Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256440 | KEH38778.1 | 78.818 | 203 | 8 | 1 | 1 | 168 | 1 | 203 | 1.24e-103 | 309 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256440 | A0A072VBG8 | 78.818 | 203 | 8 | 1 | 1 | 168 | 1 | 203 | 5.91e-104 | 309 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016570 | Msa0256440 | 0.801974 | 6.989169e-49 | -8.615850e-47 |
| Msa0145750 | Msa0256440 | 0.832194 | 1.086284e-55 | -8.615850e-47 |
| Msa0256440 | Msa0267000 | 0.808500 | 3.004626e-50 | -8.615850e-47 |
| Msa0256440 | Msa0267010 | 0.812033 | 5.196042e-51 | -8.615850e-47 |
| Msa0256440 | Msa0295770 | 0.874545 | 6.212175e-68 | -8.615850e-47 |
| Msa0256440 | Msa0326200 | 0.802917 | 4.467512e-49 | -8.615850e-47 |
| Msa0256440 | Msa0384800 | 0.808168 | 3.535394e-50 | -8.615850e-47 |
| Msa0256440 | Msa0406120 | 0.821269 | 4.416314e-53 | -8.615850e-47 |
| Msa0256440 | Msa0414420 | 0.808561 | 2.915288e-50 | -8.615850e-47 |
| Msa0256440 | Msa0436780 | 0.800221 | 1.595312e-48 | -8.615850e-47 |
| Msa0256440 | Msa0452900 | 0.823146 | 1.620601e-53 | -8.615850e-47 |
| Msa0256440 | Msa0453120 | 0.830780 | 2.421114e-55 | -8.615850e-47 |
| Msa0256440 | Msa0454910 | 0.802854 | 4.603172e-49 | -8.615850e-47 |
| Msa0256440 | Msa0456200 | 0.805243 | 1.466367e-49 | -8.615850e-47 |
| Msa0256440 | Msa0482620 | 0.806953 | 6.403612e-50 | -8.615850e-47 |
| Msa0256440 | Msa0491590 | 0.801090 | 1.060653e-48 | -8.615850e-47 |
| Msa0256440 | Msa0506270 | 0.804856 | 1.766989e-49 | -8.615850e-47 |
| Msa0256440 | Msa0564890 | 0.807167 | 5.770689e-50 | -8.615850e-47 |
| Msa0256440 | Msa0604350 | 0.813496 | 2.485839e-51 | -8.615850e-47 |
| Msa0256440 | Msa0627410 | 0.801187 | 1.013298e-48 | -8.615850e-47 |
| Msa0256440 | Msa0636170 | 0.804821 | 1.796862e-49 | -8.615850e-47 |
| Msa0256440 | Msa0726140 | 0.830382 | 3.030001e-55 | -8.615850e-47 |
| Msa0256440 | Msa0743810 | 0.814781 | 1.293409e-51 | -8.615850e-47 |
| Msa0256440 | Msa0745060 | 0.836796 | 7.583618e-57 | -8.615850e-47 |
| Msa0256440 | Msa0762360 | 0.813383 | 2.631582e-51 | -8.615850e-47 |
| Msa0256440 | Msa0764960 | 0.809379 | 1.948204e-50 | -8.615850e-47 |
| Msa0256440 | Msa0783160 | 0.816007 | 6.904526e-52 | -8.615850e-47 |
| Msa0256440 | Msa0789250 | 0.809751 | 1.620869e-50 | -8.615850e-47 |
| Msa0256440 | Msa0811080 | 0.803500 | 3.385016e-49 | -8.615850e-47 |
| Msa0256440 | Msa0825860 | 0.830750 | 2.462592e-55 | -8.615850e-47 |
| Msa0256440 | Msa0846330 | 0.814836 | 1.257937e-51 | -8.615850e-47 |
| Msa0256440 | Msa0846350 | 0.823548 | 1.305298e-53 | -8.615850e-47 |
| Msa0256440 | Msa0865320 | 0.817359 | 3.434844e-52 | -8.615850e-47 |
| Msa0256440 | Msa0885280 | 0.801496 | 8.760661e-49 | -8.615850e-47 |
| Msa0256440 | Msa0885290 | 0.821199 | 4.584870e-53 | -8.615850e-47 |
| Msa0256440 | Msa0981370 | 0.820318 | 7.309310e-53 | -8.615850e-47 |
| Msa0256440 | Msa0989060 | 0.809624 | 1.725675e-50 | -8.615850e-47 |
| Msa0256440 | Msa1016280 | 0.836323 | 1.000860e-56 | -8.615850e-47 |
| Msa0256440 | Msa1024240 | 0.820735 | 5.863597e-53 | -8.615850e-47 |
| Msa0256440 | Msa1025360 | 0.805447 | 1.329249e-49 | -8.615850e-47 |
| Msa0256440 | Msa1025370 | 0.823487 | 1.349189e-53 | -8.615850e-47 |
| Msa0256440 | Msa1044830 | 0.813920 | 2.005120e-51 | -8.615850e-47 |
| Msa0256440 | Msa1044840 | 0.811156 | 8.060996e-51 | -8.615850e-47 |
| Msa0256440 | Msa1092990 | 0.841403 | 4.852368e-58 | -8.615850e-47 |
| Msa0256440 | Msa1100980 | 0.802739 | 4.862559e-49 | -8.615850e-47 |
| Msa0256440 | Msa1136090 | 0.805447 | 1.329084e-49 | -8.615850e-47 |
| Msa0256440 | Msa1146110 | 0.816365 | 5.743029e-52 | -8.615850e-47 |
| Msa0256440 | Msa1160670 | 0.838068 | 3.581358e-57 | -8.615850e-47 |
| Msa0256440 | Msa1160690 | 0.807194 | 5.693129e-50 | -8.615850e-47 |
| Msa0256440 | Msa1187940 | 0.835995 | 1.212376e-56 | -8.615850e-47 |
| Msa0256440 | Msa1269670 | 0.821865 | 3.217444e-53 | -8.615850e-47 |
| Msa0256440 | Msa1270230 | 0.826571 | 2.522102e-54 | -8.615850e-47 |
| Msa0256440 | Msa1270240 | 0.811783 | 5.889263e-51 | -8.615850e-47 |
| Msa0256440 | Msa1283330 | 0.811759 | 5.963187e-51 | -8.615850e-47 |
| Msa0256440 | Msa1285930 | 0.803324 | 3.681137e-49 | -8.615850e-47 |
| Msa0256440 | Msa1287800 | 0.802670 | 5.024380e-49 | -8.615850e-47 |
| Msa0256440 | Msa1287810 | 0.815508 | 8.916785e-52 | -8.615850e-47 |
| Msa0256440 | Msa1297210 | 0.801096 | 1.058075e-48 | -8.615850e-47 |
| Msa0256440 | Msa1307890 | 0.812294 | 4.558693e-51 | -8.615850e-47 |
