron 65.0%
ACCCGAGCCCGTATCCTCGT+GGG - chr1_3:67014321-67014340 None:intergenic 65.0%
TACCCGAGCCCGTATCCTCG+TGG - chr1_3:67014322-67014341 None:intergenic 65.0%
CGAGGATACGGGCTCGGGTA+TGG + chr1_3:67014322-67014341 Msa0135380:intron 65.0%
GGCGGTTGGAATGGGAGGAG+TGG - chr1_3:67015902-67015921 None:intergenic 65.0%
GGAATCGCCGTCATCCACGG+CGG + chr1_3:67016089-67016108 Msa0135380:intron 65.0%
!! AATGGCAGCGGTGATGGCGG+TGG + chr1_3:67016238-67016257 Msa0135380:intron 65.0%
CCACGGGTACCCATGGGCAT+GGG - chr1_3:67020994-67021013 None:intergenic 65.0%
CCATGCCCATGGGTACCCGT+GGG + chr1_3:67020992-67021011 Msa0135380:intron 65.0%
GTACCCACGAGGATACGGGG+CGG + chr1_3:67021396-67021415 Msa0135380:intron 65.0%
TGTCCGCCCCGTATCCTCGT+GGG - chr1_3:67021402-67021421 None:intergenic 65.0%
GATACATGTCCCCGCCCCGT+TGG - chr1_3:67021441-67021460 None:intergenic 65.0%
CTGAACCCCGTGCGAAGCAC+GGG + chr1_3:67021944-67021963 Msa0135380:intron 65.0%
GCTGTACGGGTTCGGGGTCG+TGG - chr1_3:67009888-67009907 None:intergenic 70.0%
CGGCACGCTGTACGGGTTCG+GGG - chr1_3:67009894-67009913 None:intergenic 70.0%
CCCATGCCCATGGGTACCCG+TGG + chr1_3:67020991-67021010 Msa0135380:intron 70.0%
CCCACGGGTACCCATGGGCA+TGG - chr1_3:67020995-67021014 None:intergenic 70.0%
GTGTCCGCCCCGTATCCTCG+TGG - chr1_3:67021403-67021422 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 67009205 67025316 67009205 ID=Msa0135380;Name=Msa0135380
chr1_3 mRNA 67009205 67025316 67009205 ID=Msa0135380-mRNA-1;Parent=Msa0135380;Name=Msa0135380-mRNA-1;_AED=0.41;_eAED=0.43;_QI=0|0|0|1|0|0.2|5|0|251
chr1_3 exon 67009205 67009222 67009205 ID=Msa0135380-mRNA-1:exon:22957;Parent=Msa0135380-mRNA-1
chr1_3 exon 67012404 67012498 67012404 ID=Msa0135380-mRNA-1:exon:22958;Parent=Msa0135380-mRNA-1
chr1_3 exon 67017611 67017665 67017611 ID=Msa0135380-mRNA-1:exon:22959;Parent=Msa0135380-mRNA-1
chr1_3 exon 67022260 67022319 67022260 ID=Msa0135380-mRNA-1:exon:22960;Parent=Msa0135380-mRNA-1
chr1_3 exon 67024789 67025316 67024789 ID=Msa0135380-mRNA-1:exon:22961;Parent=Msa0135380-mRNA-1
chr1_3 CDS 67009205 67009222 67009205 ID=Msa0135380-mRNA-1:cds;Parent=Msa0135380-mRNA-1
chr1_3 CDS 67012404 67012498 67012404 ID=Msa0135380-mRNA-1:cds;Parent=Msa0135380-mRNA-1
chr1_3 CDS 67017611 67017665 67017611 ID=Msa0135380-mRNA-1:cds;Parent=Msa0135380-mRNA-1
chr1_3 CDS 67022260 67022319 67022260 ID=Msa0135380-mRNA-1:cds;Parent=Msa0135380-mRNA-1
chr1_3 CDS 67024789 67025316 67024789 ID=Msa0135380-mRNA-1:cds;Parent=Msa0135380-mRNA-1
Gene Sequence

>Msa0135380

ATGAATTGGAGTTTAAAGATGAGAAGATCCAGAGTAAATGCCAAGATTGGTGAAGCTGAAGCACTTGCGTTTATAATGAAAGTGAAATATGCGTTTCAAGATAAGAGAGAAAAAGTTATCGGAGAAGGTAATGGAAGGGCAGTGGCGTTTGTAGTGGAAGTAAAACATATGAACAGCTCCAGAAGAACAAAACCCTTGATTGGTGATGCAATGGAGTTTATAAAGGATATGAACAGCTCAAGAAGAACAGGTCCCTTGATTGACGATGCAAGGGTGTTTGTAAAGGATGTAGAAGCTGTGTTTCAAGATAAGAGGGAGAAGTATGATGAATTCGTGAAACTCCTACAAGATTTTGGCGCCAAAAGAATTGATAGAAGAGTCGTCAAAGAAGGAGTTATGGAGTTGTTGAAAGAGCATCAAGATTTAATTTCAAGATTCAACATCTTCTTGCCACCAGGACATGAAATCCCACTTCCATTGGATGATGATTTACAACATCGTGATCAATCAGCGCTCGAAGATCGAGCAATGGCATTTTTAACAACAGTTAAGGTTACATTTGAAGATAAGATGGAAAAGTTCAATGAATTCTTGAAACTCCTAGCTGATTACCGTGCCAAAAGAATTGATGTAAGAGTTGTCAAAGAAGGAATGATGGAGTTGTTTAAAGACCATAAAAATTTACTTTTGGGATTCAACACCTTCTTGCCAGAGGGACACAAAATCTCACTTCCATTGGATGGTGATGAACAATAA
Protein sequence

>Msa0135380

MNWSLKMRRSRVNAKIGEAEALAFIMKVKYAFQDKREKVIGEGNGRAVAFVVEVKHMNSSRRTKPLIGDAMEFIKDMNSSRRTGPLIDDARVFVKDVEAVFQDKREKYDEFVKLLQDFGAKRIDRRVVKEGVMELLKEHQDLISRFNIFLPPGHEIPLPLDDDLQHRDQSALEDRAMAFLTTVKVTFEDKMEKFNEFLKLLADYRAKRIDVRVVKEGMMELFKDHKNLLLGFNTFLPEGHKISLPLDGDEQ*