Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0764960 | sp|Q7XA06|SYT3_ARATH | 62.222 | 90 | 34 | 0 | 9 | 98 | 127 | 216 | 8.02e-31 | 119 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0764960 | A0A1S2Z8Y7 | 80.208 | 96 | 19 | 0 | 3 | 98 | 121 | 216 | 1.36e-44 | 156 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015750 | Msa0764960 | 0.819401 | 1.184101e-52 | -8.615850e-47 |
| Msa0016570 | Msa0764960 | 0.856537 | 3.008621e-62 | -8.615850e-47 |
| Msa0016580 | Msa0764960 | 0.827950 | 1.178438e-54 | -8.615850e-47 |
| Msa0017510 | Msa0764960 | 0.802753 | 4.830429e-49 | -8.615850e-47 |
| Msa0064970 | Msa0764960 | 0.827967 | 1.167578e-54 | -8.615850e-47 |
| Msa0071500 | Msa0764960 | 0.801497 | 8.754847e-49 | -8.615850e-47 |
| Msa0078590 | Msa0764960 | 0.803237 | 3.836526e-49 | -8.615850e-47 |
| Msa0110270 | Msa0764960 | 0.814546 | 1.458213e-51 | -8.615850e-47 |
| Msa0604350 | Msa0764960 | 0.800573 | 1.352537e-48 | -8.615850e-47 |
| Msa0636170 | Msa0764960 | 0.812166 | 4.860373e-51 | -8.615850e-47 |
| Msa0650630 | Msa0764960 | 0.801168 | 1.022698e-48 | -8.615850e-47 |
| Msa0657970 | Msa0764960 | 0.818870 | 1.564187e-52 | -8.615850e-47 |
| Msa0673450 | Msa0764960 | 0.825317 | 5.007684e-54 | -8.615850e-47 |
| Msa0673460 | Msa0764960 | 0.806524 | 7.889617e-50 | -8.615850e-47 |
| Msa0678930 | Msa0764960 | 0.821796 | 3.336740e-53 | -8.615850e-47 |
| Msa0694370 | Msa0764960 | 0.806311 | 8.750432e-50 | -8.615850e-47 |
| Msa0726140 | Msa0764960 | 0.819732 | 9.951417e-53 | -8.615850e-47 |
| Msa0729800 | Msa0764960 | 0.811615 | 6.408616e-51 | -8.615850e-47 |
| Msa0731940 | Msa0764960 | 0.807288 | 5.437340e-50 | -8.615850e-47 |
| Msa0741990 | Msa0764960 | 0.801575 | 8.440468e-49 | -8.615850e-47 |
| Msa0743810 | Msa0764960 | 0.812160 | 4.876475e-51 | -8.615850e-47 |
| Msa0745060 | Msa0764960 | 0.828799 | 7.355010e-55 | -8.615850e-47 |
| Msa0759410 | Msa0764960 | 0.804378 | 2.223494e-49 | -8.615850e-47 |
| Msa0762360 | Msa0764960 | 0.806972 | 6.343177e-50 | -8.615850e-47 |
| Msa0764960 | Msa0766630 | 0.803363 | 3.612359e-49 | -8.615850e-47 |
| Msa0764960 | Msa0767720 | 0.828106 | 1.080950e-54 | -8.615850e-47 |
| Msa0764960 | Msa0787600 | 0.804227 | 2.390800e-49 | -8.615850e-47 |
| Msa0764960 | Msa0789250 | 0.948168 | 1.609504e-106 | -8.615850e-47 |
| Msa0764960 | Msa0811080 | 0.826068 | 3.323118e-54 | -8.615850e-47 |
| Msa0764960 | Msa0825860 | 0.819054 | 1.420637e-52 | -8.615850e-47 |
| Msa0764960 | Msa0846330 | 0.817389 | 3.382663e-52 | -8.615850e-47 |
| Msa0764960 | Msa0846350 | 0.816691 | 4.853357e-52 | -8.615850e-47 |
| Msa0764960 | Msa0880140 | 0.800368 | 1.489285e-48 | -8.615850e-47 |
| Msa0764960 | Msa0885280 | 0.824332 | 8.549168e-54 | -8.615850e-47 |
| Msa0764960 | Msa0885290 | 0.802214 | 6.238632e-49 | -8.615850e-47 |
| Msa0764960 | Msa0897880 | 0.800774 | 1.230874e-48 | -8.615850e-47 |
| Msa0764960 | Msa0907070 | 0.806123 | 9.582983e-50 | -8.615850e-47 |
| Msa0764960 | Msa0969260 | 0.812063 | 5.118045e-51 | -8.615850e-47 |
| Msa0764960 | Msa0969450 | 0.806378 | 8.469916e-50 | -8.615850e-47 |
| Msa0764960 | Msa0969520 | 0.814115 | 1.815994e-51 | -8.615850e-47 |
| Msa0764960 | Msa0998690 | 0.800177 | 1.628999e-48 | -8.615850e-47 |
| Msa0764960 | Msa1014540 | 0.803417 | 3.520621e-49 | -8.615850e-47 |
| Msa0764960 | Msa1015730 | 0.808821 | 2.565187e-50 | -8.615850e-47 |
| Msa0764960 | Msa1015800 | 0.810775 | 9.745752e-51 | -8.615850e-47 |
| Msa0764960 | Msa1015810 | 0.805479 | 1.308958e-49 | -8.615850e-47 |
| Msa0764960 | Msa1016280 | 0.800135 | 1.660953e-48 | -8.615850e-47 |
| Msa0764960 | Msa1024240 | 0.837035 | 6.591919e-57 | -8.615850e-47 |
| Msa0764960 | Msa1025360 | 0.816612 | 5.054356e-52 | -8.615850e-47 |
| Msa0764960 | Msa1025370 | 0.806956 | 6.394290e-50 | -8.615850e-47 |
| Msa0764960 | Msa1044830 | 0.801681 | 8.029100e-49 | -8.615850e-47 |
| Msa0764960 | Msa1044840 | 0.814359 | 1.603580e-51 | -8.615850e-47 |
| Msa0764960 | Msa1059570 | 0.830989 | 2.152511e-55 | -8.615850e-47 |
| Msa0764960 | Msa1071110 | 0.813103 | 3.032665e-51 | -8.615850e-47 |
| Msa0764960 | Msa1075220 | -0.801332 | 9.467398e-49 | -8.615850e-47 |