| Msa0256440 | Msa1320300 | 0.809147 | 2.184444e-50 | -8.615850e-47 |
| Msa0256440 | Msa1340590 | 0.805808 | 1.116422e-49 | -8.615850e-47 |
| Msa0256440 | Msa1402790 | 0.811947 | 5.426223e-51 | -8.615850e-47 |
| Msa0256440 | Msa1404000 | 0.817361 | 3.432638e-52 | -8.615850e-47 |
| Msa0256440 | Msa1415310 | 0.815454 | 9.167613e-52 | -8.615850e-47 |
| Msa0256440 | Msa1433120 | 0.832722 | 8.038971e-56 | -8.615850e-47 |
| Msa0256440 | Msa1438250 | 0.808142 | 3.581470e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256440 | MtrunA17_Chr3g0082011 | 45.333 | 225 | 62 | 4 | 1 | 168 | 1 | 221 | 2.54e-58 | 186 |
| Msa0256440 | MtrunA17_Chr4g0019271 | 47.926 | 217 | 52 | 4 | 4 | 168 | 19 | 226 | 1.59e-57 | 184 |
| Msa0256440 | MtrunA17_Chr2g0318001 | 94.805 | 77 | 4 | 0 | 1 | 77 | 1 | 77 | 6.29e-46 | 147 |
| Msa0256440 | MtrunA17_Chr7g0236811 | 40.237 | 169 | 44 | 4 | 2 | 120 | 3 | 164 | 4.56e-27 | 100 |
| Msa0256440 | MtrunA17_Chr3g0105221 | 31.188 | 202 | 83 | 8 | 1 | 157 | 21 | 211 | 3.18e-18 | 80.5 |
| Msa0256440 | MtrunA17_Chr6g0455961 | 30.660 | 212 | 86 | 8 | 4 | 157 | 18 | 226 | 6.70e-18 | 79.7 |
| Msa0256440 | MtrunA17_Chr7g0235401 | 31.818 | 198 | 83 | 5 | 1 | 153 | 1 | 191 | 3.62e-17 | 77.4 |
| Msa0256440 | MtrunA17_Chr7g0238881 | 29.545 | 220 | 86 | 6 | 7 | 168 | 24 | 232 | 6.43e-16 | 73.9 |
| Msa0256440 | MtrunA17_Chr4g0013651 | 29.885 | 174 | 62 | 5 | 2 | 123 | 26 | 191 | 1.42e-15 | 72.8 |
| Msa0256440 | MtrunA17_Chr4g0011441 | 27.778 | 198 | 100 | 5 | 1 | 156 | 35 | 231 | 4.52e-15 | 71.6 |
| Msa0256440 | MtrunA17_Chr7g0248641 | 39.669 | 121 | 52 | 5 | 2 | 107 | 4 | 118 | 8.51e-15 | 70.9 |
| Msa0256440 | MtrunA17_Chr7g0241021 | 27.638 | 199 | 85 | 6 | 5 | 146 | 21 | 217 | 8.92e-15 | 70.9 |
| Msa0256440 | MtrunA17_Chr7g0233501 | 31.220 | 205 | 75 | 7 | 1 | 152 | 15 | 206 | 1.77e-14 | 69.7 |
| Msa0256440 | MtrunA17_Chr4g0008881 | 25.604 | 207 | 103 | 5 | 1 | 156 | 1 | 207 | 1.83e-14 | 69.7 |
| Msa0256440 | MtrunA17_Chr7g0234261 | 27.805 | 205 | 82 | 6 | 2 | 152 | 17 | 209 | 3.60e-14 | 68.9 |
| Msa0256440 | MtrunA17_Chr2g0317991 | 96.552 | 29 | 1 | 0 | 140 | 168 | 1 | 29 | 6.05e-14 | 64.3 |
| Msa0256440 | MtrunA17_Chr2g0301311 | 29.187 | 209 | 86 | 6 | 2 | 157 | 19 | 218 | 1.34e-13 | 67.4 |
| Msa0256440 | MtrunA17_Chr3g0091301 | 60.000 | 60 | 23 | 1 | 2 | 60 | 19 | 78 | 1.48e-13 | 67.4 |
| Msa0256440 | MtrunA17_Chr7g0238801 | 31.507 | 146 | 81 | 3 | 4 | 137 | 19 | 157 | 2.44e-13 | 66.6 |
| Msa0256440 | MtrunA17_Chr4g0047811 | 50.820 | 61 | 29 | 1 | 4 | 63 | 9 | 69 | 2.46e-13 | 62.4 |
| Msa0256440 | MtrunA17_Chr7g0233491 | 27.313 | 227 | 89 | 8 | 1 | 168 | 15 | 224 | 3.57e-13 | 66.2 |
| Msa0256440 | MtrunA17_Chr7g0228821 | 29.500 | 200 | 77 | 6 | 4 | 147 | 20 | 211 | 4.31e-13 | 65.9 |
| Msa0256440 | MtrunA17_Chr4g0013691 | 24.752 | 202 | 102 | 6 | 5 | 158 | 8 | 207 | 5.25e-13 | 65.5 |
| Msa0256440 | MtrunA17_Chr7g0222501 | 46.377 | 69 | 34 | 2 | 5 | 70 | 22 | 90 | 5.73e-13 | 65.5 |
| Msa0256440 | MtrunA17_Chr7g0235731 | 30.435 | 184 | 96 | 6 | 5 | 162 | 21 | 198 | 6.67e-13 | 65.5 |
| Msa0256440 | MtrunA17_Chr7g0236001 | 49.315 | 73 | 35 | 2 | 5 | 76 | 17 | 88 | 7.17e-13 | 65.5 |
| Msa0256440 | MtrunA17_Chr1g0151131 | 38.636 | 88 | 48 | 2 | 1 | 82 | 3 | 90 | 1.41e-12 | 61.2 |
| Msa0256440 | MtrunA17_Chr3g0091431 | 58.621 | 58 | 23 | 1 | 2 | 58 | 19 | 76 | 1.99e-12 | 63.9 |
| Msa0256440 | MtrunA17_Chr7g0248001 | 30.045 | 223 | 86 | 10 | 4 | 156 | 25 | 247 | 2.20e-12 | 63.9 |
| Msa0256440 | MtrunA17_Chr1g0164641 | 69.444 | 36 | 11 | 0 | 133 | 168 | 1 | 36 | 2.35e-12 | 62.4 |
| Msa0256440 | MtrunA17_Chr2g0308131 | 29.050 | 179 | 97 | 5 | 2 | 151 | 14 | 191 | 4.67e-12 | 62.8 |
| Msa0256440 | MtrunA17_Chr7g0234961 | 52.542 | 59 | 28 | 0 | 5 | 63 | 12 | 70 | 6.63e-12 | 61.6 |
| Msa0256440 | MtrunA17_Chr2g0301331 | 47.761 | 67 | 34 | 1 | 2 | 68 | 22 | 87 | 9.26e-12 | 60.1 |
| Msa0256440 | MtrunA17_Chr7g0257571 | 28.502 | 207 | 87 | 8 | 5 | 158 | 30 | 228 | 9.56e-12 | 62.0 |
| Msa0256440 | MtrunA17_Chr3g0114671 | 29.358 | 218 | 88 | 7 | 5 | 165 | 18 | 226 | 9.91e-12 | 62.0 |
| Msa0256440 | MtrunA17_Chr7g0234941 | 52.542 | 59 | 28 | 0 | 5 | 63 | 12 | 70 | 1.16e-11 | 62.0 |
| Msa0256440 | MtrunA17_Chr7g0234911 | 52.542 | 59 | 28 | 0 | 5 | 63 | 12 | 70 | 1.23e-11 | 61.6 |
| Msa0256440 | MtrunA17_Chr2g0303281 | 27.861 | 201 | 90 | 6 | 3 | 156 | 7 | 199 | 1.47e-11 | 61.6 |
| Msa0256440 | MtrunA17_Chr8g0366331 | 28.141 | 199 | 88 | 7 | 2 | 146 | 19 | 216 | 2.18e-11 | 60.8 |
