AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0115560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0115560 MtrunA17_Chr1g0212331 93.505 1047 16 4 1 1002 1 1040 0.0 1993
Msa0115560 MtrunA17_Chr2g0281601 54.975 804 288 13 258 1002 515 1303 0.0 816
Msa0115560 MtrunA17_Chr1g0168031 32.012 681 301 13 364 1000 590 1152 1.46e-100 342
Msa0115560 MtrunA17_Chr7g0255821 30.448 647 317 14 365 1000 296 820 8.48e-90 305
Msa0115560 MtrunA17_Chr4g0024921 29.455 825 404 24 261 1001 204 934 7.30e-89 305
Msa0115560 MtrunA17_Chr2g0320751 30.289 657 322 14 363 1000 476 1015 2.07e-88 305
Msa0115560 MtrunA17_Chr1g0163011 41.985 131 76 0 849 979 588 718 1.05e-25 114
Msa0115560 MtrunA17_Chr7g0257101 44.094 127 71 0 845 971 1206 1332 7.45e-25 112
Msa0115560 MtrunA17_Chr5g0403921 42.029 138 77 2 849 983 524 661 7.47e-24 108
Msa0115560 MtrunA17_Chr5g0428401 26.835 395 209 12 351 703 475 831 2.41e-23 107
Msa0115560 MtrunA17_Chr5g0428401 31.973 147 80 3 830 967 1487 1622 1.77e-15 82.0
Msa0115560 MtrunA17_Chr4g0017211 30.137 292 171 6 740 1000 1693 1982 2.74e-23 107
Msa0115560 MtrunA17_Chr4g0017211 23.511 319 159 7 366 660 1508 1765 2.75e-16 84.7
Msa0115560 MtrunA17_Chr1g0175191 40.476 126 75 0 849 974 1080 1205 3.01e-23 107
Msa0115560 MtrunA17_Chr1g0175191 28.251 223 127 6 460 661 601 811 2.01e-15 81.6
Msa0115560 MtrunA17_Chr4g0052341 37.333 150 87 3 849 996 1078 1222 7.73e-21 99.4
Msa0115560 MtrunA17_Chr4g0052341 26.437 174 116 4 487 660 877 1038 1.32e-12 72.4
Msa0115560 MtrunA17_Chr1g0183681 38.333 120 74 0 849 968 753 872 3.84e-20 97.1
Msa0115560 MtrunA17_Chr1g0183681 24.062 320 185 11 366 665 442 723 2.96e-11 67.8
Msa0115560 MtrunA17_Chr4g0040301 38.095 126 78 0 849 974 398 523 3.42e-19 93.2
Msa0115560 MtrunA17_Chr4g0066741 41.525 118 68 1 849 965 507 624 6.05e-19 92.8
Msa0115560 MtrunA17_Chr4g0066741 27.273 176 116 3 486 661 307 470 9.00e-15 79.3
Msa0115560 MtrunA17_Chr2g0286291 41.525 118 68 1 849 965 510 627 8.37e-19 92.4
Msa0115560 MtrunA17_Chr2g0286291 26.966 178 118 3 484 661 308 473 2.11e-14 78.2
Msa0115560 MtrunA17_Chr8g0348721 39.024 123 71 2 849 970 1331 1450 1.90e-18 91.7
Msa0115560 MtrunA17_Chr3g0095091 39.062 128 75 2 849 975 905 1030 2.42e-18 91.3
Msa0115560 MtrunA17_Chr3g0095091 29.282 181 115 4 482 661 693 861 2.60e-15 81.3
Msa0115560 MtrunA17_Chr8g0384531 36.667 120 76 0 849 968 758 877 3.47e-18 90.5
Msa0115560 MtrunA17_Chr5g0442141 38.281 128 76 2 849 975 951 1076 5.18e-18 90.1
Msa0115560 MtrunA17_Chr5g0442141 22.222 297 170 9 367 661 670 907 1.28e-11 69.3
Msa0115560 MtrunA17_Chr3g0137091 36.719 128 78 2 849 975 629 754 1.35e-17 88.6
Msa0115560 MtrunA17_Chr3g0137091 24.022 179 122 4 483 661 426 590 5.48e-11 67.0
Msa0115560 MtrunA17_Chr1g0205891 35.484 155 96 2 849 1002 704 855 2.38e-17 87.8
Msa0115560 MtrunA17_Chr1g0205891 26.562 192 119 5 484 664 493 673 7.30e-14 76.3
Msa0115560 MtrunA17_Chr5g0394201 34.641 153 96 2 849 1000 690 839 2.90e-17 87.4
Msa0115560 MtrunA17_Chr5g0394201 26.882 186 115 4 484 659 480 654 1.47e-13 75.5
Msa0115560 MtrunA17_Chr4g0066651 38.710 124 75 1 849 971 1326 1449 3.61e-17 87.4
Msa0115560 MtrunA17_Chr7g0248031 37.398 123 73 2 849 970 1339 1458 6.64e-17 86.7
Msa0115560 MtrunA17_Chr7g0232121 32.877 146 86 1 849 982 383 528 7.04e-17 85.9
Msa0115560 MtrunA17_Chr7g0232121 27.536 207 134 6 484 679 166 367 3.82e-12 70.5
Msa0115560 MtrunA17_Chr7g0231521 32.192 146 87 1 849 982 304 449 1.80e-16 84.7
Msa0115560 MtrunA17_Chr1g0190381 35.211 142 78 2 849 976 206 347 3.41e-16 83.2
Msa0115560 MtrunA17_Chr4g0047081 30.872 149 95 3 849 990 1054 1201 2.36e-14 78.2
Msa0115560 MtrunA17_Chr2g0320781 31.081 148 90 3 833 971 95 239 3.15e-14 73.6
Msa0115560 MtrunA17_Chr3g0086111 38.739 111 68 0 849 959 552 662 3.55e-14 77.4
Msa0115560 MtrunA17_Chr7g0225791 31.690 142 91 2 849 984 1104 1245 5.59e-14 77.0
Msa0115560 MtrunA17_Chr3g0083491 27.632 152 104 3 847 994 1169 1318 8.27e-14 76.3
Msa0115560 MtrunA17_Chr5g0393461 30.769 156 103 3 849 1000 557 711 9.08e-14 75.9
Msa0115560 MtrunA17_Chr4g0069451 35.345 116 75 0 849 964 488 603 1.42e-13 75.1
Msa0115560 MtrunA17_Chr7g0232991 30.000 140 93 2 849 983 479 618 3.84e-13 73.6
Msa0115560 MtrunA17_Chr7g0233001 29.054 148 93 3 849 987 339 483 7.72e-13 72.4
Msa0115560 MtrunA17_Chr7g0233021 29.940 167 106 5 825 984 1029 1191 4.76e-12 70.5
Msa0115560 MtrunA17_Chr2g0296421 33.858 127 78 3 842 963 860 985 2.22e-11 68.2
Msa0115560 MtrunA17_Chr8g0352361 33.333 126 78 3 842 962 711 835 3.05e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0115560 AT1G50410.2 60.277 939 276 14 120 1002 84 981 0.0 1050
Msa0115560 AT1G50410.1 60.277 939 276 14 120 1002 84 981 0.0 1050
Msa0115560 AT1G50410.3 60.277 939 276 14 120 1002 84 981 0.0 1050
Msa0115560 AT3G20010.1 52.952 1067 360 22 58 1002 1 1047 0.0 983
Msa0115560 AT3G20010.5 52.952 1067 360 22 58 1002 1 1047 0.0 983
Msa0115560 AT3G20010.7 52.952 1067 360 22 58 1002 1 1047 0.0 983
Msa0115560 AT3G20010.3 66.379 696 209 8 311 1002 107 781 0.0 909
Msa0115560 AT3G20010.2 66.379 696 209 8 311 1002 82 756 0.0 909
Msa0115560 AT1G50410.4 56.138 839 271 14 120 902 84 881 0.0 849
Msa0115560 AT3G20010.4 48.601 965 354 22 58 900 1 945 0.0 783
Msa0115560 AT3G20010.6 48.601 965 354 22 58 900 1 945 0.0 783
Msa0115560 AT3G20010.8 48.601 965 354 22 58 900 1 945 0.0 783
Msa0115560 AT1G61140.3 52.116 827 307 20 228 1001 329 1119 0.0 744
Msa0115560 AT1G61140.1 52.116 827 307 20 228 1001 487 1277 0.0 743
Msa0115560 AT1G11100.3 52.219 766 317 10 272 1001 374 1126 0.0 728
Msa0115560 AT1G11100.4 52.219 766 317 10 272 1001 517 1269 0.0 727
Msa0115560 AT1G11100.2 52.219 766 317 10 272 1001 516 1268 0.0 727
Msa0115560 AT1G11100.5 49.737 760 301 8 272 1001 374 1082 0.0 687
Msa0115560 AT1G11100.1 49.737 760 301 8 272 1001 517 1225 0.0 687
Msa0115560 AT3G16600.1 45.192 520 198 9 256 759 8 456 7.84e-144 444
Msa0115560 AT3G16600.1 74.227 97 25 0 885 981 493 589 3.31e-36 146
Msa0115560 AT1G61140.2 50.860 523 190 16 228 702 494 997 2.16e-138 441
Msa0115560 AT5G22750.1 31.250 656 315 13 364 1000 490 1028 4.00e-98 333
Msa0115560 AT5G43530.1 32.073 661 306 15 361 1000 738 1276 6.47e-98 337
Msa0115560 AT1G05120.1 31.704 716 335 15 363 1000 192 831 1.04e-91 311
Msa0115560 AT1G05120.2 31.704 716 335 15 363 1000 235 874 3.02e-91 311
Msa0115560 AT5G05130.1 31.341 619 301 12 366 979 360 859 1.51e-79 278
Msa0115560 AT1G02670.4 32.164 342 154 7 358 672 172 462 1.14e-36 146
Msa0115560 AT1G02670.6 47.368 152 79 1 849 1000 512 662 2.30e-36 147
Msa0115560 AT1G02670.6 32.424 330 147 6 358 660 145 425 5.91e-36 146
Msa0115560 AT1G02670.7 47.368 152 79 1 849 1000 516 666 2.80e-36 147
Msa0115560 AT1G02670.7 28.962 366 183 10 358 715 172 468 6.72e-30 127
Msa0115560 AT1G02670.3 47.368 152 79 1 849 1000 539 689 2.89e-36 147
Msa0115560 AT1G02670.3 32.164 342 154 7 358 672 172 462 7.04e-36 146
Msa0115560 AT1G02670.1 47.368 152 79 1 849 1000 527 677 2.97e-36 147
Msa0115560 AT1G02670.1 28.767 365 185 9 358 715 183 479 4.96e-30 127
Msa0115560 AT1G02670.5 32.164 342 154 7 358 672 145 435 4.72e-36 145
Msa0115560 AT1G02670.5 52.475 101 48 0 849 949 512 612 6.15e-27 117
Msa0115560 AT1G02670.2 32.164 342 154 7 358 672 172 462 6.73e-36 145
Msa0115560 AT1G02670.2 52.475 101 48 0 849 949 539 639 6.49e-27 117
Msa0115560 AT2G02090.1 42.857 154 77 2 834 978 582 733 1.31e-27 120
Msa0115560 AT2G40770.2 26.899 316 173 8 365 657 501 781 1.27e-26 118
Msa0115560 AT2G40770.2 31.902 163 100 3 849 1000 1451 1613 6.12e-16 84.0
Msa0115560 AT2G40770.1 26.899 316 173 8 365 657 501 781 1.27e-26 118
Msa0115560 AT2G40770.1 31.902 163 100 3 849 1000 1451 1613 6.12e-16 84.0
Msa0115560 AT2G40770.3 26.899 316 173 8 365 657 501 781 1.27e-26 118
Msa0115560 AT2G40770.3 31.902 163 100 3 849 1000 1451 1613 6.12e-16 84.0
Msa0115560 AT3G57300.1 41.549 142 83 0 845 986 1220 1361 1.66e-25 115
Msa0115560 AT3G57300.4 41.549 142 83 0 845 986 1220 1361 1.66e-25 115
Msa0115560 AT3G57300.2 41.549 142 83 0 845 986 1253 1394 1.68e-25 115
Msa0115560 AT3G54280.1 30.802 237 136 4 790 1000 1750 1984 2.16e-24 111
Msa0115560 AT3G54280.1 24.107 336 168 9 366 675 1509 1783 1.14e-16 86.3
Msa0115560 AT3G54280.2 30.802 237 136 4 790 1000 1781 2015 2.28e-24 111
Msa0115560 AT3G54280.2 24.107 336 168 9 366 675 1540 1814 1.57e-16 85.9
Msa0115560 AT5G66750.1 40.299 134 79 1 849 981 542 675 2.44e-24 110
Msa0115560 AT3G12810.2 41.732 127 74 0 846 972 1086 1212 2.06e-23 108
Msa0115560 AT3G12810.2 28.177 181 110 4 489 661 654 822 2.45e-13 75.5
Msa0115560 AT3G12810.1 41.732 127 74 0 846 972 1090 1216 2.18e-23 108
Msa0115560 AT3G12810.1 28.177 181 110 4 489 661 658 826 2.47e-13 75.5
Msa0115560 AT3G54460.1 20.906 684 399 20 363 996 753 1344 3.07e-23 107
Msa0115560 AT5G63950.1 36.154 130 83 0 849 978 750 879 1.55e-19 95.1
Msa0115560 AT5G63950.2 36.154 130 83 0 849 978 733 862 1.62e-19 95.1
Msa0115560 AT2G44980.1 37.778 135 83 1 849 982 386 520 1.90e-19 94.7
Msa0115560 AT2G44980.1 26.961 204 136 6 484 679 172 370 1.01e-13 76.3
Msa0115560 AT1G03750.1 38.889 126 77 0 849 974 546 671 1.93e-19 94.7
Msa0115560 AT5G44800.1 38.400 125 75 1 849 971 1022 1146 5.44e-19 94.0
Msa0115560 AT5G44800.1 26.554 177 118 4 484 660 818 982 3.62e-11 68.2
Msa0115560 AT2G18760.3 35.833 120 77 0 849 968 804 923 1.62e-18 92.0
Msa0115560 AT2G18760.4 35.833 120 77 0 849 968 745 864 1.66e-18 92.0
Msa0115560 AT2G18760.1 35.833 120 77 0 849 968 745 864 1.66e-18 92.0
Msa0115560 AT2G18760.2 35.833 120 77 0 849 968 745 864 1.66e-18 92.0
Msa0115560 AT2G18760.7 35.833 120 77 0 849 968 745 864 1.66e-18 92.0
Msa0115560 AT2G18760.5 35.833 120 77 0 849 968 745 864 1.66e-18 92.0
Msa0115560 AT2G18760.6 35.833 120 77 0 849 968 745 864 1.66e-18 92.0
Msa0115560 AT2G13370.1 38.281 128 76 2 849 975 957 1082 1.98e-18 92.0
Msa0115560 AT2G13370.1 26.519 181 120 4 482 661 747 915 5.92e-12 70.9
Msa0115560 AT2G13370.2 38.281 128 76 2 849 975 957 1082 1.98e-18 92.0
Msa0115560 AT2G13370.2 26.519 181 120 4 482 661 747 915 5.92e-12 70.9
Msa0115560 AT2G13370.3 38.281 128 76 2 849 975 957 1082 1.98e-18 92.0
Msa0115560 AT2G13370.3 26.519 181 120 4 482 661 747 915 5.92e-12 70.9
Msa0115560 AT5G18620.2 39.831 118 70 1 849 965 513 630 2.12e-18 91.7
Msa0115560 AT5G18620.2 25.843 178 120 3 484 661 311 476 6.96e-14 77.0
Msa0115560 AT5G18620.1 39.831 118 70 1 849 965 513 630 2.25e-18 91.7
Msa0115560 AT5G18620.1 25.843 178 120 3 484 661 311 476 7.70e-14 76.6
Msa0115560 AT2G44980.3 35.862 145 82 2 849 982 394 538 3.10e-18 90.9
Msa0115560 AT2G44980.3 26.033 242 156 8 456 679 142 378 3.02e-14 77.8
Msa0115560 AT2G44980.2 35.862 145 82 2 849 982 395 539 3.41e-18 90.9
Msa0115560 AT2G44980.2 26.033 242 156 8 456 679 143 379 3.59e-14 77.8
Msa0115560 AT3G06400.3 39.831 118 70 1 849 965 508 625 3.86e-18 90.9
Msa0115560 AT3G06400.3 27.374 179 118 3 483 661 305 471 3.43e-15 81.3
Msa0115560 AT3G06400.2 39.831 118 70 1 849 965 508 625 3.96e-18 90.9
Msa0115560 AT3G06400.2 27.374 179 118 3 483 661 305 471 3.34e-15 81.3
Msa0115560 AT3G06400.1 39.831 118 70 1 849 965 508 625 4.09e-18 90.5
Msa0115560 AT3G06400.1 27.374 179 118 3 483 661 305 471 3.51e-15 81.3
Msa0115560 AT2G25170.1 36.719 128 78 2 849 975 613 738 7.23e-18 90.1
Msa0115560 AT2G25170.1 25.253 198 132 5 482 679 409 590 1.96e-12 72.4
Msa0115560 AT2G25170.4 36.719 128 78 2 849 975 613 738 7.23e-18 90.1
Msa0115560 AT2G25170.4 25.253 198 132 5 482 679 409 590 1.96e-12 72.4
Msa0115560 AT2G25170.2 36.719 128 78 2 849 975 630 755 8.18e-18 89.7
Msa0115560 AT2G25170.2 25.253 198 132 5 482 679 426 607 2.20e-12 72.0
Msa0115560 AT2G25170.3 36.719 128 78 2 849 975 639 764 9.39e-18 89.7
Msa0115560 AT2G25170.3 25.253 198 132 5 482 679 435 616 2.72e-12 72.0
Msa0115560 AT2G28290.2 38.710 124 75 1 849 971 1091 1214 1.18e-17 89.7
Msa0115560 AT2G28290.3 38.710 124 75 1 849 971 1091 1214 1.26e-17 89.7
Msa0115560 AT2G28290.4 38.710 124 75 1 849 971 1091 1214 1.26e-17 89.7
Msa0115560 AT2G28290.1 38.710 124 75 1 849 971 1091 1214 1.26e-17 89.7
Msa0115560 AT2G28290.6 38.710 124 75 1 849 971 1092 1215 1.27e-17 89.4
Msa0115560 AT2G28290.5 38.710 124 75 1 849 971 1092 1215 1.27e-17 89.4
Msa0115560 AT3G06010.1 35.948 153 94 2 849 1000 731 880 6.97e-17 86.7
Msa0115560 AT3G06010.1 27.957 186 113 4 484 659 520 694 4.91e-15 80.5
Msa0115560 AT2G46020.5 40.351 114 65 2 849 961 1325 1436 9.37e-17 86.7
Msa0115560 AT2G46020.1 40.351 114 65 2 849 961 1325 1436 9.37e-17 86.7
Msa0115560 AT2G46020.6 40.351 114 65 2 849 961 1325 1436 9.37e-17 86.7
Msa0115560 AT2G46020.2 40.351 114 65 2 849 961 1326 1437 9.61e-17 86.7
