Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307890 | sp|Q9ULD4|BRPF3_HUMAN | 40.164 | 122 | 71 | 1 | 59 | 180 | 571 | 690 | 5.22e-18 | 91.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307890 | A4PP03 | 88.203 | 551 | 26 | 5 | 5 | 544 | 2 | 524 | 0.0 | 970 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013750 | Msa1307890 | 0.817462 | 3.256627e-52 | -8.615850e-47 |
| Msa0015750 | Msa1307890 | 0.817429 | 3.312834e-52 | -8.615850e-47 |
| Msa0016570 | Msa1307890 | 0.827866 | 1.235069e-54 | -8.615850e-47 |
| Msa0016580 | Msa1307890 | 0.801970 | 7.001781e-49 | -8.615850e-47 |
| Msa0056530 | Msa1307890 | 0.827414 | 1.584945e-54 | -8.615850e-47 |
| Msa0102070 | Msa1307890 | 0.865444 | 5.878079e-65 | -8.615850e-47 |
| Msa0111510 | Msa1307890 | 0.822316 | 2.528076e-53 | -8.615850e-47 |
| Msa0604350 | Msa1307890 | 0.830171 | 3.412049e-55 | -8.615850e-47 |
| Msa0636170 | Msa1307890 | 0.846559 | 2.012432e-59 | -8.615850e-47 |
| Msa0639610 | Msa1307890 | 0.824940 | 6.145343e-54 | -8.615850e-47 |
| Msa0650630 | Msa1307890 | 0.821668 | 3.572708e-53 | -8.615850e-47 |
| Msa0661230 | Msa1307890 | 0.807864 | 4.104050e-50 | -8.615850e-47 |
| Msa0675830 | Msa1307890 | 0.805153 | 1.531799e-49 | -8.615850e-47 |
| Msa0678930 | Msa1307890 | 0.841102 | 5.822495e-58 | -8.615850e-47 |
| Msa0694370 | Msa1307890 | 0.828709 | 7.732900e-55 | -8.615850e-47 |
| Msa0697060 | Msa1307890 | 0.807349 | 5.279838e-50 | -8.615850e-47 |
| Msa0703120 | Msa1307890 | 0.826961 | 2.034720e-54 | -8.615850e-47 |
| Msa0725850 | Msa1307890 | 0.862367 | 5.327739e-64 | -8.615850e-47 |
| Msa0726140 | Msa1307890 | 0.873233 | 1.723865e-67 | -8.615850e-47 |
| Msa0729800 | Msa1307890 | 0.851538 | 8.316061e-61 | -8.615850e-47 |
| Msa0733290 | Msa1307890 | 0.821373 | 4.179228e-53 | -8.615850e-47 |
| Msa0741990 | Msa1307890 | 0.804570 | 2.027573e-49 | -8.615850e-47 |
| Msa0743810 | Msa1307890 | 0.874134 | 8.564498e-68 | -8.615850e-47 |
| Msa0745060 | Msa1307890 | 0.898961 | 3.174445e-77 | -8.615850e-47 |
| Msa0764960 | Msa1307890 | 0.809405 | 1.923248e-50 | -8.615850e-47 |
| Msa0766630 | Msa1307890 | 0.835597 | 1.529360e-56 | -8.615850e-47 |
| Msa0767720 | Msa1307890 | 0.860107 | 2.600329e-63 | -8.615850e-47 |
| Msa0768290 | Msa1307890 | 0.810578 | 1.074921e-50 | -8.615850e-47 |
| Msa0768310 | Msa1307890 | 0.804988 | 1.658541e-49 | -8.615850e-47 |
| Msa0768370 | Msa1307890 | 0.800484 | 1.410442e-48 | -8.615850e-47 |
| Msa0777870 | Msa1307890 | 0.824049 | 9.960113e-54 | -8.615850e-47 |
| Msa0783160 | Msa1307890 | 0.866771 | 2.233882e-65 | -8.615850e-47 |
| Msa0784290 | Msa1307890 | 0.856066 | 4.134459e-62 | -8.615850e-47 |
| Msa0784300 | Msa1307890 | 0.835818 | 1.344844e-56 | -8.615850e-47 |
| Msa0787600 | Msa1307890 | 0.863167 | 3.020506e-64 | -8.615850e-47 |
| Msa0789250 | Msa1307890 | 0.804972 | 1.670787e-49 | -8.615850e-47 |
| Msa0808010 | Msa1307890 | 0.837857 | 4.058594e-57 | -8.615850e-47 |
| Msa0808020 | Msa1307890 | 0.831741 | 1.405417e-55 | -8.615850e-47 |
| Msa0811080 | Msa1307890 | 0.816535 | 5.261125e-52 | -8.615850e-47 |
| Msa0822870 | Msa1307890 | 0.804032 | 2.624639e-49 | -8.615850e-47 |
| Msa0824600 | Msa1307890 | 0.809294 | 2.031673e-50 | -8.615850e-47 |
| Msa0825860 | Msa1307890 | 0.894875 | 1.633668e-75 | -8.615850e-47 |
| Msa0833290 | Msa1307890 | 0.845494 | 3.922280e-59 | -8.615850e-47 |
| Msa0833300 | Msa1307890 | 0.819849 | 9.357764e-53 | -8.615850e-47 |
| Msa0142220 | Msa1307890 | 0.881263 | 2.776430e-70 | -8.615850e-47 |
| Msa0145750 | Msa1307890 | 0.830439 | 2.935223e-55 | -8.615850e-47 |
| Msa0153910 | Msa1307890 | 0.824701 | 6.997476e-54 | -8.615850e-47 |
| Msa0197010 | Msa1307890 | 0.815311 | 9.866157e-52 | -8.615850e-47 |
| Msa0198910 | Msa1307890 | 0.807336 | 5.311439e-50 | -8.615850e-47 |
| Msa0200000 | Msa1307890 | 0.827389 | 1.607173e-54 | -8.615850e-47 |
| Msa0227480 | Msa1307890 | 0.892264 | 1.863921e-74 | -8.615850e-47 |
| Msa0231000 | Msa1307890 | 0.823390 | 1.421480e-53 | -8.615850e-47 |
| Msa0232850 | Msa1307890 | 0.840311 | 9.384722e-58 | -8.615850e-47 |
| Msa0235140 | Msa1307890 | 0.801275 | 9.725335e-49 | -8.615850e-47 |
| Msa1230430 | Msa1307890 | 0.819565 | 1.086471e-52 | -8.615850e-47 |
| Msa1241010 | Msa1307890 | 0.802145 | 6.447492e-49 | -8.615850e-47 |
| Msa1246880 | Msa1307890 | 0.820181 | 7.855587e-53 | -8.615850e-47 |
| Msa1248300 | Msa1307890 | 0.800834 | 1.196682e-48 | -8.615850e-47 |
| Msa1248310 | Msa1307890 | 0.820499 | 6.642435e-53 | -8.615850e-47 |
| Msa1248370 | Msa1307890 | 0.805469 | 1.315134e-49 | -8.615850e-47 |
| Msa1253000 | Msa1307890 | 0.812392 | 4.338746e-51 | -8.615850e-47 |
| Msa1260100 | Msa1307890 | 0.821797 | 3.334545e-53 | -8.615850e-47 |
| Msa1269670 | Msa1307890 | 0.893435 | 6.302017e-75 | -8.615850e-47 |
| Msa1270230 | Msa1307890 | 0.907392 | 5.322968e-81 | -8.615850e-47 |
| Msa1270240 | Msa1307890 | 0.892036 | 2.297742e-74 | -8.615850e-47 |
| Msa1270270 | Msa1307890 | 0.852370 | 4.827995e-61 | -8.615850e-47 |
| Msa1283330 | Msa1307890 | 0.887844 | 9.985179e-73 | -8.615850e-47 |
| Msa1284680 | Msa1307890 | 0.804172 | 2.454293e-49 | -8.615850e-47 |
| Msa1285930 | Msa1307890 | 0.884096 | 2.566830e-71 | -8.615850e-47 |
| Msa1287800 | Msa1307890 | 0.884856 | 1.341137e-71 | -8.615850e-47 |
| Msa1287810 | Msa1307890 | 0.889242 | 2.885890e-73 | -8.615850e-47 |
| Msa1287830 | Msa1307890 | 0.824830 | 6.525697e-54 | -8.615850e-47 |
| Msa1289420 | Msa1307890 | 0.821362 | 4.203436e-53 | -8.615850e-47 |
| Msa1289430 | Msa1307890 | 0.875718 | 2.470899e-68 | -8.615850e-47 |