| Msa0256440 | MtrunA17_Chr2g0303301 | 25.373 | 201 | 88 | 6 | 4 | 152 | 19 | 209 | 2.46e-11 | 60.8 |
| Msa0256440 | MtrunA17_Chr7g0248561 | 50.667 | 75 | 31 | 3 | 4 | 76 | 7 | 77 | 2.59e-11 | 60.8 |
| Msa0256440 | MtrunA17_Chr4g0013771 | 48.148 | 54 | 27 | 1 | 6 | 58 | 14 | 67 | 2.84e-11 | 60.8 |
| Msa0256440 | MtrunA17_Chr6g0459941 | 53.448 | 58 | 26 | 1 | 4 | 60 | 6 | 63 | 3.49e-11 | 60.5 |
| Msa0256440 | MtrunA17_Chr4g0013801 | 44.068 | 59 | 32 | 1 | 1 | 58 | 9 | 67 | 4.05e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 42 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCAAATTTGGTGAATCTT+TGG | 0.219019 | 2_2:-51199069 | None:intergenic |
| GGATTGTACAACACAGAAAT+TGG | 0.239437 | 2_2:+51200585 | Msa0256440:CDS |
| ATGATGACGATGAAGAAATT+TGG | 0.251534 | 2_2:+51198837 | Msa0256440:CDS |
| GATAGGTGGTGGTTGTGTTT+TGG | 0.278694 | 2_2:+51200563 | Msa0256440:intron |
| GGAGGCATGATACTCAAATT+TGG | 0.324454 | 2_2:-51199080 | None:intergenic |
| CCAAGTAGAATTGGAAAATC+AGG | 0.364988 | 2_2:-51200661 | None:intergenic |
| ATTAAATGACGCACCATGTA+TGG | 0.391207 | 2_2:-51198869 | None:intergenic |
| AGAGTGCCTCCAAGTAGAAT+TGG | 0.418993 | 2_2:-51200670 | None:intergenic |
| TTGGATCTTAAACGTAAAGT+AGG | 0.425132 | 2_2:-51199050 | None:intergenic |
| ATTGCATGGGAGATAGTTGT+TGG | 0.439194 | 2_2:+51200620 | Msa0256440:CDS |
| TGATGACGATGAAGAAATTT+GGG | 0.441950 | 2_2:+51198838 | Msa0256440:CDS |
| TGGTCCAGCTTTACGTCCTT+AGG | 0.453509 | 2_2:-51199101 | None:intergenic |
| GCCTCCTAAGGACGTAAAGC+TGG | 0.465817 | 2_2:+51199097 | Msa0256440:CDS |
| CAACATCACGTAAGGTAAGT+AGG | 0.466001 | 2_2:-51198814 | Msa0256430:intron |
| GACCAGGTAAACCTTGGATT+CGG | 0.480294 | 2_2:+51199119 | Msa0256440:CDS |
| ATGAGATCGGGAAGAAGAAC+GGG | 0.491825 | 2_2:-51198656 | Msa0256430:intron |
| AGCCGAATCCAAGGTTTACC+TGG | 0.498734 | 2_2:-51199121 | None:intergenic |
| CTCGTTGGACCATTCGTGAA+TGG | 0.511937 | 2_2:+51200691 | Msa0256440:CDS |
| ATGATTTCCACAATGAGATC+GGG | 0.517045 | 2_2:-51198668 | Msa0256430:intron |
| TATGATTTCCACAATGAGAT+CGG | 0.525649 | 2_2:-51198669 | Msa0256430:intron |
| TTTGAGTATCATGCCTCCTA+AGG | 0.536616 | 2_2:+51199085 | Msa0256440:CDS |
| AATCTCACGACGGGTTTCAA+CGG | 0.548431 | 2_2:-51198701 | Msa0256430:intron |
| AACATCACGTAAGGTAAGTA+GGG | 0.554749 | 2_2:-51198813 | Msa0256430:intron |
| TCATTGTGGAAATCATATCA+TGG | 0.559391 | 2_2:+51198675 | Msa0256440:CDS |
| TCTTCTTCCCGATCTCATTG+TGG | 0.563405 | 2_2:+51198661 | Msa0256440:CDS |
| ACACTATTAAATCTCACGAC+GGG | 0.569170 | 2_2:-51198710 | Msa0256430:intron |
| CAAGTAGAATTGGAAAATCA+GGG | 0.574920 | 2_2:-51200660 | None:intergenic |
| GTCATCATCAACATCACGTA+AGG | 0.575919 | 2_2:-51198822 | Msa0256430:intron |
| AATCATCATAGCCGAATCCA+AGG | 0.580221 | 2_2:-51199130 | None:intergenic |
| AAGCTGGACCAGGTAAACCT+TGG | 0.580690 | 2_2:+51199113 | Msa0256440:CDS |
| AATGAGATCGGGAAGAAGAA+CGG | 0.584683 | 2_2:-51198657 | Msa0256430:intron |
| GGAGGGCAGAGTTCATTGCA+TGG | 0.584740 | 2_2:+51200606 | Msa0256440:CDS |
| CTACTTGGAGGCACTCTCGT+TGG | 0.586844 | 2_2:+51200676 | Msa0256440:CDS |
| GAGGGCAGAGTTCATTGCAT+GGG | 0.590963 | 2_2:+51200607 | Msa0256440:CDS |
| TTGGGTCGTAGCTCCATACA+TGG | 0.600038 | 2_2:+51198856 | Msa0256440:CDS |
| TCCAGCTTTACGTCCTTAGG+AGG | 0.604657 | 2_2:-51199098 | None:intergenic |
| TTGTACAACACAGAAATTGG+AGG | 0.614660 | 2_2:+51200588 | Msa0256440:CDS |
| CGTAAGGTAAGTAGGGTGTG+TGG | 0.638724 | 2_2:-51198806 | Msa0256430:intron |
| TGTACAACACAGAAATTGGA+GGG | 0.645112 | 2_2:+51200589 | Msa0256440:CDS |
| TAAGGACGTAAAGCTGGACC+AGG | 0.645453 | 2_2:+51199103 | Msa0256440:CDS |
| AACACTATTAAATCTCACGA+CGG | 0.652111 | 2_2:-51198711 | Msa0256430:intron |
| TTAACACTACCATTCACGAA+TGG | 0.692669 | 2_2:-51200700 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAATGATTATTATACAAT+AGG | + | chr2_2:51198944-51198963 | Msa0256440:intron | 15.0% |
| !! | GTAAAAAGAAAAAAAAAACA+TGG | + | chr2_2:51198996-51199015 | Msa0256440:intron | 15.0% |
| !!! | TTAATTGCAAAAGTATAATT+CGG | + | chr2_2:51199782-51199801 | Msa0256440:intron | 15.0% |
| !! | AAAACAACATATATTTAAAC+AGG | - | chr2_2:51200178-51200197 | None:intergenic | 15.0% |
| !! | ATTGAAGTTATAAAAAAAGT+GGG | + | chr2_2:51200418-51200437 | Msa0256440:intron | 15.0% |
| !! | AACAATGATTATTATACAAT+AGG | + | chr2_2:51198944-51198963 | Msa0256440:intron | 15.0% |
| !! | GTAAAAAGAAAAAAAAAACA+TGG | + | chr2_2:51198996-51199015 | Msa0256440:intron | 15.0% |
| !!! | TTAATTGCAAAAGTATAATT+CGG | + | chr2_2:51199782-51199801 | Msa0256440:intron | 15.0% |