Msa0115560 AT2G46020.3 40.351 114 65 2 849 961 1326 1437 9.61e-17 86.7
Msa0115560 AT2G46020.4 40.351 114 65 2 849 961 1326 1437 9.61e-17 86.7
Msa0115560 AT5G19310.2 38.583 127 75 2 849 974 449 573 2.17e-16 84.7
Msa0115560 AT5G19310.2 27.354 223 129 6 459 659 201 412 2.93e-14 77.8
Msa0115560 AT1G08600.4 35.211 142 78 2 849 976 1133 1274 2.45e-16 85.1
Msa0115560 AT1G08600.3 35.211 142 78 2 849 976 1133 1274 2.45e-16 85.1
Msa0115560 AT1G08600.2 35.211 142 78 2 849 976 1133 1274 2.45e-16 85.1
Msa0115560 AT3G54460.2 28.477 151 104 2 849 996 898 1047 2.60e-16 84.7
Msa0115560 AT5G19310.1 34.641 153 96 2 849 1000 713 862 2.61e-16 84.7
Msa0115560 AT5G19310.1 26.906 223 130 6 459 659 465 676 4.77e-14 77.4
Msa0115560 AT1G08600.1 35.211 142 78 2 849 976 1112 1253 2.81e-16 84.7
Msa0115560 AT4G31900.3 31.618 136 92 1 849 983 542 677 1.78e-15 82.0
Msa0115560 AT4G31900.3 26.396 197 124 4 483 679 344 519 1.42e-14 79.3
Msa0115560 AT4G31900.1 31.618 136 92 1 849 983 542 677 1.98e-15 82.0
Msa0115560 AT4G31900.1 26.396 197 124 4 483 679 344 519 1.62e-14 79.0
Msa0115560 AT4G31900.2 31.618 136 92 1 849 983 501 636 2.04e-15 82.0
Msa0115560 AT4G31900.2 26.396 197 124 4 483 679 303 478 1.74e-14 79.0
Msa0115560 AT3G24340.1 34.286 140 80 3 849 979 945 1081 8.14e-15 80.1
Msa0115560 AT1G48310.2 32.414 145 98 0 827 971 469 613 1.82e-14 78.6
Msa0115560 AT1G48310.1 32.414 145 98 0 827 971 464 608 1.94e-14 78.2
Msa0115560 AT1G48310.3 32.414 145 98 0 827 971 464 608 2.09e-14 78.2
Msa0115560 AT3G19210.1 32.051 156 101 3 849 1000 553 707 3.09e-14 77.8
Msa0115560 AT3G19210.2 32.051 156 101 3 849 1000 551 705 3.39e-14 77.8
Msa0115560 AT3G19210.3 32.051 156 101 3 849 1000 553 707 3.45e-14 77.8
Msa0115560 AT1G05490.1 33.813 139 84 3 849 980 1217 1354 1.37e-12 72.8
Msa0115560 AT5G07810.1 33.333 114 76 0 849 962 556 669 1.40e-12 72.8

Find 260 sgRNAs with CRISPR-Local

Find 805 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGTAGGTGGTTGGGTTTC+TGG 0.027826 1_3:+34425939 Msa0115560:CDS
CGCCTCAATTCTTTCCTTTC+AGG 0.035105 1_3:+34423823 Msa0115560:five_prime_UTR
TGATTCACGTTCTCAATTTA+AGG 0.116064 1_3:+34430387 Msa0115560:CDS
CATTTGATGGTTCTATTTCT+AGG 0.130546 1_3:+34426084 Msa0115560:CDS
TGAATAGAATTTCTGGATAT+TGG 0.151101 1_3:-34429415 None:intergenic
AATTCAAGGCTTCAGCTTTA+TGG 0.156810 1_3:-34428673 None:intergenic
GTAACCTTGAATAGAATTTC+TGG 0.162895 1_3:-34429422 None:intergenic
ATGTGATTTAAACTGATTAA+TGG 0.194685 1_3:+34433971 Msa0115560:three_prime_UTR
TAAAGCTGAAGCCTTGAATT+TGG 0.196050 1_3:+34428676 Msa0115560:CDS
CAAACAACCTATTTGCTAAA+TGG 0.208544 1_3:-34425829 None:intergenic
ATTAGTCTCTCATCAGTTTC+AGG 0.221036 1_3:-34426843 None:intergenic
AAGTTATTTAATCTGTTATT+AGG 0.236063 1_3:-34426576 None:intergenic
TTGCAAAAGTAGGTTGGTTT+AGG 0.237456 1_3:+34429191 Msa0115560:CDS
CGCATGTCATGTTATTCTTT+TGG 0.239707 1_3:+34432516 Msa0115560:CDS
GAACTACTCGGTTCAGTAAT+AGG 0.252859 1_3:-34428776 None:intergenic
ATTAGCGAAATGTGTGAAAA+AGG 0.258433 1_3:-34423767 None:intergenic
AGGAAACCTTGGTTTAAATA+TGG 0.268636 1_3:+34432489 Msa0115560:CDS
AGCAAATAGGTTGTTTGTTA+AGG 0.268906 1_3:+34425835 Msa0115560:five_prime_UTR
GAATAGAATTTCTGGATATT+GGG 0.273088 1_3:-34429414 None:intergenic
CCAGAGCTTGCTCCAGCCTT+AGG 0.279556 1_3:+34429263 Msa0115560:CDS
ATGATTTATATAGCTACTTT+AGG 0.279893 1_3:+34429335 Msa0115560:CDS
GAAGACCATGCTGGCGGTTC+TGG 0.285184 1_3:+34433403 Msa0115560:CDS
ATTTCCTCCATTTAGCAAAT+AGG 0.289725 1_3:+34425822 Msa0115560:five_prime_UTR
CTCGGACCAGGTTGATTATT+GGG 0.293648 1_3:-34426393 None:intergenic
AATTTATGAAGCAGCATTAC+AGG 0.294583 1_3:+34426863 Msa0115560:CDS
AGTGAATCTGCGTACCGTTC+TGG 0.303097 1_3:+34426801 Msa0115560:CDS
GCCTCCTAAAACAATTAATC+TGG 0.315310 1_3:+34430312 Msa0115560:CDS
CTCCTCGACTAACGGTTGTT+TGG 0.316018 1_3:-34429017 None:intergenic
TTAGGAGGCAAAGTGATTAT+AGG 0.316851 1_3:-34430298 None:intergenic
AAAGGCAATCACAGATAAAA+TGG 0.318808 1_3:+34428630 Msa0115560:intron
TGCAAAAGTAGGTTGGTTTA+GGG 0.319202 1_3:+34429192 Msa0115560:CDS
TGTCTAGGAACTTTGCTTGA+TGG 0.323557 1_3:+34430271 Msa0115560:intron
CTTCCTCCATCTTTGATGCT+TGG 0.327393 1_3:+34426747 Msa0115560:CDS
CACTGCCGAAGAACACTTGC+AGG 0.334877 1_3:-34428851 None:intergenic
GCTCGGACCAGGTTGATTAT+TGG 0.339372 1_3:-34426394 None:intergenic
CAGGTTGGCTCTGCATTTGA+TGG 0.340581 1_3:+34426071 Msa0115560:intron
CACCATTGGAATTAGAAATT+CGG 0.346379 1_3:-34426452 None:intergenic
AGCTTCCAACTTCTTGTAGA+AGG 0.347975 1_3:-34430365 None:intergenic
AATATGCTAATCGAATTATA+TGG 0.357516 1_3:+34433685 Msa0115560:three_prime_UTR
GCAACTCCTCAAAGTTGCTT+TGG 0.369209 1_3:-34431742 None:intergenic
TCCTCGACTAACGGTTGTTT+GGG 0.372223 1_3:-34429016 None:intergenic
ATAGCTTGATCTTCAGTAGT+TGG 0.372539 1_3:-34432553 None:intergenic
CTAATCGAATTATATGGTTT+AGG 0.374503 1_3:+34433691 Msa0115560:three_prime_UTR
CGAATCAGAATGGTGGGATC+AGG 0.374903 1_3:+34426721 Msa0115560:CDS
GCTGCTTCTGAAAGGAATTC+AGG 0.375573 1_3:+34426224 Msa0115560:CDS
ATTGATCGAGCTCATAGAAT+TGG 0.376291 1_3:+34432574 Msa0115560:CDS
GAAAAGGACGGGGAAAAGTT+TGG 0.380861 1_3:+34429052 Msa0115560:CDS
TACAGTTGAAGATAGAATAT+TGG 0.382555 1_3:+34432639 Msa0115560:CDS
AAAAGAAGGTGGTGCTTGTC+TGG 0.385925 1_3:+34429289 Msa0115560:CDS
TGCGAGGGACAGAGCTGTTA+AGG 0.386134 1_3:+34432148 Msa0115560:CDS
ATGTGCTCTTGTAGGTGGTT+GGG 0.388007 1_3:+34425932 Msa0115560:CDS
GATCAATCTGTTTAATAGTC+TGG 0.392290 1_3:+34430788 Msa0115560:CDS
AGAATCAAAACGACATAGAT+AGG 0.392397 1_3:-34423656 None:intergenic
AAATATTCAGAGTGCACATC+TGG 0.395770 1_3:+34432008 Msa0115560:CDS
TGTACTCACTGTTCTGTACT+AGG 0.396558 1_3:-34431821 None:intergenic
CTGCAAGTGTTCTTCGGCAG+TGG 0.399264 1_3:+34428852 Msa0115560:CDS
TGATGGTTCTATTTCTAGGT+TGG 0.399857 1_3:+34426088 Msa0115560:CDS
TCATCAATGGTATTCTGAAT+AGG 0.400698 1_3:-34429316 None:intergenic
CAGTGAATCTCTATTGCCTT+CGG 0.400819 1_3:-34431922 None:intergenic
AATACCTGATGTCTCATTAG+AGG 0.401255 1_3:-34428292 None:intergenic
AGATAGAATATTGGCTCTAC+AGG 0.403717 1_3:+34432648 Msa0115560:CDS
GTGATCCGTGTCACAGTAAC+AGG 0.411769 1_3:-34432607 None:intergenic
TCAAGGAAATCGGAGTGAAT+AGG 0.412633 1_3:-34423796 None:intergenic
TGAATCAAAATCTTCAATAT+CGG 0.413189 1_3:-34431958 None:intergenic
CCTAAGGCTGGAGCAAGCTC+TGG 0.413231 1_3:-34429263 None:intergenic
AGTGAATCTCTATTGCCTTC+GGG 0.416076 1_3:-34431921 None:intergenic
GGAGTAGGACCTAGCACATC+TGG 0.416344 1_3:+34426642 Msa0115560:CDS
CAAGGAAATCGGAGTGAATA+GGG 0.417364 1_3:-34423795 None:intergenic
AGATTGATCAGCATCTCCTT+TGG 0.419161 1_3:-34430774 None:intergenic
CAGAGCTTGCTCCAGCCTTA+GGG 0.421331 1_3:+34429264 Msa0115560:CDS
GTCAAATACAGGAGACTTGA+TGG 0.424033 1_3:+34432110 Msa0115560:CDS
ATCATCATCATCCAAATTCA+AGG 0.426949 1_3:-34428687 None:intergenic
CAGCATAAGGATCATACTTC+AGG 0.428885 1_3:-34429360 None:intergenic
TCAACAGAATCTTTCCCAAC+AGG 0.429310 1_3:-34430735 None:intergenic
GTAGAAGGCCCGCTCCTCAT+AGG 0.430281 1_3:-34430350 None:intergenic
GATGGTTCTATTTCTAGGTT+GGG 0.431235 1_3:+34426089 Msa0115560:CDS
CTTTCAGAAGCAGCCCATCT+TGG 0.431602 1_3:-34426215 None:intergenic
AAAATGGTGGCATCTGCATT+TGG 0.431781 1_3:+34433379 Msa0115560:CDS
AAAGGTAGGAAGGGATTAGA+TGG 0.436702 1_3:+34429142 Msa0115560:CDS
ATATCCAGAAATTCTATTCA+AGG 0.436994 1_3:+34429418 Msa0115560:CDS
TCGCCAAATTTCACCAGCAC+TGG 0.442207 1_3:-34433887 None:intergenic
TTCATTGTAAAGAACAACTT+GGG 0.444221 1_3:+34431703 Msa0115560:CDS
TGGTAGTATTGATGTGGAAA+AGG 0.445155 1_3:+34428715 Msa0115560:CDS
ACCATTGGAATTAGAAATTC+GGG 0.448176 1_3:-34426451 None:intergenic
GTGCTTCCATTGCTCGGACC+AGG 0.448588 1_3:-34426405 None:intergenic
TGTTCTTTACAATGAACTGC+AGG 0.451989 1_3:-34431696 None:intergenic
AGCAATCTGGCGTCAAATAC+AGG 0.452070 1_3:+34432099 Msa0115560:CDS
CTCAAACGATAAAGAATCAT+AGG 0.453758 1_3:+34429230 Msa0115560:CDS
GGAGGATGATATTGATGAAA+AGG 0.456198 1_3:+34429036 Msa0115560:CDS
GCTATATAATGGAAGTAAGA+AGG 0.460022 1_3:+34429114 Msa0115560:CDS
CGCCAAATTTCACCAGCACT+GGG 0.463213 1_3:-34433886 None:intergenic
TTTCTCATAACCGGCACCAT+TGG 0.465345 1_3:-34426466 None:intergenic
AATATAATTCTGATCCTGTT+GGG 0.465695 1_3:+34430721 Msa0115560:CDS
ATCTTTGGAGAGGAAATTGA+AGG 0.466688 1_3:-34423740 None:intergenic
TTCAAAACCTTACACAAAAG+TGG 0.466852 1_3:+34425968 Msa0115560:CDS
TATGTGCTCTTGTAGGTGGT+TGG 0.470245 1_3:+34425931 Msa0115560:CDS
AATGATTTATACACAGCATA+AGG 0.470686 1_3:-34429373 None:intergenic
GCTTTAAGCTACCTAGCAGT+TGG 0.471541 1_3:-34433658 None:intergenic
TTGCAGGCATATGCAGCTGC+TGG 0.472343 1_3:+34430615 Msa0115560:intron
ATTTCAGATCAACATTGGTA+TGG 0.472537 1_3:+34433489 Msa0115560:three_prime_UTR
TCTGCCCTGCAAGTGTTCTT+CGG 0.476335 1_3:+34428846 Msa0115560:CDS
GTGGACTAGCATGTTGGACT+TGG 0.476758 1_3:+34432061 Msa0115560:CDS
AAAGAAGCTGATTTACCTGC+TGG 0.477068 1_3:+34428256 Msa0115560:CDS
TTCTAGGTTGGGCAACGAAA+GGG 0.477557 1_3:+34426100 Msa0115560:CDS
TGGAGACTATGTGCTCTTGT+AGG 0.479611 1_3:+34425924 Msa0115560:CDS
GAAGGTTGATTTCTCCTATG+AGG 0.479926 1_3:+34430336 Msa0115560:CDS
TGGGAAAGATTCTGTTGAAA+TGG 0.482246 1_3:+34430740 Msa0115560:CDS
AGAGAGCTTGATGAGAAAGT+TGG 0.483880 1_3:+34428878 Msa0115560:CDS
CTGGGAGGATTCTTCCAAGA+TGG 0.484682 1_3:+34426201 Msa0115560:CDS
TCTGCGTACCGTTCTGGAGC+AGG 0.485246 1_3:+34426807 Msa0115560:CDS
AGTTGTAAATTGAAGACTCC+TGG 0.487683 1_3:+34431885 Msa0115560:CDS
TGACTTGTGCTTCCATTGCT+CGG 0.489521 1_3:-34426411 None:intergenic
TAGTTCGTCGGACGATGAGT+TGG 0.489567 1_3:+34426163 Msa0115560:CDS
CACAGGCCCCAGGTAGGAAA+AGG 0.493320 1_3:+34428801 Msa0115560:CDS
GAATATAATTCTGATCCTGT+TGG 0.494306 1_3:+34430720 Msa0115560:CDS
AGTTGCCTCTGTGACGATCT+TGG 0.495610 1_3:+34431759 Msa0115560:CDS
ATGATATTGATGAAAAGGAC+GGG 0.495663 1_3:+34429041 Msa0115560:CDS
GAGACATCAATGGAGCAATC+TGG 0.496744 1_3:+34432086 Msa0115560:CDS
TTGGAGGTGATTGTAGATCC+TGG 0.498865 1_3:+34426182 Msa0115560:CDS
TATTGATCATAATGTGGAGC+TGG 0.498904 1_3:+34433833 Msa0115560:three_prime_UTR
AAGAATTGAGGCGGGAATCA+AGG 0.500291 1_3:-34423813 None:intergenic
GAGGCGGGAATCAAGGAAAT+CGG 0.503952 1_3:-34423806 None:intergenic
TGATTTCTCCTATGAGGAGC+GGG 0.509422 1_3:+34430342 Msa0115560:CDS
TGCAAGTGTTCTTCGGCAGT+GGG 0.509603 1_3:+34428853 Msa0115560:CDS
CACATCTGGAGGACCACTAA+AGG 0.513599 1_3:+34432022 Msa0115560:CDS
TTCTCAGTGGACTAGCATGT+TGG 0.514207 1_3:+34432055 Msa0115560:CDS
AAGGCCAGCTGCTGGTACAC+TGG 0.515179 1_3:+34428820 Msa0115560:CDS
GCCTTTCCAAGCATCAAAGA+TGG 0.516458 1_3:-34426753 None:intergenic
TTCTGGAGCAGGTGATGAAA+GGG 0.516566 1_3:+34426818 Msa0115560:CDS
TCCATCTTTGATGCTTGGAA+AGG 0.517451 1_3:+34426752 Msa0115560:CDS
TCCCGAATTTCTAATTCCAA+TGG 0.518955 1_3:+34426450 Msa0115560:CDS
ATCAACATTGGTATGGATGA+TGG 0.520065 1_3:+34433496 Msa0115560:three_prime_UTR
CAAGCCAATGCTTGATAATG+TGG 0.520836 1_3:+34425881 Msa0115560:exon
ACCTAGCACATCTGGTGAGA+AGG 0.521088 1_3:+34426650 Msa0115560:CDS
TTGTCCACATTATCAAGCAT+TGG 0.521854 1_3:-34425885 None:intergenic
TCACTAAAAGCAGGAAACCT+TGG 0.522451 1_3:+34432478 Msa0115560:CDS
ACAATATTATCGACTCAACT+TGG 0.524986 1_3:+34425904 Msa0115560:CDS
TATATTCTTTAACAAGAAGC+GGG 0.526456 1_3:-34430704 None:intergenic
TATTATGTACAGATTCAAGA+AGG 0.526786 1_3:+34426316 Msa0115560:intron
GCGGGCCTTCTACAAGAAGT+TGG 0.526893 1_3:+34430360 Msa0115560:CDS
TCTTTATAATATTCTCTGCA+TGG 0.528318 1_3:+34433764 Msa0115560:three_prime_UTR
CTTTAAGCTACCTAGCAGTT+GGG 0.529494 1_3:-34433657 None:intergenic
GCGCTCTTGCAAAAGTAGGT+TGG 0.530031 1_3:+34429185 Msa0115560:CDS
ATGCTGGCGGTTCTGGAACT+CGG 0.531077 1_3:+34433410 Msa0115560:CDS
GAGCCAACGATAGATTGTTA+AGG 0.532964 1_3:+34433795 Msa0115560:three_prime_UTR
GGTTTAGGATGATATTACCT+TGG 0.533665 1_3:+34433706 Msa0115560:three_prime_UTR
ATTGTATTTCAGATCAACAT+TGG 0.535278 1_3:+34433484 Msa0115560:three_prime_UTR
GCATACAAGAATCGTCATCA+TGG 0.535825 1_3:+34426621 Msa0115560:CDS
GATGGCTCTTCTTTCGATTG+CGG 0.537917 1_3:+34429160 Msa0115560:CDS
GTACCAGATGATTGAAAAGA+TGG 0.539039 1_3:-34426525 None:intergenic
TTCGTCGGACGATGAGTTGG+AGG 0.539395 1_3:+34426166 Msa0115560:CDS
TCAAATTATTGATCATAATG+TGG 0.539557 1_3:+34433827 Msa0115560:three_prime_UTR
CTATATAATGGAAGTAAGAA+GGG 0.539807 1_3:+34429115 Msa0115560:CDS
ATAATGCTACGTCGTACAAA+AGG 0.541045 1_3:+34429472 Msa0115560:CDS
TGGGAGGATTCTTCCAAGAT+GGG 0.542766 1_3:+34426202 Msa0115560:CDS
CAGTAGTTGGATTCCACCAA+AGG 0.544822 1_3:-34432540 None:intergenic
TTTCTAGGTTGGGCAACGAA+AGG 0.544856 1_3:+34426099 Msa0115560:CDS
ATTTCTAATTCCAATGGTGC+CGG 0.545046 1_3:+34426456 Msa0115560:CDS
GGTGGCGCTCTTGCAAAAGT+AGG 0.546852 1_3:+34429181 Msa0115560:CDS
GTTCTGGAGCAGGTGATGAA+AGG 0.546993 1_3:+34426817 Msa0115560:CDS
AAATAGTTATCTAGATTACA+TGG 0.547848 1_3:+34426124 Msa0115560:CDS
CGCATTGATAACAGAAGACA+TGG 0.550770 1_3:-34431638 None:intergenic
TGTACCTCTAATGAGACATC+AGG 0.551258 1_3:+34428288 Msa0115560:CDS