| Msa1297210 | Msa1307890 | 0.854096 | 1.545150e-61 | -8.615850e-47 |
| Msa1305480 | Msa1307890 | 0.815746 | 7.892789e-52 | -8.615850e-47 |
| Msa1307890 | Msa1310120 | 0.823226 | 1.552333e-53 | -8.615850e-47 |
| Msa1307890 | Msa1314280 | 0.823084 | 1.675841e-53 | -8.615850e-47 |
| Msa1307890 | Msa1320300 | 0.830036 | 3.681475e-55 | -8.615850e-47 |
| Msa1307890 | Msa1321560 | 0.822824 | 1.926026e-53 | -8.615850e-47 |
| Msa1307890 | Msa1340590 | 0.825404 | 4.776005e-54 | -8.615850e-47 |
| Msa1307890 | Msa1342200 | 0.804122 | 2.513331e-49 | -8.615850e-47 |
| Msa1307890 | Msa1366810 | 0.805864 | 1.086314e-49 | -8.615850e-47 |
| Msa1307890 | Msa1397580 | 0.827534 | 1.483333e-54 | -8.615850e-47 |
| Msa1307890 | Msa1397860 | 0.806075 | 9.807312e-50 | -8.615850e-47 |
| Msa1307890 | Msa1402790 | 0.819638 | 1.045833e-52 | -8.615850e-47 |
| Msa1307890 | Msa1404000 | 0.874926 | 4.608249e-68 | -8.615850e-47 |
| Msa1307890 | Msa1408780 | 0.829793 | 4.219299e-55 | -8.615850e-47 |
| Msa1307890 | Msa1415310 | 0.873055 | 1.976927e-67 | -8.615850e-47 |
| Msa1307890 | Msa1422180 | 0.849982 | 2.278731e-60 | -8.615850e-47 |
| Msa1307890 | Msa1433120 | 0.894403 | 2.548797e-75 | -8.615850e-47 |
| Msa1307890 | Msa1438250 | 0.801384 | 9.235054e-49 | -8.615850e-47 |
| Msa1307890 | Msa1451570 | 0.838079 | 3.558713e-57 | -8.615850e-47 |
| Msa0365500 | Msa1307890 | 0.848610 | 5.491294e-60 | -8.615850e-47 |
| Msa0366580 | Msa1307890 | 0.809359 | 1.967093e-50 | -8.615850e-47 |
| Msa0371730 | Msa1307890 | 0.808329 | 3.267496e-50 | -8.615850e-47 |
| Msa0384800 | Msa1307890 | 0.832420 | 9.550411e-56 | -8.615850e-47 |
| Msa0384890 | Msa1307890 | 0.841078 | 5.908207e-58 | -8.615850e-47 |
| Msa0390070 | Msa1307890 | 0.833779 | 4.384599e-56 | -8.615850e-47 |
| Msa0394970 | Msa1307890 | 0.827292 | 1.695753e-54 | -8.615850e-47 |
| Msa0402290 | Msa1307890 | 0.803846 | 2.869266e-49 | -8.615850e-47 |
| Msa0406120 | Msa1307890 | 0.835926 | 1.262200e-56 | -8.615850e-47 |
| Msa0407750 | Msa1307890 | 0.873670 | 1.228155e-67 | -8.615850e-47 |
| Msa0414410 | Msa1307890 | 0.877250 | 7.302763e-69 | -8.615850e-47 |
| Msa0414420 | Msa1307890 | 0.884293 | 2.169669e-71 | -8.615850e-47 |
| Msa0424550 | Msa1307890 | 0.820518 | 6.576121e-53 | -8.615850e-47 |
| Msa0430420 | Msa1307890 | 0.809863 | 1.533127e-50 | -8.615850e-47 |
| Msa0435230 | Msa1307890 | 0.805069 | 1.594721e-49 | -8.615850e-47 |
| Msa0436780 | Msa1307890 | 0.869839 | 2.292015e-66 | -8.615850e-47 |
| Msa0436800 | Msa1307890 | 0.873495 | 1.407195e-67 | -8.615850e-47 |
| Msa0438620 | Msa1307890 | 0.858550 | 7.629338e-63 | -8.615850e-47 |
| Msa0450000 | Msa1307890 | 0.828696 | 7.788856e-55 | -8.615850e-47 |
| Msa0450570 | Msa1307890 | 0.815321 | 9.817477e-52 | -8.615850e-47 |
| Msa0451730 | Msa1307890 | 0.816709 | 4.809756e-52 | -8.615850e-47 |
| Msa0452620 | Msa1307890 | 0.800293 | 1.542840e-48 | -8.615850e-47 |
| Msa0452900 | Msa1307890 | 0.895260 | 1.134291e-75 | -8.615850e-47 |
| Msa0453120 | Msa1307890 | 0.869015 | 4.247089e-66 | -8.615850e-47 |
| Msa0454370 | Msa1307890 | 0.833847 | 4.215468e-56 | -8.615850e-47 |
| Msa0454910 | Msa1307890 | 0.820749 | 5.817539e-53 | -8.615850e-47 |
| Msa0459160 | Msa1307890 | 0.856200 | 3.778479e-62 | -8.615850e-47 |
| Msa0459170 | Msa1307890 | 0.844962 | 5.463022e-59 | -8.615850e-47 |
| Msa0479340 | Msa1307890 | 0.804716 | 1.890170e-49 | -8.615850e-47 |
| Msa0482620 | Msa1307890 | 0.802695 | 4.966490e-49 | -8.615850e-47 |
| Msa0979850 | Msa1307890 | 0.817166 | 3.797625e-52 | -8.615850e-47 |
| Msa0981370 | Msa1307890 | 0.880287 | 6.212969e-70 | -8.615850e-47 |
| Msa0989060 | Msa1307890 | 0.848723 | 5.111907e-60 | -8.615850e-47 |
| Msa0991820 | Msa1307890 | 0.805418 | 1.348016e-49 | -8.615850e-47 |
| Msa1016280 | Msa1307890 | 0.910989 | 1.009709e-82 | -8.615850e-47 |
| Msa1023050 | Msa1307890 | 0.804502 | 2.094714e-49 | -8.615850e-47 |
| Msa1024240 | Msa1307890 | 0.869020 | 4.234029e-66 | -8.615850e-47 |
| Msa1025360 | Msa1307890 | 0.898273 | 6.235664e-77 | -8.615850e-47 |
| Msa1025370 | Msa1307890 | 0.887909 | 9.423924e-73 | -8.615850e-47 |
| Msa1028230 | Msa1307890 | 0.816805 | 4.576000e-52 | -8.615850e-47 |
| Msa1044830 | Msa1307890 | 0.889264 | 2.829102e-73 | -8.615850e-47 |
| Msa1044840 | Msa1307890 | 0.897243 | 1.698003e-76 | -8.615850e-47 |
| Msa1060840 | Msa1307890 | 0.866054 | 3.773619e-65 | -8.615850e-47 |
| Msa1077460 | Msa1307890 | 0.819277 | 1.263828e-52 | -8.615850e-47 |
| Msa1092990 | Msa1307890 | 0.874217 | 8.026783e-68 | -8.615850e-47 |
| Msa1099970 | Msa1307890 | 0.805410 | 1.353084e-49 | -8.615850e-47 |
| Msa1100980 | Msa1307890 | 0.881827 | 1.736847e-70 | -8.615850e-47 |
| Msa0247260 | Msa1307890 | 0.806212 | 9.177021e-50 | -8.615850e-47 |
| Msa0251320 | Msa1307890 | 0.845581 | 3.713837e-59 | -8.615850e-47 |
| Msa0251640 | Msa1307890 | 0.806921 | 6.504933e-50 | -8.615850e-47 |
| Msa0256440 | Msa1307890 | 0.812294 | 4.558693e-51 | -8.615850e-47 |
| Msa0267000 | Msa1307890 | 0.885149 | 1.042713e-71 | -8.615850e-47 |
| Msa0267010 | Msa1307890 | 0.890974 | 6.062973e-74 | -8.615850e-47 |
| Msa0270520 | Msa1307890 | 0.828778 | 7.439515e-55 | -8.615850e-47 |
| Msa0285810 | Msa1307890 | 0.800459 | 1.427011e-48 | -8.615850e-47 |
| Msa0290870 | Msa1307890 | 0.829667 | 4.529088e-55 | -8.615850e-47 |
| Msa0304170 | Msa1307890 | 0.813970 | 1.954467e-51 | -8.615850e-47 |
| Msa0313760 | Msa1307890 | 0.818759 | 1.657578e-52 | -8.615850e-47 |
| Msa0337900 | Msa1307890 | 0.804363 | 2.239418e-49 | -8.615850e-47 |