| !! | AAAACAACATATATTTAAAC+AGG | - | chr2_2:51200178-51200197 | None:intergenic | 15.0% |
| !! | ATTGAAGTTATAAAAAAAGT+GGG | + | chr2_2:51200418-51200437 | Msa0256440:intron | 15.0% |
| !!! | TATTATATATAGGTTCTAAC+CGG | - | chr2_2:51199468-51199487 | None:intergenic | 20.0% |
| !! | GTTAGAACCTATATATAATA+TGG | + | chr2_2:51199468-51199487 | Msa0256440:intron | 20.0% |
| !! | AAGCTAACCATATTATATAT+AGG | - | chr2_2:51199478-51199497 | None:intergenic | 20.0% |
| !! | AGCATTTGATTAATTTATAG+TGG | + | chr2_2:51199964-51199983 | Msa0256440:intron | 20.0% |
| !! | CATTGAAGTTATAAAAAAAG+TGG | + | chr2_2:51200417-51200436 | Msa0256440:intron | 20.0% |
| !! | AGTAATAAATTATTGCACAT+TGG | + | chr2_2:51200460-51200479 | Msa0256440:intron | 20.0% |
| !!! | TATTATATATAGGTTCTAAC+CGG | - | chr2_2:51199468-51199487 | None:intergenic | 20.0% |
| !! | GTTAGAACCTATATATAATA+TGG | + | chr2_2:51199468-51199487 | Msa0256440:intron | 20.0% |
| !! | AAGCTAACCATATTATATAT+AGG | - | chr2_2:51199478-51199497 | None:intergenic | 20.0% |
| !! | AGCATTTGATTAATTTATAG+TGG | + | chr2_2:51199964-51199983 | Msa0256440:intron | 20.0% |
| !! | CATTGAAGTTATAAAAAAAG+TGG | + | chr2_2:51200417-51200436 | Msa0256440:intron | 20.0% |
| !! | AGTAATAAATTATTGCACAT+TGG | + | chr2_2:51200460-51200479 | Msa0256440:intron | 20.0% |
| !! | TGATTTTACTGATACATACA+AGG | + | chr2_2:51199148-51199167 | Msa0256440:CDS | 25.0% |
| ! | ATCTCACAATAACATCAATT+AGG | + | chr2_2:51199336-51199355 | Msa0256440:intron | 25.0% |
| ! | TCTCACAATAACATCAATTA+GGG | + | chr2_2:51199337-51199356 | Msa0256440:intron | 25.0% |
| ! | CATATAATTACAGACTTATG+AGG | + | chr2_2:51199435-51199454 | Msa0256440:intron | 25.0% |
| ! | AATCATATGTTCAATAGCTT+TGG | + | chr2_2:51199545-51199564 | Msa0256440:intron | 25.0% |
| ! | AAAAACATCTTGAACATTTG+TGG | + | chr2_2:51199640-51199659 | Msa0256440:intron | 25.0% |
| ! | CAAATGCTAATCACATATTT+GGG | - | chr2_2:51199952-51199971 | None:intergenic | 25.0% |
| ! | TCAAATGCTAATCACATATT+TGG | - | chr2_2:51199953-51199972 | None:intergenic | 25.0% |
| ! | ACCTAATTAGTAAGTAACTA+TGG | + | chr2_2:51200045-51200064 | Msa0256440:intron | 25.0% |
| ! | TCCATAGTTACTTACTAATT+AGG | - | chr2_2:51200049-51200068 | None:intergenic | 25.0% |
| !! | ATCTGTTTATTGGTTAAGTA+TGG | + | chr2_2:51200217-51200236 | Msa0256440:intron | 25.0% |
| !! | TTTTATTCCCCTTCTATTTT+TGG | + | chr2_2:51200304-51200323 | Msa0256440:intron | 25.0% |
| !! | TTTTGTAATATGCATTTCCT+TGG | + | chr2_2:51200339-51200358 | Msa0256440:intron | 25.0% |
| ! | GCACATACAATTAATTTCTT+TGG | + | chr2_2:51200517-51200536 | Msa0256440:intron | 25.0% |
| ! | TTCTCTATTTAATCCATGAT+AGG | + | chr2_2:51200546-51200565 | Msa0256440:intron | 25.0% |
| !! | TGATTTTACTGATACATACA+AGG | + | chr2_2:51199148-51199167 | Msa0256440:CDS | 25.0% |
| ! | ATCTCACAATAACATCAATT+AGG | + | chr2_2:51199336-51199355 | Msa0256440:intron | 25.0% |
| ! | TCTCACAATAACATCAATTA+GGG | + | chr2_2:51199337-51199356 | Msa0256440:intron | 25.0% |
| ! | CATATAATTACAGACTTATG+AGG | + | chr2_2:51199435-51199454 | Msa0256440:intron | 25.0% |
| ! | AATCATATGTTCAATAGCTT+TGG | + | chr2_2:51199545-51199564 | Msa0256440:intron | 25.0% |
| ! | AAAAACATCTTGAACATTTG+TGG | + | chr2_2:51199640-51199659 | Msa0256440:intron | 25.0% |
| ! | CAAATGCTAATCACATATTT+GGG | - | chr2_2:51199952-51199971 | None:intergenic | 25.0% |
| ! | TCAAATGCTAATCACATATT+TGG | - | chr2_2:51199953-51199972 | None:intergenic | 25.0% |
| ! | ACCTAATTAGTAAGTAACTA+TGG | + | chr2_2:51200045-51200064 | Msa0256440:intron | 25.0% |
| ! | TCCATAGTTACTTACTAATT+AGG | - | chr2_2:51200049-51200068 | None:intergenic | 25.0% |
| !! | ATCTGTTTATTGGTTAAGTA+TGG | + | chr2_2:51200217-51200236 | Msa0256440:intron | 25.0% |
| !! | TTTTATTCCCCTTCTATTTT+TGG | + | chr2_2:51200304-51200323 | Msa0256440:intron | 25.0% |
| !! | TTTTGTAATATGCATTTCCT+TGG | + | chr2_2:51200339-51200358 | Msa0256440:intron | 25.0% |
| ! | GCACATACAATTAATTTCTT+TGG | + | chr2_2:51200517-51200536 | Msa0256440:intron | 25.0% |
| ! | TTCTCTATTTAATCCATGAT+AGG | + | chr2_2:51200546-51200565 | Msa0256440:intron | 25.0% |
| TATGATTTCCACAATGAGAT+CGG | - | chr2_2:51198672-51198691 | Msa0256430:intron | 30.0% | |
| TCATTGTGGAAATCATATCA+TGG | + | chr2_2:51198675-51198694 | Msa0256440:CDS | 30.0% | |
| AACACTATTAAATCTCACGA+CGG | - | chr2_2:51198714-51198733 | Msa0256430:intron | 30.0% | |
| ! | GGTGAAGTTTTGCAAATTTT+GGG | - | chr2_2:51198766-51198785 | Msa0256430:intron | 30.0% |