ACAACCAGTGTACCAGCAGC+TGG 0.551867 1_3:-34428824 None:intergenic
TGTGGAGTTATGAAGGTGTA+TGG 0.551870 1_3:+34433551 Msa0115560:three_prime_UTR
ACTTCACATTTAGCTTCCGA+TGG 0.553101 1_3:+34433523 Msa0115560:three_prime_UTR
GTAGCTATATAAATCATCAA+TGG 0.553564 1_3:-34429329 None:intergenic
CCTAGCACATCTGGTGAGAA+GGG 0.554518 1_3:+34426651 Msa0115560:CDS
TGGAGGTGATTGTAGATCCT+GGG 0.556404 1_3:+34426183 Msa0115560:CDS
GGACTTGGTCGAGACATCAA+TGG 0.556406 1_3:+34432076 Msa0115560:CDS
TTATATTCTTTAACAAGAAG+CGG 0.557473 1_3:-34430705 None:intergenic
ATGCTGATGTCACTAAAAGC+AGG 0.559813 1_3:+34432469 Msa0115560:CDS
TAAAACAATTAATCTGGAGA+AGG 0.560183 1_3:+34430318 Msa0115560:CDS
GGCTCTGTGTGGAGTTATGA+AGG 0.560486 1_3:+34433544 Msa0115560:three_prime_UTR
GGTAGGAAAAGGCCAGCTGC+TGG 0.562826 1_3:+34428812 Msa0115560:CDS
GTTCATTGTAAAGAACAACT+TGG 0.563332 1_3:+34431702 Msa0115560:CDS
ATGATTGAAAAGATGGTGGA+AGG 0.564345 1_3:-34426518 None:intergenic
CAAGATGGGCTGCTTCTGAA+AGG 0.564924 1_3:+34426216 Msa0115560:CDS
ACACCTTAACAATCTATCGT+TGG 0.565617 1_3:-34433798 None:intergenic
AATCAACCTGGTCCGAGCAA+TGG 0.566425 1_3:+34426399 Msa0115560:CDS
CCAAATTTCACCAGCACTGG+GGG 0.567337 1_3:-34433884 None:intergenic
GTGAATCTCTATTGCCTTCG+GGG 0.568781 1_3:-34431920 None:intergenic
GTACTCACTGTTCTGTACTA+GGG 0.569675 1_3:-34431820 None:intergenic
AGAGTGAAATTGAACCTGAA+AGG 0.570800 1_3:-34423837 None:intergenic
GGCTCTTCTTTCGATTGCGG+TGG 0.571687 1_3:+34429163 Msa0115560:CDS
ATCGAAATAACAGAGTCATC+AGG 0.572260 1_3:-34431609 None:intergenic
GAATCAGAATGGTGGGATCA+GGG 0.574020 1_3:+34426722 Msa0115560:CDS
GATGATATTGATGAAAAGGA+CGG 0.575241 1_3:+34429040 Msa0115560:CDS
AAAAGGTTTGATCTTTGGAG+AGG 0.576265 1_3:-34423750 None:intergenic
AGACTATGTGCTCTTGTAGG+TGG 0.578440 1_3:+34425927 Msa0115560:CDS
CTCGTCCTGTTACTGTGACA+CGG 0.583353 1_3:+34432602 Msa0115560:CDS
ATATCATCCTCCTCGACTAA+CGG 0.583591 1_3:-34429025 None:intergenic
GCATTTGGCGAAGACCATGC+TGG 0.584437 1_3:+34433394 Msa0115560:CDS
AAGAATCGTCATCATGGAGT+AGG 0.586195 1_3:+34426627 Msa0115560:CDS
GGTACAGACATTATACCAGC+AGG 0.590038 1_3:-34428271 None:intergenic
GACTCTGTTATTTCGATGTG+TGG 0.590515 1_3:+34431615 Msa0115560:CDS
AAGGAAACTGTAATGCGGCT+CGG 0.590799 1_3:+34425854 Msa0115560:five_prime_UTR
CGGCAACCATATTTAAACCA+AGG 0.591292 1_3:-34432495 None:intergenic
GATCGTTTCACGAATCAGAA+TGG 0.593273 1_3:+34426711 Msa0115560:CDS
TGCCTCTGTGACGATCTTGG+TGG 0.594445 1_3:+34431762 Msa0115560:CDS
TGAAAGGAAAGAATTGAGGC+GGG 0.594608 1_3:-34423821 None:intergenic
AACCTGAAAGGAAAGAATTG+AGG 0.595448 1_3:-34423825 None:intergenic
GGATTTCAATACTGATCCTG+AGG 0.595725 1_3:+34432169 Msa0115560:CDS
CCCTTCTCACCAGATGTGCT+AGG 0.595968 1_3:-34426651 None:intergenic
CGTTTCACGAATCAGAATGG+TGG 0.597491 1_3:+34426714 Msa0115560:CDS
GTTTCACGAATCAGAATGGT+GGG 0.599820 1_3:+34426715 Msa0115560:CDS
ATAACTCCACACAGAGCCAT+CGG 0.600554 1_3:-34433539 None:intergenic
AAAGAATCATAGGACTCAGA+TGG 0.603963 1_3:+34429240 Msa0115560:CDS
AGTAGTTCAACACAGGCCCC+AGG 0.608515 1_3:+34428791 Msa0115560:CDS
TGATTGAAAAGATGGTGGAA+GGG 0.609027 1_3:-34426517 None:intergenic
TTGGATGATGATGATGAGAA+TGG 0.612698 1_3:+34428695 Msa0115560:CDS
TCTACTTCAAAACGCAGTAA+CGG 0.613580 1_3:-34423690 None:intergenic
GCTTCAGCTTTATGGTTGCG+TGG 0.616461 1_3:-34428665 None:intergenic
CTGAAAGGAAAGAATTGAGG+CGG 0.617406 1_3:-34423822 None:intergenic
AATACAGGAGACTTGATGGT+AGG 0.619105 1_3:+34432114 Msa0115560:CDS
GGGGCCTGTGTTGAACTACT+CGG 0.619233 1_3:-34428788 None:intergenic
ATTATGTACAGATTCAAGAA+GGG 0.619950 1_3:+34426317 Msa0115560:intron
GATTCACTAGAACTAGCAAA+CGG 0.621045 1_3:-34426786 None:intergenic
AAAACAAAGAAGTTACTACA+TGG 0.624136 1_3:-34433608 None:intergenic
GAGTTCCAGAACCGCCAGCA+TGG 0.626039 1_3:-34433408 None:intergenic
TATTCAGAGTGCACATCTGG+AGG 0.626253 1_3:+34432011 Msa0115560:CDS
GTGTATATATATTAGTTCGT+CGG 0.627656 1_3:+34426151 Msa0115560:CDS
TTGATTTCTCCTATGAGGAG+CGG 0.628332 1_3:+34430341 Msa0115560:CDS
ACAACCTATTTGCTAAATGG+AGG 0.628425 1_3:-34425826 None:intergenic
TAAAATCAAAGCTGTCCTTG+AGG 0.629967 1_3:+34431851 Msa0115560:CDS
CATCTTGGAAGAATCCTCCC+AGG 0.631366 1_3:-34426200 None:intergenic
GTTCTTTACAATGAACTGCA+GGG 0.633934 1_3:-34431695 None:intergenic
ACTGCCGAAGAACACTTGCA+GGG 0.634815 1_3:-34428850 None:intergenic
TCAATATCGGAATCATCAGA+AGG 0.635062 1_3:-34431945 None:intergenic
TTAGGTGCAAATGACGAAGG+TGG 0.636052 1_3:-34426558 None:intergenic
ACAACATACGCAAGGTCACA+TGG 0.638369 1_3:-34433859 None:intergenic
CCAGATGATTGAAAAGATGG+TGG 0.645944 1_3:-34426522 None:intergenic
TAGGATGACTCTTACTGCGA+GGG 0.647232 1_3:+34432133 Msa0115560:CDS
TCCCAAACAACCGTTAGTCG+AGG 0.649684 1_3:+34429015 Msa0115560:CDS
TGAGAATGGTAGTATTGATG+TGG 0.651173 1_3:+34428709 Msa0115560:CDS
TGATATTGATGAAAAGGACG+GGG 0.652087 1_3:+34429042 Msa0115560:CDS
TTTCATCACCTGCTCCAGAA+CGG 0.653042 1_3:-34426815 None:intergenic
GTTAAGCCCAATAATCAACC+TGG 0.653811 1_3:+34426387 Msa0115560:CDS
AGAAGAAAGTACATAAACCA+AGG 0.654744 1_3:-34433723 None:intergenic
CAAAAGAATAACATGACATG+CGG 0.657977 1_3:-34432515 None:intergenic
GAAATAACAGAGTCATCAGG+TGG 0.658456 1_3:-34431606 None:intergenic
GCCAAATTTCACCAGCACTG+GGG 0.659737 1_3:-34433885 None:intergenic
TTTCCAAGCATCAAAGATGG+AGG 0.662100 1_3:-34426750 None:intergenic
TGAATCTCTATTGCCTTCGG+GGG 0.663579 1_3:-34431919 None:intergenic
GCGGGTGATCACAAGCCTGA+CGG 0.667422 1_3:-34430686 None:intergenic
AACTTGACTGCAGAACCTCA+AGG 0.667843 1_3:-34431866 None:intergenic
CAAACAACCGTTAGTCGAGG+AGG 0.667934 1_3:+34429018 Msa0115560:CDS
TTTGGCGAAGACCATGCTGG+CGG 0.671173 1_3:+34433397 Msa0115560:CDS
TAGCTTCCGATGGCTCTGTG+TGG 0.679854 1_3:+34433533 Msa0115560:three_prime_UTR
TCATTGTAAAGAACAACTTG+GGG 0.686210 1_3:+34431704 Msa0115560:CDS
TTATTAGGTGCAAATGACGA+AGG 0.688311 1_3:-34426561 None:intergenic
TTGTTAAGGAAACTGTAATG+CGG 0.688880 1_3:+34425849 Msa0115560:five_prime_UTR
GTAGGATGACTCTTACTGCG+AGG 0.690531 1_3:+34432132 Msa0115560:CDS
TGAACTTGCAAAATATGATG+TGG 0.692648 1_3:+34428958 Msa0115560:CDS
GTTCAACACAGGCCCCAGGT+AGG 0.695205 1_3:+34428795 Msa0115560:CDS
AGGTGATTGTAGATCCTGGG+AGG 0.700899 1_3:+34426186 Msa0115560:CDS
TCTGAAATACAATTGTAACA+AGG 0.700905 1_3:-34433474 None:intergenic
TCACTAGAACTAGCAAACGG+TGG 0.718383 1_3:-34426783 None:intergenic
TGAACCGAGTAGTTCAACAC+AGG 0.722104 1_3:+34428784 Msa0115560:CDS
TACCACCAAGATCGTCACAG+AGG 0.755206 1_3:-34431764 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATTATTATTATTATTT+TGG + chr1_3:34427610-34427629 Msa0115560:intron 0.0%
!! AACAATATTATATTTCTTTA+TGG - chr1_3:34430120-34430139 None:intergenic 10.0%
!! TAAAGAAATATAATATTGTT+TGG + chr1_3:34430120-34430139 Msa0115560:intron 10.0%
!!! TTAAATTATTTTATTTGTCT+AGG + chr1_3:34430256-34430275 Msa0115560:intron 10.0%
!!! TTTTCGTTTATAAATTTAAA+AGG - chr1_3:34433033-34433052 None:intergenic 10.0%
!! ATTATAGACATTAAAAAATC+TGG - chr1_3:34425646-34425665 None:intergenic 15.0%
!!! TAAATTTTAACGTTCAAAAA+GGG + chr1_3:34425786-34425805 Msa0115560:five_prime_UTR 15.0%
!! TTATAAAGAAATTTCATTAC+AGG - chr1_3:34426273-34426292 None:intergenic 15.0%
!! AAGTTATTTAATCTGTTATT+AGG - chr1_3:34426579-34426598 None:intergenic 15.0%
!!! AAACAATTTTAATAACTGAT+GGG - chr1_3:34427308-34427327 None:intergenic 15.0%
!!! AAAACAATTTTAATAACTGA+TGG - chr1_3:34427309-34427328 None:intergenic 15.0%
!!! ATTAAAATTGTTTTTATCAG+AGG + chr1_3:34427315-34427334 Msa0115560:intron 15.0%
!!! AAATATTGTTTTTTTTTAGC+AGG + chr1_3:34427377-34427396 Msa0115560:intron 15.0%
!!! AATATTGTTTTTTTTTAGCA+GGG + chr1_3:34427378-34427397 Msa0115560:intron 15.0%
!!! TCATTTATTAAGTTTTTTTG+TGG - chr1_3:34428048-34428067 None:intergenic 15.0%
!!! TTTTTTCTTTTTTCATAATC+TGG + chr1_3:34429498-34429517 Msa0115560:intron 15.0%
!!! TAGAAATTTGTTTTGATATT+GGG + chr1_3:34430493-34430512 Msa0115560:intron 15.0%
!! TGATATGATAATTTCATTAT+TGG + chr1_3:34430855-34430874 Msa0115560:intron 15.0%
!!! TAGTTATAGGATATATTTTA+GGG + chr1_3:34431264-34431283 Msa0115560:intron 15.0%
!!! TAATAATTGTTGTTTGAAAA+AGG + chr1_3:34431353-34431372 Msa0115560:intron 15.0%
!!! AGTTTAATTTTTATTTCATG+TGG + chr1_3:34432684-34432703 Msa0115560:intron 15.0%
!! CTTGAACAATATTAAAATCA+GGG - chr1_3:34424035-34424054 None:intergenic 20.0%
!! ACTTGAACAATATTAAAATC+AGG - chr1_3:34424036-34424055 None:intergenic 20.0%
!! AGATTTAATTGTAGAAAAGA+TGG + chr1_3:34424615-34424634 Msa0115560:intron 20.0%
!! ATAAATGATTTGATTATGTG+TGG + chr1_3:34424650-34424669 Msa0115560:intron 20.0%
!!! TTATGAAATTATTTTCCATG+TGG - chr1_3:34424815-34424834 None:intergenic 20.0%
!! ATGGAAAATAATTTCATAAG+AGG + chr1_3:34424816-34424835 Msa0115560:intron 20.0%
!!! ATTTCTTTAATTTGTGTACA+AGG - chr1_3:34425407-34425426 None:intergenic 20.0%
!! ATAATATTGCAATTCATGTT+AGG + chr1_3:34425457-34425476 Msa0115560:intron 20.0%
!! ATTTCAATTATATTCACCTT+GGG + chr1_3:34425510-34425529 Msa0115560:intron 20.0%
!! ACAACCAATATAAAGTTAAA+GGG - chr1_3:34425590-34425609 None:intergenic 20.0%
!! TACAACCAATATAAAGTTAA+AGG - chr1_3:34425591-34425610 None:intergenic 20.0%
!!! TTATATTGGTTGTATTTCTA+TGG + chr1_3:34425597-34425616 Msa0115560:intron 20.0%
!!! GTAAATTTTAACGTTCAAAA+AGG + chr1_3:34425785-34425804 Msa0115560:five_prime_UTR 20.0%
!!! AAATTTTAACGTTCAAAAAG+GGG + chr1_3:34425787-34425806 Msa0115560:five_prime_UTR 20.0%
!! AAATAGTTATCTAGATTACA+TGG + chr1_3:34426124-34426143 Msa0115560:CDS 20.0%
!! TCAAAAAAAGAGATTTGAAA+TGG - chr1_3:34426990-34427009 None:intergenic 20.0%
!!! TTTTGTTTCTTCTTAGTTTT+TGG + chr1_3:34427184-34427203 Msa0115560:intron 20.0%
!! GTTCAAGCTTAATAAAAAAA+AGG - chr1_3:34427250-34427269 None:intergenic 20.0%
!!! AAAAACAATATTTTCTGACA+TGG - chr1_3:34427370-34427389 None:intergenic 20.0%
!!! TTTCTGTTTTGATTTTTCAT+GGG + chr1_3:34428912-34428931 Msa0115560:CDS 20.0%
!!! ATGATTTATATAGCTACTTT+AGG + chr1_3:34429335-34429354 Msa0115560:CDS 20.0%
!! AAACTTATCAAAATTATGGA+AGG - chr1_3:34429825-34429844 None:intergenic 20.0%
!! AGCTAAACTTATCAAAATTA+TGG - chr1_3:34429829-34429848 None:intergenic 20.0%
!! ATTAACACCAAATAAATACT+TGG - chr1_3:34429876-34429895 None:intergenic 20.0%
!!! ATTTTCTTGTTTTTGAATGA+TGG + chr1_3:34430002-34430021 Msa0115560:intron 20.0%
!! ATTCGTTAAAAAAGAAATCA+AGG - chr1_3:34430056-34430075 None:intergenic 20.0%
!!! TTTCTTTTTTAACGAATCTA+TGG + chr1_3:34430059-34430078 Msa0115560:intron 20.0%
!! AAATTCATTATTATACACGA+TGG - chr1_3:34430085-34430104 None:intergenic 20.0%
!! ATCGTGTATAATAATGAATT+TGG + chr1_3:34430084-34430103 Msa0115560:intron 20.0%
!! TCGTGTATAATAATGAATTT+GGG + chr1_3:34430085-34430104 Msa0115560:intron 20.0%
!! GTTAAGATAAGCAATATAAA+AGG - chr1_3:34430420-34430439 None:intergenic 20.0%
!! TTATATTGCTTATCTTAACT+TGG + chr1_3:34430421-34430440 Msa0115560:intron 20.0%
!!! CTAGAAATTTGTTTTGATAT+TGG + chr1_3:34430492-34430511 Msa0115560:intron 20.0%
!! TTATATTCTTTAACAAGAAG+CGG - chr1_3:34430708-34430727 None:intergenic 20.0%
!!! GTAGTTATAGGATATATTTT+AGG + chr1_3:34431263-34431282 Msa0115560:intron 20.0%
!!! AGTTATAGGATATATTTTAG+GGG + chr1_3:34431265-34431284 Msa0115560:intron 20.0%
!! ATCAACAAATTGATAAATCA+GGG - chr1_3:34431436-34431455 None:intergenic 20.0%
!! AATCAACAAATTGATAAATC+AGG - chr1_3:34431437-34431456 None:intergenic 20.0%
!! TGAATCAAAATCTTCAATAT+CGG - chr1_3:34431961-34431980 None:intergenic 20.0%
!! ATTAAACTAATACCAGAAAT+TGG + chr1_3:34432363-34432382 Msa0115560:intron 20.0%
!! AATATGCTAATCGAATTATA+TGG + chr1_3:34433685-34433704 Msa0115560:three_prime_UTR 20.0%
!! TCAAATTATTGATCATAATG+TGG + chr1_3:34433827-34433846 Msa0115560:three_prime_UTR 20.0%
!!! AATGTTTTATAGAAACCTAT+GGG - chr1_3:34433944-34433963 None:intergenic 20.0%
!! ATGTGATTTAAACTGATTAA+TGG + chr1_3:34433971-34433990 Msa0115560:three_prime_UTR 20.0%
!! CATTTGTTAAACTGTTACAT+GGG + chr1_3:34423928-34423947 Msa0115560:intron 25.0%
! AAATCATACTTAGACTGATA+GGG - chr1_3:34424176-34424195 None:intergenic 25.0%
! AAAATCATACTTAGACTGAT+AGG - chr1_3:34424177-34424196 None:intergenic 25.0%
!!! AACCAAGACTTTTTTTAACA+AGG - chr1_3:34424753-34424772 None:intergenic 25.0%
!! ATAAAGTTGCCAATTTTACA+AGG - chr1_3:34424909-34424928 None:intergenic 25.0%
!!! GAAACTATTTTGTTTGGAAT+TGG - chr1_3:34424954-34424973 None:intergenic 25.0%
! AGTTTCAGAGAAATGAAAAT+CGG + chr1_3:34425301-34425320 Msa0115560:intron 25.0%
! AATATTATAAATCCTACCCA+TGG - chr1_3:34425445-34425464 None:intergenic 25.0%
! TTGAAATCTTACTCAGAATT+GGG - chr1_3:34425497-34425516 None:intergenic 25.0%
! ATTGAAATCTTACTCAGAAT+TGG - chr1_3:34425498-34425517 None:intergenic 25.0%
! GATTTCAATTATATTCACCT+TGG + chr1_3:34425509-34425528 Msa0115560:intron 25.0%
!! ATGTCCCTTTAACTTTATAT+TGG + chr1_3:34425583-34425602 Msa0115560:intron 25.0%