| Msa0764960 | Msa1079180 | 0.809307 | 2.018569e-50 | -8.615850e-47 |
| Msa0764960 | Msa1082500 | 0.807401 | 5.147321e-50 | -8.615850e-47 |
| Msa0764960 | Msa1092990 | 0.846409 | 2.211973e-59 | -8.615850e-47 |
| Msa0764960 | Msa1104630 | 0.818310 | 2.095922e-52 | -8.615850e-47 |
| Msa0764960 | Msa1109440 | 0.804545 | 2.051772e-49 | -8.615850e-47 |
| Msa0764960 | Msa1136090 | 0.815173 | 1.058806e-51 | -8.615850e-47 |
| Msa0764960 | Msa1146110 | 0.843118 | 1.705309e-58 | -8.615850e-47 |
| Msa0764960 | Msa1148020 | 0.838087 | 3.542155e-57 | -8.615850e-47 |
| Msa0764960 | Msa1160670 | 0.832169 | 1.101795e-55 | -8.615850e-47 |
| Msa0764960 | Msa1162550 | -0.804866 | 1.758909e-49 | -8.615850e-47 |
| Msa0764960 | Msa1187940 | 0.852907 | 3.391036e-61 | -8.615850e-47 |
| Msa0764960 | Msa1187950 | 0.833425 | 5.371914e-56 | -8.615850e-47 |
| Msa0764960 | Msa1192640 | 0.802052 | 6.736510e-49 | -8.615850e-47 |
| Msa0764960 | Msa1233890 | 0.805366 | 1.381824e-49 | -8.615850e-47 |
| Msa0764960 | Msa1253020 | 0.807338 | 5.308701e-50 | -8.615850e-47 |
| Msa0764960 | Msa1269670 | 0.822831 | 1.919574e-53 | -8.615850e-47 |
| Msa0764960 | Msa1270230 | 0.853565 | 2.196398e-61 | -8.615850e-47 |
| Msa0764960 | Msa1270240 | 0.822394 | 2.424751e-53 | -8.615850e-47 |
| Msa0764960 | Msa1277660 | 0.805229 | 1.476780e-49 | -8.615850e-47 |
| Msa0764960 | Msa1283330 | 0.825305 | 5.040814e-54 | -8.615850e-47 |
| Msa0764960 | Msa1284680 | 0.831520 | 1.593521e-55 | -8.615850e-47 |
| Msa0764960 | Msa1285930 | 0.820290 | 7.416496e-53 | -8.615850e-47 |
| Msa0764960 | Msa1287800 | 0.808956 | 2.400845e-50 | -8.615850e-47 |
| Msa0764960 | Msa1287810 | 0.813543 | 2.426860e-51 | -8.615850e-47 |
| Msa0764960 | Msa1306850 | 0.807975 | 3.887723e-50 | -8.615850e-47 |
| Msa0764960 | Msa1307890 | 0.809405 | 1.923248e-50 | -8.615850e-47 |
| Msa0764960 | Msa1359040 | 0.821933 | 3.102208e-53 | -8.615850e-47 |
| Msa0764960 | Msa1397860 | 0.826257 | 2.995845e-54 | -8.615850e-47 |
| Msa0764960 | Msa1404000 | 0.825062 | 5.753783e-54 | -8.615850e-47 |
| Msa0764960 | Msa1407060 | 0.801849 | 7.414463e-49 | -8.615850e-47 |
| Msa0764960 | Msa1411020 | 0.800328 | 1.517465e-48 | -8.615850e-47 |
| Msa0764960 | Msa1424290 | 0.801394 | 9.193846e-49 | -8.615850e-47 |
| Msa0764960 | Msa1434350 | 0.802858 | 4.595762e-49 | -8.615850e-47 |
| Msa0764960 | Msa1438250 | 0.812956 | 3.265532e-51 | -8.615850e-47 |
| Msa0764960 | Msa1439320 | 0.801146 | 1.033370e-48 | -8.615850e-47 |
| Msa0764960 | Msa1466540 | 0.811129 | 8.167670e-51 | -8.615850e-47 |
| Msa0142220 | Msa0764960 | 0.835211 | 1.914486e-56 | -8.615850e-47 |
| Msa0157290 | Msa0764960 | 0.803357 | 3.624054e-49 | -8.615850e-47 |
| Msa0188460 | Msa0764960 | 0.804242 | 2.373545e-49 | -8.615850e-47 |
| Msa0384800 | Msa0764960 | 0.808579 | 2.889854e-50 | -8.615850e-47 |
| Msa0402290 | Msa0764960 | 0.828725 | 7.662776e-55 | -8.615850e-47 |
| Msa0414420 | Msa0764960 | 0.802652 | 5.066994e-49 | -8.615850e-47 |
| Msa0431690 | Msa0764960 | 0.807873 | 4.086121e-50 | -8.615850e-47 |
| Msa0432290 | Msa0764960 | 0.815693 | 8.112754e-52 | -8.615850e-47 |
| Msa0437990 | Msa0764960 | 0.813135 | 2.983981e-51 | -8.615850e-47 |
| Msa0438620 | Msa0764960 | 0.812919 | 3.327647e-51 | -8.615850e-47 |
| Msa0452900 | Msa0764960 | 0.809722 | 1.644112e-50 | -8.615850e-47 |
| Msa0453120 | Msa0764960 | 0.834780 | 2.459514e-56 | -8.615850e-47 |
| Msa0239240 | Msa0764960 | 0.813641 | 2.309498e-51 | -8.615850e-47 |
| Msa0256440 | Msa0764960 | 0.809379 | 1.948204e-50 | -8.615850e-47 |
| Msa0266720 | Msa0764960 | 0.819496 | 1.126604e-52 | -8.615850e-47 |
| Msa0267000 | Msa0764960 | 0.800576 | 1.350797e-48 | -8.615850e-47 |
| Msa0267010 | Msa0764960 | 0.809076 | 2.262263e-50 | -8.615850e-47 |
| Msa0270520 | Msa0764960 | 0.809700 | 1.662289e-50 | -8.615850e-47 |
| Msa0273100 | Msa0764960 | 0.802806 | 4.709865e-49 | -8.615850e-47 |
| Msa0288100 | Msa0764960 | 0.808165 | 3.540444e-50 | -8.615850e-47 |
| Msa0295770 | Msa0764960 | 0.811638 | 6.333179e-51 | -8.615850e-47 |
| Msa0304170 | Msa0764960 | 0.816347 | 5.795757e-52 | -8.615850e-47 |