| ! | AGGTGAAGTTTTGCAAATTT+TGG | - | chr2_2:51198767-51198786 | Msa0256430:intron | 30.0% |
| !!! | GATTTTTAGGTGATCTTTGA+AGG | - | chr2_2:51198787-51198806 | Msa0256430:intron | 30.0% |
| ! | ATGATGACGATGAAGAAATT+TGG | + | chr2_2:51198837-51198856 | Msa0256440:CDS | 30.0% |
| ! | TGATGACGATGAAGAAATTT+GGG | + | chr2_2:51198838-51198857 | Msa0256440:CDS | 30.0% |
| TATACAATAGGCTCTATCAA+TGG | + | chr2_2:51198956-51198975 | Msa0256440:intron | 30.0% | |
| TTGGATCTTAAACGTAAAGT+AGG | - | chr2_2:51199053-51199072 | None:intergenic | 30.0% | |
| ! | ACTCAAATTTGGTGAATCTT+TGG | - | chr2_2:51199072-51199091 | None:intergenic | 30.0% |
| !!! | TTTGGTCAAACTGCTATTTT+CGG | + | chr2_2:51199397-51199416 | Msa0256440:intron | 30.0% |
| ATAATTACAGACTTATGAGG+AGG | + | chr2_2:51199438-51199457 | Msa0256440:intron | 30.0% | |
| ! | GATCAAATGCAATTTTTCCA+TGG | - | chr2_2:51199716-51199735 | None:intergenic | 30.0% |
| TTTGCAATTAAGTACTCTTG+TGG | - | chr2_2:51199773-51199792 | None:intergenic | 30.0% | |
| CCAAAATAATCAGTCATAGA+GGG | + | chr2_2:51199846-51199865 | Msa0256440:intron | 30.0% | |
| CAAAATAATCAGTCATAGAG+GGG | + | chr2_2:51199847-51199866 | Msa0256440:intron | 30.0% | |
| AGAGTTACTGTATCAAATGA+GGG | + | chr2_2:51199891-51199910 | Msa0256440:intron | 30.0% | |
| ! | CTAAGAATACTAGTTGATTC+TGG | + | chr2_2:51200129-51200148 | Msa0256440:intron | 30.0% |
| AAAAAAAGTGGGACACATAA+TGG | + | chr2_2:51200429-51200448 | Msa0256440:intron | 30.0% | |
| TCTATTTAATCCATGATAGG+TGG | + | chr2_2:51200549-51200568 | Msa0256440:intron | 30.0% | |
| CAAGTAGAATTGGAAAATCA+GGG | - | chr2_2:51200663-51200682 | None:intergenic | 30.0% | |
| TATGATTTCCACAATGAGAT+CGG | - | chr2_2:51198672-51198691 | Msa0256430:intron | 30.0% | |
| TCATTGTGGAAATCATATCA+TGG | + | chr2_2:51198675-51198694 | Msa0256440:CDS | 30.0% | |
| AACACTATTAAATCTCACGA+CGG | - | chr2_2:51198714-51198733 | Msa0256430:intron | 30.0% | |
| ! | GGTGAAGTTTTGCAAATTTT+GGG | - | chr2_2:51198766-51198785 | Msa0256430:intron | 30.0% |
| ! | AGGTGAAGTTTTGCAAATTT+TGG | - | chr2_2:51198767-51198786 | Msa0256430:intron | 30.0% |
| !!! | GATTTTTAGGTGATCTTTGA+AGG | - | chr2_2:51198787-51198806 | Msa0256430:intron | 30.0% |
| ! | ATGATGACGATGAAGAAATT+TGG | + | chr2_2:51198837-51198856 | Msa0256440:CDS | 30.0% |
| ! | TGATGACGATGAAGAAATTT+GGG | + | chr2_2:51198838-51198857 | Msa0256440:CDS | 30.0% |
| TATACAATAGGCTCTATCAA+TGG | + | chr2_2:51198956-51198975 | Msa0256440:intron | 30.0% | |
| TTGGATCTTAAACGTAAAGT+AGG | - | chr2_2:51199053-51199072 | None:intergenic | 30.0% | |
| ! | ACTCAAATTTGGTGAATCTT+TGG | - | chr2_2:51199072-51199091 | None:intergenic | 30.0% |
| !!! | TTTGGTCAAACTGCTATTTT+CGG | + | chr2_2:51199397-51199416 | Msa0256440:intron | 30.0% |
| ATAATTACAGACTTATGAGG+AGG | + | chr2_2:51199438-51199457 | Msa0256440:intron | 30.0% | |
| ! | GATCAAATGCAATTTTTCCA+TGG | - | chr2_2:51199716-51199735 | None:intergenic | 30.0% |
| TTTGCAATTAAGTACTCTTG+TGG | - | chr2_2:51199773-51199792 | None:intergenic | 30.0% | |
| CCAAAATAATCAGTCATAGA+GGG | + | chr2_2:51199846-51199865 | Msa0256440:intron | 30.0% | |
| CAAAATAATCAGTCATAGAG+GGG | + | chr2_2:51199847-51199866 | Msa0256440:intron | 30.0% | |
| AGAGTTACTGTATCAAATGA+GGG | + | chr2_2:51199891-51199910 | Msa0256440:intron | 30.0% | |
| ! | CTAAGAATACTAGTTGATTC+TGG | + | chr2_2:51200129-51200148 | Msa0256440:intron | 30.0% |
| AAAAAAAGTGGGACACATAA+TGG | + | chr2_2:51200429-51200448 | Msa0256440:intron | 30.0% | |
| TCTATTTAATCCATGATAGG+TGG | + | chr2_2:51200549-51200568 | Msa0256440:intron | 30.0% | |
| CAAGTAGAATTGGAAAATCA+GGG | - | chr2_2:51200663-51200682 | None:intergenic | 30.0% | |
| ATGATTTCCACAATGAGATC+GGG | - | chr2_2:51198671-51198690 | Msa0256430:intron | 35.0% | |
| ACACTATTAAATCTCACGAC+GGG | - | chr2_2:51198713-51198732 | Msa0256430:intron | 35.0% | |
| AACATCACGTAAGGTAAGTA+GGG | - | chr2_2:51198816-51198835 | Msa0256430:intron | 35.0% | |
| ATTAAATGACGCACCATGTA+TGG | - | chr2_2:51198872-51198891 | None:intergenic | 35.0% | |
| CAGAAATTTGTACTCAGTTC+TGG | + | chr2_2:51199024-51199043 | Msa0256440:intron | 35.0% | |
| TTCACTTAAAGTTGTGCAAG+AGG | - | chr2_2:51199524-51199543 | None:intergenic | 35.0% | |
| CTATGTTGTACAACATGACT+GGG | - | chr2_2:51199620-51199639 | None:intergenic | 35.0% | |
| TCTATGTTGTACAACATGAC+TGG | - | chr2_2:51199621-51199640 | None:intergenic | 35.0% | |
| ATCTTGAACATTTGTGGTTG+AGG | + | chr2_2:51199646-51199665 | Msa0256440:intron | 35.0% | |