| Msa0342240 | Msa1307890 | 0.865516 | 5.579962e-65 | -8.615850e-47 |
| Msa0355220 | Msa1307890 | 0.804497 | 2.099745e-49 | -8.615850e-47 |
| Msa0360510 | Msa1307890 | 0.899050 | 2.906893e-77 | -8.615850e-47 |
| Msa0362420 | Msa1307890 | 0.806012 | 1.011258e-49 | -8.615850e-47 |
| Msa1109440 | Msa1307890 | 0.879674 | 1.027257e-69 | -8.615850e-47 |
| Msa1112300 | Msa1307890 | 0.826708 | 2.339071e-54 | -8.615850e-47 |
| Msa1114030 | Msa1307890 | 0.829581 | 4.751764e-55 | -8.615850e-47 |
| Msa1117150 | Msa1307890 | 0.812483 | 4.145170e-51 | -8.615850e-47 |
| Msa1121200 | Msa1307890 | 0.888576 | 5.221937e-73 | -8.615850e-47 |
| Msa1121480 | Msa1307890 | 0.827839 | 1.253263e-54 | -8.615850e-47 |
| Msa1121490 | Msa1307890 | 0.817988 | 2.478621e-52 | -8.615850e-47 |
| Msa1135740 | Msa1307890 | 0.861751 | 8.233021e-64 | -8.615850e-47 |
| Msa1136090 | Msa1307890 | 0.832688 | 8.195828e-56 | -8.615850e-47 |
| Msa1146110 | Msa1307890 | 0.859875 | 3.054835e-63 | -8.615850e-47 |
| Msa1149360 | Msa1307890 | 0.850951 | 1.217759e-60 | -8.615850e-47 |
| Msa1150370 | Msa1307890 | 0.852864 | 3.488870e-61 | -8.615850e-47 |
| Msa1160670 | Msa1307890 | 0.824130 | 9.537399e-54 | -8.615850e-47 |
| Msa1164120 | Msa1307890 | 0.807671 | 4.511219e-50 | -8.615850e-47 |
| Msa1173920 | Msa1307890 | 0.823208 | 1.567707e-53 | -8.615850e-47 |
| Msa1178340 | Msa1307890 | 0.812353 | 4.424905e-51 | -8.615850e-47 |
| Msa1184420 | Msa1307890 | 0.804817 | 1.800791e-49 | -8.615850e-47 |
| Msa1187940 | Msa1307890 | 0.871655 | 5.792485e-67 | -8.615850e-47 |
| Msa1187950 | Msa1307890 | 0.858445 | 8.199699e-63 | -8.615850e-47 |
| Msa1192640 | Msa1307890 | 0.876730 | 1.107151e-68 | -8.615850e-47 |
| Msa1193730 | Msa1307890 | 0.807294 | 5.423097e-50 | -8.615850e-47 |
| Msa0485030 | Msa1307890 | 0.807703 | 4.441223e-50 | -8.615850e-47 |
| Msa0486950 | Msa1307890 | 0.807999 | 3.841816e-50 | -8.615850e-47 |
| Msa0491590 | Msa1307890 | 0.852372 | 4.821814e-61 | -8.615850e-47 |
| Msa0505080 | Msa1307890 | 0.814735 | 1.324416e-51 | -8.615850e-47 |
| Msa0506190 | Msa1307890 | 0.805114 | 1.560661e-49 | -8.615850e-47 |
| Msa0506270 | Msa1307890 | 0.867481 | 1.325970e-65 | -8.615850e-47 |
| Msa0534540 | Msa1307890 | 0.831252 | 1.854886e-55 | -8.615850e-47 |
| Msa0542450 | Msa1307890 | 0.819850 | 9.353048e-53 | -8.615850e-47 |
| Msa0564890 | Msa1307890 | 0.882341 | 1.129768e-70 | -8.615850e-47 |
| Msa0596150 | Msa1307890 | 0.815273 | 1.005998e-51 | -8.615850e-47 |
| Msa0598780 | Msa1307890 | 0.804443 | 2.155434e-49 | -8.615850e-47 |
| Msa0600700 | Msa1307890 | 0.800685 | 1.283243e-48 | -8.615850e-47 |
| Msa0844490 | Msa1307890 | 0.809208 | 2.119775e-50 | -8.615850e-47 |
| Msa0845930 | Msa1307890 | 0.851702 | 7.471772e-61 | -8.615850e-47 |
| Msa0846210 | Msa1307890 | 0.808651 | 2.789559e-50 | -8.615850e-47 |
| Msa0846330 | Msa1307890 | 0.854839 | 9.420407e-62 | -8.615850e-47 |
| Msa0846350 | Msa1307890 | 0.843233 | 1.589092e-58 | -8.615850e-47 |
| Msa0848960 | Msa1307890 | 0.820620 | 6.228785e-53 | -8.615850e-47 |
| Msa0854980 | Msa1307890 | 0.800688 | 1.281746e-48 | -8.615850e-47 |
| Msa0858980 | Msa1307890 | 0.838603 | 2.607244e-57 | -8.615850e-47 |
| Msa0865320 | Msa1307890 | 0.875958 | 2.043869e-68 | -8.615850e-47 |
| Msa0872230 | Msa1307890 | 0.809010 | 2.337411e-50 | -8.615850e-47 |
| Msa0885280 | Msa1307890 | 0.811312 | 7.456403e-51 | -8.615850e-47 |
| Msa0885290 | Msa1307890 | 0.849846 | 2.487088e-60 | -8.615850e-47 |
| Msa0887920 | Msa1307890 | 0.821276 | 4.400623e-53 | -8.615850e-47 |
| Msa0888370 | Msa1307890 | 0.823257 | 1.526942e-53 | -8.615850e-47 |
| Msa0888420 | Msa1307890 | 0.840208 | 9.985402e-58 | -8.615850e-47 |
| Msa0889850 | Msa1307890 | 0.802437 | 5.611870e-49 | -8.615850e-47 |
| Msa0895270 | Msa1307890 | 0.807539 | 4.812159e-50 | -8.615850e-47 |
| Msa0896080 | Msa1307890 | 0.814516 | 1.480798e-51 | -8.615850e-47 |
| Msa0899430 | Msa1307890 | 0.810743 | 9.903234e-51 | -8.615850e-47 |
| Msa0899450 | Msa1307890 | 0.817812 | 2.715229e-52 | -8.615850e-47 |
| Msa0907260 | Msa1307890 | 0.843443 | 1.397190e-58 | -8.615850e-47 |
| Msa0914760 | Msa1307890 | 0.832956 | 7.028912e-56 | -8.615850e-47 |
| Msa0922720 | Msa1307890 | 0.808792 | 2.601686e-50 | -8.615850e-47 |
| Msa0952720 | Msa1307890 | 0.813171 | 2.929101e-51 | -8.615850e-47 |
| Msa0953120 | Msa1307890 | 0.800858 | 1.183069e-48 | -8.615850e-47 |
| Msa0954910 | Msa1307890 | 0.814426 | 1.550358e-51 | -8.615850e-47 |
| Msa0956270 | Msa1307890 | 0.847476 | 1.128625e-59 | -8.615850e-47 |
| Msa0957680 | Msa1307890 | 0.833340 | 5.642087e-56 | -8.615850e-47 |
| Msa0958550 | Msa1307890 | 0.803865 | 2.842888e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307890 | MtrunA17_Chr8g0334421 | 81.986 | 433 | 21 | 3 | 145 | 544 | 15 | 423 | 0.0 | 701 |
| Msa1307890 | MtrunA17_Chr5g0444391 | 34.385 | 317 | 164 | 10 | 56 | 335 | 169 | 478 | 4.46e-39 | 152 |
| Msa1307890 | MtrunA17_Chr3g0099181 | 33.574 | 277 | 144 | 7 | 68 | 335 | 136 | 381 | 3.42e-36 | 144 |
| Msa1307890 | MtrunA17_Chr3g0143981 | 56.075 | 107 | 47 | 0 | 78 | 184 | 118 | 224 | 5.96e-34 | 136 |
| Msa1307890 | MtrunA17_Chr5g0433041 | 42.982 | 114 | 63 | 2 | 82 | 193 | 1 | 114 | 5.82e-20 | 92.4 |
| Msa1307890 | MtrunA17_Chr7g0230041 | 30.814 | 172 | 103 | 6 | 103 | 270 | 201 | 360 | 2.58e-12 | 69.7 |
| Msa1307890 | MtrunA17_Chr2g0285151 | 27.879 | 165 | 96 | 5 | 103 | 262 | 98 | 244 | 1.10e-11 | 67.4 |
| Msa1307890 | MtrunA17_Chr4g0040981 | 31.633 | 98 | 65 | 1 | 91 | 186 | 662 | 759 | 2.35e-11 | 66.6 |