| Msa0306460 | Msa0764960 | 0.832555 | 8.844156e-56 | -8.615850e-47 |
| Msa0309020 | Msa0764960 | 0.807847 | 4.138368e-50 | -8.615850e-47 |
| Msa0342240 | Msa0764960 | 0.814760 | 1.307329e-51 | -8.615850e-47 |
| Msa0355220 | Msa0764960 | 0.830174 | 3.407692e-55 | -8.615850e-47 |
| Msa0506270 | Msa0764960 | 0.805160 | 1.526468e-49 | -8.615850e-47 |
| Msa0512890 | Msa0764960 | 0.804438 | 2.159904e-49 | -8.615850e-47 |
| Msa0537500 | Msa0764960 | 0.803759 | 2.990342e-49 | -8.615850e-47 |
| Msa0541130 | Msa0764960 | 0.842439 | 2.584021e-58 | -8.615850e-47 |
| Msa0545200 | Msa0764960 | 0.816301 | 5.935125e-52 | -8.615850e-47 |
| Msa0598780 | Msa0764960 | 0.803869 | 2.837643e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0764960 | MtrunA17_Chr1g0199571 | 90.000 | 90 | 9 | 0 | 9 | 98 | 127 | 216 | 8.14e-48 | 162 |
| Msa0764960 | MtrunA17_Chr1g0156811 | 54.737 | 95 | 43 | 0 | 3 | 97 | 121 | 215 | 1.22e-29 | 113 |
| Msa0764960 | MtrunA17_Chr4g0037111 | 56.180 | 89 | 39 | 0 | 10 | 98 | 128 | 216 | 2.67e-29 | 109 |
| Msa0764960 | MtrunA17_Chr4g0049851 | 90.698 | 43 | 4 | 0 | 100 | 142 | 81 | 123 | 2.28e-20 | 86.7 |
| Msa0764960 | MtrunA17_Chr4g0049861 | 76.744 | 43 | 10 | 0 | 100 | 142 | 79 | 121 | 1.53e-16 | 75.9 |
| Msa0764960 | MtrunA17_Chr7g0246311 | 33.673 | 98 | 62 | 2 | 3 | 98 | 119 | 215 | 2.20e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0764960 | AT5G04220.3 | 62.222 | 90 | 34 | 0 | 9 | 98 | 65 | 154 | 5.58e-32 | 119 |
| Msa0764960 | AT5G04220.2 | 62.222 | 90 | 34 | 0 | 9 | 98 | 127 | 216 | 8.16e-32 | 119 |
| Msa0764960 | AT2G20990.1 | 54.167 | 96 | 44 | 0 | 3 | 98 | 121 | 216 | 2.68e-29 | 112 |
| Msa0764960 | AT2G20990.3 | 54.167 | 96 | 44 | 0 | 3 | 98 | 121 | 216 | 2.94e-29 | 112 |
| Msa0764960 | AT2G20990.2 | 54.167 | 96 | 44 | 0 | 3 | 98 | 121 | 216 | 3.28e-29 | 112 |
| Msa0764960 | AT1G20080.2 | 50.000 | 96 | 48 | 0 | 3 | 98 | 121 | 216 | 5.49e-28 | 108 |
| Msa0764960 | AT1G20080.3 | 50.000 | 96 | 48 | 0 | 3 | 98 | 121 | 216 | 5.49e-28 | 108 |
| Msa0764960 | AT1G20080.4 | 50.000 | 96 | 48 | 0 | 3 | 98 | 121 | 216 | 5.49e-28 | 108 |
| Msa0764960 | AT1G20080.1 | 50.000 | 96 | 48 | 0 | 3 | 98 | 121 | 216 | 5.49e-28 | 108 |
| Msa0764960 | AT1G20080.5 | 50.000 | 96 | 48 | 0 | 3 | 98 | 121 | 216 | 5.49e-28 | 108 |
| Msa0764960 | AT1G05500.1 | 32.653 | 98 | 65 | 1 | 3 | 99 | 120 | 217 | 2.41e-13 | 67.0 |
| Msa0764960 | AT5G64370.1 | 58.182 | 55 | 17 | 1 | 88 | 142 | 69 | 117 | 1.87e-12 | 64.3 |
| Msa0764960 | AT3G61050.2 | 35.106 | 94 | 58 | 2 | 8 | 99 | 124 | 216 | 6.29e-12 | 63.2 |
| Msa0764960 | AT3G61050.1 | 35.106 | 94 | 58 | 2 | 8 | 99 | 124 | 216 | 6.29e-12 | 63.2 |
| Msa0764960 | AT1G05500.2 | 39.726 | 73 | 43 | 1 | 28 | 99 | 1 | 73 | 2.51e-11 | 61.2 |
Find 46 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGTGTTGAGATTCCTATTA+AGG | 0.189939 | 5_2:-25433171 | Msa0764960:five_prime_UTR |
| ATGCTGATAAAGAAGTATTA+AGG | 0.197682 | 5_2:-25432046 | Msa0764960:CDS |
| AACAATGCCAGTTTAACTTT+TGG | 0.280661 | 5_2:+25433133 | None:intergenic |
| TTCTGCAGGTATGAAAGTTT+TGG | 0.282874 | 5_2:-25432875 | Msa0764960:intron |
| TTTGGAGCAACACCCTTAAT+AGG | 0.284160 | 5_2:+25433158 | None:intergenic |
| TGCAAGGTCAATACTATGTT+TGG | 0.291324 | 5_2:+25432799 | None:intergenic |
| ATATGAAGGGTCTAGCATTA+TGG | 0.303406 | 5_2:-25431893 | Msa0764960:CDS |
| GCTAAGATCAGCAAAATTTC+AGG | 0.326164 | 5_2:-25433080 | Msa0764960:intron |
| GGAAACAAATGAAAAGGAAT+TGG | 0.343840 | 5_2:-25432854 | Msa0764960:CDS |
| CCAAAATCCAAAAGTTAAAC+TGG | 0.349476 | 5_2:-25433140 | Msa0764960:five_prime_UTR |
| GCAGATAAGTTTAAGACCTT+TGG | 0.357838 | 5_2:-25432635 | Msa0764960:CDS |
| TATGAAGGGTCTAGCATTAT+GGG | 0.373158 | 5_2:-25431892 | Msa0764960:CDS |
| TCGATAAAGTGCGCAATTGT+TGG | 0.373558 | 5_2:+25431975 | None:intergenic |
| AAAAGTTAAACTGGCATTGT+TGG | 0.398909 | 5_2:-25433131 | Msa0764960:five_prime_UTR |
| TCATGAAACATGTCATCAAA+TGG | 0.405572 | 5_2:-25432831 | Msa0764960:CDS |
| AGTGTTGAGATTCCTATTAA+GGG | 0.409795 | 5_2:-25433170 | Msa0764960:five_prime_UTR |
| AAAGATTGTGGTGTCTTTGA+TGG | 0.416050 | 5_2:-25432590 | Msa0764960:CDS |
| TGCTGATAAAGAAGTATTAA+GGG | 0.432567 | 5_2:-25432045 | Msa0764960:CDS |
