Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0482620 | KEH23668.1 | 70.213 | 141 | 16 | 2 | 179 | 317 | 61 | 177 | 2.03e-52 | 190 |
| Msa0482620 | KEH23668.1 | 87.129 | 101 | 13 | 0 | 1 | 101 | 1 | 101 | 4.11e-49 | 181 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0482620 | sp|P44797|PUR8_HAEIN | 44.755 | 143 | 54 | 2 | 179 | 321 | 4 | 121 | 6.79e-26 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0482620 | A0A072U3D8 | 70.213 | 141 | 16 | 2 | 179 | 317 | 61 | 177 | 9.69e-53 | 190 |
| Msa0482620 | A0A072U3D8 | 87.129 | 101 | 13 | 0 | 1 | 101 | 1 | 101 | 1.96e-49 | 181 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0142220 | Msa0482620 | 0.800071 | 1.711719e-48 | -8.615850e-47 |
| Msa0145750 | Msa0482620 | 0.803195 | 3.914314e-49 | -8.615850e-47 |
| Msa0153910 | Msa0482620 | 0.843724 | 1.174794e-58 | -8.615850e-47 |
| Msa0199240 | Msa0482620 | 0.803169 | 3.962749e-49 | -8.615850e-47 |
| Msa0232850 | Msa0482620 | 0.802420 | 5.658525e-49 | -8.615850e-47 |
| Msa0366580 | Msa0482620 | 0.801446 | 8.968151e-49 | -8.615850e-47 |
| Msa0384800 | Msa0482620 | 0.804936 | 1.700608e-49 | -8.615850e-47 |
| Msa0406120 | Msa0482620 | 0.804595 | 2.003184e-49 | -8.615850e-47 |
| Msa0414420 | Msa0482620 | 0.806451 | 8.173378e-50 | -8.615850e-47 |
| Msa0452620 | Msa0482620 | 0.802064 | 6.697787e-49 | -8.615850e-47 |
| Msa0452900 | Msa0482620 | 0.824493 | 7.836119e-54 | -8.615850e-47 |
| Msa0456200 | Msa0482620 | 0.820771 | 5.750399e-53 | -8.615850e-47 |
| Msa0482620 | Msa0564890 | 0.810024 | 1.415500e-50 | -8.615850e-47 |
| Msa0482620 | Msa0604350 | 0.805837 | 1.100812e-49 | -8.615850e-47 |
| Msa0482620 | Msa0627410 | 0.818422 | 1.976451e-52 | -8.615850e-47 |
| Msa0482620 | Msa0636170 | 0.827664 | 1.380801e-54 | -8.615850e-47 |
| Msa0482620 | Msa0678930 | 0.827786 | 1.290733e-54 | -8.615850e-47 |
| Msa0482620 | Msa0726140 | 0.835676 | 1.460788e-56 | -8.615850e-47 |
| Msa0482620 | Msa0733290 | 0.808851 | 2.528231e-50 | -8.615850e-47 |
| Msa0482620 | Msa0743810 | 0.812340 | 4.453790e-51 | -8.615850e-47 |
| Msa0482620 | Msa0745060 | 0.839191 | 1.836612e-57 | -8.615850e-47 |
| Msa0482620 | Msa0783160 | 0.801276 | 9.720170e-49 | -8.615850e-47 |
| Msa0482620 | Msa0804210 | 0.900742 | 5.403767e-78 | -8.615850e-47 |
| Msa0482620 | Msa0825860 | 0.847318 | 1.247856e-59 | -8.615850e-47 |
| Msa0482620 | Msa0846330 | 0.845697 | 3.455215e-59 | -8.615850e-47 |
| Msa0482620 | Msa0846350 | 0.830631 | 2.634014e-55 | -8.615850e-47 |
| Msa0482620 | Msa0865320 | 0.827535 | 1.482484e-54 | -8.615850e-47 |
| Msa0482620 | Msa0885280 | 0.807055 | 6.094398e-50 | -8.615850e-47 |
| Msa0482620 | Msa0885290 | 0.842164 | 3.056645e-58 | -8.615850e-47 |
| Msa0482620 | Msa0954910 | 0.805813 | 1.113864e-49 | -8.615850e-47 |
| Msa0482620 | Msa0969260 | 0.808919 | 2.444407e-50 | -8.615850e-47 |
| Msa0482620 | Msa1016280 | 0.810133 | 1.341402e-50 | -8.615850e-47 |
| Msa0482620 | Msa1024240 | 0.830951 | 2.198462e-55 | -8.615850e-47 |
| Msa0482620 | Msa1025360 | 0.817375 | 3.407328e-52 | -8.615850e-47 |
| Msa0482620 | Msa1025370 | 0.829399 | 5.260740e-55 | -8.615850e-47 |
| Msa0482620 | Msa1044830 | 0.826007 | 3.436017e-54 | -8.615850e-47 |
| Msa0482620 | Msa1044840 | 0.814029 | 1.896668e-51 | -8.615850e-47 |
| Msa0482620 | Msa1077870 | 0.811984 | 5.325188e-51 | -8.615850e-47 |
| Msa0482620 | Msa1092990 | 0.826668 | 2.390317e-54 | -8.615850e-47 |
| Msa0482620 | Msa1100980 | 0.808304 | 3.308177e-50 | -8.615850e-47 |
| Msa0482620 | Msa1123420 | 0.801515 | 8.684627e-49 | -8.615850e-47 |
| Msa0482620 | Msa1136090 | 0.845789 | 3.262074e-59 | -8.615850e-47 |
| Msa0482620 | Msa1146110 | 0.831381 | 1.724007e-55 | -8.615850e-47 |
| Msa0482620 | Msa1160670 | 0.802049 | 6.746213e-49 | -8.615850e-47 |
| Msa0482620 | Msa1160690 | 0.825202 | 5.330439e-54 | -8.615850e-47 |
| Msa0482620 | Msa1173920 | 0.806336 | 8.643805e-50 | -8.615850e-47 |
| Msa0482620 | Msa1178720 | 0.821076 | 4.894045e-53 | -8.615850e-47 |