!! ATGTCTATAATGAATCCTTT+TGG + chr1_3:34425655-34425674 Msa0115560:intron 25.0%
!!! AATTTTAACGTTCAAAAAGG+GGG + chr1_3:34425788-34425807 Msa0115560:five_prime_UTR 25.0%
! GTGTATATATATTAGTTCGT+CGG + chr1_3:34426151-34426170 Msa0115560:CDS 25.0%
! TATTATGTACAGATTCAAGA+AGG + chr1_3:34426316-34426335 Msa0115560:intron 25.0%
! ATTATGTACAGATTCAAGAA+GGG + chr1_3:34426317-34426336 Msa0115560:intron 25.0%
! TTTGAGTAAGCATGTAAATA+CGG - chr1_3:34426908-34426927 None:intergenic 25.0%
! GAAAGAATATTCTGTTTGTT+AGG + chr1_3:34426935-34426954 Msa0115560:intron 25.0%
!!! TTCAAATCTCTTTTTTTGAG+AGG + chr1_3:34426991-34427010 Msa0115560:intron 25.0%
! GCATATATGATTCACAATTA+AGG - chr1_3:34427049-34427068 None:intergenic 25.0%
!! CTTCTAAGAAAGAAAAAAAG+AGG - chr1_3:34427217-34427236 None:intergenic 25.0%
!!! CTCTTTTTTTCTTTCTTAGA+AGG + chr1_3:34427215-34427234 Msa0115560:intron 25.0%
! TGTTAATACTGAAACCATAA+GGG + chr1_3:34427818-34427837 Msa0115560:intron 25.0%
!! TTTTGTATTTTCAATCCTAG+AGG - chr1_3:34427937-34427956 None:intergenic 25.0%
!!! CTACGGTTACTATTTTAAAT+GGG - chr1_3:34427976-34427995 None:intergenic 25.0%
!!! TCTACGGTTACTATTTTAAA+TGG - chr1_3:34427977-34427996 None:intergenic 25.0%
! TTATTATCATCGAGAGTTAT+TGG + chr1_3:34428181-34428200 Msa0115560:intron 25.0%
! TATTATCATCGAGAGTTATT+GGG + chr1_3:34428182-34428201 Msa0115560:intron 25.0%
! TTTATAACCTTGTTCAAACA+GGG + chr1_3:34428566-34428585 Msa0115560:intron 25.0%
!!! CTTTCTGTTTTGATTTTTCA+TGG + chr1_3:34428911-34428930 Msa0115560:CDS 25.0%
!!! TTCTGTTTTGATTTTTCATG+GGG + chr1_3:34428913-34428932 Msa0115560:CDS 25.0%
!! CTTTTTATTGCCAGAAAAAT+CGG - chr1_3:34429086-34429105 None:intergenic 25.0%
!!! ATTTTTCTGGCAATAAAAAG+AGG + chr1_3:34429086-34429105 Msa0115560:CDS 25.0%
! AAGAGGAAAAAGCTATATAA+TGG + chr1_3:34429103-34429122 Msa0115560:CDS 25.0%
!! CTATATAATGGAAGTAAGAA+GGG + chr1_3:34429115-34429134 Msa0115560:CDS 25.0%
! GTAGCTATATAAATCATCAA+TGG - chr1_3:34429332-34429351 None:intergenic 25.0%
! AATGATTTATACACAGCATA+AGG - chr1_3:34429376-34429395 None:intergenic 25.0%
!! GAATAGAATTTCTGGATATT+GGG - chr1_3:34429417-34429436 None:intergenic 25.0%
!! TGAATAGAATTTCTGGATAT+TGG - chr1_3:34429418-34429437 None:intergenic 25.0%
! ATATCCAGAAATTCTATTCA+AGG + chr1_3:34429418-34429437 Msa0115560:CDS 25.0%
!!! AATTTTGATAAGTTTAGCTG+AGG + chr1_3:34429830-34429849 Msa0115560:intron 25.0%
!!! ATTTTGATAAGTTTAGCTGA+GGG + chr1_3:34429831-34429850 Msa0115560:intron 25.0%
! AATATAATATTGTTTGGCTG+AGG + chr1_3:34430126-34430145 Msa0115560:intron 25.0%
! ATATAATATTGTTTGGCTGA+GGG + chr1_3:34430127-34430146 Msa0115560:intron 25.0%
!! TTCTCCAGATTAATTGTTTT+AGG - chr1_3:34430319-34430338 None:intergenic 25.0%
! TAAAACAATTAATCTGGAGA+AGG + chr1_3:34430318-34430337 Msa0115560:CDS 25.0%
!! TTCTAGACACTAATTTTGAA+GGG - chr1_3:34430478-34430497 None:intergenic 25.0%
!! TTTCTAGACACTAATTTTGA+AGG - chr1_3:34430479-34430498 None:intergenic 25.0%
! TCATTTCAGAACTACAAATT+TGG - chr1_3:34430584-34430603 None:intergenic 25.0%
! TATATTCTTTAACAAGAAGC+GGG - chr1_3:34430707-34430726 None:intergenic 25.0%
! AATATAATTCTGATCCTGTT+GGG + chr1_3:34430721-34430740 Msa0115560:CDS 25.0%
! TTGTAAGATATGCAATCAAA+AGG - chr1_3:34430926-34430945 None:intergenic 25.0%
! AATAACATAACATGTACCAT+AGG - chr1_3:34430960-34430979 None:intergenic 25.0%
! TTTGTCTAATGAATGATATC+AGG + chr1_3:34430978-34430997 Msa0115560:intron 25.0%
!! ATAACTACTTTATGATGATG+TGG - chr1_3:34431251-34431270 None:intergenic 25.0%
! CATCATCATAAAGTAGTTAT+AGG + chr1_3:34431251-34431270 Msa0115560:intron 25.0%
!!! GTTATAGGATATATTTTAGG+GGG + chr1_3:34431266-34431285 Msa0115560:intron 25.0%
!!! TTATAGGATATATTTTAGGG+GGG + chr1_3:34431267-34431286 Msa0115560:intron 25.0%
! GTTTATTCAGATGAAGATAA+AGG + chr1_3:34431378-34431397 Msa0115560:intron 25.0%
! ATGAAGATAAAGGATTTCAA+GGG + chr1_3:34431388-34431407 Msa0115560:intron 25.0%
! AAATAAAATTCCAGACATTC+AGG - chr1_3:34431495-34431514 None:intergenic 25.0%
! ATTTATACTATGGTTTCAAC+AGG + chr1_3:34431581-34431600 Msa0115560:intron 25.0%
! TTCATTGTAAAGAACAACTT+GGG + chr1_3:34431703-34431722 Msa0115560:CDS 25.0%
! GAAAAAATTATAGCCTTTAG+TGG - chr1_3:34432038-34432057 None:intergenic 25.0%
!! TTACAGCTTTAACAATATTG+GGG - chr1_3:34432204-34432223 None:intergenic 25.0%
!! GTTACAGCTTTAACAATATT+GGG - chr1_3:34432205-34432224 None:intergenic 25.0%
!! AGTTACAGCTTTAACAATAT+TGG - chr1_3:34432206-34432225 None:intergenic 25.0%
!! AAAAAGCAGATTTAACTTCT+CGG - chr1_3:34432302-34432321 None:intergenic 25.0%
!! TAAACCTAGATTTTCTTTGT+TGG + chr1_3:34432409-34432428 Msa0115560:intron 25.0%
!! ATCTTCAACTGTATCTTTTA+TGG - chr1_3:34432632-34432651 None:intergenic 25.0%
! TACAGTTGAAGATAGAATAT+TGG + chr1_3:34432639-34432658 Msa0115560:CDS 25.0%
! AGCAATGATAGAAAAAGAAA+GGG - chr1_3:34432837-34432856 None:intergenic 25.0%
!!! GTTGAAAGATGACTTTTTTT+TGG + chr1_3:34433061-34433080 Msa0115560:intron 25.0%
!!! TTTTTTTGGCATTCTTTTCA+AGG + chr1_3:34433075-34433094 Msa0115560:intron 25.0%
!!! TTTTTTGGCATTCTTTTCAA+GGG + chr1_3:34433076-34433095 Msa0115560:intron 25.0%
!!! AGTGTTTTTTCTTGCTTTTA+TGG + chr1_3:34433219-34433238 Msa0115560:intron 25.0%
!!! GTGTTTTTTCTTGCTTTTAT+GGG + chr1_3:34433220-34433239 Msa0115560:intron 25.0%
!!! TTCTGATGTTATTTTTGTGT+TGG + chr1_3:34433330-34433349 Msa0115560:intron 25.0%
!!! TGATCTGAAATATCTTTTCA+TGG + chr1_3:34433444-34433463 Msa0115560:CDS 25.0%
!! TCTGAAATACAATTGTAACA+AGG - chr1_3:34433477-34433496 None:intergenic 25.0%
! ATTGTATTTCAGATCAACAT+TGG + chr1_3:34433484-34433503 Msa0115560:three_prime_UTR 25.0%
! AAAACAAAGAAGTTACTACA+TGG - chr1_3:34433611-34433630 None:intergenic 25.0%
! CTAATCGAATTATATGGTTT+AGG + chr1_3:34433691-34433710 Msa0115560:three_prime_UTR 25.0%
! TCTTTATAATATTCTCTGCA+TGG + chr1_3:34433764-34433783 Msa0115560:three_prime_UTR 25.0%
!!! TTTTAGAACAATAAACCCAT+AGG + chr1_3:34433926-34433945 Msa0115560:three_prime_UTR 25.0%
!! GAATGTTTTATAGAAACCTA+TGG - chr1_3:34433945-34433964 None:intergenic 25.0%
AGAATCAAAACGACATAGAT+AGG - chr1_3:34423659-34423678 None:intergenic 30.0%
TGTGAAAAAGGTTTGATCTT+TGG - chr1_3:34423758-34423777 None:intergenic 30.0%
ATTAGCGAAATGTGTGAAAA+AGG - chr1_3:34423770-34423789 None:intergenic 30.0%
! GCATTTGTTAAACTGTTACA+TGG + chr1_3:34423927-34423946 Msa0115560:intron 30.0%
TTGCAAGGATTGATTGATTA+AGG + chr1_3:34423961-34423980 Msa0115560:intron 30.0%
TGCAAGGATTGATTGATTAA+GGG + chr1_3:34423962-34423981 Msa0115560:intron 30.0%
!! TATTGGGTTTGTTTCTATGA+GGG + chr1_3:34423987-34424006 Msa0115560:intron 30.0%
!!! TTTGTTTCTATGAGGGTTTT+TGG + chr1_3:34423994-34424013 Msa0115560:intron 30.0%
ATAGCATACACATTAGGAAA+AGG + chr1_3:34424134-34424153 Msa0115560:intron 30.0%
TAGCATACACATTAGGAAAA+GGG + chr1_3:34424135-34424154 Msa0115560:intron 30.0%
!!! AGACTTTTTTTAACAAGGTC+TGG - chr1_3:34424748-34424767 None:intergenic 30.0%
GACCTTGTTAAAAAAAGTCT+TGG + chr1_3:34424748-34424767 Msa0115560:intron 30.0%
AAATCATCATTGTTTCCACA+TGG + chr1_3:34424797-34424816 Msa0115560:intron 30.0%
! ACATGGGAAACTATTTTGTT+TGG - chr1_3:34424960-34424979 None:intergenic 30.0%
AATAGTTTCCCATGTTGAAT+TGG + chr1_3:34424965-34424984 Msa0115560:intron 30.0%
CAATTTCACCAATTCAACAT+GGG - chr1_3:34424976-34424995 None:intergenic 30.0%
GAGCAAGTTCTGTTTATTTA+AGG + chr1_3:34425129-34425148 Msa0115560:intron 30.0%
! AAGCAGCATTGAATTGAATT+GGG - chr1_3:34425337-34425356 None:intergenic 30.0%
! AAAGCAGCATTGAATTGAAT+TGG - chr1_3:34425338-34425357 None:intergenic 30.0%
!! TGCTTTTACTTCTTTTTAGC+CGG + chr1_3:34425352-34425371 Msa0115560:intron 30.0%
AATTTGTGTACAAGGAGTTT+GGG - chr1_3:34425399-34425418 None:intergenic 30.0%
! TAATTTGTGTACAAGGAGTT+TGG - chr1_3:34425400-34425419 None:intergenic 30.0%
!! ATCTAGAAAGTATTGTTCCA+TGG + chr1_3:34425425-34425444 Msa0115560:intron 30.0%
!! TCTAGAAAGTATTGTTCCAT+GGG + chr1_3:34425426-34425445 Msa0115560:intron 30.0%
TGAAATCTTACTCAGAATTG+GGG - chr1_3:34425496-34425515 None:intergenic 30.0%
AAAGTTAAAGGGACATAGAA+AGG - chr1_3:34425579-34425598 None:intergenic 30.0%
! TGGTTGTATTTCTATGGAAA+AGG + chr1_3:34425603-34425622 Msa0115560:intron 30.0%
TGAAGCACATCAAAAGAAAA+CGG - chr1_3:34425726-34425745 None:intergenic 30.0%
! TTCAGGTTATACTCATGATT+TGG + chr1_3:34425742-34425761 Msa0115560:intron 30.0%
ATTTCCTCCATTTAGCAAAT+AGG + chr1_3:34425822-34425841 Msa0115560:five_prime_UTR 30.0%
! CAAACAACCTATTTGCTAAA+TGG - chr1_3:34425832-34425851 None:intergenic 30.0%
! AGCAAATAGGTTGTTTGTTA+AGG + chr1_3:34425835-34425854 Msa0115560:five_prime_UTR 30.0%
TTGTTAAGGAAACTGTAATG+CGG + chr1_3:34425849-34425868 Msa0115560:five_prime_UTR 30.0%
!! ACAATATTATCGACTCAACT+TGG + chr1_3:34425904-34425923 Msa0115560:CDS 30.0%
TTCAAAACCTTACACAAAAG+TGG + chr1_3:34425968-34425987 Msa0115560:CDS 30.0%
AAACCTTCGCTAAATGAAAA+TGG - chr1_3:34426003-34426022 None:intergenic 30.0%
!! TCATGATACTTTTTGACTAC+AGG + chr1_3:34426052-34426071 Msa0115560:intron 30.0%
! CATTTGATGGTTCTATTTCT+AGG + chr1_3:34426084-34426103 Msa0115560:CDS 30.0%
ACCATTGGAATTAGAAATTC+GGG - chr1_3:34426454-34426473 None:intergenic 30.0%
CACCATTGGAATTAGAAATT+CGG - chr1_3:34426455-34426474 None:intergenic 30.0%
! AGATGACATTTTCTCATAAC+CGG - chr1_3:34426478-34426497 None:intergenic 30.0%
! TTTTCAATCATCTGGTACAA+GGG + chr1_3:34426530-34426549 Msa0115560:CDS 30.0%
AATTTATGAAGCAGCATTAC+AGG + chr1_3:34426863-34426882 Msa0115560:CDS 30.0%
!! TTCTGTTTGTTAGGTTTTAG+TGG + chr1_3:34426944-34426963 Msa0115560:intron 30.0%
!!! AAATCTCTTTTTTTGAGAGG+AGG + chr1_3:34426994-34427013 Msa0115560:intron 30.0%
TTTAGAAACCTGTGATAGTT+GGG + chr1_3:34427113-34427132 Msa0115560:intron 30.0%
! AATATTTTCTGACATGGCAA+CGG - chr1_3:34427364-34427383 None:intergenic 30.0%
AGGTTCTCTATTAGTTACTT+CGG + chr1_3:34427439-34427458 Msa0115560:intron 30.0%
TGTTTGTGAACATGTGATTT+AGG + chr1_3:34427787-34427806 Msa0115560:intron 30.0%
GTTTGTGAACATGTGATTTA+GGG + chr1_3:34427788-34427807 Msa0115560:intron 30.0%
TTTGTGAACATGTGATTTAG+GGG + chr1_3:34427789-34427808 Msa0115560:intron 30.0%
CTTATGGTTTCAGTATTAAC+AGG - chr1_3:34427819-34427838 None:intergenic 30.0%
CTGTTAATACTGAAACCATA+AGG + chr1_3:34427817-34427836 Msa0115560:intron 30.0%
AGAATTGTTGTAGTTGAGAT+AGG - chr1_3:34427884-34427903 None:intergenic 30.0%
GTATTATTATCCCATACACT+TGG - chr1_3:34428013-34428032 None:intergenic 30.0%
TTCTGCATCAATATGATATG+TGG + chr1_3:34428113-34428132 Msa0115560:intron 30.0%
! GGTAAATCAGCTTCTTTTAA+TGG - chr1_3:34428253-34428272 None:intergenic 30.0%
TAAGAGCAGTTATGATAGAT+AGG - chr1_3:34428322-34428341 None:intergenic 30.0%
!!! GTGCAATTTTCTGGAATATA+AGG - chr1_3:34428409-34428428 None:intergenic 30.0%
TATATTCCAGAAAATTGCAC+TGG + chr1_3:34428409-34428428 Msa0115560:intron 30.0%
CTTTATAACCTTGTTCAAAC+AGG + chr1_3:34428565-34428584 Msa0115560:intron 30.0%
AAAGGCAATCACAGATAAAA+TGG + chr1_3:34428630-34428649 Msa0115560:intron 30.0%
ATCATCATCATCCAAATTCA+AGG - chr1_3:34428690-34428709 None:intergenic 30.0%
! AGTAATAGGTTTTGCATCAT+TGG - chr1_3:34428765-34428784 None:intergenic 30.0%
!!! TCTGTTTTGATTTTTCATGG+GGG + chr1_3:34428914-34428933 Msa0115560:CDS 30.0%
! TCATATTTTGCAAGTTCAAC+AGG - chr1_3:34428956-34428975 None:intergenic 30.0%
TGAACTTGCAAAATATGATG+TGG + chr1_3:34428958-34428977 Msa0115560:CDS 30.0%
GATGATATTGATGAAAAGGA+CGG + chr1_3:34429040-34429059 Msa0115560:CDS 30.0%
ATGATATTGATGAAAAGGAC+GGG + chr1_3:34429041-34429060 Msa0115560:CDS 30.0%
! GCTATATAATGGAAGTAAGA+AGG + chr1_3:34429114-34429133 Msa0115560:CDS 30.0%
CTCAAACGATAAAGAATCAT+AGG + chr1_3:34429230-34429249 Msa0115560:CDS 30.0%
TCATCAATGGTATTCTGAAT+AGG - chr1_3:34429319-34429338 None:intergenic 30.0%
GTAACCTTGAATAGAATTTC+TGG - chr1_3:34429425-34429444 None:intergenic 30.0%
! AAAAACTTCAAGCAGTTTTG+AGG + chr1_3:34429446-34429465 Msa0115560:CDS 30.0%
!! AAAACTTCAAGCAGTTTTGA+GGG + chr1_3:34429447-34429466 Msa0115560:CDS 30.0%
! GTATGAATTTATCGTTTTCC+TGG + chr1_3:34429546-34429565 Msa0115560:intron 30.0%
GTCATGAACTTTAACTAAAG+AGG - chr1_3:34429616-34429635 None:intergenic 30.0%
CTTATCAAAATTATGGAAGG+TGG - chr1_3:34429822-34429841 None:intergenic 30.0%
AATATGTCTAGCATTCTGAT+GGG - chr1_3:34429931-34429950 None:intergenic 30.0%
AAATATGTCTAGCATTCTGA+TGG - chr1_3:34429932-34429951 None:intergenic 30.0%
!! TTGGTGTCATATTTACTGTA+TGG + chr1_3:34430201-34430220 Msa0115560:intron 30.0%
!! TGGTGTCATATTTACTGTAT+GGG + chr1_3:34430202-34430221 Msa0115560:intron 30.0%
!!! TCCAGATTAATTGTTTTAGG+AGG - chr1_3:34430316-34430335 None:intergenic 30.0%
TGATTCACGTTCTCAATTTA+AGG + chr1_3:34430387-34430406 Msa0115560:CDS 30.0%
! ATTGCTTATCTTAACTTGGT+TGG + chr1_3:34430425-34430444 Msa0115560:intron 30.0%
! ATCTGATATTTCTATGCTGA+TGG + chr1_3:34430551-34430570 Msa0115560:intron 30.0%