| GCCAAAATAATCAGTCATAG+AGG | + | chr2_2:51199845-51199864 | Msa0256440:intron | 35.0% | |
| ! | CCCTCTATGACTGATTATTT+TGG | - | chr2_2:51199849-51199868 | None:intergenic | 35.0% |
| GAGAGTTACTGTATCAAATG+AGG | + | chr2_2:51199890-51199909 | Msa0256440:intron | 35.0% | |
| TTTGCTGCTGATCTGTTTAT+TGG | + | chr2_2:51200207-51200226 | Msa0256440:intron | 35.0% | |
| ! | TAAGTATGGAGTTGATTGTC+TGG | + | chr2_2:51200231-51200250 | Msa0256440:intron | 35.0% |
| TAGAAGGGGAATAAAACTTC+TGG | - | chr2_2:51200300-51200319 | None:intergenic | 35.0% | |
| ACAACCAGCCAAAAATAGAA+GGG | - | chr2_2:51200315-51200334 | None:intergenic | 35.0% | |
| TACAACCAGCCAAAAATAGA+AGG | - | chr2_2:51200316-51200335 | None:intergenic | 35.0% | |
| ! | AATATGCATTTCCTTGGTGT+TGG | + | chr2_2:51200345-51200364 | Msa0256440:intron | 35.0% |
| ATCTCTTATGCTTGAACTCT+AGG | + | chr2_2:51200376-51200395 | Msa0256440:intron | 35.0% | |
| ATTTAATCCATGATAGGTGG+TGG | + | chr2_2:51200552-51200571 | Msa0256440:intron | 35.0% | |
| GGATTGTACAACACAGAAAT+TGG | + | chr2_2:51200585-51200604 | Msa0256440:CDS | 35.0% | |
| TTGTACAACACAGAAATTGG+AGG | + | chr2_2:51200588-51200607 | Msa0256440:CDS | 35.0% | |
| TGTACAACACAGAAATTGGA+GGG | + | chr2_2:51200589-51200608 | Msa0256440:CDS | 35.0% | |
| CCAAGTAGAATTGGAAAATC+AGG | - | chr2_2:51200664-51200683 | None:intergenic | 35.0% | |
| ! | CCTGATTTTCCAATTCTACT+TGG | + | chr2_2:51200661-51200680 | Msa0256440:CDS | 35.0% |
| ! | GATTTTCCAATTCTACTTGG+AGG | + | chr2_2:51200664-51200683 | Msa0256440:CDS | 35.0% |
| ATGATTTCCACAATGAGATC+GGG | - | chr2_2:51198671-51198690 | Msa0256430:intron | 35.0% | |
| ACACTATTAAATCTCACGAC+GGG | - | chr2_2:51198713-51198732 | Msa0256430:intron | 35.0% | |
| AACATCACGTAAGGTAAGTA+GGG | - | chr2_2:51198816-51198835 | Msa0256430:intron | 35.0% | |
| ATTAAATGACGCACCATGTA+TGG | - | chr2_2:51198872-51198891 | None:intergenic | 35.0% | |
| CAGAAATTTGTACTCAGTTC+TGG | + | chr2_2:51199024-51199043 | Msa0256440:intron | 35.0% | |
| TTCACTTAAAGTTGTGCAAG+AGG | - | chr2_2:51199524-51199543 | None:intergenic | 35.0% | |
| CTATGTTGTACAACATGACT+GGG | - | chr2_2:51199620-51199639 | None:intergenic | 35.0% | |
| TCTATGTTGTACAACATGAC+TGG | - | chr2_2:51199621-51199640 | None:intergenic | 35.0% | |
| ATCTTGAACATTTGTGGTTG+AGG | + | chr2_2:51199646-51199665 | Msa0256440:intron | 35.0% | |
| GCCAAAATAATCAGTCATAG+AGG | + | chr2_2:51199845-51199864 | Msa0256440:intron | 35.0% | |
| ! | CCCTCTATGACTGATTATTT+TGG | - | chr2_2:51199849-51199868 | None:intergenic | 35.0% |
| GAGAGTTACTGTATCAAATG+AGG | + | chr2_2:51199890-51199909 | Msa0256440:intron | 35.0% | |
| TTTGCTGCTGATCTGTTTAT+TGG | + | chr2_2:51200207-51200226 | Msa0256440:intron | 35.0% | |
| ! | TAAGTATGGAGTTGATTGTC+TGG | + | chr2_2:51200231-51200250 | Msa0256440:intron | 35.0% |
| TAGAAGGGGAATAAAACTTC+TGG | - | chr2_2:51200300-51200319 | None:intergenic | 35.0% | |
| ACAACCAGCCAAAAATAGAA+GGG | - | chr2_2:51200315-51200334 | None:intergenic | 35.0% | |
| TACAACCAGCCAAAAATAGA+AGG | - | chr2_2:51200316-51200335 | None:intergenic | 35.0% | |
| ! | AATATGCATTTCCTTGGTGT+TGG | + | chr2_2:51200345-51200364 | Msa0256440:intron | 35.0% |
| ATCTCTTATGCTTGAACTCT+AGG | + | chr2_2:51200376-51200395 | Msa0256440:intron | 35.0% | |
| ATTTAATCCATGATAGGTGG+TGG | + | chr2_2:51200552-51200571 | Msa0256440:intron | 35.0% | |
| GGATTGTACAACACAGAAAT+TGG | + | chr2_2:51200585-51200604 | Msa0256440:CDS | 35.0% | |
| TTGTACAACACAGAAATTGG+AGG | + | chr2_2:51200588-51200607 | Msa0256440:CDS | 35.0% | |
| TGTACAACACAGAAATTGGA+GGG | + | chr2_2:51200589-51200608 | Msa0256440:CDS | 35.0% | |
| CCAAGTAGAATTGGAAAATC+AGG | - | chr2_2:51200664-51200683 | None:intergenic | 35.0% | |
| ! | CCTGATTTTCCAATTCTACT+TGG | + | chr2_2:51200661-51200680 | Msa0256440:CDS | 35.0% |
| ! | GATTTTCCAATTCTACTTGG+AGG | + | chr2_2:51200664-51200683 | Msa0256440:CDS | 35.0% |
| AATGAGATCGGGAAGAAGAA+CGG | - | chr2_2:51198660-51198679 | Msa0256430:intron | 40.0% | |
| ! | AGTAGGGTGTGTGGATTTTT+AGG | - | chr2_2:51198800-51198819 | Msa0256430:intron | 40.0% |
| CAACATCACGTAAGGTAAGT+AGG | - | chr2_2:51198817-51198836 | Msa0256430:intron | 40.0% | |
| GTCATCATCAACATCACGTA+AGG | - | chr2_2:51198825-51198844 | Msa0256430:CDS | 40.0% | |
| CTTCTTCAACAACAGACGAT+GGG | - | chr2_2:51198901-51198920 | None:intergenic | 40.0% | |
| TCTTCTTCAACAACAGACGA+TGG | - | chr2_2:51198902-51198921 | None:intergenic | 40.0% | |
| AATAGGCTCTATCAATGGCT+TGG | + | chr2_2:51198961-51198980 | Msa0256440:intron | 40.0% | |