| Msa0482620 | Msa1187940 | 0.834995 | 2.170804e-56 | -8.615850e-47 |
| Msa0482620 | Msa1187950 | 0.816944 | 4.257946e-52 | -8.615850e-47 |
| Msa0482620 | Msa1192640 | 0.805058 | 1.603674e-49 | -8.615850e-47 |
| Msa0482620 | Msa1260100 | 0.805414 | 1.350356e-49 | -8.615850e-47 |
| Msa0482620 | Msa1269670 | 0.824725 | 6.908453e-54 | -8.615850e-47 |
| Msa0482620 | Msa1270230 | 0.803979 | 2.691502e-49 | -8.615850e-47 |
| Msa0482620 | Msa1270240 | 0.800422 | 1.452144e-48 | -8.615850e-47 |
| Msa0482620 | Msa1270270 | 0.820184 | 7.841483e-53 | -8.615850e-47 |
| Msa0482620 | Msa1283330 | 0.805628 | 1.217736e-49 | -8.615850e-47 |
| Msa0482620 | Msa1285930 | 0.825364 | 4.879327e-54 | -8.615850e-47 |
| Msa0482620 | Msa1287810 | 0.816540 | 5.245652e-52 | -8.615850e-47 |
| Msa0482620 | Msa1289430 | 0.803780 | 2.960251e-49 | -8.615850e-47 |
| Msa0482620 | Msa1297210 | 0.840605 | 7.861685e-58 | -8.615850e-47 |
| Msa0482620 | Msa1307890 | 0.802695 | 4.966490e-49 | -8.615850e-47 |
| Msa0482620 | Msa1340590 | 0.805609 | 1.228855e-49 | -8.615850e-47 |
| Msa0482620 | Msa1404000 | 0.811964 | 5.379242e-51 | -8.615850e-47 |
| Msa0482620 | Msa1415310 | 0.821774 | 3.376077e-53 | -8.615850e-47 |
| Msa0482620 | Msa1433120 | 0.807748 | 4.343181e-50 | -8.615850e-47 |
| Msa0482620 | Msa1438250 | 0.802250 | 6.133937e-49 | -8.615850e-47 |
| Msa0256440 | Msa0482620 | 0.806953 | 6.403612e-50 | -8.615850e-47 |
| Msa0267000 | Msa0482620 | 0.816846 | 4.480493e-52 | -8.615850e-47 |
| Msa0267010 | Msa0482620 | 0.806714 | 7.194711e-50 | -8.615850e-47 |
| Msa0326200 | Msa0482620 | 0.821554 | 3.796131e-53 | -8.615850e-47 |
| Msa0342240 | Msa0482620 | 0.814432 | 1.545008e-51 | -8.615850e-47 |
| Msa0353190 | Msa0482620 | 0.819490 | 1.130111e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0482620 | MtrunA17_Chr7g0258371 | 70.213 | 141 | 16 | 2 | 179 | 317 | 61 | 177 | 5.09e-56 | 190 |
| Msa0482620 | MtrunA17_Chr7g0258371 | 87.129 | 101 | 13 | 0 | 1 | 101 | 1 | 101 | 1.01e-52 | 181 |
| Msa0482620 | MtrunA17_Chr5g0436391 | 90.476 | 84 | 8 | 0 | 1 | 84 | 1 | 84 | 2.79e-46 | 151 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0482620 | AT4G18440.1 | 52.482 | 141 | 41 | 2 | 179 | 317 | 77 | 193 | 1.37e-35 | 135 |
| Msa0482620 | AT1G36280.2 | 48.936 | 141 | 46 | 2 | 179 | 317 | 68 | 184 | 2.90e-34 | 131 |
| Msa0482620 | AT1G36280.2 | 49.438 | 89 | 43 | 1 | 13 | 101 | 22 | 108 | 9.63e-15 | 75.1 |
| Msa0482620 | AT1G36280.1 | 48.936 | 141 | 46 | 2 | 179 | 317 | 68 | 184 | 3.20e-34 | 131 |
| Msa0482620 | AT1G36280.1 | 49.438 | 89 | 43 | 1 | 13 | 101 | 22 | 108 | 9.47e-15 | 75.1 |
Find 76 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGATTGAAGGTTCGAATT+TGG | 0.197636 | 3_3:+89806801 | None:intergenic |
| GTTTATGTTGTTAGATTAAA+TGG | 0.221608 | 3_3:-89805783 | Msa0482620:intron |
| AATATGGTCTCAATTACTTT+AGG | 0.247950 | 3_3:-89806567 | Msa0482620:CDS |
| AATATGGTCACAATTACTTT+AGG | 0.255957 | 3_3:-89807790 | Msa0482620:CDS |
| GGTGGTGGCGATGAGGGATT+TGG | 0.301052 | 3_3:+89807931 | None:intergenic |
| GCTCCTTTCATGGGTGAATA+TGG | 0.303422 | 3_3:-89806583 | Msa0482620:CDS |
| GGTGGTGGCGATGAGGGATT+TGG | 0.318629 | 3_3:+89806706 | None:intergenic |
| ATATGGTCTCAATTACTTTA+GGG | 0.318736 | 3_3:-89806566 | Msa0482620:CDS |
| GCTCCTTTCATGAGTGAATA+TGG | 0.343012 | 3_3:-89807806 | Msa0482620:CDS |
| ATATGGTCACAATTACTTTA+GGG | 0.349750 | 3_3:-89807789 | Msa0482620:CDS |
| TAAGTCTTTCTTACAAGGTT+TGG | 0.352142 | 3_3:-89805701 | Msa0482620:CDS |
| GAGAAGGAAAGAGGGGAAGA+AGG | 0.366492 | 3_3:+89807974 | None:intergenic |
| GAAAGAGGGGAAGAAGGAAA+AGG | 0.381446 | 3_3:+89807980 | None:intergenic |
| AAAATGGTACTTTAAGCAAA+AGG | 0.397214 | 3_3:+89806497 | None:intergenic |
| TCAAGAATTAGCTCCTTTCA+TGG | 0.400663 | 3_3:-89806593 | Msa0482620:CDS |
| GGGATTGGTGGTGGCGATGA+GGG | 0.403663 | 3_3:+89807925 | None:intergenic |
| TGAGGATAACGACCGTCTAA+TGG | 0.411832 | 3_3:+89807845 | None:intergenic |
| AGGGAAAAGAGAAGGAAAGA+GGG | 0.413616 | 3_3:+89807966 | None:intergenic |