| GCAAGGTCAATACTATGTTT+GGG | 0.443699 | 5_2:+25432800 | None:intergenic |
| CGATAAAGTGCGCAATTGTT+GGG | 0.445360 | 5_2:+25431976 | None:intergenic |
| TAATGCTAGACCCTTCATAT+AGG | 0.482208 | 5_2:+25431896 | None:intergenic |
| GCTAGACCCTTCATATAGGT+TGG | 0.510341 | 5_2:+25431900 | None:intergenic |
| TTTGAGTTGGCGATATCTGG+GGG | 0.510422 | 5_2:-25432439 | Msa0764960:CDS |
| ATGTCTTCCAACCTATATGA+AGG | 0.513407 | 5_2:-25431907 | Msa0764960:CDS |
| GTCTATTAAGATCAAAGTGC+AGG | 0.521581 | 5_2:-25432770 | Msa0764960:intron |
| ACCACAATCTTTGCAAAACA+TGG | 0.526489 | 5_2:+25432601 | None:intergenic |
| AAACATGTCATCAAATGGGC+TGG | 0.527251 | 5_2:-25432826 | Msa0764960:CDS |
| AAGGGAACCTCGAGTTGTGA+GGG | 0.552694 | 5_2:-25432027 | Msa0764960:CDS |
| GAACCTCGAGTTGTGAGGGT+TGG | 0.560787 | 5_2:-25432023 | Msa0764960:CDS |
| TGTGGTGTCTTTGATGGAGA+AGG | 0.563558 | 5_2:-25432584 | Msa0764960:intron |
| GTCTAGCATTATGGGAGGTG+AGG | 0.568423 | 5_2:-25431884 | Msa0764960:CDS |
| CATGAAACATGTCATCAAAT+GGG | 0.570812 | 5_2:-25432830 | Msa0764960:CDS |
| GTTCAATTTACAGCCTCATG+TGG | 0.577586 | 5_2:-25432464 | Msa0764960:intron |
| TAAGGGAACCTCGAGTTGTG+AGG | 0.598332 | 5_2:-25432028 | Msa0764960:CDS |
| AAAGTGCGCAATTGTTGGGA+GGG | 0.605427 | 5_2:+25431980 | None:intergenic |
| TGTCTTCCAACCTATATGAA+GGG | 0.611255 | 5_2:-25431906 | Msa0764960:CDS |
| TTGAGTTGGCGATATCTGGG+GGG | 0.612000 | 5_2:-25432438 | Msa0764960:CDS |
| AAACCAACCCTCACAACTCG+AGG | 0.620062 | 5_2:+25432020 | None:intergenic |
| TAAAGTGCGCAATTGTTGGG+AGG | 0.630263 | 5_2:+25431979 | None:intergenic |
| TGAGTTGGCGATATCTGGGG+GGG | 0.636683 | 5_2:-25432437 | Msa0764960:CDS |
| CTTAATAGACAACACATGCA+AGG | 0.647483 | 5_2:+25432783 | None:intergenic |
| AAAGGTCTTAAACTTATCTG+CGG | 0.650638 | 5_2:+25432637 | None:intergenic |
| GCCAACTCAAAATCCACATG+AGG | 0.675578 | 5_2:+25432451 | None:intergenic |
| CATGGAAGTGTAGACACCAA+AGG | 0.678495 | 5_2:+25432619 | None:intergenic |
| GTGAACACAAGTGAAATGCA+AGG | 0.692141 | 5_2:-25433104 | Msa0764960:exon |
| GAAGGGTCTAGCATTATGGG+AGG | 0.702967 | 5_2:-25431889 | Msa0764960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATTTATCAAATAAGAA+GGG | + | chr5_2:25432584-25432603 | None:intergenic | 10.0% |
| !! | TAATTATTTATCAAATAAGA+AGG | + | chr5_2:25432585-25432604 | None:intergenic | 10.0% |
| !! | AATTATTTATCAAATAAGAA+GGG | + | chr5_2:25432584-25432603 | None:intergenic | 10.0% |
| !! | TAATTATTTATCAAATAAGA+AGG | + | chr5_2:25432585-25432604 | None:intergenic | 10.0% |
| !!! | TGATTTTTATTTTTCTCAGT+TGG | - | chr5_2:25432387-25432406 | Msa0764960:intron | 20.0% |
| !! | CTATAATATAATCATAATCG+CGG | + | chr5_2:25432674-25432693 | None:intergenic | 20.0% |
| !!! | TGATTTTTATTTTTCTCAGT+TGG | - | chr5_2:25432387-25432406 | Msa0764960:intron | 20.0% |
| !! | CTATAATATAATCATAATCG+CGG | + | chr5_2:25432674-25432693 | None:intergenic | 20.0% |
| ! | TGTAAAGCTTTCAAAATACA+AGG | - | chr5_2:25432031-25432050 | Msa0764960:CDS | 25.0% |
| ! | TAATCCTCTCTTTCATTTAT+AGG | - | chr5_2:25432134-25432153 | Msa0764960:intron | 25.0% |
| ! | AATCCTCTCTTTCATTTATA+GGG | - | chr5_2:25432135-25432154 | Msa0764960:intron | 25.0% |
| !!! | AGTTTTGGAAACAAATGAAA+AGG | - | chr5_2:25432210-25432229 | Msa0764960:intron | 25.0% |
| !! | TATTTTCTAATTTTCGGTGA+GGG | + | chr5_2:25432339-25432358 | None:intergenic | 25.0% |
| !! | TTATTTTCTAATTTTCGGTG+AGG | + | chr5_2:25432340-25432359 | None:intergenic | 25.0% |
| ! | TTTCTTCAAATTTCACTTCT+TGG | - | chr5_2:25432525-25432544 | Msa0764960:intron | 25.0% |
| ! | TTCTTCAAATTTCACTTCTT+GGG | - | chr5_2:25432526-25432545 | Msa0764960:intron | 25.0% |
| ! | TTCATCTTGTGATATCATTA+GGG | + | chr5_2:25432815-25432834 | None:intergenic | 25.0% |
| ! | TTTCATCTTGTGATATCATT+AGG | + | chr5_2:25432816-25432835 | None:intergenic | 25.0% |
| ! | TAATGATATCACAAGATGAA+AGG | - | chr5_2:25432815-25432834 | Msa0764960:CDS | 25.0% |
| !! | GTTATTTAAGCTATAGCTTT+TGG | - | chr5_2:25432955-25432974 | Msa0764960:intron | 25.0% |
| !!! | ATGCTGATAAAGAAGTATTA+AGG | - | chr5_2:25433024-25433043 | Msa0764960:intron | 25.0% |
| !!! | TGCTGATAAAGAAGTATTAA+GGG | - | chr5_2:25433025-25433044 | Msa0764960:intron | 25.0% |