| Msa1307890 | MtrunA17_Chr4g0049471 | 41.892 | 74 | 41 | 1 | 91 | 162 | 117 | 190 | 2.69e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307890 | AT1G20670.1 | 36.644 | 292 | 148 | 8 | 78 | 335 | 170 | 458 | 4.72e-38 | 149 |
| Msa1307890 | AT1G76380.2 | 32.012 | 328 | 178 | 11 | 79 | 368 | 141 | 461 | 8.69e-34 | 135 |
| Msa1307890 | AT1G76380.1 | 31.077 | 325 | 185 | 9 | 79 | 368 | 140 | 460 | 9.30e-34 | 135 |
| Msa1307890 | AT1G76380.3 | 31.707 | 328 | 179 | 11 | 79 | 368 | 140 | 460 | 7.29e-33 | 133 |
| Msa1307890 | AT5G55040.2 | 31.338 | 284 | 165 | 6 | 79 | 335 | 182 | 462 | 2.77e-31 | 129 |
| Msa1307890 | AT5G55040.1 | 31.338 | 284 | 165 | 6 | 79 | 335 | 182 | 462 | 2.77e-31 | 129 |
| Msa1307890 | AT5G46550.1 | 33.333 | 99 | 59 | 3 | 86 | 182 | 72 | 165 | 6.00e-12 | 68.6 |
| Msa1307890 | AT1G73150.2 | 36.000 | 100 | 62 | 1 | 91 | 188 | 126 | 225 | 1.67e-11 | 67.0 |
| Msa1307890 | AT1G73150.1 | 36.000 | 100 | 62 | 1 | 91 | 188 | 126 | 225 | 1.91e-11 | 66.6 |
Find 91 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCAAGCAGCCTATGGATTT+TGG | 0.176607 | 8_4:-3912866 | Msa1307890:CDS |
| ATGTTGTTTGTTAAAGATTT+AGG | 0.185577 | 8_4:-3911569 | Msa1307890:CDS |
| TAAATGTCAAACAAATATTT+TGG | 0.198683 | 8_4:-3911213 | Msa1307890:CDS |
| AGAATTCTGATTTGGGAATA+AGG | 0.261605 | 8_4:+3911370 | None:intergenic |
| TGGAAGATTGAAAACAAAAT+TGG | 0.263358 | 8_4:+3910962 | None:intergenic |
| ATTCTTTGGATCCACAATTA+AGG | 0.268666 | 8_4:+3911300 | None:intergenic |
| AATTTACAGGCCCGTGTTAT+AGG | 0.277505 | 8_4:-3912517 | Msa1307890:intron |
| TTAGAACAAGAATTCTGATT+TGG | 0.300044 | 8_4:+3911362 | None:intergenic |
| TGAAGACGTGTCTTCAAATA+TGG | 0.306211 | 8_4:+3910942 | None:intergenic |
| TCATATATTGTTGAAACTAT+TGG | 0.307601 | 8_4:+3911773 | None:intergenic |
| CCATACCTGTTTGAAGTATA+TGG | 0.314017 | 8_4:+3912624 | None:intergenic |
| TTGAATCCGTAAAATCTCTT+TGG | 0.336242 | 8_4:+3912398 | None:intergenic |
| CTATGAAATATTTGCTGAAC+CGG | 0.346327 | 8_4:-3913008 | Msa1307890:CDS |
| TTAGGACCACAAACCTCATT+TGG | 0.358045 | 8_4:+3912980 | None:intergenic |
| TAGAACAAGAATTCTGATTT+GGG | 0.361167 | 8_4:+3911363 | None:intergenic |
| TTCTCTGGCAAAAGAGTTGA+TGG | 0.368642 | 8_4:+3913826 | None:intergenic |
| AGTTCAAGTATTTGTTTCTC+TGG | 0.377348 | 8_4:+3913811 | None:intergenic |
| TCTAGCATGAATATGCTTAG+AGG | 0.386209 | 8_4:+3912267 | None:intergenic |
| CGGTTCAGCAAATATTTCAT+AGG | 0.392708 | 8_4:+3913009 | None:intergenic |
| GAAGCACAATGTTCAACAAA+TGG | 0.395303 | 8_4:-3911047 | Msa1307890:CDS |
| TGGAAGCCAATGGTACAGTT+TGG | 0.403001 | 8_4:+3910982 | None:intergenic |
| GACATCAACATATAGCTTGC+AGG | 0.412558 | 8_4:+3911476 | None:intergenic |
| AATTGTGGATCCAAAGAATC+TGG | 0.414503 | 8_4:-3911296 | Msa1307890:CDS |
| TGCAAAAGGTGGAGGGAGAA+AGG | 0.422512 | 8_4:-3914270 | Msa1307890:CDS |
| TTCATTACTTACTAAGAGCC+AGG | 0.423424 | 8_4:+3911151 | None:intergenic |
| TAAGACTCTACAACAATTTG+AGG | 0.425747 | 8_4:-3912810 | Msa1307890:intron |
| TGCATGATAGATAATGTTCA+TGG | 0.425831 | 8_4:-3914229 | Msa1307890:CDS |
| TCAACTTCAGAGTGTGTAAT+GGG | 0.427121 | 8_4:-3911086 | Msa1307890:CDS |
| CAAACCTCATTTGGATCAAC+CGG | 0.430060 | 8_4:+3912989 | None:intergenic |
| AACTCTATTTCAAACTTCTC+AGG | 0.440428 | 8_4:+3912454 | None:intergenic |
| AGAGAAACAAATACTTGAAC+TGG | 0.441995 | 8_4:-3913809 | Msa1307890:CDS |
| TCTCACTGCGTCAACAAATC+AGG | 0.446249 | 8_4:-3914152 | Msa1307890:intron |
| TACAATTGTCAAGCAGCCTA+TGG | 0.449535 | 8_4:-3912873 | Msa1307890:CDS |
| GAATAAAATGAGAAGCTTCA+AGG | 0.469788 | 8_4:-3911441 | Msa1307890:CDS |
| GTACATCTGTTGCAGTTGAT+AGG | 0.479387 | 8_4:-3911829 | Msa1307890:CDS |
| TAGGTTAGTCAACAAGATAA+TGG | 0.479655 | 8_4:-3911608 | Msa1307890:CDS |
| CGGTACCATATACTTCAAAC+AGG | 0.487751 | 8_4:-3912629 | Msa1307890:intron |
| AAATTTAATCTCCTTAATTG+TGG | 0.487861 | 8_4:-3911311 | Msa1307890:CDS |
| AATAAAATGAGAAGCTTCAA+GGG | 0.493964 | 8_4:-3911440 | Msa1307890:CDS |
| ATCAACTTCAGAGTGTGTAA+TGG | 0.498297 | 8_4:-3911087 | Msa1307890:CDS |
| TAAGAGTTTGTATTGTTCCC+AGG | 0.499637 | 8_4:+3910908 | None:intergenic |
| CTGTTTGAAGTATATGGTAC+CGG | 0.504275 | 8_4:+3912630 | None:intergenic |
| ACAAACTTCCACCGCGACCC+TGG | 0.506586 | 8_4:-3911169 | Msa1307890:CDS |
| ATCAAGCCAAACTGTACCAT+TGG | 0.517902 | 8_4:-3910988 | Msa1307890:CDS |
| AAGACTAATCTAGAGATTGA+AGG | 0.518403 | 8_4:-3911416 | Msa1307890:CDS |
| GCTTGATTGCAAAATTTCCA+TGG | 0.522849 | 8_4:+3911004 | None:intergenic |
| AAGCACAATGTTCAACAAAT+GGG | 0.529241 | 8_4:-3911046 | Msa1307890:CDS |
| CAGGAAATTGCAAAAGGTGG+AGG | 0.533277 | 8_4:-3914278 | Msa1307890:CDS |
| TAGTTGCTCATTTAAAGCCA+TGG | 0.533681 | 8_4:-3911021 | Msa1307890:CDS |
| ATAGCTAAAAGAAAATTACT+TGG | 0.539919 | 8_4:-3911530 | Msa1307890:CDS |
| TATTTCAAACTTCTCAGGAT+CGG | 0.547797 | 8_4:+3912459 | None:intergenic |
| TTGAAACTATTGGCTCGTCC+CGG | 0.550019 | 8_4:+3911783 | None:intergenic |
| GGCCCGTGTTATAGGTGAGT+TGG | 0.564814 | 8_4:-3912509 | Msa1307890:CDS |
| GGTGTCATGAAAACTTGTCT+TGG | 0.564950 | 8_4:+3912288 | None:intergenic |
| TGGTCTTGCATTTCGTACAA+AGG | 0.573543 | 8_4:-3914209 | Msa1307890:CDS |
| CTCAGAAACAAGGCAGCAAG+TGG | 0.574246 | 8_4:-3912431 | Msa1307890:CDS |
| AGCCAACTCACCTATAACAC+GGG | 0.581645 | 8_4:+3912507 | None:intergenic |
| AAAACAAAATTGGAAGCCAA+TGG | 0.584589 | 8_4:+3910972 | None:intergenic |
| TGAACCGGTTGATCCAAATG+AGG | 0.587328 | 8_4:-3912993 | Msa1307890:intron |
| AGGAAATTGCAAAAGGTGGA+GGG | 0.590246 | 8_4:-3914277 | Msa1307890:CDS |
| GTCTTCATAAGATAGACTCC+TGG | 0.592639 | 8_4:-3910926 | Msa1307890:CDS |
| AGAGATGTAGAGGTTCAGAC+AGG | 0.595283 | 8_4:-3912247 | Msa1307890:intron |