| TTGAGGGTTGAGGAGATTGA+AGG | 0.418718 | 3_3:+89806790 | None:intergenic |
| TTGAGGGTTGAGGAGATTGA+AGG | 0.418718 | 3_3:+89808015 | None:intergenic |
| AAAGAGGGGAAGAAGGAAAA+GGG | 0.423992 | 3_3:+89807981 | None:intergenic |
| GAGAAGGAAAGATGGGAAGA+AGG | 0.428213 | 3_3:+89806749 | None:intergenic |
| CAAGGTTTGGTCGATGACTT+TGG | 0.429560 | 3_3:-89805688 | Msa0482620:CDS |
| GGTATTGGTGGTGGCGATGA+GGG | 0.440948 | 3_3:+89806700 | None:intergenic |
| GGGAAAAGAGAAGGAAAGAT+GGG | 0.442907 | 3_3:+89806742 | None:intergenic |
| AGGGAAAAGAGAAGGAAAGA+TGG | 0.447702 | 3_3:+89806741 | None:intergenic |
| TCGGAACATGTTGGGATTGG+TGG | 0.450795 | 3_3:+89807913 | None:intergenic |
| AGCTCGGAGCATGTTGGTAT+TGG | 0.456019 | 3_3:+89806685 | None:intergenic |
| GAAAGATGGGAAGAAGGAAA+AGG | 0.468185 | 3_3:+89806755 | None:intergenic |
| GAATGAGCTCGGAACATGTT+GGG | 0.471951 | 3_3:+89807905 | None:intergenic |
| GATACTAAGTCTTTCTTACA+AGG | 0.480203 | 3_3:-89805706 | Msa0482620:CDS |
| AAAGATGGGAAGAAGGAAAA+GGG | 0.491078 | 3_3:+89806756 | None:intergenic |
| GAGGGAAAAGAGAAGGAAAG+AGG | 0.495235 | 3_3:+89807965 | None:intergenic |
| CTTTGGTGAAGATGATGTTA+AGG | 0.496123 | 3_3:-89805671 | Msa0482620:CDS |
| AACATGTTCCGAGCTCATTC+CGG | 0.503730 | 3_3:-89807902 | Msa0482620:CDS |
| GGGAAAAGAGAAGGAAAGAG+GGG | 0.505609 | 3_3:+89807967 | None:intergenic |
| AAATGGTACTTTAAGCAAAA+GGG | 0.511374 | 3_3:+89806498 | None:intergenic |
| TGGAGATAAAGCTGTTAAAG+TGG | 0.515753 | 3_3:+89807865 | None:intergenic |
| TCGGAGCATGTTGGTATTGG+TGG | 0.520054 | 3_3:+89806688 | None:intergenic |
| CACAAAGTGAAACGCAACCT+TGG | 0.522692 | 3_3:+89805558 | None:intergenic |
| CAAGAATTAGCTCCTTTCAT+GGG | 0.527832 | 3_3:-89806592 | Msa0482620:CDS |
| GGTGGCGATGAGGGATTTGG+AGG | 0.530534 | 3_3:+89806709 | None:intergenic |
| GGTGGCGATGAGGGATTTGG+AGG | 0.530534 | 3_3:+89807934 | None:intergenic |
| TGGTATTGGTGGTGGCGATG+AGG | 0.536480 | 3_3:+89806699 | None:intergenic |
| TGGGATTGGTGGTGGCGATG+AGG | 0.538980 | 3_3:+89807924 | None:intergenic |
| ATTGAAGGTTCGAATTTGGA+TGG | 0.541085 | 3_3:+89806805 | None:intergenic |
| GATTTGGAGGTGAAGTGAGA+GGG | 0.543534 | 3_3:+89806722 | None:intergenic |
| GATTTGGAGGTGAAGTGAGA+GGG | 0.543534 | 3_3:+89807947 | None:intergenic |
| CAAAGTCACCGGAGTAAGCT+CGG | 0.545918 | 3_3:+89806669 | None:intergenic |
| AAAGTAGAGTTCAAAGTCAC+CGG | 0.546122 | 3_3:+89806658 | None:intergenic |
| GGATTTGGAGGTGAAGTGAG+AGG | 0.547495 | 3_3:+89806721 | None:intergenic |
| GGATTTGGAGGTGAAGTGAG+AGG | 0.547495 | 3_3:+89807946 | None:intergenic |
| TTACTTTAGGGTCATTGTTG+AGG | 0.550140 | 3_3:-89806554 | Msa0482620:CDS |
| GAACATGTTGGGATTGGTGG+TGG | 0.550829 | 3_3:+89807916 | None:intergenic |
| TTAGTATCTTCACTAAAAGC+AGG | 0.553135 | 3_3:+89805721 | None:intergenic |
| GAATCATGATGTTAAAGTTG+TGG | 0.553562 | 3_3:-89805623 | Msa0482620:CDS |
| CAAAGTCGCCGGAATGAGCT+CGG | 0.557625 | 3_3:+89807894 | None:intergenic |
| GAAGAAGGAAAAGGGTGTGT+TGG | 0.559789 | 3_3:+89806764 | None:intergenic |
| GAAGAAGGAAAAGGGTGTGT+TGG | 0.561076 | 3_3:+89807989 | None:intergenic |
| TTACTTTAGGGTCATTGTTG+AGG | 0.562558 | 3_3:-89807777 | Msa0482620:CDS |
| AGCTCGGAACATGTTGGGAT+TGG | 0.562954 | 3_3:+89807910 | None:intergenic |
| AGTGGAGAGTTCAAAGTCGC+CGG | 0.567462 | 3_3:+89807883 | None:intergenic |
| GAAGTGAGAGGGAAAAGAGA+AGG | 0.569318 | 3_3:+89806733 | None:intergenic |
| GAAGTGAGAGGGAAAAGAGA+AGG | 0.569318 | 3_3:+89807958 | None:intergenic |
| AACATGCTCCGAGCTTACTC+CGG | 0.588128 | 3_3:-89806677 | Msa0482620:CDS |
| ACAGCTTTATCTCCATTAGA+CGG | 0.589374 | 3_3:-89807857 | Msa0482620:CDS |
| ATTGAAGGTTCGAATTTGAG+TGG | 0.590609 | 3_3:+89808030 | None:intergenic |
| AGACCATATTCACCCATGAA+AGG | 0.593937 | 3_3:+89806580 | None:intergenic |
| GAGCATGTTGGTATTGGTGG+TGG | 0.594668 | 3_3:+89806691 | None:intergenic |
| ATCAAATGCTGAAATTGCCA+AGG | 0.596250 | 3_3:-89805575 | Msa0482620:CDS |
| GAACTTCAAAACCTCACTCA+TGG | 0.596328 | 3_3:-89806840 | Msa0482620:CDS |
| TGACCATATTCACTCATGAA+AGG | 0.608643 | 3_3:+89807803 | None:intergenic |