| ! | TGTAAAGCTTTCAAAATACA+AGG | - | chr5_2:25432031-25432050 | Msa0764960:CDS | 25.0% |
| ! | TAATCCTCTCTTTCATTTAT+AGG | - | chr5_2:25432134-25432153 | Msa0764960:intron | 25.0% |
| ! | AATCCTCTCTTTCATTTATA+GGG | - | chr5_2:25432135-25432154 | Msa0764960:intron | 25.0% |
| !!! | AGTTTTGGAAACAAATGAAA+AGG | - | chr5_2:25432210-25432229 | Msa0764960:intron | 25.0% |
| !! | TATTTTCTAATTTTCGGTGA+GGG | + | chr5_2:25432339-25432358 | None:intergenic | 25.0% |
| !! | TTATTTTCTAATTTTCGGTG+AGG | + | chr5_2:25432340-25432359 | None:intergenic | 25.0% |
| ! | TTTCTTCAAATTTCACTTCT+TGG | - | chr5_2:25432525-25432544 | Msa0764960:intron | 25.0% |
| ! | TTCTTCAAATTTCACTTCTT+GGG | - | chr5_2:25432526-25432545 | Msa0764960:intron | 25.0% |
| ! | TTCATCTTGTGATATCATTA+GGG | + | chr5_2:25432815-25432834 | None:intergenic | 25.0% |
| ! | TTTCATCTTGTGATATCATT+AGG | + | chr5_2:25432816-25432835 | None:intergenic | 25.0% |
| ! | TAATGATATCACAAGATGAA+AGG | - | chr5_2:25432815-25432834 | Msa0764960:CDS | 25.0% |
| !! | GTTATTTAAGCTATAGCTTT+TGG | - | chr5_2:25432955-25432974 | Msa0764960:intron | 25.0% |
| !!! | ATGCTGATAAAGAAGTATTA+AGG | - | chr5_2:25433024-25433043 | Msa0764960:intron | 25.0% |
| !!! | TGCTGATAAAGAAGTATTAA+GGG | - | chr5_2:25433025-25433044 | Msa0764960:intron | 25.0% |
| ! | TAGTGTTGAGATTCCTATTA+AGG | - | chr5_2:25431899-25431918 | Msa0764960:CDS | 30.0% |
| ! | AGTGTTGAGATTCCTATTAA+GGG | - | chr5_2:25431900-25431919 | Msa0764960:CDS | 30.0% |
| !! | CCAGTTTAACTTTTGGATTT+TGG | + | chr5_2:25431933-25431952 | None:intergenic | 30.0% |
| CCAAAATCCAAAAGTTAAAC+TGG | - | chr5_2:25431930-25431949 | Msa0764960:CDS | 30.0% | |
| !! | AACAATGCCAGTTTAACTTT+TGG | + | chr5_2:25431940-25431959 | None:intergenic | 30.0% |
| AAAAGTTAAACTGGCATTGT+TGG | - | chr5_2:25431939-25431958 | Msa0764960:CDS | 30.0% | |
| ACAAAGCAACAAAATCAAAG+AGG | + | chr5_2:25432057-25432076 | None:intergenic | 30.0% | |
| ! | CTTTGTTTCTTTGATGTGTT+TGG | - | chr5_2:25432071-25432090 | Msa0764960:intron | 30.0% |
| ATCCTCTCTTTCATTTATAG+GGG | - | chr5_2:25432136-25432155 | Msa0764960:intron | 30.0% | |
| ATTGTTTGTAGTAATTCTGC+AGG | - | chr5_2:25432181-25432200 | Msa0764960:intron | 30.0% | |
| GGAAACAAATGAAAAGGAAT+TGG | - | chr5_2:25432216-25432235 | Msa0764960:intron | 30.0% | |
| TCATGAAACATGTCATCAAA+TGG | - | chr5_2:25432239-25432258 | Msa0764960:intron | 30.0% | |
| CATGAAACATGTCATCAAAT+GGG | - | chr5_2:25432240-25432259 | Msa0764960:intron | 30.0% | |
| AAAGGTCTTAAACTTATCTG+CGG | + | chr5_2:25432436-25432455 | None:intergenic | 30.0% | |
| TGAATTGTATTCATACCTTG+AGG | + | chr5_2:25432786-25432805 | None:intergenic | 30.0% | |
| ! | TAGTGTTGAGATTCCTATTA+AGG | - | chr5_2:25431899-25431918 | Msa0764960:CDS | 30.0% |
| ! | AGTGTTGAGATTCCTATTAA+GGG | - | chr5_2:25431900-25431919 | Msa0764960:CDS | 30.0% |
| !! | CCAGTTTAACTTTTGGATTT+TGG | + | chr5_2:25431933-25431952 | None:intergenic | 30.0% |
| CCAAAATCCAAAAGTTAAAC+TGG | - | chr5_2:25431930-25431949 | Msa0764960:CDS | 30.0% | |
| !! | AACAATGCCAGTTTAACTTT+TGG | + | chr5_2:25431940-25431959 | None:intergenic | 30.0% |
| AAAAGTTAAACTGGCATTGT+TGG | - | chr5_2:25431939-25431958 | Msa0764960:CDS | 30.0% | |
| ACAAAGCAACAAAATCAAAG+AGG | + | chr5_2:25432057-25432076 | None:intergenic | 30.0% | |
| ! | CTTTGTTTCTTTGATGTGTT+TGG | - | chr5_2:25432071-25432090 | Msa0764960:intron | 30.0% |
| ATCCTCTCTTTCATTTATAG+GGG | - | chr5_2:25432136-25432155 | Msa0764960:intron | 30.0% | |
| ATTGTTTGTAGTAATTCTGC+AGG | - | chr5_2:25432181-25432200 | Msa0764960:intron | 30.0% | |
| GGAAACAAATGAAAAGGAAT+TGG | - | chr5_2:25432216-25432235 | Msa0764960:intron | 30.0% | |
| TCATGAAACATGTCATCAAA+TGG | - | chr5_2:25432239-25432258 | Msa0764960:intron | 30.0% | |
| CATGAAACATGTCATCAAAT+GGG | - | chr5_2:25432240-25432259 | Msa0764960:intron | 30.0% | |
| AAAGGTCTTAAACTTATCTG+CGG | + | chr5_2:25432436-25432455 | None:intergenic | 30.0% | |
| TGAATTGTATTCATACCTTG+AGG | + | chr5_2:25432786-25432805 | None:intergenic | 30.0% | |
| GCTAAGATCAGCAAAATTTC+AGG | - | chr5_2:25431990-25432009 | Msa0764960:CDS | 35.0% | |