| !! | AATGGCTTGGTCTGTTTGAT+CGG | + | chr2_2:51198974-51198993 | Msa0256440:intron | 40.0% |
| ! | GGAGGCATGATACTCAAATT+TGG | - | chr2_2:51199083-51199102 | None:intergenic | 40.0% |
| TTTGAGTATCATGCCTCCTA+AGG | + | chr2_2:51199085-51199104 | Msa0256440:CDS | 40.0% | |
| AATCATCATAGCCGAATCCA+AGG | - | chr2_2:51199133-51199152 | None:intergenic | 40.0% | |
| CAATGTCTAACATGCTGAAG+AGG | - | chr2_2:51199675-51199694 | None:intergenic | 40.0% | |
| CATACTGATCATTCAGTCCA+TGG | + | chr2_2:51199696-51199715 | Msa0256440:intron | 40.0% | |
| TTCTAGTGTTTCGGAGAGAA+AGG | - | chr2_2:51199744-51199763 | None:intergenic | 40.0% | |
| TGGTGGTCATTCTAGTGTTT+CGG | - | chr2_2:51199753-51199772 | None:intergenic | 40.0% | |
| GCAATTAAGTACTCTTGTGG+TGG | - | chr2_2:51199770-51199789 | None:intergenic | 40.0% | |
| GGTCATCTTGCTTAATCAGA+TGG | + | chr2_2:51199868-51199887 | Msa0256440:intron | 40.0% | |
| AATGAGGGAACAAAAGAGAG+AGG | + | chr2_2:51199906-51199925 | Msa0256440:intron | 40.0% | |
| ATGAGGGAACAAAAGAGAGA+GGG | + | chr2_2:51199907-51199926 | Msa0256440:intron | 40.0% | |
| TGCTAATCACATATTTGGGC+AGG | - | chr2_2:51199948-51199967 | None:intergenic | 40.0% | |
| ! | ATGGAGTTGATTGTCTGGTT+TGG | + | chr2_2:51200236-51200255 | Msa0256440:intron | 40.0% |
| !!! | ATTCCCCTTCTATTTTTGGC+TGG | + | chr2_2:51200308-51200327 | Msa0256440:intron | 40.0% |
| CAACCAGCCAAAAATAGAAG+GGG | - | chr2_2:51200314-51200333 | None:intergenic | 40.0% | |
| !! | ATAGGTGGTGGTTGTGTTTT+GGG | + | chr2_2:51200564-51200583 | Msa0256440:intron | 40.0% |
| ATTGCATGGGAGATAGTTGT+TGG | + | chr2_2:51200620-51200639 | Msa0256440:CDS | 40.0% | |
| AATGAGATCGGGAAGAAGAA+CGG | - | chr2_2:51198660-51198679 | Msa0256430:intron | 40.0% | |
| ! | AGTAGGGTGTGTGGATTTTT+AGG | - | chr2_2:51198800-51198819 | Msa0256430:intron | 40.0% |
| CAACATCACGTAAGGTAAGT+AGG | - | chr2_2:51198817-51198836 | Msa0256430:intron | 40.0% | |
| GTCATCATCAACATCACGTA+AGG | - | chr2_2:51198825-51198844 | Msa0256430:CDS | 40.0% | |
| CTTCTTCAACAACAGACGAT+GGG | - | chr2_2:51198901-51198920 | None:intergenic | 40.0% | |
| TCTTCTTCAACAACAGACGA+TGG | - | chr2_2:51198902-51198921 | None:intergenic | 40.0% | |
| AATAGGCTCTATCAATGGCT+TGG | + | chr2_2:51198961-51198980 | Msa0256440:intron | 40.0% | |
| !! | AATGGCTTGGTCTGTTTGAT+CGG | + | chr2_2:51198974-51198993 | Msa0256440:intron | 40.0% |
| ! | GGAGGCATGATACTCAAATT+TGG | - | chr2_2:51199083-51199102 | None:intergenic | 40.0% |
| TTTGAGTATCATGCCTCCTA+AGG | + | chr2_2:51199085-51199104 | Msa0256440:CDS | 40.0% | |
| AATCATCATAGCCGAATCCA+AGG | - | chr2_2:51199133-51199152 | None:intergenic | 40.0% | |
| CAATGTCTAACATGCTGAAG+AGG | - | chr2_2:51199675-51199694 | None:intergenic | 40.0% | |
| CATACTGATCATTCAGTCCA+TGG | + | chr2_2:51199696-51199715 | Msa0256440:intron | 40.0% | |
| TTCTAGTGTTTCGGAGAGAA+AGG | - | chr2_2:51199744-51199763 | None:intergenic | 40.0% | |
| TGGTGGTCATTCTAGTGTTT+CGG | - | chr2_2:51199753-51199772 | None:intergenic | 40.0% | |
| GCAATTAAGTACTCTTGTGG+TGG | - | chr2_2:51199770-51199789 | None:intergenic | 40.0% | |
| GGTCATCTTGCTTAATCAGA+TGG | + | chr2_2:51199868-51199887 | Msa0256440:intron | 40.0% | |
| AATGAGGGAACAAAAGAGAG+AGG | + | chr2_2:51199906-51199925 | Msa0256440:intron | 40.0% | |
| ATGAGGGAACAAAAGAGAGA+GGG | + | chr2_2:51199907-51199926 | Msa0256440:intron | 40.0% | |
| TGCTAATCACATATTTGGGC+AGG | - | chr2_2:51199948-51199967 | None:intergenic | 40.0% | |
| ! | ATGGAGTTGATTGTCTGGTT+TGG | + | chr2_2:51200236-51200255 | Msa0256440:intron | 40.0% |
| !!! | ATTCCCCTTCTATTTTTGGC+TGG | + | chr2_2:51200308-51200327 | Msa0256440:intron | 40.0% |
| CAACCAGCCAAAAATAGAAG+GGG | - | chr2_2:51200314-51200333 | None:intergenic | 40.0% | |
| !! | ATAGGTGGTGGTTGTGTTTT+GGG | + | chr2_2:51200564-51200583 | Msa0256440:intron | 40.0% |
| ATTGCATGGGAGATAGTTGT+TGG | + | chr2_2:51200620-51200639 | Msa0256440:CDS | 40.0% | |
| ATGAGATCGGGAAGAAGAAC+GGG | - | chr2_2:51198659-51198678 | Msa0256430:intron | 45.0% | |
| TCTTCTTCCCGATCTCATTG+TGG | + | chr2_2:51198661-51198680 | Msa0256440:CDS | 45.0% | |
| ! | AATCTCACGACGGGTTTCAA+CGG | - | chr2_2:51198704-51198723 | Msa0256430:intron | 45.0% |
| GACCAGGTAAACCTTGGATT+CGG | + | chr2_2:51199119-51199138 | Msa0256440:CDS | 45.0% | |
| AGCTTCGCTATATAGCACTG+TGG | + | chr2_2:51199364-51199383 | Msa0256440:intron | 45.0% | |
| CACTGTGGCATAGCAGAATT+TGG | + | chr2_2:51199379-51199398 | Msa0256440:intron | 45.0% | |
| AGACTTATGAGGAGGAAGAC+CGG | + | chr2_2:51199446-51199465 | Msa0256440:intron | 45.0% | |