GAATATAATTCTGATCCTGT+TGG + chr1_3:34430720-34430739 Msa0115560:CDS 30.0%
GATCAATCTGTTTAATAGTC+TGG + chr1_3:34430788-34430807 Msa0115560:CDS 30.0%
TTCTAAGCATATGTTTACTC+TGG + chr1_3:34431051-34431070 Msa0115560:intron 30.0%
TCTAAGCATATGTTTACTCT+GGG + chr1_3:34431052-34431071 Msa0115560:intron 30.0%
!!! CGTCACATTATTAGTCTTTT+TGG + chr1_3:34431088-34431107 Msa0115560:intron 30.0%
TACACTTTGTTCACAAAATC+AGG + chr1_3:34431122-34431141 Msa0115560:intron 30.0%
! AAGAAAGTCATGGATTATGA+TGG + chr1_3:34431174-34431193 Msa0115560:intron 30.0%
ATGGAAACAAGTCAAAGTTA+AGG + chr1_3:34431193-34431212 Msa0115560:intron 30.0%
GATGAAGATAAAGGATTTCA+AGG + chr1_3:34431387-34431406 Msa0115560:intron 30.0%
TGAAGATAAAGGATTTCAAG+GGG + chr1_3:34431389-34431408 Msa0115560:intron 30.0%
! TAATTTTCTACCTGAATGTC+TGG + chr1_3:34431482-34431501 Msa0115560:intron 30.0%
TAGCTATGCATTGTCATTAA+GGG + chr1_3:34431549-34431568 Msa0115560:intron 30.0%
GTTCATTGTAAAGAACAACT+TGG + chr1_3:34431702-34431721 Msa0115560:CDS 30.0%
TCATTGTAAAGAACAACTTG+GGG + chr1_3:34431704-34431723 Msa0115560:CDS 30.0%
!!! AGATTTTGATTCAGATGTCA+AGG + chr1_3:34431968-34431987 Msa0115560:CDS 30.0%
!!! AGGCTATAATTTTTTCTCAG+TGG + chr1_3:34432042-34432061 Msa0115560:CDS 30.0%
CACAGTAATAATCCAATTTC+TGG - chr1_3:34432378-34432397 None:intergenic 30.0%
AGGAAACCTTGGTTTAAATA+TGG + chr1_3:34432489-34432508 Msa0115560:CDS 30.0%
CAAAAGAATAACATGACATG+CGG - chr1_3:34432518-34432537 None:intergenic 30.0%
! ATGTTATTCTTTTGGACCTT+TGG + chr1_3:34432524-34432543 Msa0115560:CDS 30.0%
TTATTTCATGTGGCAATATG+AGG + chr1_3:34432694-34432713 Msa0115560:intron 30.0%
CAGCAATGATAGAAAAAGAA+AGG - chr1_3:34432838-34432857 None:intergenic 30.0%
! TCTTTTTCTATCATTGCTGA+CGG + chr1_3:34432839-34432858 Msa0115560:intron 30.0%
AGGAAAGCAATAATGAGAAA+AGG - chr1_3:34433013-34433032 None:intergenic 30.0%
! AAATCCTTAGCCACTTTAAT+TGG + chr1_3:34433152-34433171 Msa0115560:intron 30.0%
CATTGAAATTAAAAGTTCCC+CGG - chr1_3:34433266-34433285 None:intergenic 30.0%
ATTTCAGATCAACATTGGTA+TGG + chr1_3:34433489-34433508 Msa0115560:three_prime_UTR 30.0%
! AGAAGAAAGTACATAAACCA+AGG - chr1_3:34433726-34433745 None:intergenic 30.0%
TCTACTTCAAAACGCAGTAA+CGG - chr1_3:34423693-34423712 None:intergenic 35.0%
! ATCTTTGGAGAGGAAATTGA+AGG - chr1_3:34423743-34423762 None:intergenic 35.0%
! AAAAGGTTTGATCTTTGGAG+AGG - chr1_3:34423753-34423772 None:intergenic 35.0%
AACCTGAAAGGAAAGAATTG+AGG - chr1_3:34423828-34423847 None:intergenic 35.0%
AGAGTGAAATTGAACCTGAA+AGG - chr1_3:34423840-34423859 None:intergenic 35.0%
GCAAGGATTGATTGATTAAG+GGG + chr1_3:34423963-34423982 Msa0115560:intron 35.0%
CAAGGATTGATTGATTAAGG+GGG + chr1_3:34423964-34423983 Msa0115560:intron 35.0%
! TTGATTGATTAAGGGGGTAT+TGG + chr1_3:34423970-34423989 Msa0115560:intron 35.0%
!! TGATTGATTAAGGGGGTATT+GGG + chr1_3:34423971-34423990 Msa0115560:intron 35.0%
!! GTATTGGGTTTGTTTCTATG+AGG + chr1_3:34423986-34424005 Msa0115560:intron 35.0%
!!! ACTAGGGTTTTTGAGTAGAT+TGG + chr1_3:34424096-34424115 Msa0115560:intron 35.0%
!!! CTAGGGTTTTTGAGTAGATT+GGG + chr1_3:34424097-34424116 Msa0115560:intron 35.0%
AGCATACACATTAGGAAAAG+GGG + chr1_3:34424136-34424155 Msa0115560:intron 35.0%
TAGGTGAAACAATTCATGGT+CGG - chr1_3:34424285-34424304 None:intergenic 35.0%
TTCCTAGGTGAAACAATTCA+TGG - chr1_3:34424289-34424308 None:intergenic 35.0%
TAGATAAGCTGTCATAGCAA+AGG + chr1_3:34424393-34424412 Msa0115560:intron 35.0%
TTCATATACTGCGTTTGCAA+TGG + chr1_3:34424438-34424457 Msa0115560:intron 35.0%
!!! TTGTCTCTGGTGGATTTTTT+TGG + chr1_3:34424471-34424490 Msa0115560:intron 35.0%
GTACTAATATCCCATGAATC+CGG + chr1_3:34424493-34424512 Msa0115560:intron 35.0%
TACTAATATCCCATGAATCC+GGG + chr1_3:34424494-34424513 Msa0115560:intron 35.0%
CGCGATTTACCTTGTAAAAT+TGG + chr1_3:34424897-34424916 Msa0115560:intron 35.0%
GCAATTTCACCAATTCAACA+TGG - chr1_3:34424977-34424996 None:intergenic 35.0%
TTGAATTGGTGAAATTGCCT+GGG + chr1_3:34424979-34424998 Msa0115560:intron 35.0%
ACCAAAATTTCGATTTACCC+AGG - chr1_3:34424999-34425018 None:intergenic 35.0%
TGGTGAAATCTTCAATTCGT+TGG + chr1_3:34425015-34425034 Msa0115560:intron 35.0%
TTGAATGACAAACCCTATTC+AGG + chr1_3:34425079-34425098 Msa0115560:intron 35.0%
TGAATGACAAACCCTATTCA+GGG + chr1_3:34425080-34425099 Msa0115560:intron 35.0%
! TAAACAGAACTTGCTCACAA+GGG - chr1_3:34425125-34425144 None:intergenic 35.0%
! ATAAACAGAACTTGCTCACA+AGG - chr1_3:34425126-34425145 None:intergenic 35.0%
! GTTTGTTTGTGATGGTGAAA+AGG + chr1_3:34425209-34425228 Msa0115560:intron 35.0%
!!! AAGGCACTCATTTTTTGAGA+CGG + chr1_3:34425238-34425257 Msa0115560:intron 35.0%
!! TTTTACTTCTTTTTAGCCGG+TGG + chr1_3:34425355-34425374 Msa0115560:intron 35.0%
TAAAATGTTGTTGCTACCCA+AGG - chr1_3:34425529-34425548 None:intergenic 35.0%
! GGGTAGCAACAACATTTTAT+TGG + chr1_3:34425530-34425549 Msa0115560:intron 35.0%
! GTTTTCTTTTGATGTGCTTC+AGG + chr1_3:34425725-34425744 Msa0115560:intron 35.0%
! ACAACCTATTTGCTAAATGG+AGG - chr1_3:34425829-34425848 None:intergenic 35.0%
TTGTCCACATTATCAAGCAT+TGG - chr1_3:34425888-34425907 None:intergenic 35.0%
!! TAACTCACCACTTTTGTGTA+AGG - chr1_3:34425978-34425997 None:intergenic 35.0%
! ACACCATTTTCATTTAGCGA+AGG + chr1_3:34425997-34426016 Msa0115560:intron 35.0%
!! GATACTTTTTGACTACAGGT+TGG + chr1_3:34426056-34426075 Msa0115560:intron 35.0%
!! TGATGGTTCTATTTCTAGGT+TGG + chr1_3:34426088-34426107 Msa0115560:CDS 35.0%
!! GATGGTTCTATTTCTAGGTT+GGG + chr1_3:34426089-34426108 Msa0115560:CDS 35.0%
TCCCGAATTTCTAATTCCAA+TGG + chr1_3:34426450-34426469 Msa0115560:CDS 35.0%
ATTTCTAATTCCAATGGTGC+CGG + chr1_3:34426456-34426475 Msa0115560:CDS 35.0%
! CATCTCAACAAGCTTTTAAC+AGG + chr1_3:34426493-34426512 Msa0115560:CDS 35.0%
!! TGATTGAAAAGATGGTGGAA+GGG - chr1_3:34426520-34426539 None:intergenic 35.0%
!! ATGATTGAAAAGATGGTGGA+AGG - chr1_3:34426521-34426540 None:intergenic 35.0%
GTACCAGATGATTGAAAAGA+TGG - chr1_3:34426528-34426547 None:intergenic 35.0%
! CTTTTCAATCATCTGGTACA+AGG + chr1_3:34426529-34426548 Msa0115560:CDS 35.0%
TTATTAGGTGCAAATGACGA+AGG - chr1_3:34426564-34426583 None:intergenic 35.0%
!!! GGCTTTTTTCGTGACAATTT+TGG + chr1_3:34426672-34426691 Msa0115560:CDS 35.0%
GATTCACTAGAACTAGCAAA+CGG - chr1_3:34426789-34426808 None:intergenic 35.0%
! ATTAGTCTCTCATCAGTTTC+AGG - chr1_3:34426846-34426865 None:intergenic 35.0%
CAACTATCACAGGTTTCTAA+AGG - chr1_3:34427114-34427133 None:intergenic 35.0%
! CTTTAGAAACCTGTGATAGT+TGG + chr1_3:34427112-34427131 Msa0115560:intron 35.0%
ATGTAGTGCATGTGGATATT+TGG + chr1_3:34427146-34427165 Msa0115560:intron 35.0%
TGTAGTGCATGTGGATATTT+GGG + chr1_3:34427147-34427166 Msa0115560:intron 35.0%
TGCATTAATGTCTGTGATAC+AGG + chr1_3:34427741-34427760 Msa0115560:intron 35.0%
!! TTGTGCCATTTGTGTTTCAT+GGG - chr1_3:34427909-34427928 None:intergenic 35.0%
!! TTTGTGCCATTTGTGTTTCA+TGG - chr1_3:34427910-34427929 None:intergenic 35.0%
AATGGCACAAAAATACCTCT+AGG + chr1_3:34427919-34427938 Msa0115560:intron 35.0%
AATACCTGATGTCTCATTAG+AGG - chr1_3:34428295-34428314 None:intergenic 35.0%
! TAATGAGACATCAGGTATTG+CGG + chr1_3:34428296-34428315 Msa0115560:intron 35.0%
AATTCAAGGCTTCAGCTTTA+TGG - chr1_3:34428676-34428695 None:intergenic 35.0%
TAAAGCTGAAGCCTTGAATT+TGG + chr1_3:34428676-34428695 Msa0115560:CDS 35.0%
! TTGGATGATGATGATGAGAA+TGG + chr1_3:34428695-34428714 Msa0115560:CDS 35.0%
!! TGAGAATGGTAGTATTGATG+TGG + chr1_3:34428709-34428728 Msa0115560:CDS 35.0%
!! TGGTAGTATTGATGTGGAAA+AGG + chr1_3:34428715-34428734 Msa0115560:CDS 35.0%
GGAGGATGATATTGATGAAA+AGG + chr1_3:34429036-34429055 Msa0115560:CDS 35.0%
TGATATTGATGAAAAGGACG+GGG + chr1_3:34429042-34429061 Msa0115560:CDS 35.0%
TTTATTGCCAGAAAAATCGG+AGG - chr1_3:34429083-34429102 None:intergenic 35.0%
GGAAGTAAGAAGGGTAAAAA+AGG + chr1_3:34429124-34429143 Msa0115560:CDS 35.0%
GTAAGAAGGGTAAAAAAGGT+AGG + chr1_3:34429128-34429147 Msa0115560:CDS 35.0%
AAGGGTAAAAAAGGTAGGAA+GGG + chr1_3:34429133-34429152 Msa0115560:CDS 35.0%
!! TTGCAAAAGTAGGTTGGTTT+AGG + chr1_3:34429191-34429210 Msa0115560:CDS 35.0%
!! TGCAAAAGTAGGTTGGTTTA+GGG + chr1_3:34429192-34429211 Msa0115560:CDS 35.0%
AAAGAATCATAGGACTCAGA+TGG + chr1_3:34429240-34429259 Msa0115560:CDS 35.0%
! TTTTGTACGACGTAGCATTA+TGG - chr1_3:34429473-34429492 None:intergenic 35.0%
ATAATGCTACGTCGTACAAA+AGG + chr1_3:34429472-34429491 Msa0115560:CDS 35.0%
CTTAAAACCTAAATCAAGCC+AGG - chr1_3:34429567-34429586 None:intergenic 35.0%
AGACTTGACATCATTACAAC+TGG - chr1_3:34429741-34429760 None:intergenic 35.0%
GTCGACACCAAGTATTTATT+TGG + chr1_3:34429866-34429885 Msa0115560:intron 35.0%
!!! AGCCTGATTTTCTTTGAAGT+TGG + chr1_3:34430182-34430201 Msa0115560:intron 35.0%
CACCAACTTCAAAGAAAATC+AGG - chr1_3:34430187-34430206 None:intergenic 35.0%
! GGTGTCATATTTACTGTATG+GGG + chr1_3:34430203-34430222 Msa0115560:intron 35.0%
GTGTCATATTTACTGTATGG+GGG + chr1_3:34430204-34430223 Msa0115560:intron 35.0%
TTAGGAGGCAAAGTGATTAT+AGG - chr1_3:34430301-34430320 None:intergenic 35.0%
GCCTCCTAAAACAATTAATC+TGG + chr1_3:34430312-34430331 Msa0115560:CDS 35.0%
AATGAATGCTTGTACTTTGC+AGG + chr1_3:34430599-34430618 Msa0115560:intron 35.0%
TGGGAAAGATTCTGTTGAAA+TGG + chr1_3:34430740-34430759 Msa0115560:CDS 35.0%
AATGGCAAAAAAGCTTCCAA+AGG + chr1_3:34430758-34430777 Msa0115560:CDS 35.0%
! GATCTATACCGGATGTTTTA+AGG - chr1_3:34430904-34430923 None:intergenic 35.0%
GCAATCAAAAGGATCTATAC+CGG - chr1_3:34430915-34430934 None:intergenic 35.0%
TACAAGTCTTACTCTTCCTA+TGG + chr1_3:34430941-34430960 Msa0115560:intron 35.0%
GTCTAATGAATGATATCAGG+AGG + chr1_3:34430981-34431000 Msa0115560:intron 35.0%
CCATGACTTTCTTACAATGA+AGG - chr1_3:34431167-34431186 None:intergenic 35.0%
CCTTCATTGTAAGAAAGTCA+TGG + chr1_3:34431164-34431183 Msa0115560:intron 35.0%
TGTGCTACATAAAATACCCA+TGG - chr1_3:34431300-34431319 None:intergenic 35.0%
GAAGATAAAGGATTTCAAGG+GGG + chr1_3:34431390-34431409 Msa0115560:intron 35.0%
AAGATAAAGGATTTCAAGGG+GGG + chr1_3:34431391-34431410 Msa0115560:intron 35.0%
GTAGCTATGCATTGTCATTA+AGG + chr1_3:34431548-34431567 Msa0115560:intron 35.0%
ATCGAAATAACAGAGTCATC+AGG - chr1_3:34431612-34431631 None:intergenic 35.0%
GTTCTTTACAATGAACTGCA+GGG - chr1_3:34431698-34431717 None:intergenic 35.0%
TGTTCTTTACAATGAACTGC+AGG - chr1_3:34431699-34431718 None:intergenic 35.0%
! TTTTCTCCAAAGCAACTTTG+AGG + chr1_3:34431736-34431755 Msa0115560:CDS 35.0%
TAAAATCAAAGCTGTCCTTG+AGG + chr1_3:34431851-34431870 Msa0115560:CDS 35.0%
AGTTGTAAATTGAAGACTCC+TGG + chr1_3:34431885-34431904 Msa0115560:CDS 35.0%
TCAATATCGGAATCATCAGA+AGG - chr1_3:34431948-34431967 None:intergenic 35.0%
AAATATTCAGAGTGCACATC+TGG + chr1_3:34432008-34432027 Msa0115560:CDS 35.0%
! AGCTTTAACAATATTGGGGA+TGG - chr1_3:34432200-34432219 None:intergenic 35.0%
GGTTCTTACATCACATTTCT+TGG - chr1_3:34432256-34432275 None:intergenic 35.0%
TACTTCAGCTACTAACAAAC+AGG - chr1_3:34432277-34432296 None:intergenic 35.0%
TCAGCCAACAAAGAAAATCT+AGG - chr1_3:34432416-34432435 None:intergenic 35.0%
! CGCATGTCATGTTATTCTTT+TGG + chr1_3:34432516-34432535 Msa0115560:CDS 35.0%
! TTATTCTTTTGGACCTTTGG+TGG + chr1_3:34432527-34432546 Msa0115560:CDS 35.0%
ATAGCTTGATCTTCAGTAGT+TGG - chr1_3:34432556-34432575 None:intergenic 35.0%
ATTGATCGAGCTCATAGAAT+TGG + chr1_3:34432574-34432593 Msa0115560:CDS 35.0%
!! AGATAGAATATTGGCTCTAC+AGG + chr1_3:34432648-34432667 Msa0115560:CDS 35.0%
! ATTTAGAGTCCCCAGTAATT+CGG + chr1_3:34432739-34432758 Msa0115560:intron 35.0%
! ATTGAGGTGATTTGTGAGTT+TGG + chr1_3:34432782-34432801 Msa0115560:intron 35.0%
! CTTTTTCTATCATTGCTGAC+GGG + chr1_3:34432840-34432859 Msa0115560:intron 35.0%
TGGTATTGTCAATCTACTGT+AGG - chr1_3:34432948-34432967 None:intergenic 35.0%
TTTATGAGATCAATGCCCAT+TGG - chr1_3:34433133-34433152 None:intergenic 35.0%
ATAACTCTTCCTGTATCGTT+TGG - chr1_3:34433192-34433211 None:intergenic 35.0%
!!! CGGGGAACTTTTAATTTCAA+TGG + chr1_3:34433264-34433283 Msa0115560:intron 35.0%
! TTTTTCTCTTTTCTTCCTGC+CGG - chr1_3:34433363-34433382 None:intergenic 35.0%
GCAGGAAGAAAAGAGAAAAA+TGG + chr1_3:34433363-34433382 Msa0115560:intron 35.0%
GGAAGAAAAGAGAAAAATGG+TGG + chr1_3:34433366-34433385 Msa0115560:intron 35.0%
ATCAACATTGGTATGGATGA+TGG + chr1_3:34433496-34433515 Msa0115560:three_prime_UTR 35.0%
!!! GAAGGTGTATGGCTATTTTT+TGG + chr1_3:34433562-34433581 Msa0115560:three_prime_UTR 35.0%
!!! GTGTATGGCTATTTTTTGGT+TGG + chr1_3:34433566-34433585 Msa0115560:three_prime_UTR 35.0%
! GGTTTAGGATGATATTACCT+TGG + chr1_3:34433706-34433725 Msa0115560:three_prime_UTR 35.0%
ACACCTTAACAATCTATCGT+TGG - chr1_3:34433801-34433820 None:intergenic 35.0%
TATTGATCATAATGTGGAGC+TGG + chr1_3:34433833-34433852 Msa0115560:three_prime_UTR 35.0%
CAAGGAAATCGGAGTGAATA+GGG - chr1_3:34423798-34423817 None:intergenic 40.0%