| TGTTATTTATCAGGTAACAA+AGG | 0.598816 | 8_4:-3911863 | Msa1307890:intron |
| GTTGACGCAGTGAGATGTTG+AGG | 0.601567 | 8_4:+3914160 | None:intergenic |
| TATTCATGCTAGAGATGTAG+AGG | 0.603041 | 8_4:-3912257 | Msa1307890:CDS |
| TCATTACTTACTAAGAGCCA+GGG | 0.604100 | 8_4:+3911152 | None:intergenic |
| AAATAGAGTTCTCAGAAACA+AGG | 0.605162 | 8_4:-3912441 | Msa1307890:CDS |
| AATCTAGAGATTGAAGGTGA+AGG | 0.605625 | 8_4:-3911410 | Msa1307890:CDS |
| CTCATAGTGCCAAAATCCAT+AGG | 0.610152 | 8_4:+3912857 | None:intergenic |
| TCTTCATAAGATAGACTCCT+GGG | 0.611934 | 8_4:-3910925 | Msa1307890:CDS |
| CTTACTAAGAGCCAGGGTCG+CGG | 0.614049 | 8_4:+3911158 | None:intergenic |
| AATGTGTCATGTTCTTCCCA+TGG | 0.624018 | 8_4:-3912331 | Msa1307890:CDS |
| GAACATGACACATTATGTGA+GGG | 0.629256 | 8_4:+3912340 | None:intergenic |
| TGCCGATGTATACAATGACC+AGG | 0.637697 | 8_4:-3914383 | Msa1307890:intron |
| AACCTGGTCATTGTATACAT+CGG | 0.647541 | 8_4:+3914381 | None:intergenic |
| GTGTGGCAGGAAATTGCAAA+AGG | 0.648736 | 8_4:-3914284 | Msa1307890:intron |
| AACACCTTTGTAAAGTGTCG+AGG | 0.649588 | 8_4:+3913785 | None:intergenic |
| TGGCAGGAAATTGCAAAAGG+TGG | 0.654572 | 8_4:-3914281 | Msa1307890:intron |
| AGAACATGACACATTATGTG+AGG | 0.656098 | 8_4:+3912339 | None:intergenic |
| TAGCCAACTCACCTATAACA+CGG | 0.656976 | 8_4:+3912506 | None:intergenic |
| CTATCATGCAAGATATACGT+GGG | 0.657847 | 8_4:+3914242 | None:intergenic |
| ACTAAGAGCCAGGGTCGCGG+TGG | 0.657974 | 8_4:+3911161 | None:intergenic |
| AAAAGGTGGAGGGAGAAAGG+AGG | 0.662217 | 8_4:-3914267 | Msa1307890:CDS |
| TCTATCATGCAAGATATACG+TGG | 0.666222 | 8_4:+3914241 | None:intergenic |
| TGTTTGAAGTATATGGTACC+GGG | 0.666875 | 8_4:+3912631 | None:intergenic |
| AACATGACACATTATGTGAG+GGG | 0.668827 | 8_4:+3912341 | None:intergenic |
| TCAGAAACAAGGCAGCAAGT+GGG | 0.681336 | 8_4:-3912430 | Msa1307890:CDS |
| TCTGGCAAAAGAGTTGATGG+CGG | 0.686549 | 8_4:+3913829 | None:intergenic |
| GACGCAGTGAGATGTTGAGG+TGG | 0.687454 | 8_4:+3914163 | None:intergenic |
| TGGTCCTCGACACTTTACAA+AGG | 0.707754 | 8_4:-3913789 | Msa1307890:intron |
| TTGAAGTATATGGTACCGGG+AGG | 0.712644 | 8_4:+3912634 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTAATTATTAA+AGG | + | chr8_4:3912178-3912197 | None:intergenic | 0.0% |
| !! | TATAAAAAGAAATATTATCT+TGG | - | chr8_4:3911916-3911935 | Msa1307890:intron | 10.0% |
| !! | GTCAATATTAAAACTATTAT+TGG | - | chr8_4:3911812-3911831 | Msa1307890:CDS | 15.0% |
| !! | ACATAAAAATATGAGTTATA+AGG | + | chr8_4:3912369-3912388 | None:intergenic | 15.0% |
| !!! | TCATATTTTTATGTATTTTC+TGG | - | chr8_4:3912375-3912394 | Msa1307890:CDS | 15.0% |
| !!! | CATATTTTTATGTATTTTCT+GGG | - | chr8_4:3912376-3912395 | Msa1307890:CDS | 15.0% |
| !!! | TTACAATTTTGTTATTTATC+AGG | - | chr8_4:3913417-3913436 | Msa1307890:intron | 15.0% |
| !!! | TTTTCTTTTAGCTATATTTT+GGG | + | chr8_4:3913754-3913773 | None:intergenic | 15.0% |
| !!! | ATTTTCTTTTAGCTATATTT+TGG | + | chr8_4:3913755-3913774 | None:intergenic | 15.0% |
| !!! | TAAATGTCAAACAAATATTT+TGG | - | chr8_4:3914076-3914095 | Msa1307890:intron | 15.0% |
| !! | ATACTTAATAAGTCATTACA+GGG | - | chr8_4:3911242-3911261 | Msa1307890:CDS | 20.0% |
| !! | TACAAGACAGAATTATATTA+AGG | + | chr8_4:3911566-3911585 | None:intergenic | 20.0% |
| !! | TATAATTCTGTCTTGTATAA+AGG | - | chr8_4:3911569-3911588 | Msa1307890:CDS | 20.0% |
| !!! | CCTTGAACTTTAAAATAATA+TGG | + | chr8_4:3911764-3911783 | None:intergenic | 20.0% |
| !!! | CCATATTATTTTAAAGTTCA+AGG | - | chr8_4:3911761-3911780 | Msa1307890:CDS | 20.0% |
| !!! | AGTACCAATAATAGTTTTTA+GGG | + | chr8_4:3912055-3912074 | None:intergenic | 20.0% |
| !!! | CTCTATTTTATTCTTCTAAT+AGG | - | chr8_4:3912124-3912143 | Msa1307890:intron | 20.0% |
| !!! | ATTTTATTCTTCTAATAGGT+TGG | - | chr8_4:3912128-3912147 | Msa1307890:intron | 20.0% |
| !! | ACAACATACAATGAAAAATT+AGG | + | chr8_4:3912330-3912349 | None:intergenic | 20.0% |
| !!! | TAATTTTTCATTGTATGTTG+TGG | - | chr8_4:3912329-3912348 | Msa1307890:CDS | 20.0% |
| !!! | AAAAAACCAAAGAGATTTTA+CGG | - | chr8_4:3912885-3912904 | Msa1307890:CDS | 20.0% |
| !!! | GACTTCAATAATTGTTTTAT+TGG | + | chr8_4:3912929-3912948 | None:intergenic | 20.0% |
| !! | TCATATATTGTTGAAACTAT+TGG | + | chr8_4:3913519-3913538 | None:intergenic | 20.0% |
| !!! | ATGTTGTTTGTTAAAGATTT+AGG | - | chr8_4:3913720-3913739 | Msa1307890:intron | 20.0% |
| !! | ATAGCTAAAAGAAAATTACT+TGG | - | chr8_4:3913759-3913778 | Msa1307890:intron | 20.0% |
| !! | AAATTTAATCTCCTTAATTG+TGG | - | chr8_4:3913978-3913997 | Msa1307890:intron | 20.0% |
| !!! | CATATAGATTTTATCTTGAT+TGG | + | chr8_4:3914177-3914196 | None:intergenic | 20.0% |
| ! | TTCATAAAATTTGATGTGTG+TGG | - | chr8_4:3910988-3911007 | Msa1307890:CDS | 25.0% |
| !!! | CTACATTTTTTCCTTATCTT+AGG | - | chr8_4:3911193-3911212 | Msa1307890:CDS | 25.0% |
| !!! | ATTTTTTCCTTATCTTAGGT+CGG | - | chr8_4:3911197-3911216 | Msa1307890:CDS | 25.0% |
| ! | GATACTTAATAAGTCATTAC+AGG | - | chr8_4:3911241-3911260 | Msa1307890:CDS | 25.0% |
| ! | ATTAAAAAGAAAAACGTCAG+TGG | - | chr8_4:3911281-3911300 | Msa1307890:CDS | 25.0% |
| ! | AAAGAGTGAGATGTATTATT+TGG | - | chr8_4:3911706-3911725 | Msa1307890:intron | 25.0% |
| ! | TTATTTGGTATACAACTTCT+TGG | - | chr8_4:3911721-3911740 | Msa1307890:intron | 25.0% |
| !!! | TGACTTTTCATTCTACTTTT+AGG | - | chr8_4:3911997-3912016 | Msa1307890:intron | 25.0% |
| !! | TAGGTCCTTAACTAATTTTT+CGG | - | chr8_4:3912016-3912035 | Msa1307890:intron | 25.0% |
| ! | AAGACCCTAAAAACTATTAT+TGG | - | chr8_4:3912048-3912067 | Msa1307890:intron | 25.0% |