| GGAATGAGCTCGGAACATGT+TGG | 0.622043 | 3_3:+89807904 | None:intergenic |
| GGAGTAAGCTCGGAGCATGT+TGG | 0.624220 | 3_3:+89806679 | None:intergenic |
| GTTAGAGAGTGCCATGAGTG+AGG | 0.659116 | 3_3:+89806829 | None:intergenic |
| TGAAATTAGTGAAATCACTG+AGG | 0.689537 | 3_3:-89805746 | Msa0482620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAGGAAAAAACTATA+GGG | + | chr3_3:89805950-89805969 | None:intergenic | 15.0% |
| !! | AAAAATTAGGAAAAAACTAT+AGG | + | chr3_3:89805951-89805970 | None:intergenic | 15.0% |
| !! | TTATGTTATTATGTATATGT+AGG | - | chr3_3:89806017-89806036 | Msa0482620:intron | 15.0% |
| !! | AATATTAATTGAGTGAATTA+GGG | - | chr3_3:89806354-89806373 | Msa0482620:intron | 15.0% |
| !! | TTATGTTGTTATAGATTAAA+TGG | - | chr3_3:89806538-89806557 | Msa0482620:CDS | 15.0% |
| !! | AAAGATGAGAAAATAAAAAA+AGG | + | chr3_3:89807059-89807078 | None:intergenic | 15.0% |
| !! | AAAAATTAGAAAAATCTACA+GGG | + | chr3_3:89807176-89807195 | None:intergenic | 15.0% |
| !! | AAAAAATTAGAAAAATCTAC+AGG | + | chr3_3:89807177-89807196 | None:intergenic | 15.0% |
| !! | CACAAACATAACAATAAAAA+GGG | + | chr3_3:89805887-89805906 | None:intergenic | 20.0% |
| !! | ACACAAACATAACAATAAAA+AGG | + | chr3_3:89805888-89805907 | None:intergenic | 20.0% |
| !! | GTTATGTTTGTGTTTATATA+TGG | - | chr3_3:89806148-89806167 | Msa0482620:intron | 20.0% |
| !! | ACCGAAGAAAAATAAATAAT+GGG | + | chr3_3:89806206-89806225 | None:intergenic | 20.0% |
| !! | AACCGAAGAAAAATAAATAA+TGG | + | chr3_3:89806207-89806226 | None:intergenic | 20.0% |
| !!! | TATTTATTTTTCTTCGGTTT+TGG | - | chr3_3:89806208-89806227 | Msa0482620:intron | 20.0% |
| !! | GAATATTAATTGAGTGAATT+AGG | - | chr3_3:89806353-89806372 | Msa0482620:intron | 20.0% |
| !! | TATATATAGACACATAAATG+TGG | + | chr3_3:89806440-89806459 | None:intergenic | 20.0% |
| !! | AATTCAAAATCTGTTGAATA+TGG | + | chr3_3:89806465-89806484 | None:intergenic | 20.0% |
| !! | AAAAGAGTTCTTTAAACAAA+CGG | + | chr3_3:89806489-89806508 | None:intergenic | 20.0% |
| !! | TATACTTCAAGAACTATTAA+GGG | + | chr3_3:89806705-89806724 | None:intergenic | 20.0% |
| !! | ACTCAATTACTATAGTATAT+AGG | - | chr3_3:89807135-89807154 | Msa0482620:intron | 20.0% |
| !! | CTCAATTACTATAGTATATA+GGG | - | chr3_3:89807136-89807155 | Msa0482620:intron | 20.0% |
| !!! | CATTAGAAGCATAATAAAAA+GGG | + | chr3_3:89807338-89807357 | None:intergenic | 20.0% |
| !!! | ACATTAGAAGCATAATAAAA+AGG | + | chr3_3:89807339-89807358 | None:intergenic | 20.0% |
| !! | GTTATGTATGTGTTTATTTA+TGG | - | chr3_3:89807357-89807376 | Msa0482620:intron | 20.0% |
| !! | TTTATGGACTTAATTACTAT+AGG | - | chr3_3:89807373-89807392 | Msa0482620:intron | 20.0% |
| !! | TTATGGACTTAATTACTATA+GGG | - | chr3_3:89807374-89807393 | Msa0482620:intron | 20.0% |
| !! | ACCGAAGAAAAATAAATAAT+GGG | + | chr3_3:89806206-89806225 | None:intergenic | 20.0% |
| !! | AACCGAAGAAAAATAAATAA+TGG | + | chr3_3:89806207-89806226 | None:intergenic | 20.0% |
| !! | ATAATACTGTATATATGACT+TGG | + | chr3_3:89807603-89807622 | None:intergenic | 20.0% |
| !! | AAAAGAGTTCTTTAAACAAA+CGG | + | chr3_3:89806489-89806508 | None:intergenic | 20.0% |
| !! | GTTTATGTTGTTAGATTAAA+TGG | - | chr3_3:89807800-89807819 | Msa0482620:CDS | 20.0% |
| ! | AATATGGTCACAATTACTTT+AGG | - | chr3_3:89805793-89805812 | Msa0482620:intron | 25.0% |
| ! | ATATGGTCACAATTACTTTA+GGG | - | chr3_3:89805794-89805813 | Msa0482620:intron | 25.0% |
| ! | TGTATGAACTCAATTACTAT+AGG | - | chr3_3:89805909-89805928 | Msa0482620:intron | 25.0% |
| ! | GTATGAACTCAATTACTATA+GGG | - | chr3_3:89805910-89805929 | Msa0482620:intron | 25.0% |
| !!! | CAAAAGGGTATCAAAAAATT+AGG | + | chr3_3:89805964-89805983 | None:intergenic | 25.0% |
| ! | AAACAACTCTTTAAGCAAAA+GGG | + | chr3_3:89805979-89805998 | None:intergenic | 25.0% |
| ! | AAAACAACTCTTTAAGCAAA+AGG | + | chr3_3:89805980-89805999 | None:intergenic | 25.0% |
| ! | AAAATCGAAGAACAAACAAT+GGG | + | chr3_3:89806083-89806102 | None:intergenic | 25.0% |
| ! | AAAAATCGAAGAACAAACAA+TGG | + | chr3_3:89806084-89806103 | None:intergenic | 25.0% |