| GATGTACAAGTCCAACACCA+AGG | - | chr2_2:51200359-51200378 | None:intergenic | 45.0% | |
| AACACAACCACCACCTATCA+TGG | - | chr2_2:51200562-51200581 | None:intergenic | 45.0% | |
| !! | GATAGGTGGTGGTTGTGTTT+TGG | + | chr2_2:51200563-51200582 | Msa0256440:intron | 45.0% |
| ! | AGAGTGCCTCCAAGTAGAAT+TGG | - | chr2_2:51200673-51200692 | None:intergenic | 45.0% |
| ATGAGATCGGGAAGAAGAAC+GGG | - | chr2_2:51198659-51198678 | Msa0256430:intron | 45.0% | |
| TCTTCTTCCCGATCTCATTG+TGG | + | chr2_2:51198661-51198680 | Msa0256440:CDS | 45.0% | |
| ! | AATCTCACGACGGGTTTCAA+CGG | - | chr2_2:51198704-51198723 | Msa0256430:intron | 45.0% |
| GACCAGGTAAACCTTGGATT+CGG | + | chr2_2:51199119-51199138 | Msa0256440:CDS | 45.0% | |
| AGCTTCGCTATATAGCACTG+TGG | + | chr2_2:51199364-51199383 | Msa0256440:intron | 45.0% | |
| CACTGTGGCATAGCAGAATT+TGG | + | chr2_2:51199379-51199398 | Msa0256440:intron | 45.0% | |
| AGACTTATGAGGAGGAAGAC+CGG | + | chr2_2:51199446-51199465 | Msa0256440:intron | 45.0% | |
| GATGTACAAGTCCAACACCA+AGG | - | chr2_2:51200359-51200378 | None:intergenic | 45.0% | |
| AACACAACCACCACCTATCA+TGG | - | chr2_2:51200562-51200581 | None:intergenic | 45.0% | |
| !! | GATAGGTGGTGGTTGTGTTT+TGG | + | chr2_2:51200563-51200582 | Msa0256440:intron | 45.0% |
| ! | AGAGTGCCTCCAAGTAGAAT+TGG | - | chr2_2:51200673-51200692 | None:intergenic | 45.0% |
| CGTAAGGTAAGTAGGGTGTG+TGG | - | chr2_2:51198809-51198828 | Msa0256430:intron | 50.0% | |
| TTGGGTCGTAGCTCCATACA+TGG | + | chr2_2:51198856-51198875 | Msa0256440:CDS | 50.0% | |
| TCCAGCTTTACGTCCTTAGG+AGG | - | chr2_2:51199101-51199120 | None:intergenic | 50.0% | |
| TGGTCCAGCTTTACGTCCTT+AGG | - | chr2_2:51199104-51199123 | None:intergenic | 50.0% | |
| TAAGGACGTAAAGCTGGACC+AGG | + | chr2_2:51199103-51199122 | Msa0256440:CDS | 50.0% | |
| AAGCTGGACCAGGTAAACCT+TGG | + | chr2_2:51199113-51199132 | Msa0256440:CDS | 50.0% | |
| AGCCGAATCCAAGGTTTACC+TGG | - | chr2_2:51199124-51199143 | None:intergenic | 50.0% | |
| AGGGAACAAAAGAGAGAGGG+AGG | + | chr2_2:51199910-51199929 | Msa0256440:intron | 50.0% | |
| GAGGGCAGAGTTCATTGCAT+GGG | + | chr2_2:51200607-51200626 | Msa0256440:CDS | 50.0% | |
| CGTAAGGTAAGTAGGGTGTG+TGG | - | chr2_2:51198809-51198828 | Msa0256430:intron | 50.0% | |
| TTGGGTCGTAGCTCCATACA+TGG | + | chr2_2:51198856-51198875 | Msa0256440:CDS | 50.0% | |
| TCCAGCTTTACGTCCTTAGG+AGG | - | chr2_2:51199101-51199120 | None:intergenic | 50.0% | |
| TGGTCCAGCTTTACGTCCTT+AGG | - | chr2_2:51199104-51199123 | None:intergenic | 50.0% | |
| TAAGGACGTAAAGCTGGACC+AGG | + | chr2_2:51199103-51199122 | Msa0256440:CDS | 50.0% | |
| AAGCTGGACCAGGTAAACCT+TGG | + | chr2_2:51199113-51199132 | Msa0256440:CDS | 50.0% | |
| AGCCGAATCCAAGGTTTACC+TGG | - | chr2_2:51199124-51199143 | None:intergenic | 50.0% | |
| AGGGAACAAAAGAGAGAGGG+AGG | + | chr2_2:51199910-51199929 | Msa0256440:intron | 50.0% | |
| GAGGGCAGAGTTCATTGCAT+GGG | + | chr2_2:51200607-51200626 | Msa0256440:CDS | 50.0% | |
| GCCTCCTAAGGACGTAAAGC+TGG | + | chr2_2:51199097-51199116 | Msa0256440:CDS | 55.0% | |
| GGAGGGCAGAGTTCATTGCA+TGG | + | chr2_2:51200606-51200625 | Msa0256440:CDS | 55.0% | |
| !! | CTACTTGGAGGCACTCTCGT+TGG | + | chr2_2:51200676-51200695 | Msa0256440:CDS | 55.0% |
| GCCTCCTAAGGACGTAAAGC+TGG | + | chr2_2:51199097-51199116 | Msa0256440:CDS | 55.0% | |
| GGAGGGCAGAGTTCATTGCA+TGG | + | chr2_2:51200606-51200625 | Msa0256440:CDS | 55.0% | |
| !! | CTACTTGGAGGCACTCTCGT+TGG | + | chr2_2:51200676-51200695 | Msa0256440:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 51198647 | 51200711 | 51198647 | ID=Msa0256440;Name=Msa0256440 |
| chr2_2 | mRNA | 51198647 | 51200711 | 51198647 | ID=Msa0256440-mRNA-1;Parent=Msa0256440;Name=Msa0256440-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0|0|1|0.5|0.33|3|0|168 |
| chr2_2 | exon | 51198647 | 51198877 | 51198647 | ID=Msa0256440-mRNA-1:exon:15448;Parent=Msa0256440-mRNA-1 |
| chr2_2 | exon | 51199041 | 51199169 | 51199041 | ID=Msa0256440-mRNA-1:exon:15449;Parent=Msa0256440-mRNA-1 |
| chr2_2 | exon | 51200568 | 51200711 | 51200568 | ID=Msa0256440-mRNA-1:exon:15450;Parent=Msa0256440-mRNA-1 |
| chr2_2 | CDS | 51198647 | 51198877 | 51198647 | ID=Msa0256440-mRNA-1:cds;Parent=Msa0256440-mRNA-1 |
| chr2_2 | CDS | 51199041 | 51199169 | 51199041 | ID=Msa0256440-mRNA-1:cds;Parent=Msa0256440-mRNA-1 |
| chr2_2 | CDS | 51200568 | 51200711 | 51200568 | ID=Msa0256440-mRNA-1:cds;Parent=Msa0256440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