| !! | CAGTACCAATAATAGTTTTT+AGG | + | chr8_4:3912056-3912075 | None:intergenic | 25.0% |
| !!! | TTTTTATGTATTTTCTGGGA+AGG | - | chr8_4:3912380-3912399 | Msa1307890:CDS | 25.0% |
| ! | TATTCGATAGTGAAATTTGT+GGG | + | chr8_4:3912715-3912734 | None:intergenic | 25.0% |
| ! | ATATTCGATAGTGAAATTTG+TGG | + | chr8_4:3912716-3912735 | None:intergenic | 25.0% |
| ! | TTTCTACCATATCAATTTAC+AGG | - | chr8_4:3912759-3912778 | Msa1307890:intron | 25.0% |
| ! | AGTAAAATACAATTCACCAA+GGG | + | chr8_4:3913187-3913206 | None:intergenic | 25.0% |
| ! | AAGTAAAATACAATTCACCA+AGG | + | chr8_4:3913188-3913207 | None:intergenic | 25.0% |
| ! | ACTAAGTTTGGTATTATACA+AGG | - | chr8_4:3913221-3913240 | Msa1307890:intron | 25.0% |
| !! | AATTTTCAGATTTAGACCTT+TGG | + | chr8_4:3913268-3913287 | None:intergenic | 25.0% |
| ! | GGATGAAAAATATTCATAAG+AGG | + | chr8_4:3913297-3913316 | None:intergenic | 25.0% |
| !! | TGTTATTTATCAGGTAACAA+AGG | - | chr8_4:3913426-3913445 | Msa1307890:intron | 25.0% |
| ! | TTCGCAAAATGCATAAATTA+TGG | - | chr8_4:3913606-3913625 | Msa1307890:intron | 25.0% |
| ! | ATTATGTCTACTCTTTGTAT+AGG | - | chr8_4:3913662-3913681 | Msa1307890:intron | 25.0% |
| !! | AAGCTTCTCATTTTATTCAA+TGG | + | chr8_4:3913846-3913865 | None:intergenic | 25.0% |
| ! | AATAAAATGAGAAGCTTCAA+GGG | - | chr8_4:3913849-3913868 | Msa1307890:CDS | 25.0% |
| ! | GTGAAGGAAAAAAGATTATA+GGG | - | chr8_4:3913895-3913914 | Msa1307890:intron | 25.0% |
| ! | TAGAACAAGAATTCTGATTT+GGG | + | chr8_4:3913929-3913948 | None:intergenic | 25.0% |
| ! | TTAGAACAAGAATTCTGATT+TGG | + | chr8_4:3913930-3913949 | None:intergenic | 25.0% |
| !!! | AAACAAATATTTTGGAGTCA+AGG | - | chr8_4:3914084-3914103 | Msa1307890:intron | 25.0% |
| ! | TGGAAGATTGAAAACAAAAT+TGG | + | chr8_4:3914330-3914349 | None:intergenic | 25.0% |
| TGCATGATAGATAATGTTCA+TGG | - | chr8_4:3911060-3911079 | Msa1307890:CDS | 30.0% | |
| ACAAAAAGAGGACAAAACTA+AGG | - | chr8_4:3911103-3911122 | Msa1307890:CDS | 30.0% | |
| TTTGAATATAATAGCTAGCG+TGG | + | chr8_4:3911380-3911399 | None:intergenic | 30.0% | |
| ! | AGTTCAAGTATTTGTTTCTC+TGG | + | chr8_4:3911481-3911500 | None:intergenic | 30.0% |
| AGAGAAACAAATACTTGAAC+TGG | - | chr8_4:3911480-3911499 | Msa1307890:CDS | 30.0% | |
| ! | TCTGATTTTGTATGAATGTC+AGG | - | chr8_4:3911592-3911611 | Msa1307890:CDS | 30.0% |
| TTATTGGCATGTCTGTTATA+AGG | - | chr8_4:3911828-3911847 | Msa1307890:CDS | 30.0% | |
| ATGTCTGTTATAAGGATTGT+AGG | - | chr8_4:3911836-3911855 | Msa1307890:CDS | 30.0% | |
| !! | CTTTGATTTTCTGATCTCTT+GGG | - | chr8_4:3912076-3912095 | Msa1307890:intron | 30.0% |
| !! | TTTGATTTTCTGATCTCTTG+GGG | - | chr8_4:3912077-3912096 | Msa1307890:intron | 30.0% |
| GAATGTATACTTTATGACAC+AGG | - | chr8_4:3912250-3912269 | Msa1307890:CDS | 30.0% | |
| ! | CTATGAAATATTTGCTGAAC+CGG | - | chr8_4:3912281-3912300 | Msa1307890:CDS | 30.0% |
| TAAGACTCTACAACAATTTG+AGG | - | chr8_4:3912479-3912498 | Msa1307890:CDS | 30.0% | |
| AGGTTGAAGTTTACAAACAT+TGG | - | chr8_4:3912499-3912518 | Msa1307890:CDS | 30.0% | |
| AAAAACATCATGCTGCATAA+TGG | + | chr8_4:3912605-3912624 | None:intergenic | 30.0% | |
| TATTTCAAACTTCTCAGGAT+CGG | + | chr8_4:3912833-3912852 | None:intergenic | 30.0% | |
| AACTCTATTTCAAACTTCTC+AGG | + | chr8_4:3912838-3912857 | None:intergenic | 30.0% | |
| AAATAGAGTTCTCAGAAACA+AGG | - | chr8_4:3912848-3912867 | Msa1307890:CDS | 30.0% | |
| TTGAATCCGTAAAATCTCTT+TGG | + | chr8_4:3912894-3912913 | None:intergenic | 30.0% | |
| !!! | AACTTGTCTTGGCAATTTTT+TGG | + | chr8_4:3912993-3913012 | None:intergenic | 30.0% |
| GTAAAATACAATTCACCAAG+GGG | + | chr8_4:3913186-3913205 | None:intergenic | 30.0% | |
| CAACTTTCTACTACTAAGTT+TGG | - | chr8_4:3913209-3913228 | Msa1307890:intron | 30.0% | |
| ! | TAGGTTAGTCAACAAGATAA+TGG | - | chr8_4:3913681-3913700 | Msa1307890:intron | 30.0% |
| GAATAAAATGAGAAGCTTCA+AGG | - | chr8_4:3913848-3913867 | Msa1307890:CDS | 30.0% | |
| AAGACTAATCTAGAGATTGA+AGG | - | chr8_4:3913873-3913892 | Msa1307890:intron | 30.0% | |
| GGTGAAGGAAAAAAGATTAT+AGG | - | chr8_4:3913894-3913913 | Msa1307890:intron | 30.0% | |
| !! | AGAATTCTGATTTGGGAATA+AGG | + | chr8_4:3913922-3913941 | None:intergenic | 30.0% |
| ATTCTTTGGATCCACAATTA+AGG | + | chr8_4:3913992-3914011 | None:intergenic | 30.0% | |
| AAGCACAATGTTCAACAAAT+GGG | - | chr8_4:3914243-3914262 | Msa1307890:CDS | 30.0% | |
| AAAACAAAATTGGAAGCCAA+TGG | + | chr8_4:3914320-3914339 | None:intergenic | 30.0% | |
| AACCTGGTCATTGTATACAT+CGG | + | chr8_4:3910911-3910930 | None:intergenic | 35.0% | |
| TAAAATTTGATGTGTGTGGC+AGG | - | chr8_4:3910992-3911011 | Msa1307890:CDS | 35.0% | |
| CTATCATGCAAGATATACGT+GGG | + | chr8_4:3911050-3911069 | None:intergenic | 35.0% | |
| TCTATCATGCAAGATATACG+TGG | + | chr8_4:3911051-3911070 | None:intergenic | 35.0% | |
| TTCGTACAAAGGACAAAAAG+AGG | - | chr8_4:3911091-3911110 | Msa1307890:CDS | 35.0% | |
| AGTAAAACCGACCTAAGATA+AGG | + | chr8_4:3911207-3911226 | None:intergenic | 35.0% | |
| GTTTGAATCATCACATCACA+TGG | + | chr8_4:3911348-3911367 | None:intergenic | 35.0% | |
| ! | TAAGGTTTTCTGATTGTGAC+AGG | + | chr8_4:3911548-3911567 | None:intergenic | 35.0% |
| GTCTGATTGATAGACTGTAA+TGG | - | chr8_4:3911634-3911653 | Msa1307890:intron | 35.0% | |
| ATTGATAGACTGTAATGGTG+TGG | - | chr8_4:3911639-3911658 | Msa1307890:intron | 35.0% | |
| ! | AAATGTTAACAAAGTGCCTC+TGG | - | chr8_4:3911876-3911895 | Msa1307890:intron | 35.0% |
| ! | AATGTTAACAAAGTGCCTCT+GGG | - | chr8_4:3911877-3911896 | Msa1307890:intron | 35.0% |
| !! | TCCTTAACTAATTTTTCGGC+CGG | - | chr8_4:3912020-3912039 | Msa1307890:intron | 35.0% |