| ! | AAAGAGTTCTTTAAGCAAAA+TGG | + | chr3_3:89806113-89806132 | None:intergenic | 25.0% |
| ! | TATATGGACTCAATTACTAT+AGG | - | chr3_3:89806164-89806183 | Msa0482620:intron | 25.0% |
| ! | ATATGGACTCAATTACTATA+GGG | - | chr3_3:89806165-89806184 | Msa0482620:intron | 25.0% |
| ! | CCGAAGAAAAATAAATAATG+GGG | + | chr3_3:89806205-89806224 | None:intergenic | 25.0% |
| !!! | CCCCATTATTTATTTTTCTT+CGG | - | chr3_3:89806202-89806221 | Msa0482620:intron | 25.0% |
| ! | ATAACATAAATCGCAAACAA+TGG | - | chr3_3:89806259-89806278 | Msa0482620:intron | 25.0% |
| ! | TAGCCATATATACAGTATTA+CGG | - | chr3_3:89806390-89806409 | Msa0482620:intron | 25.0% |
| ! | AAAGAGTTCTTTAAACAAAC+GGG | + | chr3_3:89806488-89806507 | None:intergenic | 25.0% |
| ! | CGTTATTAAGGGAAATAAAT+TGG | + | chr3_3:89806592-89806611 | None:intergenic | 25.0% |
| ! | CTATACTTCAAGAACTATTA+AGG | + | chr3_3:89806706-89806725 | None:intergenic | 25.0% |
| ! | AATATGGTCTCAATTACTTT+AGG | - | chr3_3:89807016-89807035 | Msa0482620:intron | 25.0% |
| ! | ATATGGTCTCAATTACTTTA+GGG | - | chr3_3:89807017-89807036 | Msa0482620:intron | 25.0% |
| ! | AAATGGTACTTTAAGCAAAA+GGG | + | chr3_3:89807088-89807107 | None:intergenic | 25.0% |
| ! | AAAATGGTACTTTAAGCAAA+AGG | + | chr3_3:89807089-89807108 | None:intergenic | 25.0% |
| ! | ACAGACATAACAACAAAAAA+TGG | + | chr3_3:89807105-89807124 | None:intergenic | 25.0% |
| ! | AAAACAGTTCTTAAGCAAAA+GGG | + | chr3_3:89807205-89807224 | None:intergenic | 25.0% |
| ! | AAAAACAGTTCTTAAGCAAA+AGG | + | chr3_3:89807206-89807225 | None:intergenic | 25.0% |
| ! | GTTATGTTTGTGTTCATATA+TGG | - | chr3_3:89807242-89807261 | Msa0482620:intron | 25.0% |
| ! | TATATGGAGTGAATTACTAT+AGG | - | chr3_3:89807258-89807277 | Msa0482620:intron | 25.0% |
| ! | ATATGGAGTGAATTACTATA+GGG | - | chr3_3:89807259-89807278 | Msa0482620:intron | 25.0% |
| ! | AAAATCGAAGAACAAACAAT+GGG | + | chr3_3:89806083-89806102 | None:intergenic | 25.0% |
| ! | AAAAATCGAAGAACAAACAA+TGG | + | chr3_3:89806084-89806103 | None:intergenic | 25.0% |
| ! | CCGAAGAAAAATAAATAATG+GGG | + | chr3_3:89806205-89806224 | None:intergenic | 25.0% |
| !!! | CCCCATTATTTATTTTTCTT+CGG | - | chr3_3:89806202-89806221 | Msa0482620:intron | 25.0% |
| ! | ATAACATAAATCGCAAACAA+TGG | - | chr3_3:89806259-89806278 | Msa0482620:intron | 25.0% |
| !!! | AATATTACTTGAGTGGATTA+GGG | - | chr3_3:89807566-89807585 | Msa0482620:intron | 25.0% |
| ! | TATCCAAAATCTGTTGAATA+TGG | + | chr3_3:89807728-89807747 | None:intergenic | 25.0% |
| !!! | AGGAGATTAAATTTTTTGAG+AGG | - | chr3_3:89807932-89807951 | Msa0482620:CDS | 25.0% |
| ! | GCTAATTCTTGAACTTTTTG+AGG | + | chr3_3:89805759-89805778 | None:intergenic | 30.0% |
| !! | AAAGGGTACTTTAGACAAAA+GGG | + | chr3_3:89805870-89805889 | None:intergenic | 30.0% |
| !! | AAAAGGGTACTTTAGACAAA+AGG | + | chr3_3:89805871-89805890 | None:intergenic | 30.0% |
| TTCATGTATGAGTGTGTTTA+GGG | - | chr3_3:89806042-89806061 | Msa0482620:intron | 30.0% | |
| AAATCGAAGAACAAACAATG+GGG | + | chr3_3:89806082-89806101 | None:intergenic | 30.0% | |
| GATCGTTTGTTTATCCAATT+CGG | - | chr3_3:89806287-89806306 | Msa0482620:intron | 30.0% | |
| AGAAGACGAAACGTTATTAA+GGG | + | chr3_3:89806603-89806622 | None:intergenic | 30.0% | |
| ! | CAATGAAAGGAAAGGTATAT+GGG | + | chr3_3:89806653-89806672 | None:intergenic | 30.0% |
| ! | ACAATGAAAGGAAAGGTATA+TGG | + | chr3_3:89806654-89806673 | None:intergenic | 30.0% |
| ! | CTTGAACTTTTTGACGATAA+CGG | + | chr3_3:89806975-89806994 | None:intergenic | 30.0% |
| AAATCGAAGAACAAACAATG+GGG | + | chr3_3:89806082-89806101 | None:intergenic | 30.0% | |
| GCATAATAAAAAGGGCAAAA+GGG | + | chr3_3:89807330-89807349 | None:intergenic | 30.0% | |
| AGCATAATAAAAAGGGCAAA+AGG | + | chr3_3:89807331-89807350 | None:intergenic | 30.0% | |
| !! | AGTTCTGAATATTACTTGAG+TGG | - | chr3_3:89807559-89807578 | Msa0482620:intron | 30.0% |
| ! | GAATATTACTTGAGTGGATT+AGG | - | chr3_3:89807565-89807584 | Msa0482620:intron | 30.0% |