| TACCCCTATAAATGAAAGAG+AGG | + | chr5_2:25432141-25432160 | None:intergenic | 35.0% | |
| ! | TTCTGCAGGTATGAAAGTTT+TGG | - | chr5_2:25432195-25432214 | Msa0764960:intron | 35.0% |
| GCAAGGTCAATACTATGTTT+GGG | + | chr5_2:25432273-25432292 | None:intergenic | 35.0% | |
| TGCAAGGTCAATACTATGTT+TGG | + | chr5_2:25432274-25432293 | None:intergenic | 35.0% | |
| CTTAATAGACAACACATGCA+AGG | + | chr5_2:25432290-25432309 | None:intergenic | 35.0% | |
| GTCTATTAAGATCAAAGTGC+AGG | - | chr5_2:25432300-25432319 | Msa0764960:intron | 35.0% | |
| ! | GCAGATAAGTTTAAGACCTT+TGG | - | chr5_2:25432435-25432454 | Msa0764960:CDS | 35.0% |
| ! | TCCATGTTTTGCAAAGATTG+TGG | - | chr5_2:25432468-25432487 | Msa0764960:intron | 35.0% |
| ACCACAATCTTTGCAAAACA+TGG | + | chr5_2:25432472-25432491 | None:intergenic | 35.0% | |
| AAAGATTGTGGTGTCTTTGA+TGG | - | chr5_2:25432480-25432499 | Msa0764960:intron | 35.0% | |
| !!! | ATTTTGAGTTGGCGATATCT+GGG | - | chr5_2:25432629-25432648 | Msa0764960:CDS | 35.0% |
| GTTGTATTGCTTCCTTAAAC+TGG | - | chr5_2:25432855-25432874 | Msa0764960:CDS | 35.0% | |
| ACAGATAAGTTTCAATGCTG+AGG | + | chr5_2:25432937-25432956 | None:intergenic | 35.0% | |
| GCACTTTATCGAGCAAAAAA+AGG | - | chr5_2:25433106-25433125 | Msa0764960:exon | 35.0% | |
| ATGTCTTCCAACCTATATGA+AGG | - | chr5_2:25433163-25433182 | Msa0764960:five_prime_UTR | 35.0% | |
| TGTCTTCCAACCTATATGAA+GGG | - | chr5_2:25433164-25433183 | Msa0764960:five_prime_UTR | 35.0% | |
| TAATGCTAGACCCTTCATAT+AGG | + | chr5_2:25433177-25433196 | None:intergenic | 35.0% | |
| ATATGAAGGGTCTAGCATTA+TGG | - | chr5_2:25433177-25433196 | Msa0764960:five_prime_UTR | 35.0% | |
| TATGAAGGGTCTAGCATTAT+GGG | - | chr5_2:25433178-25433197 | Msa0764960:five_prime_UTR | 35.0% | |
| GCTAAGATCAGCAAAATTTC+AGG | - | chr5_2:25431990-25432009 | Msa0764960:CDS | 35.0% | |
| TACCCCTATAAATGAAAGAG+AGG | + | chr5_2:25432141-25432160 | None:intergenic | 35.0% | |
| ! | TTCTGCAGGTATGAAAGTTT+TGG | - | chr5_2:25432195-25432214 | Msa0764960:intron | 35.0% |
| GCAAGGTCAATACTATGTTT+GGG | + | chr5_2:25432273-25432292 | None:intergenic | 35.0% | |
| TGCAAGGTCAATACTATGTT+TGG | + | chr5_2:25432274-25432293 | None:intergenic | 35.0% | |
| CTTAATAGACAACACATGCA+AGG | + | chr5_2:25432290-25432309 | None:intergenic | 35.0% | |
| GTCTATTAAGATCAAAGTGC+AGG | - | chr5_2:25432300-25432319 | Msa0764960:intron | 35.0% | |
| ! | GCAGATAAGTTTAAGACCTT+TGG | - | chr5_2:25432435-25432454 | Msa0764960:CDS | 35.0% |
| ! | TCCATGTTTTGCAAAGATTG+TGG | - | chr5_2:25432468-25432487 | Msa0764960:intron | 35.0% |
| ACCACAATCTTTGCAAAACA+TGG | + | chr5_2:25432472-25432491 | None:intergenic | 35.0% | |
| AAAGATTGTGGTGTCTTTGA+TGG | - | chr5_2:25432480-25432499 | Msa0764960:intron | 35.0% | |
| !!! | ATTTTGAGTTGGCGATATCT+GGG | - | chr5_2:25432629-25432648 | Msa0764960:CDS | 35.0% |
| GTTGTATTGCTTCCTTAAAC+TGG | - | chr5_2:25432855-25432874 | Msa0764960:CDS | 35.0% | |
| ACAGATAAGTTTCAATGCTG+AGG | + | chr5_2:25432937-25432956 | None:intergenic | 35.0% | |
| GCACTTTATCGAGCAAAAAA+AGG | - | chr5_2:25433106-25433125 | Msa0764960:exon | 35.0% | |
| ATGTCTTCCAACCTATATGA+AGG | - | chr5_2:25433163-25433182 | Msa0764960:five_prime_UTR | 35.0% | |
| TGTCTTCCAACCTATATGAA+GGG | - | chr5_2:25433164-25433183 | Msa0764960:five_prime_UTR | 35.0% | |
| TAATGCTAGACCCTTCATAT+AGG | + | chr5_2:25433177-25433196 | None:intergenic | 35.0% | |
| ATATGAAGGGTCTAGCATTA+TGG | - | chr5_2:25433177-25433196 | Msa0764960:five_prime_UTR | 35.0% | |
| TATGAAGGGTCTAGCATTAT+GGG | - | chr5_2:25433178-25433197 | Msa0764960:five_prime_UTR | 35.0% | |
| ! | TTTGGAGCAACACCCTTAAT+AGG | + | chr5_2:25431915-25431934 | None:intergenic | 40.0% |
| GTGAACACAAGTGAAATGCA+AGG | - | chr5_2:25431966-25431985 | Msa0764960:CDS | 40.0% | |
| AAACATGTCATCAAATGGGC+TGG | - | chr5_2:25432244-25432263 | Msa0764960:intron | 40.0% | |
| ! | TTCTAATTTTCGGTGAGGGT+AGG | + | chr5_2:25432335-25432354 | None:intergenic | 40.0% |
| TGTCTTTGATGGAGAAGGTA+AGG | - | chr5_2:25432491-25432510 | Msa0764960:intron | 40.0% | |
| GTCTTTGATGGAGAAGGTAA+GGG | - | chr5_2:25432492-25432511 | Msa0764960:intron | 40.0% | |
| GTTCAATTTACAGCCTCATG+TGG | - | chr5_2:25432606-25432625 | Msa0764960:CDS | 40.0% | |