TCAAGGAAATCGGAGTGAAT+AGG - chr1_3:34423799-34423818 None:intergenic 40.0%
TGAAAGGAAAGAATTGAGGC+GGG - chr1_3:34423824-34423843 None:intergenic 40.0%
CTGAAAGGAAAGAATTGAGG+CGG - chr1_3:34423825-34423844 None:intergenic 40.0%
! TCACTCTGATCTGCTTTGTT+TGG + chr1_3:34423853-34423872 Msa0115560:intron 40.0%
! ATGGGTCATGCAATTTTGCA+AGG + chr1_3:34423946-34423965 Msa0115560:intron 40.0%
!!! GGGTTTTTGGCTGCATTATT+AGG + chr1_3:34424007-34424026 Msa0115560:intron 40.0%
TTATGTGTGTTCTCCTTACG+TGG + chr1_3:34424064-34424083 Msa0115560:intron 40.0%
TATGTGTGTTCTCCTTACGT+GGG + chr1_3:34424065-34424084 Msa0115560:intron 40.0%
TAGTAAACTTTCCCCACGTA+AGG - chr1_3:34424080-34424099 None:intergenic 40.0%
TTACGTGGGGAAAGTTTACT+AGG + chr1_3:34424079-34424098 Msa0115560:intron 40.0%
TACGTGGGGAAAGTTTACTA+GGG + chr1_3:34424080-34424099 Msa0115560:intron 40.0%
CTGCAGATAGCATACACATT+AGG + chr1_3:34424128-34424147 Msa0115560:intron 40.0%
ATTAGGAAAAGGGGAATGAG+TGG + chr1_3:34424145-34424164 Msa0115560:intron 40.0%
! CTCGTAATCTGGAGTTTAGT+CGG + chr1_3:34424235-34424254 Msa0115560:intron 40.0%
! TCGTAATCTGGAGTTTAGTC+GGG + chr1_3:34424236-34424255 Msa0115560:intron 40.0%
AGGTGAAACAATTCATGGTC+GGG - chr1_3:34424284-34424303 None:intergenic 40.0%
GACCATGAATTGTTTCACCT+AGG + chr1_3:34424284-34424303 Msa0115560:intron 40.0%
TGGACTGTTAATGTTGTCTC+TGG + chr1_3:34424458-34424477 Msa0115560:intron 40.0%
ACTGTTAATGTTGTCTCTGG+TGG + chr1_3:34424461-34424480 Msa0115560:intron 40.0%
TAAAAACACCGATAAGCAGC+AGG + chr1_3:34424683-34424702 Msa0115560:intron 40.0%
AAAAACACCGATAAGCAGCA+GGG + chr1_3:34424684-34424703 Msa0115560:intron 40.0%
!! TGGTTGCTGTTGTTCTCTTT+TGG + chr1_3:34424768-34424787 Msa0115560:intron 40.0%
CTCAGAATTAGTCAAGTGCT+GGG - chr1_3:34424852-34424871 None:intergenic 40.0%
CAGCACTTGACTAATTCTGA+GGG + chr1_3:34424851-34424870 Msa0115560:intron 40.0%
! GTTTGGAATTGGATAGCTCA+GGG - chr1_3:34424943-34424962 None:intergenic 40.0%
! TGTTTGGAATTGGATAGCTC+AGG - chr1_3:34424944-34424963 None:intergenic 40.0%
GTTGAATTGGTGAAATTGCC+TGG + chr1_3:34424978-34424997 Msa0115560:intron 40.0%
! GCCTGGGTAAATCGAAATTT+TGG + chr1_3:34424995-34425014 Msa0115560:intron 40.0%
ATAGGGTTTGTCATTCAACC+TGG - chr1_3:34425077-34425096 None:intergenic 40.0%
TCAGAGAAATGAAAATCGGC+CGG + chr1_3:34425305-34425324 Msa0115560:intron 40.0%
! AAATGAAAATCGGCCGGTTT+GGG + chr1_3:34425311-34425330 Msa0115560:intron 40.0%
!! GAAAGTATTGTTCCATGGGT+AGG + chr1_3:34425430-34425449 Msa0115560:intron 40.0%
ATCTTACTCAGAATTGGGGA+TGG - chr1_3:34425492-34425511 None:intergenic 40.0%
!! CAAGCCAATGCTTGATAATG+TGG + chr1_3:34425881-34425900 Msa0115560:exon 40.0%
GTTAAGCCCAATAATCAACC+TGG + chr1_3:34426387-34426406 Msa0115560:CDS 40.0%
CCAGATGATTGAAAAGATGG+TGG - chr1_3:34426525-34426544 None:intergenic 40.0%
! CCACCATCTTTTCAATCATC+TGG + chr1_3:34426522-34426541 Msa0115560:CDS 40.0%
GCATACAAGAATCGTCATCA+TGG + chr1_3:34426621-34426640 Msa0115560:CDS 40.0%
AAGAATCGTCATCATGGAGT+AGG + chr1_3:34426627-34426646 Msa0115560:CDS 40.0%
!! TTTCGTGACAATTTTGGCAG+AGG + chr1_3:34426678-34426697 Msa0115560:CDS 40.0%
!! AATTTTGGCAGAGGCAATGA+TGG + chr1_3:34426687-34426706 Msa0115560:CDS 40.0%
GATCGTTTCACGAATCAGAA+TGG + chr1_3:34426711-34426730 Msa0115560:CDS 40.0%
GTTTCACGAATCAGAATGGT+GGG + chr1_3:34426715-34426734 Msa0115560:CDS 40.0%
TTTCCAAGCATCAAAGATGG+AGG - chr1_3:34426753-34426772 None:intergenic 40.0%
TCCATCTTTGATGCTTGGAA+AGG + chr1_3:34426752-34426771 Msa0115560:CDS 40.0%
TAAACCTACCCAACTATCAC+AGG - chr1_3:34427124-34427143 None:intergenic 40.0%
! GGTTTAAGATGTAGTGCATG+TGG + chr1_3:34427138-34427157 Msa0115560:intron 40.0%
ACTCCTTTACATGCTAGACA+TGG + chr1_3:34427268-34427287 Msa0115560:intron 40.0%
GTACCATGTCTAGCATGTAA+AGG - chr1_3:34427274-34427293 None:intergenic 40.0%
CTGAAACCATAAGGGAAACT+TGG + chr1_3:34427826-34427845 Msa0115560:intron 40.0%
TCTAGCCCATGAAACACAAA+TGG + chr1_3:34427901-34427920 Msa0115560:intron 40.0%
TGGCAGATTACTGTCATCTA+CGG - chr1_3:34427993-34428012 None:intergenic 40.0%
ACAGTAATCTGCCAAGTGTA+TGG + chr1_3:34427999-34428018 Msa0115560:intron 40.0%
CAGTAATCTGCCAAGTGTAT+GGG + chr1_3:34428000-34428019 Msa0115560:intron 40.0%
TTATTGGGACACAATGTCAG+TGG + chr1_3:34428197-34428216 Msa0115560:intron 40.0%
CACAATGTCAGTGGTGAATT+TGG + chr1_3:34428206-34428225 Msa0115560:intron 40.0%
! AAAGAAGCTGATTTACCTGC+TGG + chr1_3:34428256-34428275 Msa0115560:CDS 40.0%
TGTACCTCTAATGAGACATC+AGG + chr1_3:34428288-34428307 Msa0115560:CDS 40.0%
AAACAGGAGTTTGCATTGCT+TGG + chr1_3:34428451-34428470 Msa0115560:intron 40.0%
AACAGGAGTTTGCATTGCTT+GGG + chr1_3:34428452-34428471 Msa0115560:intron 40.0%
TTGCTCTCATCCTAATGCAA+AGG + chr1_3:34428612-34428631 Msa0115560:intron 40.0%
TCTGTGATTGCCTTTGCATT+AGG - chr1_3:34428625-34428644 None:intergenic 40.0%
GAACTACTCGGTTCAGTAAT+AGG - chr1_3:34428779-34428798 None:intergenic 40.0%
AGAGAGCTTGATGAGAAAGT+TGG + chr1_3:34428878-34428897 Msa0115560:CDS 40.0%
ATATCATCCTCCTCGACTAA+CGG - chr1_3:34429028-34429047 None:intergenic 40.0%
GAAGGGTAAAAAAGGTAGGA+AGG + chr1_3:34429132-34429151 Msa0115560:CDS 40.0%
AAAGGTAGGAAGGGATTAGA+TGG + chr1_3:34429142-34429161 Msa0115560:CDS 40.0%
CAGCATAAGGATCATACTTC+AGG - chr1_3:34429363-34429382 None:intergenic 40.0%
!! TCGTTTTCCTGGCTTGATTT+AGG + chr1_3:34429557-34429576 Msa0115560:intron 40.0%
CTCATTTCCTTCTCTACCTT+TGG + chr1_3:34429663-34429682 Msa0115560:intron 40.0%
!! TTTAGCTGAGGGTTTTGTAG+TGG + chr1_3:34429842-34429861 Msa0115560:intron 40.0%
GCATTCTGATGGGAATTTCA+GGG - chr1_3:34429921-34429940 None:intergenic 40.0%
AGCATTCTGATGGGAATTTC+AGG - chr1_3:34429922-34429941 None:intergenic 40.0%
TACTGTATGGGGGTGATTAT+TGG + chr1_3:34430214-34430233 Msa0115560:intron 40.0%
TGTCTAGGAACTTTGCTTGA+TGG + chr1_3:34430271-34430290 Msa0115560:intron 40.0%
! GAAGGTTGATTTCTCCTATG+AGG + chr1_3:34430336-34430355 Msa0115560:CDS 40.0%
TTGATTTCTCCTATGAGGAG+CGG + chr1_3:34430341-34430360 Msa0115560:CDS 40.0%
AGCTTCCAACTTCTTGTAGA+AGG - chr1_3:34430368-34430387 None:intergenic 40.0%
TCAACAGAATCTTTCCCAAC+AGG - chr1_3:34430738-34430757 None:intergenic 40.0%
AGATTGATCAGCATCTCCTT+TGG - chr1_3:34430777-34430796 None:intergenic 40.0%
TTGTGCCTCCTTAAAACATC+CGG + chr1_3:34430893-34430912 Msa0115560:intron 40.0%
!!! CTATACCGGATGTTTTAAGG+AGG - chr1_3:34430901-34430920 None:intergenic 40.0%
! GTTTACTCTGGGCATGTTTT+AGG + chr1_3:34431063-34431082 Msa0115560:intron 40.0%
! GGAGTTCTAGTTGTTAGTTG+TGG + chr1_3:34431214-34431233 Msa0115560:intron 40.0%
TAGCACAATCCAAAACTACC+AGG + chr1_3:34431313-34431332 Msa0115560:intron 40.0%
CATAGCTACTGTTTACCACT+CGG - chr1_3:34431537-34431556 None:intergenic 40.0%
! GCTCTGGCTGATTTATACTA+TGG + chr1_3:34431571-34431590 Msa0115560:intron 40.0%
GAAATAACAGAGTCATCAGG+TGG - chr1_3:34431609-34431628 None:intergenic 40.0%
!! GACTCTGTTATTTCGATGTG+TGG + chr1_3:34431615-34431634 Msa0115560:CDS 40.0%
! CGCATTGATAACAGAAGACA+TGG - chr1_3:34431641-34431660 None:intergenic 40.0%
GTACTCACTGTTCTGTACTA+GGG - chr1_3:34431823-34431842 None:intergenic 40.0%
TGTACTCACTGTTCTGTACT+AGG - chr1_3:34431824-34431843 None:intergenic 40.0%
AGTGAATCTCTATTGCCTTC+GGG - chr1_3:34431924-34431943 None:intergenic 40.0%
CAGTGAATCTCTATTGCCTT+CGG - chr1_3:34431925-34431944 None:intergenic 40.0%
GTCAAATACAGGAGACTTGA+TGG + chr1_3:34432110-34432129 Msa0115560:CDS 40.0%
! AATACAGGAGACTTGATGGT+AGG + chr1_3:34432114-34432133 Msa0115560:CDS 40.0%
GGATTTCAATACTGATCCTG+AGG + chr1_3:34432169-34432188 Msa0115560:CDS 40.0%
TCAATACTGATCCTGAGGTT+TGG + chr1_3:34432174-34432193 Msa0115560:intron 40.0%
ATGCTGATGTCACTAAAAGC+AGG + chr1_3:34432469-34432488 Msa0115560:CDS 40.0%
TCACTAAAAGCAGGAAACCT+TGG + chr1_3:34432478-34432497 Msa0115560:CDS 40.0%
CGGCAACCATATTTAAACCA+AGG - chr1_3:34432498-34432517 None:intergenic 40.0%
AGAAAAGAATCCCCTCATGA+CGG - chr1_3:34432987-34433006 None:intergenic 40.0%
!! GGCATTCTTTTCAAGGGTTT+AGG + chr1_3:34433082-34433101 Msa0115560:intron 40.0%
GATCAAGTCATGTTCTTCCA+TGG + chr1_3:34433106-34433125 Msa0115560:intron 40.0%
ATGTTCTTCCATGGTCCAAT+GGG + chr1_3:34433115-34433134 Msa0115560:intron 40.0%
! CTTAGCCACTTTAATTGGCA+GGG + chr1_3:34433157-34433176 Msa0115560:intron 40.0%
! TTAGCCACTTTAATTGGCAG+GGG + chr1_3:34433158-34433177 Msa0115560:intron 40.0%
TTAGTGAGCTTTGCAATCTC+CGG + chr1_3:34433244-34433263 Msa0115560:intron 40.0%
!! TTTTTGTGTTGGCCTGTATC+CGG + chr1_3:34433341-34433360 Msa0115560:intron 40.0%
AAAATGGTGGCATCTGCATT+TGG + chr1_3:34433379-34433398 Msa0115560:CDS 40.0%
! ACTTCACATTTAGCTTCCGA+TGG + chr1_3:34433523-34433542 Msa0115560:three_prime_UTR 40.0%
! TGTGGAGTTATGAAGGTGTA+TGG + chr1_3:34433551-34433570 Msa0115560:three_prime_UTR 40.0%
!!! TATTTTTTGGTTGGCTGCTG+AGG + chr1_3:34433575-34433594 Msa0115560:three_prime_UTR 40.0%
!!! ATTTTTTGGTTGGCTGCTGA+GGG + chr1_3:34433576-34433595 Msa0115560:three_prime_UTR 40.0%
!!! TCTTTGTTTTGAAGCCCACA+AGG + chr1_3:34433621-34433640 Msa0115560:three_prime_UTR 40.0%
!!! CTTTGTTTTGAAGCCCACAA+GGG + chr1_3:34433622-34433641 Msa0115560:three_prime_UTR 40.0%
GAAGACAAAAATGCCCTTGT+GGG - chr1_3:34433638-34433657 None:intergenic 40.0%
! TTTTTGTCTTCCCAACTGCT+AGG + chr1_3:34433647-34433666 Msa0115560:three_prime_UTR 40.0%
CTTTAAGCTACCTAGCAGTT+GGG - chr1_3:34433660-34433679 None:intergenic 40.0%
GAGCCAACGATAGATTGTTA+AGG + chr1_3:34433795-34433814 Msa0115560:three_prime_UTR 40.0%
AGAGAGAGAGAGAGAGACTA+GGG - chr1_3:34423717-34423736 None:intergenic 45.0%
AAGAATTGAGGCGGGAATCA+AGG - chr1_3:34423816-34423835 None:intergenic 45.0%
CGCCTCAATTCTTTCCTTTC+AGG + chr1_3:34423823-34423842 Msa0115560:five_prime_UTR 45.0%
ATGTGTGTTCTCCTTACGTG+GGG + chr1_3:34424066-34424085 Msa0115560:intron 45.0%
CGACTAAACTCCAGATTACG+AGG - chr1_3:34424237-34424256 None:intergenic 45.0%
! AATCTGGAGTTTAGTCGGGT+CGG + chr1_3:34424240-34424259 Msa0115560:intron 45.0%
TTTCACCTAGGAATCAGACG+CGG + chr1_3:34424296-34424315 Msa0115560:intron 45.0%
TCGTACTTATCGTGCTCAAG+TGG - chr1_3:34424361-34424380 None:intergenic 45.0%
CCTCAGAATTAGTCAAGTGC+TGG - chr1_3:34424853-34424872 None:intergenic 45.0%
CCAGCACTTGACTAATTCTG+AGG + chr1_3:34424850-34424869 Msa0115560:intron 45.0%
GAGAGAAGAGACCCTGAATA+GGG - chr1_3:34425094-34425113 None:intergenic 45.0%
AGAGAGAAGAGACCCTGAAT+AGG - chr1_3:34425095-34425114 None:intergenic 45.0%
ACACAGACTTCTGAACGACA+CGG - chr1_3:34425171-34425190 None:intergenic 45.0%
GATGGTGAAAAGGAGAGCAA+AGG + chr1_3:34425219-34425238 Msa0115560:intron 45.0%
GAAATGAAAATCGGCCGGTT+TGG + chr1_3:34425310-34425329 Msa0115560:intron 45.0%
GAATTGAATTGGGCCCAAAC+CGG - chr1_3:34425327-34425346 None:intergenic 45.0%
!! TACTTCTTTTTAGCCGGTGG+AGG + chr1_3:34425358-34425377 Msa0115560:intron 45.0%
TCTCAGATACGTACGCCAAA+AGG - chr1_3:34425673-34425692 None:intergenic 45.0%
GCGTACGTATCTGAGAATTG+TGG + chr1_3:34425677-34425696 Msa0115560:intron 45.0%
CGTATCTGAGAATTGTGGCT+TGG + chr1_3:34425682-34425701 Msa0115560:intron 45.0%
AAGGAAACTGTAATGCGGCT+CGG + chr1_3:34425854-34425873 Msa0115560:five_prime_UTR 45.0%
TGGAGACTATGTGCTCTTGT+AGG + chr1_3:34425924-34425943 Msa0115560:CDS 45.0%
AGACTATGTGCTCTTGTAGG+TGG + chr1_3:34425927-34425946 Msa0115560:CDS 45.0%
TATGTGCTCTTGTAGGTGGT+TGG + chr1_3:34425931-34425950 Msa0115560:CDS 45.0%
ATGTGCTCTTGTAGGTGGTT+GGG + chr1_3:34425932-34425951 Msa0115560:CDS 45.0%
! TTTCTAGGTTGGGCAACGAA+AGG + chr1_3:34426099-34426118 Msa0115560:CDS 45.0%
! TTCTAGGTTGGGCAACGAAA+GGG + chr1_3:34426100-34426119 Msa0115560:CDS 45.0%
TTGGAGGTGATTGTAGATCC+TGG + chr1_3:34426182-34426201 Msa0115560:CDS 45.0%
TGGAGGTGATTGTAGATCCT+GGG + chr1_3:34426183-34426202 Msa0115560:CDS 45.0%
TGGGAGGATTCTTCCAAGAT+GGG + chr1_3:34426202-34426221 Msa0115560:CDS 45.0%
! GCTGCTTCTGAAAGGAATTC+AGG + chr1_3:34426224-34426243 Msa0115560:CDS 45.0%
! GCTTCTGAAAGGAATTCAGG+TGG + chr1_3:34426227-34426246 Msa0115560:intron 45.0%
!! CTCGGACCAGGTTGATTATT+GGG - chr1_3:34426396-34426415 None:intergenic 45.0%
! TGACTTGTGCTTCCATTGCT+CGG - chr1_3:34426414-34426433 None:intergenic 45.0%
TTTCTCATAACCGGCACCAT+TGG - chr1_3:34426469-34426488 None:intergenic 45.0%
TTAGGTGCAAATGACGAAGG+TGG - chr1_3:34426561-34426580 None:intergenic 45.0%
CGTTTCACGAATCAGAATGG+TGG + chr1_3:34426714-34426733 Msa0115560:CDS 45.0%
! GAATCAGAATGGTGGGATCA+GGG + chr1_3:34426722-34426741 Msa0115560:CDS 45.0%
CTTCCTCCATCTTTGATGCT+TGG + chr1_3:34426747-34426766 Msa0115560:CDS 45.0%
GCCTTTCCAAGCATCAAAGA+TGG - chr1_3:34426756-34426775 None:intergenic 45.0%
TCACTAGAACTAGCAAACGG+TGG - chr1_3:34426786-34426805 None:intergenic 45.0%
TTTCATCACCTGCTCCAGAA+CGG - chr1_3:34426818-34426837 None:intergenic 45.0%
!! TTCTGGAGCAGGTGATGAAA+GGG + chr1_3:34426818-34426837 Msa0115560:CDS 45.0%