| ACTAGAACAATATCACTGAA+AGG | - | chr3_3:89807630-89807649 | Msa0482620:intron | 30.0% | |
| TGAAATTAGTGAAATCACTG+AGG | - | chr3_3:89807837-89807856 | Msa0482620:CDS | 30.0% | |
| TTAGTATCTTCACTAAAAGC+AGG | + | chr3_3:89807865-89807884 | None:intergenic | 30.0% | |
| GATACTAAGTCTTTCTTACA+AGG | - | chr3_3:89807877-89807896 | Msa0482620:CDS | 30.0% | |
| TAAGTCTTTCTTACAAGGTT+TGG | - | chr3_3:89807882-89807901 | Msa0482620:CDS | 30.0% | |
| GAATCATGATGTTAAAGTTG+TGG | - | chr3_3:89807960-89807979 | Msa0482620:CDS | 30.0% | |
| ATTGAAGGTTCGAATTTGAG+TGG | + | chr3_3:89805556-89805575 | None:intergenic | 35.0% | |
| TGGAGATAAAGCTGTTAAAG+TGG | + | chr3_3:89805721-89805740 | None:intergenic | 35.0% | |
| ! | ACAGCTTTATCTCCATTAGA+CGG | - | chr3_3:89805726-89805745 | Msa0482620:CDS | 35.0% |
| TGACCATATTCACTCATGAA+AGG | + | chr3_3:89805783-89805802 | None:intergenic | 35.0% | |
| !! | TTACTTTAGGGTCATTGTTG+AGG | - | chr3_3:89805806-89805825 | Msa0482620:intron | 35.0% |
| GTTCATGTATGAGTGTGTTT+AGG | - | chr3_3:89806041-89806060 | Msa0482620:intron | 35.0% | |
| TTACTATAGGGTCATTGTTG+AGG | - | chr3_3:89806177-89806196 | Msa0482620:intron | 35.0% | |
| GGACCGTAATACTGTATATA+TGG | + | chr3_3:89806396-89806415 | None:intergenic | 35.0% | |
| GAGAAGACGAAACGTTATTA+AGG | + | chr3_3:89806604-89806623 | None:intergenic | 35.0% | |
| !!! | ATGAGTGAGGTTTTGAAGTT+CGG | + | chr3_3:89806744-89806763 | None:intergenic | 35.0% |
| ATTGAAGGTTCGAATTTGGA+TGG | + | chr3_3:89806781-89806800 | None:intergenic | 35.0% | |
| AAAGATGGGAAGAAGGAAAA+GGG | + | chr3_3:89806830-89806849 | None:intergenic | 35.0% | |
| AAAGTAGAGTTCAAAGTCAC+CGG | + | chr3_3:89806928-89806947 | None:intergenic | 35.0% | |
| TCAAGAATTAGCTCCTTTCA+TGG | - | chr3_3:89805767-89805786 | Msa0482620:CDS | 35.0% | |
| CAAGAATTAGCTCCTTTCAT+GGG | - | chr3_3:89805768-89805787 | Msa0482620:CDS | 35.0% | |
| !! | TTACTTTAGGGTCATTGTTG+AGG | - | chr3_3:89805806-89805825 | Msa0482620:intron | 35.0% |
| GAATTACTATAGGGTCATTG+TGG | - | chr3_3:89807268-89807287 | Msa0482620:intron | 35.0% | |
| GATCGTTTGTTTACGCAATT+CGG | - | chr3_3:89807499-89807518 | Msa0482620:intron | 35.0% | |
| TCAGTGATATTGTTCTAGTC+TGG | + | chr3_3:89807629-89807648 | None:intergenic | 35.0% | |
| ATATGGCACATACATAGACA+CGG | + | chr3_3:89807711-89807730 | None:intergenic | 35.0% | |
| ! | GTGCCATATTCAACAGATTT+TGG | - | chr3_3:89807722-89807741 | Msa0482620:intron | 35.0% |
| CTTTGGTGAAGATGATGTTA+AGG | - | chr3_3:89807912-89807931 | Msa0482620:CDS | 35.0% | |
| ATCAAATGCTGAAATTGCCA+AGG | - | chr3_3:89808008-89808027 | Msa0482620:CDS | 35.0% | |
| !!! | AAGGGTGTGTTGGTTTTTGA+GGG | + | chr3_3:89805587-89805606 | None:intergenic | 40.0% |
| !!! | AAAGGGTGTGTTGGTTTTTG+AGG | + | chr3_3:89805588-89805607 | None:intergenic | 40.0% |
| AAAGAGGGGAAGAAGGAAAA+GGG | + | chr3_3:89805605-89805624 | None:intergenic | 40.0% | |
| AGGGAAAAGAGAAGGAAAGA+GGG | + | chr3_3:89805620-89805639 | None:intergenic | 40.0% | |
| GCTCCTTTCATGAGTGAATA+TGG | - | chr3_3:89805777-89805796 | Msa0482620:intron | 40.0% | |
| TTACTATAGGGTCATTGCTG+AGG | - | chr3_3:89805922-89805941 | Msa0482620:intron | 40.0% | |
| ! | TGTGTTTAGGGTCATTGTTG+AGG | - | chr3_3:89806054-89806073 | Msa0482620:intron | 40.0% |
| CGAGGGATATTGTTATAGTC+TGG | + | chr3_3:89806417-89806436 | None:intergenic | 40.0% | |
| TAGACACATAAATGTGGCGA+GGG | + | chr3_3:89806434-89806453 | None:intergenic | 40.0% | |
| ATAGACACATAAATGTGGCG+AGG | + | chr3_3:89806435-89806454 | None:intergenic | 40.0% | |
| GTGGACAACAATGAAAGGAA+AGG | + | chr3_3:89806661-89806680 | None:intergenic | 40.0% | |
| AGGGAATCAATCACCACATA+CGG | + | chr3_3:89806686-89806705 | None:intergenic | 40.0% | |
| GAACTTCAAAACCTCACTCA+TGG | - | chr3_3:89806743-89806762 | Msa0482620:CDS | 40.0% | |
| GGAGATTGAAGGTTCGAATT+TGG | + | chr3_3:89805560-89805579 | None:intergenic | 40.0% | |
| !!! | AAGGGTGTGTTGGTTTTTGA+GGG | + | chr3_3:89805587-89805606 | None:intergenic | 40.0% |
| !!! | AAAGGGTGTGTTGGTTTTTG+AGG | + | chr3_3:89805588-89805607 | None:intergenic | 40.0% |