| !!! | GATTTTGAGTTGGCGATATC+TGG | - | chr5_2:25432628-25432647 | Msa0764960:CDS | 40.0% |
| !!! | TTTTGAGTTGGCGATATCTG+GGG | - | chr5_2:25432630-25432649 | Msa0764960:CDS | 40.0% |
| ! | TCACAAGATGAAAGGTATGC+TGG | - | chr5_2:25432823-25432842 | Msa0764960:CDS | 40.0% |
| CGATAAAGTGCGCAATTGTT+GGG | + | chr5_2:25433097-25433116 | None:intergenic | 40.0% | |
| TCGATAAAGTGCGCAATTGT+TGG | + | chr5_2:25433098-25433117 | None:intergenic | 40.0% | |
| !! | TATGGGAGGTGAGGTTTTAA+AGG | - | chr5_2:25433195-25433214 | Msa0764960:five_prime_UTR | 40.0% |
| ! | TTTGGAGCAACACCCTTAAT+AGG | + | chr5_2:25431915-25431934 | None:intergenic | 40.0% |
| GTGAACACAAGTGAAATGCA+AGG | - | chr5_2:25431966-25431985 | Msa0764960:CDS | 40.0% | |
| AAACATGTCATCAAATGGGC+TGG | - | chr5_2:25432244-25432263 | Msa0764960:intron | 40.0% | |
| ! | TTCTAATTTTCGGTGAGGGT+AGG | + | chr5_2:25432335-25432354 | None:intergenic | 40.0% |
| TGTCTTTGATGGAGAAGGTA+AGG | - | chr5_2:25432491-25432510 | Msa0764960:intron | 40.0% | |
| GTCTTTGATGGAGAAGGTAA+GGG | - | chr5_2:25432492-25432511 | Msa0764960:intron | 40.0% | |
| GTTCAATTTACAGCCTCATG+TGG | - | chr5_2:25432606-25432625 | Msa0764960:CDS | 40.0% | |
| !!! | GATTTTGAGTTGGCGATATC+TGG | - | chr5_2:25432628-25432647 | Msa0764960:CDS | 40.0% |
| !!! | TTTTGAGTTGGCGATATCTG+GGG | - | chr5_2:25432630-25432649 | Msa0764960:CDS | 40.0% |
| ! | TCACAAGATGAAAGGTATGC+TGG | - | chr5_2:25432823-25432842 | Msa0764960:CDS | 40.0% |
| CGATAAAGTGCGCAATTGTT+GGG | + | chr5_2:25433097-25433116 | None:intergenic | 40.0% | |
| TCGATAAAGTGCGCAATTGT+TGG | + | chr5_2:25433098-25433117 | None:intergenic | 40.0% | |
| ! | CATGGAAGTGTAGACACCAA+AGG | + | chr5_2:25432454-25432473 | None:intergenic | 45.0% |
| TGTGGTGTCTTTGATGGAGA+AGG | - | chr5_2:25432486-25432505 | Msa0764960:intron | 45.0% | |
| !! | GCCTCATGTGGATTTTGAGT+TGG | - | chr5_2:25432618-25432637 | Msa0764960:CDS | 45.0% |
| GCCAACTCAAAATCCACATG+AGG | + | chr5_2:25432622-25432641 | None:intergenic | 45.0% | |
| !! | TTTGAGTTGGCGATATCTGG+GGG | - | chr5_2:25432631-25432650 | Msa0764960:CDS | 45.0% |
| GAGGTCAAAACCATGTTCCA+CGG | + | chr5_2:25432767-25432786 | None:intergenic | 45.0% | |
| !!! | GGAACATGGTTTTGACCTCA+AGG | - | chr5_2:25432768-25432787 | Msa0764960:intron | 45.0% |
| ! | TGCTCGATTTCTAGACGAGA+CGG | - | chr5_2:25432896-25432915 | Msa0764960:intron | 45.0% |
| AAAGTGCGCAATTGTTGGGA+GGG | + | chr5_2:25433093-25433112 | None:intergenic | 45.0% | |
| TAAAGTGCGCAATTGTTGGG+AGG | + | chr5_2:25433094-25433113 | None:intergenic | 45.0% | |
| GCTAGACCCTTCATATAGGT+TGG | + | chr5_2:25433173-25433192 | None:intergenic | 45.0% | |
| ! | CATGGAAGTGTAGACACCAA+AGG | + | chr5_2:25432454-25432473 | None:intergenic | 45.0% |
| TGTGGTGTCTTTGATGGAGA+AGG | - | chr5_2:25432486-25432505 | Msa0764960:intron | 45.0% | |
| !! | GCCTCATGTGGATTTTGAGT+TGG | - | chr5_2:25432618-25432637 | Msa0764960:CDS | 45.0% |
| GCCAACTCAAAATCCACATG+AGG | + | chr5_2:25432622-25432641 | None:intergenic | 45.0% | |
| !! | TTTGAGTTGGCGATATCTGG+GGG | - | chr5_2:25432631-25432650 | Msa0764960:CDS | 45.0% |
| GAGGTCAAAACCATGTTCCA+CGG | + | chr5_2:25432767-25432786 | None:intergenic | 45.0% | |
| !!! | GGAACATGGTTTTGACCTCA+AGG | - | chr5_2:25432768-25432787 | Msa0764960:intron | 45.0% |
| ! | TGCTCGATTTCTAGACGAGA+CGG | - | chr5_2:25432896-25432915 | Msa0764960:intron | 45.0% |
| AAAGTGCGCAATTGTTGGGA+GGG | + | chr5_2:25433093-25433112 | None:intergenic | 45.0% | |
| TAAAGTGCGCAATTGTTGGG+AGG | + | chr5_2:25433094-25433113 | None:intergenic | 45.0% | |
| GCTAGACCCTTCATATAGGT+TGG | + | chr5_2:25433173-25433192 | None:intergenic | 45.0% | |
| !!! | AATTATTATTTTCTAATTTT+CGG | + | chr5_2:25432345-25432364 | None:intergenic | 5.0% |
| !!! | AATTATTATTTTCTAATTTT+CGG | + | chr5_2:25432345-25432364 | None:intergenic | 5.0% |
| !! | TTGAGTTGGCGATATCTGGG+GGG | - | chr5_2:25432632-25432651 | Msa0764960:CDS | 50.0% |
| CCATCAGTTGCGCCAGTTTA+AGG | + | chr5_2:25432870-25432889 | None:intergenic | 50.0% | |
| CCTTAAACTGGCGCAACTGA+TGG | - | chr5_2:25432867-25432886 | Msa0764960:CDS | 50.0% | |