GAAACCTGTGATAGTTGGGT+AGG + chr1_3:34427117-34427136 Msa0115560:intron 45.0%
TACGGCAGTGCTCTTTATAG+AGG - chr1_3:34427539-34427558 None:intergenic 45.0%
GCATGTCCAAGTTTCCCTTA+TGG - chr1_3:34427835-34427854 None:intergenic 45.0%
GTGGTGAATTTGGTTGTTGC+AGG + chr1_3:34428216-34428235 Msa0115560:intron 45.0%
GGTACAGACATTATACCAGC+AGG - chr1_3:34428274-34428293 None:intergenic 45.0%
!! TCCAGAAAATTGCACTGGCT+TGG + chr1_3:34428414-34428433 Msa0115560:intron 45.0%
! TCCAAGCCAGTGCAATTTTC+TGG - chr1_3:34428418-34428437 None:intergenic 45.0%
ACAGGAGTTTGCATTGCTTG+GGG + chr1_3:34428453-34428472 Msa0115560:intron 45.0%
ACCTTGTTCAAACAGGGTCT+TGG + chr1_3:34428572-34428591 Msa0115560:intron 45.0%
TCCAAGACCCTGTTTGAACA+AGG - chr1_3:34428576-34428595 None:intergenic 45.0%
TGAACCGAGTAGTTCAACAC+AGG + chr1_3:34428784-34428803 Msa0115560:CDS 45.0%
TCCTCGACTAACGGTTGTTT+GGG - chr1_3:34429019-34429038 None:intergenic 45.0%
GAAAAGGACGGGGAAAAGTT+TGG + chr1_3:34429052-34429071 Msa0115560:CDS 45.0%
! GGCTTATCCTCCGATTTTTC+TGG + chr1_3:34429073-34429092 Msa0115560:CDS 45.0%
GATGGCTCTTCTTTCGATTG+CGG + chr1_3:34429160-34429179 Msa0115560:CDS 45.0%
! ACCACCTTCTTTTTGCCCTA+AGG - chr1_3:34429282-34429301 None:intergenic 45.0%
AAAAGAAGGTGGTGCTTGTC+TGG + chr1_3:34429289-34429308 Msa0115560:CDS 45.0%
TCTGGCTGCTAAGTCTTGAT+TGG + chr1_3:34429516-34429535 Msa0115560:intron 45.0%
TACTACTGTGGTGGTACCAA+AGG - chr1_3:34429682-34429701 None:intergenic 45.0%
! AACGTGTGCTGATACTACTG+TGG - chr1_3:34429694-34429713 None:intergenic 45.0%
GCACACGTTCATTCTTGTAC+AGG + chr1_3:34429705-34429724 Msa0115560:intron 45.0%
GAGTATGAAAAGCGAGTCAC+TGG + chr1_3:34429766-34429785 Msa0115560:intron 45.0%
GCATGGCAAGAATTCTTTCC+AGG - chr1_3:34429796-34429815 None:intergenic 45.0%
! ATTATGGAAGGTGGCTTGCA+TGG - chr1_3:34429813-34429832 None:intergenic 45.0%
TCTGATGGGAATTTCAGGGA+GGG - chr1_3:34429917-34429936 None:intergenic 45.0%
TTCTGATGGGAATTTCAGGG+AGG - chr1_3:34429918-34429937 None:intergenic 45.0%
ATATTGTTTGGCTGAGGGAG+TGG + chr1_3:34430132-34430151 Msa0115560:intron 45.0%
TATTGTTTGGCTGAGGGAGT+GGG + chr1_3:34430133-34430152 Msa0115560:intron 45.0%
TGATTTCTCCTATGAGGAGC+GGG + chr1_3:34430342-34430361 Msa0115560:CDS 45.0%
! AATGCTTTTACGTCTCCGTC+AGG + chr1_3:34430671-34430690 Msa0115560:CDS 45.0%
! AGGAGGCACAATTGCAACAA+AGG - chr1_3:34430884-34430903 None:intergenic 45.0%
ATCCAAAACTACCAGGTAGC+AGG + chr1_3:34431320-34431339 Msa0115560:intron 45.0%
AAATCACATCACCTGCTACC+TGG - chr1_3:34431334-34431353 None:intergenic 45.0%
GTTAACCTGTTATTGCCGAG+TGG + chr1_3:34431519-34431538 Msa0115560:intron 45.0%
GTTTACCACTCGGCAATAAC+AGG - chr1_3:34431527-34431546 None:intergenic 45.0%
TGCATTGTCATTAAGGGCTC+TGG + chr1_3:34431555-34431574 Msa0115560:intron 45.0%
GCAACTCCTCAAAGTTGCTT+TGG - chr1_3:34431745-34431764 None:intergenic 45.0%
AACTTGACTGCAGAACCTCA+AGG - chr1_3:34431869-34431888 None:intergenic 45.0%
TGAATCTCTATTGCCTTCGG+GGG - chr1_3:34431922-34431941 None:intergenic 45.0%
GTGAATCTCTATTGCCTTCG+GGG - chr1_3:34431923-34431942 None:intergenic 45.0%
TATTCAGAGTGCACATCTGG+AGG + chr1_3:34432011-34432030 Msa0115560:CDS 45.0%
!! TTCTCAGTGGACTAGCATGT+TGG + chr1_3:34432055-34432074 Msa0115560:CDS 45.0%
GAGACATCAATGGAGCAATC+TGG + chr1_3:34432086-34432105 Msa0115560:CDS 45.0%
AGCAATCTGGCGTCAAATAC+AGG + chr1_3:34432099-34432118 Msa0115560:CDS 45.0%
TAGGATGACTCTTACTGCGA+GGG + chr1_3:34432133-34432152 Msa0115560:CDS 45.0%
ACTGATTAGCAGTGCACTCA+GGG - chr1_3:34432340-34432359 None:intergenic 45.0%
! TACTGATTAGCAGTGCACTC+AGG - chr1_3:34432341-34432360 None:intergenic 45.0%
CAGTAGTTGGATTCCACCAA+AGG - chr1_3:34432543-34432562 None:intergenic 45.0%
GCTTCTAAGCCGAATTACTG+GGG - chr1_3:34432751-34432770 None:intergenic 45.0%
CGCTTCTAAGCCGAATTACT+GGG - chr1_3:34432752-34432771 None:intergenic 45.0%
TCGCTTCTAAGCCGAATTAC+TGG - chr1_3:34432753-34432772 None:intergenic 45.0%
TAATTCGGCTTAGAAGCGAG+TGG + chr1_3:34432754-34432773 Msa0115560:intron 45.0%
AATTCGGCTTAGAAGCGAGT+GGG + chr1_3:34432755-34432774 Msa0115560:intron 45.0%
CATGTGACTAGGATGGTCAT+GGG + chr1_3:34432901-34432920 Msa0115560:intron 45.0%
CATGTTCTTCCATGGTCCAA+TGG + chr1_3:34433114-34433133 Msa0115560:intron 45.0%
CCTGCCAATTAAAGTGGCTA+AGG - chr1_3:34433159-34433178 None:intergenic 45.0%
! CCTTAGCCACTTTAATTGGC+AGG + chr1_3:34433156-34433175 Msa0115560:intron 45.0%
ACTCTTCCTGTATCGTTTGG+AGG - chr1_3:34433189-34433208 None:intergenic 45.0%
TAGTGAGCTTTGCAATCTCC+GGG + chr1_3:34433245-34433264 Msa0115560:intron 45.0%
ATAACTCCACACAGAGCCAT+CGG - chr1_3:34433542-34433561 None:intergenic 45.0%
GGAAGACAAAAATGCCCTTG+TGG - chr1_3:34433639-34433658 None:intergenic 45.0%
! GCTTTAAGCTACCTAGCAGT+TGG - chr1_3:34433661-34433680 None:intergenic 45.0%
ACAACATACGCAAGGTCACA+TGG - chr1_3:34433862-34433881 None:intergenic 45.0%
!! ATAATAATAATAAAAAGATA+CGG - chr1_3:34427557-34427576 None:intergenic 5.0%
GAGAGAGAGAGAGAGAGACT+AGG - chr1_3:34423718-34423737 None:intergenic 50.0%
GAGGCGGGAATCAAGGAAAT+CGG - chr1_3:34423809-34423828 None:intergenic 50.0%
GTGTGTTAACCCTCCTGTTC+CGG + chr1_3:34424200-34424219 Msa0115560:intron 50.0%
TGTGTTAACCCTCCTGTTCC+GGG + chr1_3:34424201-34424220 Msa0115560:intron 50.0%
! ATCTGGAGTTTAGTCGGGTC+GGG + chr1_3:34424241-34424260 Msa0115560:intron 50.0%
TTCACCTAGGAATCAGACGC+GGG + chr1_3:34424297-34424316 Msa0115560:intron 50.0%
CACCAAAGCACGAATCGTTC+GGG - chr1_3:34424327-34424346 None:intergenic 50.0%
CCACCAAAGCACGAATCGTT+CGG - chr1_3:34424328-34424347 None:intergenic 50.0%
ACGAATTGTTCGGGAGAACC+CGG - chr1_3:34424515-34424534 None:intergenic 50.0%
TCTCCCGAACAATTCGTGCT+TGG + chr1_3:34424518-34424537 Msa0115560:intron 50.0%
CTCCCGAACAATTCGTGCTT+GGG + chr1_3:34424519-34424538 Msa0115560:intron 50.0%
CACCCAAGCACGAATTGTTC+GGG - chr1_3:34424524-34424543 None:intergenic 50.0%
CCACCCAAGCACGAATTGTT+CGG - chr1_3:34424525-34424544 None:intergenic 50.0%
CAGATCTGCAACCAGTTTGC+TGG + chr1_3:34425051-34425070 Msa0115560:intron 50.0%
ATTCAACCTGGCCAGCAAAC+TGG - chr1_3:34425065-34425084 None:intergenic 50.0%
GAACGACACGGGAGAAGAAA+AGG - chr1_3:34425159-34425178 None:intergenic 50.0%
CACAGACTTCTGAACGACAC+GGG - chr1_3:34425170-34425189 None:intergenic 50.0%
GCGTGCGTGTTTGTTTGTGA+TGG + chr1_3:34425201-34425220 Msa0115560:intron 50.0%
!! TTTTTAGCCGGTGGAGGCAT+TGG + chr1_3:34425364-34425383 Msa0115560:intron 50.0%
!!! TTTTAGCCGGTGGAGGCATT+GGG + chr1_3:34425365-34425384 Msa0115560:intron 50.0%
CTTGTAGGTGGTTGGGTTTC+TGG + chr1_3:34425939-34425958 Msa0115560:CDS 50.0%
!! CAGGTTGGCTCTGCATTTGA+TGG + chr1_3:34426071-34426090 Msa0115560:intron 50.0%
TAGTTCGTCGGACGATGAGT+TGG + chr1_3:34426163-34426182 Msa0115560:CDS 50.0%
AGGTGATTGTAGATCCTGGG+AGG + chr1_3:34426186-34426205 Msa0115560:CDS 50.0%
CATCTTGGAAGAATCCTCCC+AGG - chr1_3:34426203-34426222 None:intergenic 50.0%
CTGGGAGGATTCTTCCAAGA+TGG + chr1_3:34426201-34426220 Msa0115560:CDS 50.0%
CTTTCAGAAGCAGCCCATCT+TGG - chr1_3:34426218-34426237 None:intergenic 50.0%
!! CAAGATGGGCTGCTTCTGAA+AGG + chr1_3:34426216-34426235 Msa0115560:CDS 50.0%
!! GCTCGGACCAGGTTGATTAT+TGG - chr1_3:34426397-34426416 None:intergenic 50.0%
AATCAACCTGGTCCGAGCAA+TGG + chr1_3:34426399-34426418 Msa0115560:CDS 50.0%
ACCTAGCACATCTGGTGAGA+AGG + chr1_3:34426650-34426669 Msa0115560:CDS 50.0%
CCTAGCACATCTGGTGAGAA+GGG + chr1_3:34426651-34426670 Msa0115560:CDS 50.0%
! CGAATCAGAATGGTGGGATC+AGG + chr1_3:34426721-34426740 Msa0115560:CDS 50.0%
AGTGAATCTGCGTACCGTTC+TGG + chr1_3:34426801-34426820 Msa0115560:CDS 50.0%
!! GTTCTGGAGCAGGTGATGAA+AGG + chr1_3:34426817-34426836 Msa0115560:CDS 50.0%
! ACCTTCTAGCTGCTGCTAGT+AGG + chr1_3:34427419-34427438 Msa0115560:intron 50.0%
ACCTACTAGCAGCAGCTAGA+AGG - chr1_3:34427423-34427442 None:intergenic 50.0%
!! ACTGGCTTGGATGCTTCAGA+GGG + chr1_3:34428427-34428446 Msa0115560:intron 50.0%
GGATGCTTCAGAGGGAAAAC+AGG + chr1_3:34428435-34428454 Msa0115560:intron 50.0%
CAGGAGTTTGCATTGCTTGG+GGG + chr1_3:34428454-34428473 Msa0115560:intron 50.0%
AGGAGTTTGCATTGCTTGGG+GGG + chr1_3:34428455-34428474 Msa0115560:intron 50.0%
!!! GGGGATTTTGGCTGATGATC+AGG + chr1_3:34428475-34428494 Msa0115560:intron 50.0%
! GCTTCAGCTTTATGGTTGCG+TGG - chr1_3:34428668-34428687 None:intergenic 50.0%
TCTGCCCTGCAAGTGTTCTT+CGG + chr1_3:34428846-34428865 Msa0115560:CDS 50.0%
ACTGCCGAAGAACACTTGCA+GGG - chr1_3:34428853-34428872 None:intergenic 50.0%
TGCAAGTGTTCTTCGGCAGT+GGG + chr1_3:34428853-34428872 Msa0115560:CDS 50.0%
TCCCAAACAACCGTTAGTCG+AGG + chr1_3:34429015-34429034 Msa0115560:CDS 50.0%
CTCCTCGACTAACGGTTGTT+TGG - chr1_3:34429020-34429039 None:intergenic 50.0%
CAAACAACCGTTAGTCGAGG+AGG + chr1_3:34429018-34429037 Msa0115560:CDS 50.0%
GCGCTCTTGCAAAAGTAGGT+TGG + chr1_3:34429185-34429204 Msa0115560:CDS 50.0%
! CCTTCTTTTTGCCCTAAGGC+TGG - chr1_3:34429278-34429297 None:intergenic 50.0%
CCAGCCTTAGGGCAAAAAGA+AGG + chr1_3:34429275-34429294 Msa0115560:CDS 50.0%
GCCTTAGGGCAAAAAGAAGG+TGG + chr1_3:34429278-34429297 Msa0115560:CDS 50.0%
GGTGGTACCAAAGGTAGAGA+AGG - chr1_3:34429673-34429692 None:intergenic 50.0%
! GTGTGCTGATACTACTGTGG+TGG - chr1_3:34429691-34429710 None:intergenic 50.0%
GTGGGACATCATCAAGGTAC+TGG + chr1_3:34430151-34430170 Msa0115560:intron 50.0%
! TCAGGAGGTACACTTCTCGA+TGG + chr1_3:34430996-34431015 Msa0115560:intron 50.0%
TTTAGGGGGGATGCATTCCA+TGG + chr1_3:34431280-34431299 Msa0115560:intron 50.0%
TTAGGGGGGATGCATTCCAT+GGG + chr1_3:34431281-34431300 Msa0115560:intron 50.0%
! CACCTGCTACCTGGTAGTTT+TGG - chr1_3:34431325-34431344 None:intergenic 50.0%
AGTTGCCTCTGTGACGATCT+TGG + chr1_3:34431759-34431778 Msa0115560:CDS 50.0%
TACCACCAAGATCGTCACAG+AGG - chr1_3:34431767-34431786 None:intergenic 50.0%
CACATCTGGAGGACCACTAA+AGG + chr1_3:34432022-34432041 Msa0115560:CDS 50.0%
!! GTGGACTAGCATGTTGGACT+TGG + chr1_3:34432061-34432080 Msa0115560:CDS 50.0%
! GGACTTGGTCGAGACATCAA+TGG + chr1_3:34432076-34432095 Msa0115560:CDS 50.0%
GTAGGATGACTCTTACTGCG+AGG + chr1_3:34432132-34432151 Msa0115560:CDS 50.0%
CTCGTCCTGTTACTGTGACA+CGG + chr1_3:34432602-34432621 Msa0115560:CDS 50.0%
GTGATCCGTGTCACAGTAAC+AGG - chr1_3:34432610-34432629 None:intergenic 50.0%
ATTCGGCTTAGAAGCGAGTG+GGG + chr1_3:34432756-34432775 Msa0115560:intron 50.0%
! TTCTATCATTGCTGACGGGC+CGG + chr1_3:34432844-34432863 Msa0115560:intron 50.0%
AGAGTTGTCGCCATGTGACT+AGG + chr1_3:34432890-34432909 Msa0115560:intron 50.0%
TTGTCGCCATGTGACTAGGA+TGG + chr1_3:34432894-34432913 Msa0115560:intron 50.0%
CCATGACCATCCTAGTCACA+TGG - chr1_3:34432903-34432922 None:intergenic 50.0%
CCATGTGACTAGGATGGTCA+TGG + chr1_3:34432900-34432919 Msa0115560:intron 50.0%
ATGGTCATGGGTTCAAGTCG+TGG + chr1_3:34432913-34432932 Msa0115560:intron 50.0%
TGGTCATGGGTTCAAGTCGT+GGG + chr1_3:34432914-34432933 Msa0115560:intron 50.0%
ACGGAGCTCGGAAAGTTACA+TGG - chr1_3:34432968-34432987 None:intergenic 50.0%
GATCAATGCCCATTGGACCA+TGG - chr1_3:34433126-34433145 None:intergenic 50.0%
AGCACCCCTGCCAATTAAAG+TGG - chr1_3:34433165-34433184 None:intergenic 50.0%
GTGCTTCCTCCAAACGATAC+AGG + chr1_3:34433180-34433199 Msa0115560:intron 50.0%
AGTGAGCTTTGCAATCTCCG+GGG + chr1_3:34433246-34433265 Msa0115560:intron 50.0%
! CTTTTCTTCCTGCCGGATAC+AGG - chr1_3:34433356-34433375 None:intergenic 50.0%
GGCTCTGTGTGGAGTTATGA+AGG + chr1_3:34433544-34433563 Msa0115560:three_prime_UTR 50.0%
! CCAAATTTCACCAGCACTGG+GGG - chr1_3:34433887-34433906 None:intergenic 50.0%
GCCAAATTTCACCAGCACTG+GGG - chr1_3:34433888-34433907 None:intergenic 50.0%
CGCCAAATTTCACCAGCACT+GGG - chr1_3:34433889-34433908 None:intergenic 50.0%
TCGCCAAATTTCACCAGCAC+TGG - chr1_3:34433890-34433909 None:intergenic 50.0%
GTGTTAACCCTCCTGTTCCG+GGG + chr1_3:34424202-34424221 Msa0115560:intron 55.0%
GAAGGGGCTACCTCGTAATC+TGG + chr1_3:34424224-34424243 Msa0115560:intron 55.0%
GAGTTTAGTCGGGTCGGGAT+GGG + chr1_3:34424246-34424265 Msa0115560:intron 55.0%
AGAACCCGCGTCTGATTCCT+AGG - chr1_3:34424304-34424323 None:intergenic 55.0%
CTCCCGAACGATTCGTGCTT+TGG + chr1_3:34424322-34424341 Msa0115560:intron 55.0%
CCGAACGATTCGTGCTTTGG+TGG + chr1_3:34424325-34424344 Msa0115560:intron 55.0%
TCGGGAGAACCCGGATTCAT+GGG - chr1_3:34424506-34424525 None:intergenic 55.0%
TTCGGGAGAACCCGGATTCA+TGG - chr1_3:34424507-34424526 None:intergenic 55.0%
CCGAACAATTCGTGCTTGGG+TGG + chr1_3:34424522-34424541 Msa0115560:intron 55.0%
! CCGTGTACCCTGCTGCTTAT+CGG - chr1_3:34424694-34424713 None:intergenic 55.0%
CCGATAAGCAGCAGGGTACA+CGG + chr1_3:34424691-34424710 Msa0115560:intron 55.0%
AGACGGTGAGCAGACGAGAA+AGG + chr1_3:34425255-34425274 Msa0115560:intron 55.0%
GACGGTGAGCAGACGAGAAA+GGG + chr1_3:34425256-34425275 Msa0115560:intron 55.0%
ACGGTGAGCAGACGAGAAAG+GGG + chr1_3:34425257-34425276 Msa0115560:intron 55.0%