| GAAAGATGGGAAGAAGGAAA+AGG | + | chr3_3:89806831-89806850 | None:intergenic | 40.0% | |
| GGGAAAAGAGAAGGAAAGAT+GGG | + | chr3_3:89806844-89806863 | None:intergenic | 40.0% | |
| AGGGAAAAGAGAAGGAAAGA+TGG | + | chr3_3:89805620-89805639 | None:intergenic | 40.0% | |
| AGACCATATTCACCCATGAA+AGG | + | chr3_3:89807006-89807025 | None:intergenic | 40.0% | |
| AGTATATAGGGTCATTGCTG+AGG | - | chr3_3:89807148-89807167 | Msa0482620:intron | 40.0% | |
| TTACTATAGGGTCATTGTGG+AGG | - | chr3_3:89807271-89807290 | Msa0482620:intron | 40.0% | |
| TTACTATAGGGCCATTGTTG+AGG | - | chr3_3:89807386-89807405 | Msa0482620:intron | 40.0% | |
| ! | ATAATGGGGTACCTCAACAA+TGG | + | chr3_3:89806191-89806210 | None:intergenic | 40.0% |
| TAGTTACTCTATAGTCGCAG+AGG | + | chr3_3:89807538-89807557 | None:intergenic | 40.0% | |
| !! | AATATCACTGAAAGGTACCG+TGG | - | chr3_3:89807638-89807657 | Msa0482620:intron | 40.0% |
| !! | ATATCACTGAAAGGTACCGT+GGG | - | chr3_3:89807639-89807658 | Msa0482620:intron | 40.0% |
| CATACATAGACACGGAAATG+TGG | + | chr3_3:89807703-89807722 | None:intergenic | 40.0% | |
| TTGAGGGTTGAGGAGATTGA+AGG | + | chr3_3:89805571-89805590 | None:intergenic | 45.0% | |
| !!! | GTGTTGGTTTTTGAGGGTTG+AGG | + | chr3_3:89805581-89805600 | None:intergenic | 45.0% |
| ! | GAAGAAGGAAAAGGGTGTGT+TGG | + | chr3_3:89805597-89805616 | None:intergenic | 45.0% |
| GAAAGAGGGGAAGAAGGAAA+AGG | + | chr3_3:89805606-89805625 | None:intergenic | 45.0% | |
| GGGAAAAGAGAAGGAAAGAG+GGG | + | chr3_3:89805619-89805638 | None:intergenic | 45.0% | |
| GAGGGAAAAGAGAAGGAAAG+AGG | + | chr3_3:89805621-89805640 | None:intergenic | 45.0% | |
| GAAGTGAGAGGGAAAAGAGA+AGG | + | chr3_3:89805628-89805647 | None:intergenic | 45.0% | |
| GATTTGGAGGTGAAGTGAGA+GGG | + | chr3_3:89805639-89805658 | None:intergenic | 45.0% | |
| GAATGAGCTCGGAACATGTT+GGG | + | chr3_3:89805681-89805700 | None:intergenic | 45.0% | |
| AACATGTTCCGAGCTCATTC+CGG | - | chr3_3:89805681-89805700 | Msa0482620:CDS | 45.0% | |
| TGAGGATAACGACCGTCTAA+TGG | + | chr3_3:89805741-89805760 | None:intergenic | 45.0% | |
| GTAGGCACAATTGACCGAAT+TGG | + | chr3_3:89806304-89806323 | None:intergenic | 45.0% | |
| TACTCTATAGTCGCAGAGGT+AGG | + | chr3_3:89806322-89806341 | None:intergenic | 45.0% | |
| TAGCTACTCTATAGTCGCAG+AGG | + | chr3_3:89806326-89806345 | None:intergenic | 45.0% | |
| ATTGCTGTAGAGCGGAAGAA+GGG | + | chr3_3:89806626-89806645 | None:intergenic | 45.0% | |
| TTGAGGGTTGAGGAGATTGA+AGG | + | chr3_3:89805571-89805590 | None:intergenic | 45.0% | |
| !!! | GTGTTGGTTTTTGAGGGTTG+AGG | + | chr3_3:89805581-89805600 | None:intergenic | 45.0% |
| ! | GAAGAAGGAAAAGGGTGTGT+TGG | + | chr3_3:89805597-89805616 | None:intergenic | 45.0% |
| GAGAAGGAAAGATGGGAAGA+AGG | + | chr3_3:89806837-89806856 | None:intergenic | 45.0% | |
| GAAGTGAGAGGGAAAAGAGA+AGG | + | chr3_3:89805628-89805647 | None:intergenic | 45.0% | |
| GATTTGGAGGTGAAGTGAGA+GGG | + | chr3_3:89805639-89805658 | None:intergenic | 45.0% | |
| GCTCCTTTCATGGGTGAATA+TGG | - | chr3_3:89807000-89807019 | Msa0482620:intron | 45.0% | |
| TACTCTATAGTCGCAGAGGT+AGG | + | chr3_3:89806322-89806341 | None:intergenic | 45.0% | |
| TAGACACGGAAATGTGGCAA+GGG | + | chr3_3:89807697-89807716 | None:intergenic | 45.0% | |
| ATAGACACGGAAATGTGGCA+AGG | + | chr3_3:89807698-89807717 | None:intergenic | 45.0% | |
| ! | CAAGGTTTGGTCGATGACTT+TGG | - | chr3_3:89807895-89807914 | Msa0482620:CDS | 45.0% |
| CACAAAGTGAAACGCAACCT+TGG | + | chr3_3:89808028-89808047 | None:intergenic | 45.0% | |
| GAGAAGGAAAGAGGGGAAGA+AGG | + | chr3_3:89805612-89805631 | None:intergenic | 50.0% | |
| GGATTTGGAGGTGAAGTGAG+AGG | + | chr3_3:89805640-89805659 | None:intergenic | 50.0% | |
| ! | GAACATGTTGGGATTGGTGG+TGG | + | chr3_3:89805670-89805689 | None:intergenic | 50.0% |
| TCGGAACATGTTGGGATTGG+TGG | + | chr3_3:89805673-89805692 | None:intergenic | 50.0% | |
| AGCTCGGAACATGTTGGGAT+TGG | + | chr3_3:89805676-89805695 | None:intergenic | 50.0% | |