| !!! | GTTTTTAGGGTCTTGTTAAC+CGG | + | chr8_4:3912042-3912061 | None:intergenic | 35.0% |
| !! | GCTTTGATTTTCTGATCTCT+TGG | - | chr8_4:3912075-3912094 | Msa1307890:intron | 35.0% |
| CGGTTCAGCAAATATTTCAT+AGG | + | chr8_4:3912283-3912302 | None:intergenic | 35.0% | |
| !! | TATGGATTTTGGCACTATGA+GGG | - | chr8_4:3912434-3912453 | Msa1307890:CDS | 35.0% |
| ! | TGTTTGAAGTATATGGTACC+GGG | + | chr8_4:3912661-3912680 | None:intergenic | 35.0% |
| ! | CTGTTTGAAGTATATGGTAC+CGG | + | chr8_4:3912662-3912681 | None:intergenic | 35.0% |
| ! | CCATACCTGTTTGAAGTATA+TGG | + | chr8_4:3912668-3912687 | None:intergenic | 35.0% |
| CCATATACTTCAAACAGGTA+TGG | - | chr8_4:3912665-3912684 | Msa1307890:CDS | 35.0% | |
| AACATGACACATTATGTGAG+GGG | + | chr8_4:3912951-3912970 | None:intergenic | 35.0% | |
| GAACATGACACATTATGTGA+GGG | + | chr8_4:3912952-3912971 | None:intergenic | 35.0% | |
| AGAACATGACACATTATGTG+AGG | + | chr8_4:3912953-3912972 | None:intergenic | 35.0% | |
| TCTAGCATGAATATGCTTAG+AGG | + | chr8_4:3913025-3913044 | None:intergenic | 35.0% | |
| TATTCATGCTAGAGATGTAG+AGG | - | chr8_4:3913032-3913051 | Msa1307890:intron | 35.0% | |
| CATCTAAAAATTCTTCCCCT+TGG | - | chr8_4:3913168-3913187 | Msa1307890:intron | 35.0% | |
| ATGCACTTCTATCATTCCAA+AGG | - | chr8_4:3913249-3913268 | Msa1307890:intron | 35.0% | |
| AATTGAGCTTCACTAAGCTT+TGG | + | chr8_4:3913318-3913337 | None:intergenic | 35.0% | |
| CCACTACACAAATTATTACG+AGG | + | chr8_4:3913370-3913389 | None:intergenic | 35.0% | |
| ! | CCTCGTAATAATTTGTGTAG+TGG | - | chr8_4:3913367-3913386 | Msa1307890:intron | 35.0% |
| ! | GTACTTATCGACGTTTTTAC+CGG | - | chr8_4:3913487-3913506 | Msa1307890:intron | 35.0% |
| ! | TACTTATCGACGTTTTTACC+GGG | - | chr8_4:3913488-3913507 | Msa1307890:intron | 35.0% |
| !! | TTAGCTATATTTTGGGCAGT+AGG | + | chr8_4:3913747-3913766 | None:intergenic | 35.0% |
| AATCTAGAGATTGAAGGTGA+AGG | - | chr8_4:3913879-3913898 | Msa1307890:intron | 35.0% | |
| AATTGTGGATCCAAAGAATC+TGG | - | chr8_4:3913993-3914012 | Msa1307890:intron | 35.0% | |
| ! | AGACTTTTTGCCAGATTCTT+TGG | + | chr8_4:3914006-3914025 | None:intergenic | 35.0% |
| AAGAATCTGGCAAAAAGTCT+AGG | - | chr8_4:3914006-3914025 | Msa1307890:intron | 35.0% | |
| TCATTACTTACTAAGAGCCA+GGG | + | chr8_4:3914140-3914159 | None:intergenic | 35.0% | |
| TTCATTACTTACTAAGAGCC+AGG | + | chr8_4:3914141-3914160 | None:intergenic | 35.0% | |
| ATCAACTTCAGAGTGTGTAA+TGG | - | chr8_4:3914202-3914221 | Msa1307890:CDS | 35.0% | |
| TCAACTTCAGAGTGTGTAAT+GGG | - | chr8_4:3914203-3914222 | Msa1307890:CDS | 35.0% | |
| GAAGCACAATGTTCAACAAA+TGG | - | chr8_4:3914242-3914261 | Msa1307890:CDS | 35.0% | |
| ! | TAGTTGCTCATTTAAAGCCA+TGG | - | chr8_4:3914268-3914287 | Msa1307890:CDS | 35.0% |
| GCTTGATTGCAAAATTTCCA+TGG | + | chr8_4:3914288-3914307 | None:intergenic | 35.0% | |
| TGAAGACGTGTCTTCAAATA+TGG | + | chr8_4:3914350-3914369 | None:intergenic | 35.0% | |
| TCTTCATAAGATAGACTCCT+GGG | - | chr8_4:3914364-3914383 | Msa1307890:intron | 35.0% | |
| TAAGAGTTTGTATTGTTCCC+AGG | + | chr8_4:3914384-3914403 | None:intergenic | 35.0% | |
| TGTATACAATGACCAGGTTG+AGG | - | chr8_4:3910912-3910931 | Msa1307890:CDS | 40.0% | |
| AGGAAATTGCAAAAGGTGGA+GGG | - | chr8_4:3911012-3911031 | Msa1307890:CDS | 40.0% | |
| ! | TGGTCTTGCATTTCGTACAA+AGG | - | chr8_4:3911080-3911099 | Msa1307890:CDS | 40.0% |
| TTCTCTGGCAAAAGAGTTGA+TGG | + | chr8_4:3911466-3911485 | None:intergenic | 40.0% | |
| !! | AACACCTTTGTAAAGTGTCG+AGG | + | chr8_4:3911507-3911526 | None:intergenic | 40.0% |
| TTGCATCATGTGTGAGTTTG+AGG | - | chr8_4:3911670-3911689 | Msa1307890:intron | 40.0% | |
| ! | ATGTTAACAAAGTGCCTCTG+GGG | - | chr8_4:3911878-3911897 | Msa1307890:intron | 40.0% |
| ACCGGCCGAAAAATTAGTTA+AGG | + | chr8_4:3912024-3912043 | None:intergenic | 40.0% | |
| TGTTTGTAGGCTTGTATGTC+AGG | - | chr8_4:3912101-3912120 | Msa1307890:intron | 40.0% | |
| CAAACCTCATTTGGATCAAC+CGG | + | chr8_4:3912303-3912322 | None:intergenic | 40.0% | |
| GTTGATCCAAATGAGGTTTG+TGG | - | chr8_4:3912303-3912322 | Msa1307890:CDS | 40.0% | |
| TTAGGACCACAAACCTCATT+TGG | + | chr8_4:3912312-3912331 | None:intergenic | 40.0% | |
| !! | TGTATTTTCTGGGAAGGTTG+AGG | - | chr8_4:3912386-3912405 | Msa1307890:CDS | 40.0% |
| TACAATTGTCAAGCAGCCTA+TGG | - | chr8_4:3912416-3912435 | Msa1307890:CDS | 40.0% | |
| CTCATAGTGCCAAAATCCAT+AGG | + | chr8_4:3912435-3912454 | None:intergenic | 40.0% | |
| !! | CTATGGATTTTGGCACTATG+AGG | - | chr8_4:3912433-3912452 | Msa1307890:CDS | 40.0% |
| !! | GCGATGAATTTTAATCCTCC+CGG | - | chr8_4:3912640-3912659 | Msa1307890:CDS | 40.0% |
| CGGTACCATATACTTCAAAC+AGG | - | chr8_4:3912660-3912679 | Msa1307890:CDS | 40.0% | |
| AATTTACAGGCCCGTGTTAT+AGG | - | chr8_4:3912772-3912791 | Msa1307890:intron | 40.0% | |
| TAGCCAACTCACCTATAACA+CGG | + | chr8_4:3912786-3912805 | None:intergenic | 40.0% | |
| AATGTGTCATGTTCTTCCCA+TGG | - | chr8_4:3912958-3912977 | Msa1307890:intron | 40.0% | |
| !!! | TTTTTGGCTAGACGTACCAT+GGG | + | chr8_4:3912977-3912996 | None:intergenic | 40.0% |
| !!! | TTTTTTGGCTAGACGTACCA+TGG | + | chr8_4:3912978-3912997 | None:intergenic | 40.0% |
| ! | GGTGTCATGAAAACTTGTCT+TGG | + | chr8_4:3913004-3913023 | None:intergenic | 40.0% |
| GTACATCTGTTGCAGTTGAT+AGG | - | chr8_4:3913460-3913479 | Msa1307890:intron | 40.0% | |
| ! | ATAGCTTGCAGGAGAAAAAG+CGG | + | chr8_4:3913805-3913824 | None:intergenic | 40.0% |
| ! | GACATCAACATATAGCTTGC+AGG | + | chr8_4:3913816-3913835 | None:intergenic | 40.0% |
| ! | CAAAAAGTCTAGGACGACAT+TGG | - | chr8_4:3914016-3914035 | Msa1307890:CDS | 40.0% |