| ! | TAAGGGAACCTCGAGTTGTG+AGG | - | chr5_2:25433042-25433061 | Msa0764960:intron | 50.0% |
| ! | AAGGGAACCTCGAGTTGTGA+GGG | - | chr5_2:25433043-25433062 | Msa0764960:intron | 50.0% |
| AAACCAACCCTCACAACTCG+AGG | + | chr5_2:25433053-25433072 | None:intergenic | 50.0% | |
| GAAGGGTCTAGCATTATGGG+AGG | - | chr5_2:25433181-25433200 | Msa0764960:five_prime_UTR | 50.0% | |
| GTCTAGCATTATGGGAGGTG+AGG | - | chr5_2:25433186-25433205 | Msa0764960:five_prime_UTR | 50.0% | |
| !! | TTGAGTTGGCGATATCTGGG+GGG | - | chr5_2:25432632-25432651 | Msa0764960:CDS | 50.0% |
| CCATCAGTTGCGCCAGTTTA+AGG | + | chr5_2:25432870-25432889 | None:intergenic | 50.0% | |
| CCTTAAACTGGCGCAACTGA+TGG | - | chr5_2:25432867-25432886 | Msa0764960:CDS | 50.0% | |
| ! | TAAGGGAACCTCGAGTTGTG+AGG | - | chr5_2:25433042-25433061 | Msa0764960:intron | 50.0% |
| ! | AAGGGAACCTCGAGTTGTGA+GGG | - | chr5_2:25433043-25433062 | Msa0764960:intron | 50.0% |
| AAACCAACCCTCACAACTCG+AGG | + | chr5_2:25433053-25433072 | None:intergenic | 50.0% | |
| GAAGGGTCTAGCATTATGGG+AGG | - | chr5_2:25433181-25433200 | Msa0764960:five_prime_UTR | 50.0% | |
| GTCTAGCATTATGGGAGGTG+AGG | - | chr5_2:25433186-25433205 | Msa0764960:five_prime_UTR | 50.0% | |
| ! | TGAGTTGGCGATATCTGGGG+GGG | - | chr5_2:25432633-25432652 | Msa0764960:CDS | 55.0% |
| ATCTGGGGGGGACATCGTAT+AGG | - | chr5_2:25432645-25432664 | Msa0764960:CDS | 55.0% | |
| !! | GAGAGAGCTGTGGCGGATTA+CGG | + | chr5_2:25432745-25432764 | None:intergenic | 55.0% |
| ATGTTCCACGGAGAGAGCTG+TGG | + | chr5_2:25432755-25432774 | None:intergenic | 55.0% | |
| ACAGCTCTCTCCGTGGAACA+TGG | - | chr5_2:25432754-25432773 | Msa0764960:intron | 55.0% | |
| ! | GAACCTCGAGTTGTGAGGGT+TGG | - | chr5_2:25433047-25433066 | Msa0764960:intron | 55.0% |
| ! | TGAGTTGGCGATATCTGGGG+GGG | - | chr5_2:25432633-25432652 | Msa0764960:CDS | 55.0% |
| ATCTGGGGGGGACATCGTAT+AGG | - | chr5_2:25432645-25432664 | Msa0764960:CDS | 55.0% | |
| !! | GAGAGAGCTGTGGCGGATTA+CGG | + | chr5_2:25432745-25432764 | None:intergenic | 55.0% |
| ATGTTCCACGGAGAGAGCTG+TGG | + | chr5_2:25432755-25432774 | None:intergenic | 55.0% | |
| ACAGCTCTCTCCGTGGAACA+TGG | - | chr5_2:25432754-25432773 | Msa0764960:intron | 55.0% | |
| ! | GAACCTCGAGTTGTGAGGGT+TGG | - | chr5_2:25433047-25433066 | Msa0764960:intron | 55.0% |
| TTCCACGGAGAGAGCTGTGG+CGG | + | chr5_2:25432752-25432771 | None:intergenic | 60.0% | |
| TTCCACGGAGAGAGCTGTGG+CGG | + | chr5_2:25432752-25432771 | None:intergenic | 60.0% | |
| ATCCGCCACAGCTCTCTCCG+TGG | - | chr5_2:25432747-25432766 | Msa0764960:intron | 65.0% | |
| ATCCGCCACAGCTCTCTCCG+TGG | - | chr5_2:25432747-25432766 | Msa0764960:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 25431878 | 25433214 | 25431878 | ID=Msa0764960;Name=Msa0764960 |
| chr5_2 | mRNA | 25431878 | 25433214 | 25431878 | ID=Msa0764960-mRNA-1;Parent=Msa0764960;Name=Msa0764960-mRNA-1;_AED=0.11;_eAED=0.11;_QI=103|0.75|0.6|1|1|1|5|0|165 |
| chr5_2 | exon | 25431878 | 25432081 | 25431878 | ID=Msa0764960-mRNA-1:exon:10255;Parent=Msa0764960-mRNA-1 |
| chr5_2 | exon | 25432432 | 25432473 | 25432432 | ID=Msa0764960-mRNA-1:exon:10254;Parent=Msa0764960-mRNA-1 |
| chr5_2 | exon | 25432585 | 25432686 | 25432585 | ID=Msa0764960-mRNA-1:exon:10253;Parent=Msa0764960-mRNA-1 |
| chr5_2 | exon | 25432771 | 25432889 | 25432771 | ID=Msa0764960-mRNA-1:exon:10252;Parent=Msa0764960-mRNA-1 |
| chr5_2 | exon | 25433081 | 25433214 | 25433081 | ID=Msa0764960-mRNA-1:exon:10251;Parent=Msa0764960-mRNA-1 |
| chr5_2 | five_prime_UTR | 25433112 | 25433214 | 25433112 | ID=Msa0764960-mRNA-1:five_prime_utr;Parent=Msa0764960-mRNA-1 |
| chr5_2 | CDS | 25433081 | 25433111 | 25433081 | ID=Msa0764960-mRNA-1:cds;Parent=Msa0764960-mRNA-1 |
| chr5_2 | CDS | 25432771 | 25432889 | 25432771 | ID=Msa0764960-mRNA-1:cds;Parent=Msa0764960-mRNA-1 |
| chr5_2 | CDS | 25432585 | 25432686 | 25432585 | ID=Msa0764960-mRNA-1:cds;Parent=Msa0764960-mRNA-1 |
| chr5_2 | CDS | 25432432 | 25432473 | 25432432 | ID=Msa0764960-mRNA-1:cds;Parent=Msa0764960-mRNA-1 |
| chr5_2 | CDS | 25431878 | 25432081 | 25431878 | ID=Msa0764960-mRNA-1:cds;Parent=Msa0764960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