| GGAATGAGCTCGGAACATGT+TGG | + | chr3_3:89805682-89805701 | None:intergenic | 50.0% | |
| AGTGGAGAGTTCAAAGTCGC+CGG | + | chr3_3:89805703-89805722 | None:intergenic | 50.0% | |
| GATTGCTGTAGAGCGGAAGA+AGG | + | chr3_3:89806627-89806646 | None:intergenic | 50.0% | |
| TGGGTGAGATTGCTGTAGAG+CGG | + | chr3_3:89806634-89806653 | None:intergenic | 50.0% | |
| CGGCAGTGGACAACAATGAA+AGG | + | chr3_3:89806666-89806685 | None:intergenic | 50.0% | |
| TTGTTGTCCACTGCCGTATG+TGG | - | chr3_3:89806670-89806689 | Msa0482620:CDS | 50.0% | |
| TCAATCACCACATACGGCAG+TGG | + | chr3_3:89806680-89806699 | None:intergenic | 50.0% | |
| !! | GTTAGAGAGTGCCATGAGTG+AGG | + | chr3_3:89806757-89806776 | None:intergenic | 50.0% |
| GGATTTGGAGGTGAAGTGAG+AGG | + | chr3_3:89805640-89805659 | None:intergenic | 50.0% | |
| !! | GAGCATGTTGGTATTGGTGG+TGG | + | chr3_3:89806895-89806914 | None:intergenic | 50.0% |
| ! | TCGGAGCATGTTGGTATTGG+TGG | + | chr3_3:89806898-89806917 | None:intergenic | 50.0% |
| AGCTCGGAGCATGTTGGTAT+TGG | + | chr3_3:89806901-89806920 | None:intergenic | 50.0% | |
| AACATGCTCCGAGCTTACTC+CGG | - | chr3_3:89806906-89806925 | Msa0482620:intron | 50.0% | |
| CAAAGTCACCGGAGTAAGCT+CGG | + | chr3_3:89806917-89806936 | None:intergenic | 50.0% | |
| TGGCAAGGGTTCTTATCCCA+CGG | + | chr3_3:89807658-89807677 | None:intergenic | 50.0% | |
| AGACACGGAAATGTGGCAAG+GGG | + | chr3_3:89807696-89807715 | None:intergenic | 50.0% | |
| CAAAGTCGCCGGAATGAGCT+CGG | + | chr3_3:89805692-89805711 | None:intergenic | 55.0% | |
| !! | GGTATTGGTGGTGGCGATGA+GGG | + | chr3_3:89806886-89806905 | None:intergenic | 55.0% |
| !! | TGGTATTGGTGGTGGCGATG+AGG | + | chr3_3:89806887-89806906 | None:intergenic | 55.0% |
| GGAGTAAGCTCGGAGCATGT+TGG | + | chr3_3:89806907-89806926 | None:intergenic | 55.0% | |
| GGTGGCGATGAGGGATTTGG+AGG | + | chr3_3:89805652-89805671 | None:intergenic | 60.0% | |
| ! | GGTGGTGGCGATGAGGGATT+TGG | + | chr3_3:89805655-89805674 | None:intergenic | 60.0% |
| !! | GGGATTGGTGGTGGCGATGA+GGG | + | chr3_3:89805661-89805680 | None:intergenic | 60.0% |
| !! | TGGGATTGGTGGTGGCGATG+AGG | + | chr3_3:89805662-89805681 | None:intergenic | 60.0% |
| GGTGGCGATGAGGGATTTGG+AGG | + | chr3_3:89805652-89805671 | None:intergenic | 60.0% | |
| ! | GGTGGTGGCGATGAGGGATT+TGG | + | chr3_3:89805655-89805674 | None:intergenic | 60.0% |
| !! | GGGGGGAGTTGAGTTGGCAA+GGG | + | chr3_3:89807672-89807691 | None:intergenic | 60.0% |
| ACGGAAATGTGGCAAGGGGC+GGG | + | chr3_3:89807692-89807711 | None:intergenic | 60.0% | |
| CACGGAAATGTGGCAAGGGG+CGG | + | chr3_3:89807693-89807712 | None:intergenic | 60.0% | |
| !! | CGGGGGGAGTTGAGTTGGCA+AGG | + | chr3_3:89807673-89807692 | None:intergenic | 65.0% |
| GAAATGTGGCAAGGGGCGGG+GGG | + | chr3_3:89807689-89807708 | None:intergenic | 65.0% | |
| GGAAATGTGGCAAGGGGCGG+GGG | + | chr3_3:89807690-89807709 | None:intergenic | 65.0% | |
| CGGAAATGTGGCAAGGGGCG+GGG | + | chr3_3:89807691-89807710 | None:intergenic | 65.0% | |
| AGGGGCGGGGGGAGTTGAGT+TGG | + | chr3_3:89807678-89807697 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 89805537 | 89808068 | 89805537 | ID=Msa0482620;Name=Msa0482620 |
| chr3_3 | mRNA | 89805537 | 89808068 | 89805537 | ID=Msa0482620-mRNA-1;Parent=Msa0482620;Name=Msa0482620-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0|0|0.66|0|0.33|3|0|323 |
| chr3_3 | exon | 89807763 | 89808068 | 89807763 | ID=Msa0482620-mRNA-1:exon:26254;Parent=Msa0482620-mRNA-1 |
| chr3_3 | exon | 89806483 | 89806893 | 89806483 | ID=Msa0482620-mRNA-1:exon:26253;Parent=Msa0482620-mRNA-1 |
| chr3_3 | exon | 89805537 | 89805791 | 89805537 | ID=Msa0482620-mRNA-1:exon:26252;Parent=Msa0482620-mRNA-1 |
| chr3_3 | CDS | 89807763 | 89808068 | 89807763 | ID=Msa0482620-mRNA-1:cds;Parent=Msa0482620-mRNA-1 |
| chr3_3 | CDS | 89806483 | 89806893 | 89806483 | ID=Msa0482620-mRNA-1:cds;Parent=Msa0482620-mRNA-1 |
| chr3_3 | CDS | 89805537 | 89805791 | 89805537 | ID=Msa0482620-mRNA-1:cds;Parent=Msa0482620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