| ATCAAGCCAAACTGTACCAT+TGG | - | chr8_4:3914301-3914320 | Msa1307890:intron | 40.0% | |
| GTCTTCATAAGATAGACTCC+TGG | - | chr8_4:3914363-3914382 | Msa1307890:intron | 40.0% | |
| TGCCGATGTATACAATGACC+AGG | - | chr8_4:3910906-3910925 | Msa1307890:CDS | 45.0% | |
| ! | ATACAATGACCAGGTTGAGG+TGG | - | chr8_4:3910915-3910934 | Msa1307890:CDS | 45.0% |
| ! | TACAATGACCAGGTTGAGGT+GGG | - | chr8_4:3910916-3910935 | Msa1307890:CDS | 45.0% |
| AACTAAAACCCACCTCAACC+TGG | + | chr8_4:3910927-3910946 | None:intergenic | 45.0% | |
| GTGTGGCAGGAAATTGCAAA+AGG | - | chr8_4:3911005-3911024 | Msa1307890:CDS | 45.0% | |
| TGGCAGGAAATTGCAAAAGG+TGG | - | chr8_4:3911008-3911027 | Msa1307890:CDS | 45.0% | |
| CAGGAAATTGCAAAAGGTGG+AGG | - | chr8_4:3911011-3911030 | Msa1307890:CDS | 45.0% | |
| TCTCACTGCGTCAACAAATC+AGG | - | chr8_4:3911137-3911156 | Msa1307890:CDS | 45.0% | |
| !!! | TTGATGGCGGTTTTGATGGT+TGG | + | chr8_4:3911450-3911469 | None:intergenic | 45.0% |
| !!! | AGAGTTGATGGCGGTTTTGA+TGG | + | chr8_4:3911454-3911473 | None:intergenic | 45.0% |
| !! | TCTGGCAAAAGAGTTGATGG+CGG | + | chr8_4:3911463-3911482 | None:intergenic | 45.0% |
| TGGTCCTCGACACTTTACAA+AGG | - | chr8_4:3911500-3911519 | Msa1307890:CDS | 45.0% | |
| TTCATTAACAAGTGCCCCAG+AGG | + | chr8_4:3911895-3911914 | None:intergenic | 45.0% | |
| GATCTCTTGGGGTTGTTTGT+AGG | - | chr8_4:3912088-3912107 | Msa1307890:intron | 45.0% | |
| ! | AATAGGTTGGACGAGTAGCT+TGG | - | chr8_4:3912141-3912160 | Msa1307890:intron | 45.0% |
| TGAACCGGTTGATCCAAATG+AGG | - | chr8_4:3912296-3912315 | Msa1307890:CDS | 45.0% | |
| ! | GTCAAGCAGCCTATGGATTT+TGG | - | chr8_4:3912423-3912442 | Msa1307890:CDS | 45.0% |
| ! | TTGAAGTATATGGTACCGGG+AGG | + | chr8_4:3912658-3912677 | None:intergenic | 45.0% |
| CACGGGCCTGTAAATTGATA+TGG | + | chr8_4:3912768-3912787 | None:intergenic | 45.0% | |
| AGCCAACTCACCTATAACAC+GGG | + | chr8_4:3912785-3912804 | None:intergenic | 45.0% | |
| TCAGAAACAAGGCAGCAAGT+GGG | - | chr8_4:3912859-3912878 | Msa1307890:CDS | 45.0% | |
| AGAGATGTAGAGGTTCAGAC+AGG | - | chr8_4:3913042-3913061 | Msa1307890:intron | 45.0% | |
| TAGAGGTTCAGACAGGTAAG+AGG | - | chr8_4:3913049-3913068 | Msa1307890:intron | 45.0% | |
| !! | TTGAAACTATTGGCTCGTCC+CGG | + | chr8_4:3913509-3913528 | None:intergenic | 45.0% |
| TGGAAGCCAATGGTACAGTT+TGG | + | chr8_4:3914310-3914329 | None:intergenic | 45.0% | |
| TGCAAAAGGTGGAGGGAGAA+AGG | - | chr8_4:3911019-3911038 | Msa1307890:CDS | 50.0% | |
| AAAAGGTGGAGGGAGAAAGG+AGG | - | chr8_4:3911022-3911041 | Msa1307890:CDS | 50.0% | |
| GTTGACGCAGTGAGATGTTG+AGG | + | chr8_4:3911132-3911151 | None:intergenic | 50.0% | |
| CTCAGAAACAAGGCAGCAAG+TGG | - | chr8_4:3912858-3912877 | Msa1307890:CDS | 50.0% | |
| GACGCAGTGAGATGTTGAGG+TGG | + | chr8_4:3911129-3911148 | None:intergenic | 55.0% | |
| GGCCCGTGTTATAGGTGAGT+TGG | - | chr8_4:3912780-3912799 | Msa1307890:intron | 55.0% | |
| CTTACTAAGAGCCAGGGTCG+CGG | + | chr8_4:3914134-3914153 | None:intergenic | 55.0% | |
| ACAAACTTCCACCGCGACCC+TGG | - | chr8_4:3914120-3914139 | Msa1307890:intron | 60.0% | |
| ACTAAGAGCCAGGGTCGCGG+TGG | + | chr8_4:3914131-3914150 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 3910905 | 3914406 | 3910905 | ID=Msa1307890;Name=Msa1307890 |
| chr8_4 | mRNA | 3910905 | 3914406 | 3910905 | ID=Msa1307890-mRNA-1;Parent=Msa1307890;Name=Msa1307890-mRNA-1;_AED=0.42;_eAED=0.48;_QI=0|0|0|0.7|1|1|10|0|544 |
| chr8_4 | exon | 3914384 | 3914406 | 3914384 | ID=Msa1307890-mRNA-1:exon:1161;Parent=Msa1307890-mRNA-1 |
| chr8_4 | exon | 3914153 | 3914297 | 3914153 | ID=Msa1307890-mRNA-1:exon:1160;Parent=Msa1307890-mRNA-1 |
| chr8_4 | exon | 3914009 | 3914048 | 3914009 | ID=Msa1307890-mRNA-1:exon:1159;Parent=Msa1307890-mRNA-1 |
| chr8_4 | exon | 3913790 | 3913871 | 3913790 | ID=Msa1307890-mRNA-1:exon:1158;Parent=Msa1307890-mRNA-1 |
| chr8_4 | exon | 3912994 | 3913039 | 3912994 | ID=Msa1307890-mRNA-1:exon:1157;Parent=Msa1307890-mRNA-1 |
| chr8_4 | exon | 3912811 | 3912909 | 3912811 | ID=Msa1307890-mRNA-1:exon:1156;Parent=Msa1307890-mRNA-1 |
| chr8_4 | exon | 3912630 | 3912698 | 3912630 | ID=Msa1307890-mRNA-1:exon:1155;Parent=Msa1307890-mRNA-1 |
| chr8_4 | exon | 3912248 | 3912530 | 3912248 | ID=Msa1307890-mRNA-1:exon:1154;Parent=Msa1307890-mRNA-1 |
| chr8_4 | exon | 3911748 | 3911872 | 3911748 | ID=Msa1307890-mRNA-1:exon:1153;Parent=Msa1307890-mRNA-1 |
| chr8_4 | exon | 3910905 | 3911627 | 3910905 | ID=Msa1307890-mRNA-1:exon:1152;Parent=Msa1307890-mRNA-1 |
| chr8_4 | CDS | 3914384 | 3914406 | 3914384 | ID=Msa1307890-mRNA-1:cds;Parent=Msa1307890-mRNA-1 |
| chr8_4 | CDS | 3914153 | 3914297 | 3914153 | ID=Msa1307890-mRNA-1:cds;Parent=Msa1307890-mRNA-1 |
| chr8_4 | CDS | 3914009 | 3914048 | 3914009 | ID=Msa1307890-mRNA-1:cds;Parent=Msa1307890-mRNA-1 |
| chr8_4 | CDS | 3913790 | 3913871 | 3913790 | ID=Msa1307890-mRNA-1:cds;Parent=Msa1307890-mRNA-1 |
| chr8_4 | CDS | 3912994 | 3913039 | 3912994 | ID=Msa1307890-mRNA-1:cds;Parent=Msa1307890-mRNA-1 |
| chr8_4 | CDS | 3912811 | 3912909 | 3912811 | ID=Msa1307890-mRNA-1:cds;Parent=Msa1307890-mRNA-1 |
| chr8_4 | CDS | 3912630 | 3912698 | 3912630 | ID=Msa1307890-mRNA-1:cds;Parent=Msa1307890-mRNA-1 |
| chr8_4 | CDS | 3912248 | 3912530 | 3912248 | ID=Msa1307890-mRNA-1:cds;Parent=Msa1307890-mRNA-1 |
| chr8_4 | CDS | 3911748 | 3911872 | 3911748 | ID=Msa1307890-mRNA-1:cds;Parent=Msa1307890-mRNA-1 |
| chr8_4 | CDS | 3910905 | 3911627 | 3910905 | ID=Msa1307890-mRNA-1:cds;Parent=Msa1307890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