CGAGAAAGGGGAAGAGAGAG+CGG + chr1_3:34425269-34425288 Msa0115560:intron 55.0%
GAGAAAGGGGAAGAGAGAGC+GGG + chr1_3:34425270-34425289 Msa0115560:intron 55.0%
AGAAAGGGGAAGAGAGAGCG+GGG + chr1_3:34425271-34425290 Msa0115560:intron 55.0%
ATACAGCCCAATGCCTCCAC+CGG - chr1_3:34425374-34425393 None:intergenic 55.0%
! TTCGTCGGACGATGAGTTGG+AGG + chr1_3:34426166-34426185 Msa0115560:CDS 55.0%
GGAGTAGGACCTAGCACATC+TGG + chr1_3:34426642-34426661 Msa0115560:CDS 55.0%
CCCTTCTCACCAGATGTGCT+AGG - chr1_3:34426654-34426673 None:intergenic 55.0%
!! CACTGGCTTGGATGCTTCAG+AGG + chr1_3:34428426-34428445 Msa0115560:intron 55.0%
GGAGTTTGCATTGCTTGGGG+GGG + chr1_3:34428456-34428475 Msa0115560:intron 55.0%
! GCATTGCTTGGGGGGGATTT+TGG + chr1_3:34428463-34428482 Msa0115560:intron 55.0%
GGGGCCTGTGTTGAACTACT+CGG - chr1_3:34428791-34428810 None:intergenic 55.0%
AGTAGTTCAACACAGGCCCC+AGG + chr1_3:34428791-34428810 Msa0115560:CDS 55.0%
!!! AGCTGGCCTTTTCCTACCTG+GGG - chr1_3:34428810-34428829 None:intergenic 55.0%
!!! CAGCTGGCCTTTTCCTACCT+GGG - chr1_3:34428811-34428830 None:intergenic 55.0%
ACAACCAGTGTACCAGCAGC+TGG - chr1_3:34428827-34428846 None:intergenic 55.0%
CACTGCCGAAGAACACTTGC+AGG - chr1_3:34428854-34428873 None:intergenic 55.0%
CTGCAAGTGTTCTTCGGCAG+TGG + chr1_3:34428852-34428871 Msa0115560:CDS 55.0%
GGCTCTTCTTTCGATTGCGG+TGG + chr1_3:34429163-34429182 Msa0115560:CDS 55.0%
GGTGGCGCTCTTGCAAAAGT+AGG + chr1_3:34429181-34429200 Msa0115560:CDS 55.0%
! CAGAGCTTGCTCCAGCCTTA+GGG + chr1_3:34429264-34429283 Msa0115560:CDS 55.0%
AAGCGAGTCACTGGTGATCC+TGG + chr1_3:34429775-34429794 Msa0115560:intron 55.0%
GAGGGAGTGGGACATCATCA+AGG + chr1_3:34430145-34430164 Msa0115560:intron 55.0%
GCGGGCCTTCTACAAGAAGT+TGG + chr1_3:34430360-34430379 Msa0115560:CDS 55.0%
TTGCAGGCATATGCAGCTGC+TGG + chr1_3:34430615-34430634 Msa0115560:intron 55.0%
TGCCTCTGTGACGATCTTGG+TGG + chr1_3:34431762-34431781 Msa0115560:CDS 55.0%
!! TCGGGGGTATTCAGTAAGCC+AGG - chr1_3:34431906-34431925 None:intergenic 55.0%
GGCTTACTGAATACCCCCGA+AGG + chr1_3:34431906-34431925 Msa0115560:CDS 55.0%
TGCGAGGGACAGAGCTGTTA+AGG + chr1_3:34432148-34432167 Msa0115560:CDS 55.0%
ATTGGGGATGGCCAAACCTC+AGG - chr1_3:34432188-34432207 None:intergenic 55.0%
TTCGGCTTAGAAGCGAGTGG+GGG + chr1_3:34432757-34432776 Msa0115560:intron 55.0%
! TCTATCATTGCTGACGGGCC+GGG + chr1_3:34432845-34432864 Msa0115560:intron 55.0%
ACTTTCCGAGCTCCGTCATG+AGG + chr1_3:34432972-34432991 Msa0115560:intron 55.0%
CTTTCCGAGCTCCGTCATGA+GGG + chr1_3:34432973-34432992 Msa0115560:intron 55.0%
TTTCCGAGCTCCGTCATGAG+GGG + chr1_3:34432974-34432993 Msa0115560:intron 55.0%
! AATCCCCTCATGACGGAGCT+CGG - chr1_3:34432980-34432999 None:intergenic 55.0%
GCATTTGGCGAAGACCATGC+TGG + chr1_3:34433394-34433413 Msa0115560:CDS 55.0%
TTTGGCGAAGACCATGCTGG+CGG + chr1_3:34433397-34433416 Msa0115560:CDS 55.0%
!! ATGCTGGCGGTTCTGGAACT+CGG + chr1_3:34433410-34433429 Msa0115560:CDS 55.0%
! TAGCTTCCGATGGCTCTGTG+TGG + chr1_3:34433533-34433552 Msa0115560:three_prime_UTR 55.0%
TGGGGGCAACAACATACGCA+AGG - chr1_3:34433870-34433889 None:intergenic 55.0%
TATGTTGTTGCCCCCAGTGC+TGG + chr1_3:34433874-34433893 Msa0115560:three_prime_UTR 55.0%
!! CCCCCAGTGCTGGTGAAATT+TGG + chr1_3:34433884-34433903 Msa0115560:three_prime_UTR 55.0%
TAACCCTCCTGTTCCGGGGA+AGG + chr1_3:34424206-34424225 Msa0115560:intron 60.0%
AACCCTCCTGTTCCGGGGAA+GGG + chr1_3:34424207-34424226 Msa0115560:intron 60.0%
TTACGAGGTAGCCCCTTCCC+CGG - chr1_3:34424222-34424241 None:intergenic 60.0%
GGAGTTTAGTCGGGTCGGGA+TGG + chr1_3:34424245-34424264 Msa0115560:intron 60.0%
TTTAGTCGGGTCGGGATGGG+AGG + chr1_3:34424249-34424268 Msa0115560:intron 60.0%
!! CTGCAACCAGTTTGCTGGCC+AGG + chr1_3:34425056-34425075 Msa0115560:intron 60.0%
!! GGTGGAGGCATTGGGCTGTA+TGG + chr1_3:34425373-34425392 Msa0115560:intron 60.0%
GTGCTTCCATTGCTCGGACC+AGG - chr1_3:34426408-34426427 None:intergenic 60.0%
!! TCTGCGTACCGTTCTGGAGC+AGG + chr1_3:34426807-34426826 Msa0115560:CDS 60.0%
GTTCAACACAGGCCCCAGGT+AGG + chr1_3:34428795-34428814 Msa0115560:CDS 60.0%
CACAGGCCCCAGGTAGGAAA+AGG + chr1_3:34428801-34428820 Msa0115560:CDS 60.0%
!!! GCAGCTGGCCTTTTCCTACC+TGG - chr1_3:34428812-34428831 None:intergenic 60.0%
GGTAGGAAAAGGCCAGCTGC+TGG + chr1_3:34428812-34428831 Msa0115560:CDS 60.0%
AAGGCCAGCTGCTGGTACAC+TGG + chr1_3:34428820-34428839 Msa0115560:CDS 60.0%
CCTAAGGCTGGAGCAAGCTC+TGG - chr1_3:34429266-34429285 None:intergenic 60.0%
! CCAGAGCTTGCTCCAGCCTT+AGG + chr1_3:34429263-34429282 Msa0115560:CDS 60.0%
GTAGAAGGCCCGCTCCTCAT+AGG - chr1_3:34430353-34430372 None:intergenic 60.0%
GCGGGTGATCACAAGCCTGA+CGG - chr1_3:34430689-34430708 None:intergenic 60.0%
TCGGCTTAGAAGCGAGTGGG+GGG + chr1_3:34432758-34432777 Msa0115560:intron 60.0%
GAAGCGAGTGGGGGGAATTG+AGG + chr1_3:34432766-34432785 Msa0115560:intron 60.0%
! CTATCATTGCTGACGGGCCG+GGG + chr1_3:34432846-34432865 Msa0115560:intron 60.0%
! TATCATTGCTGACGGGCCGG+GGG + chr1_3:34432847-34432866 Msa0115560:intron 60.0%
CATTGCGCCAAGATTCCCCC+CGG - chr1_3:34432866-34432885 None:intergenic 60.0%
GGGGGGAATCTTGGCGCAAT+GGG + chr1_3:34432865-34432884 Msa0115560:intron 60.0%
! TGTGTTGGCCTGTATCCGGC+AGG + chr1_3:34433345-34433364 Msa0115560:intron 60.0%
GAAGACCATGCTGGCGGTTC+TGG + chr1_3:34433403-34433422 Msa0115560:CDS 60.0%
GAGTTCCAGAACCGCCAGCA+TGG - chr1_3:34433411-34433430 None:intergenic 60.0%
ACCCTCCTGTTCCGGGGAAG+GGG + chr1_3:34424208-34424227 Msa0115560:intron 65.0%
! ATCATTGCTGACGGGCCGGG+GGG + chr1_3:34432848-34432867 Msa0115560:intron 65.0%
CGGGGGGAATCTTGGCGCAA+TGG + chr1_3:34432864-34432883 Msa0115560:intron 65.0%
GCCCCTTCCCCGGAACAGGA+GGG - chr1_3:34424212-34424231 None:intergenic 70.0%
AGCCCCTTCCCCGGAACAGG+AGG - chr1_3:34424213-34424232 None:intergenic 70.0%
GGTAGCCCCTTCCCCGGAAC+AGG - chr1_3:34424216-34424235 None:intergenic 70.0%
! TGACGGGCCGGGGGGAATCT+TGG + chr1_3:34432856-34432875 Msa0115560:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 34423640 34434040 34423640 ID=Msa0115560;Name=Msa0115560
chr1_3 mRNA 34423640 34434040 34423640 ID=Msa0115560-mRNA-1;Parent=Msa0115560;Name=Msa0115560-mRNA-1;_AED=0.07;_eAED=0.07;_QI=309|0.9|0.90|1|0.9|0.81|11|569|1002
chr1_3 exon 34423640 34423844 34423640 ID=Msa0115560-mRNA-1:exon:10877;Parent=Msa0115560-mRNA-1
chr1_3 exon 34425784 34425989 34425784 ID=Msa0115560-mRNA-1:exon:10878;Parent=Msa0115560-mRNA-1
chr1_3 exon 34426074 34426245 34426074 ID=Msa0115560-mRNA-1:exon:10879;Parent=Msa0115560-mRNA-1
chr1_3 exon 34426328 34426884 34426328 ID=Msa0115560-mRNA-1:exon:10880;Parent=Msa0115560-mRNA-1
chr1_3 exon 34428238 34428309 34428238 ID=Msa0115560-mRNA-1:exon:10881;Parent=Msa0115560-mRNA-1
chr1_3 exon 34428644 34429493 34428644 ID=Msa0115560-mRNA-1:exon:10882;Parent=Msa0115560-mRNA-1
chr1_3 exon 34430278 34430408 34430278 ID=Msa0115560-mRNA-1:exon:10883;Parent=Msa0115560-mRNA-1
chr1_3 exon 34430621 34430842 34430621 ID=Msa0115560-mRNA-1:exon:10884;Parent=Msa0115560-mRNA-1
chr1_3 exon 34431603 34432190 34431603 ID=Msa0115560-mRNA-1:exon:10885;Parent=Msa0115560-mRNA-1
chr1_3 exon 34432460 34432669 34432460 ID=Msa0115560-mRNA-1:exon:10886;Parent=Msa0115560-mRNA-1
chr1_3 exon 34433367 34434040 34433367 ID=Msa0115560-mRNA-1:exon:10887;Parent=Msa0115560-mRNA-1
chr1_3 five_prime_UTR 34423640 34423844 34423640 ID=Msa0115560-mRNA-1:five_prime_utr;Parent=Msa0115560-mRNA-1
chr1_3 five_prime_UTR 34425784 34425887 34425784 ID=Msa0115560-mRNA-1:five_prime_utr;Parent=Msa0115560-mRNA-1
chr1_3 CDS 34425888 34425989 34425888 ID=Msa0115560-mRNA-1:cds;Parent=Msa0115560-mRNA-1
chr1_3 CDS 34426074 34426245 34426074 ID=Msa0115560-mRNA-1:cds;Parent=Msa0115560-mRNA-1
chr1_3 CDS 34426328 34426884 34426328 ID=Msa0115560-mRNA-1:cds;Parent=Msa0115560-mRNA-1
chr1_3 CDS 34428238 34428309 34428238 ID=Msa0115560-mRNA-1:cds;Parent=Msa0115560-mRNA-1
chr1_3 CDS 34428644 34429493 34428644 ID=Msa0115560-mRNA-1:cds;Parent=Msa0115560-mRNA-1
chr1_3 CDS 34430278 34430408 34430278 ID=Msa0115560-mRNA-1:cds;Parent=Msa0115560-mRNA-1
chr1_3 CDS 34430621 34430842 34430621 ID=Msa0115560-mRNA-1:cds;Parent=Msa0115560-mRNA-1
chr1_3 CDS 34431603 34432190 34431603 ID=Msa0115560-mRNA-1:cds;Parent=Msa0115560-mRNA-1
chr1_3 CDS 34432460 34432669 34432460 ID=Msa0115560-mRNA-1:cds;Parent=Msa0115560-mRNA-1
chr1_3 CDS 34433367 34433471 34433367 ID=Msa0115560-mRNA-1:cds;Parent=Msa0115560-mRNA-1
chr1_3 three_prime_UTR 34433472 34434040 34433472 ID=Msa0115560-mRNA-1:three_prime_utr;Parent=Msa0115560-mRNA-1
Gene Sequence

>Msa0115560

ATGCTTGATAATGTGGACAATATTATCGACTCAACTTGGAGACTATGTGCTCTTGTAGGTGGTTGGGTTTCTGGTTTAATTTCAAAACCTTACACAAAAGTGGTTGGCTCTGCATTTGATGGTTCTATTTCTAGGTTGGGCAACGAAAGGGAAAATAGTTATCTAGATTACATGGATCAGTGTATATATATTAGTTCGTCGGACGATGAGTTGGAGGTGATTGTAGATCCTGGGAGGATTCTTCCAAGATGGGCTGCTTCTGAAAGGAATTCAGATTCAAGAAGGGCAAAAAGTTCAAACGCGAGCTCGTCTAACGTTTTTAATCATTCACAAGTTAAGCCCAATAATCAACCTGGTCCGAGCAATGGAAGCACAAGTCAGCATCAGACAGTAAATTCCCGAATTTCTAATTCCAATGGTGCCGGTTATGAGAAAATGTCATCTCAACAAGCTTTTAACAGGACCCTTCCACCATCTTTTCAATCATCTGGTACAAGGGCTCTTCCACCTTCGTCATTTGCACCTAATAACAGATTAAATAACTTAAGCAGCAGTCAGCTGCATGATGCATACAAGAATCGTCATCATGGAGTAGGACCTAGCACATCTGGTGAGAAGGGCTTTTTTCGTGACAATTTTGGCAGAGGCAATGATGGAGATCGTTTCACGAATCAGAATGGTGGGATCAGGGCTCTTCCTCCATCTTTGATGCTTGGAAAGGCTATAACTCCACCGTTTGCTAGTTCTAGTGAATCTGCGTACCGTTCTGGAGCAGGTGATGAAAGGGCTCCTGAAACTGATGAGAGACTAATTTATGAAGCAGCATTACAGGATATCAGTCAACCATTAAAAGAAGCTGATTTACCTGCTGGTATAATGTCTGTACCTCTAATGAGACATCAGATAAAATGGAAAACAGATGATCCACGCAACCATAAAGCTGAAGCCTTGAATTTGGATGATGATGATGAGAATGGTAGTATTGATGTGGAAAAGGAAAAGCTTAAAAATGATGAAGAATCCAATGATGCAAAACCTATTACTGAACCGAGTAGTTCAACACAGGCCCCAGGTAGGAAAAGGCCAGCTGCTGGTACACTGGTTGTCTGCCCTGCAAGTGTTCTTCGGCAGTGGGCTAGAGAGCTTGATGAGAAAGTTGGAGATGAAAAGCTTTCTGTTTTGATTTTTCATGGGGGCAGTAGGACAAAGGATCCTGTTGAACTTGCAAAATATGATGTGGTTCTCACAACATACTCTCTTGTGACTAATGAAGTTCCCAAACAACCGTTAGTCGAGGAGGATGATATTGATGAAAAGGACGGGGAAAAGTTTGGCTTATCCTCCGATTTTTCTGGCAATAAAAAGAGGAAAAAGCTATATAATGGAAGTAAGAAGGGTAAAAAAGGTAGGAAGGGATTAGATGGCTCTTCTTTCGATTGCGGTGGCGCTCTTGCAAAAGTAGGTTGGTTTAGGGTTATTCTAGATGAAGCTCAAACGATAAAGAATCATAGGACTCAGATGGCCAGAGCTTGCTCCAGCCTTAGGGCAAAAAGAAGGTGGTGCTTGTCTGGCACGCCTATTCAGAATACCATTGATGATTTATATAGCTACTTTAGGTTCCTGAAGTATGATCCTTATGCTGTGTATAAATCATTCTACAATACAATAAAAGTCCCAATATCCAGAAATTCTATTCAAGGTTACAAAAAACTTCAAGCAGTTTTGAGGGCCATAATGCTACGTCGTACAAAAGGAACTTTGCTTGATGGCAAGCCTATAATCACTTTGCCTCCTAAAACAATTAATCTGGAGAAGGTTGATTTCTCCTATGAGGAGCGGGCCTTCTACAAGAAGTTGGAAGCTGATTCACGTTCTCAATTTAAGGCATATGCAGCTGCTGGCACAGTAAATCAAAACTACGCAAATATTCTTTTAATGCTTTTACGTCTCCGTCAGGCTTGTGATCACCCGCTTCTTGTTAAAGAATATAATTCTGATCCTGTTGGGAAAGATTCTGTTGAAATGGCAAAAAAGCTTCCAAAGGAGATGCTGATCAATCTGTTTAATAGTCTGGAAACAACTTCAGCTATATGCTGTGTCTGCAATGATCCACCTGATGACTCTGTTATTTCGATGTGTGGCCATGTCTTCTGTTATCAATGCGTGTCAGAACATTTGACAAGTGATGATAATATGTGCCCTGCAGTTCATTGTAAAGAACAACTTGGGGAAGATCTTGTTTTCTCCAAAGCAACTTTGAGGAGTTGCCTCTGTGACGATCTTGGTGGTAGTAGTTCTAGCAACTCGAGTCTTGTTGATTATTCCCTAGTACAGAACAGTGAGTACAGCTCATCTAAAATCAAAGCTGTCCTTGAGGTTCTGCAGTCAAGTTGTAAATTGAAGACTCCTGGCTTACTGAATACCCCCGAAGGCAATAGAGATTCACTGCCTTCTGATGATTCCGATATTGAAGATTTTGATTCAGATGTCAAGGTTACAAAACACACAAGTAAATATTCAGAGTGCACATCTGGAGGACCACTAAAGGCTATAATTTTTTCTCAGTGGACTAGCATGTTGGACTTGGTCGAGACATCAATGGAGCAATCTGGCGTCAAATACAGGAGACTTGATGGTAGGATGACTCTTACTGCGAGGGACAGAGCTGTTAAGGATTTCAATACTGATCCTGAGATTACTGTTATGCTGATGTCACTAAAAGCAGGAAACCTTGGTTTAAATATGGTTGCCGCATGTCATGTTATTCTTTTGGACCTTTGGTGGAATCCAACTACTGAAGATCAAGCTATTGATCGAGCTCATAGAATTGGACAGACTCGTCCTGTTACTGTGACACGGATCACCATAAAAGATACAGTTGAAGATAGAATATTGGCTCTACAGGAAGAAAAGAGAAAAATGGTGGCATCTGCATTTGGCGAAGACCATGCTGGCGGTTCTGGAACTCGGCTTACTGTTGATGATCTGAAATATCTTTTCATGGTTTAG
Protein sequence

>Msa0115560

MLDNVDNIIDSTWRLCALVGGWVSGLISKPYTKVVGSAFDGSISRLGNERENSYLDYMDQCIYISSSDDELEVIVDPGRILPRWAASERNSDSRRAKSSNASSSNVFNHSQVKPNNQPGPSNGSTSQHQTVNSRISNSNGAGYEKMSSQQAFNRTLPPSFQSSGTRALPPSSFAPNNRLNNLSSSQLHDAYKNRHHGVGPSTSGEKGFFRDNFGRGNDGDRFTNQNGGIRALPPSLMLGKAITPPFASSSESAYRSGAGDERAPETDERLIYEAALQDISQPLKEADLPAGIMSVPLMRHQIKWKTDDPRNHKAEALNLDDDDENGSIDVEKEKLKNDEESNDAKPITEPSSSTQAPGRKRPAAGTLVVCPASVLRQWARELDEKVGDEKLSVLIFHGGSRTKDPVELAKYDVVLTTYSLVTNEVPKQPLVEEDDIDEKDGEKFGLSSDFSGNKKRKKLYNGSKKGKKGRKGLDGSSFDCGGALAKVGWFRVILDEAQTIKNHRTQMARACSSLRAKRRWCLSGTPIQNTIDDLYSYFRFLKYDPYAVYKSFYNTIKVPISRNSIQGYKKLQAVLRAIMLRRTKGTLLDGKPIITLPPKTINLEKVDFSYEERAFYKKLEADSRSQFKAYAAAGTVNQNYANILLMLLRLRQACDHPLLVKEYNSDPVGKDSVEMAKKLPKEMLINLFNSLETTSAICCVCNDPPDDSVISMCGHVFCYQCVSEHLTSDDNMCPAVHCKEQLGEDLVFSKATLRSCLCDDLGGSSSSNSSLVDYSLVQNSEYSSSKIKAVLEVLQSSCKLKTPGLLNTPEGNRDSLPSDDSDIEDFDSDVKVTKHTSKYSECTSGGPLKAIIFSQWTSMLDLVETSMEQSGVKYRRLDGRMTLTARDRAVKDFNTDPEITVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILALQEEKRKMVASAFGEDHAGGSGTRLTVDDLKYLFMV*