Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366040 | XP_027191243.1 | 88.832 | 197 | 2 | 1 | 1 | 177 | 1 | 197 | 8.66e-118 | 351 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366040 | sp|O98679|NDHK_PEA | 100.000 | 153 | 0 | 0 | 1 | 153 | 1 | 153 | 2.13e-109 | 321 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366040 | A0A3Q7XTE2 | 88.832 | 197 | 2 | 1 | 1 | 177 | 1 | 197 | 4.14e-118 | 351 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016830 | Msa1366040 | 0.810974 | 8.828162e-51 | -8.615850e-47 |
| Msa0028410 | Msa1366040 | 0.816074 | 6.668284e-52 | -8.615850e-47 |
| Msa0030710 | Msa1366040 | 0.810580 | 1.073925e-50 | -8.615850e-47 |
| Msa0092750 | Msa1366040 | 0.802584 | 5.235028e-49 | -8.615850e-47 |
| Msa0095170 | Msa1366040 | 0.828712 | 7.720158e-55 | -8.615850e-47 |
| Msa0095190 | Msa1366040 | 0.852100 | 5.760000e-61 | -8.615850e-47 |
| Msa0095210 | Msa1366040 | 0.810580 | 1.073880e-50 | -8.615850e-47 |
| Msa0095290 | Msa1366040 | 0.840929 | 6.465022e-58 | -8.615850e-47 |
| Msa0102290 | Msa1366040 | 0.812534 | 4.039797e-51 | -8.615850e-47 |
| Msa1354320 | Msa1366040 | 0.847516 | 1.100848e-59 | -8.615850e-47 |
| Msa1354330 | Msa1366040 | 0.807586 | 4.700982e-50 | -8.615850e-47 |
| Msa1354340 | Msa1366040 | 0.810508 | 1.113018e-50 | -8.615850e-47 |
| Msa1354350 | Msa1366040 | 0.840687 | 7.484254e-58 | -8.615850e-47 |
| Msa1354380 | Msa1366040 | 0.854966 | 8.655113e-62 | -8.615850e-47 |
| Msa1354390 | Msa1366040 | 0.841290 | 5.196532e-58 | -8.615850e-47 |
| Msa1354880 | Msa1366040 | 0.830746 | 2.468230e-55 | -8.615850e-47 |
| Msa1354900 | Msa1366040 | 0.849043 | 4.165522e-60 | -8.615850e-47 |
| Msa1354910 | Msa1366040 | 0.826676 | 2.380716e-54 | -8.615850e-47 |
| Msa1354920 | Msa1366040 | 0.804762 | 1.848509e-49 | -8.615850e-47 |
| Msa1354930 | Msa1366040 | 0.860771 | 1.636646e-63 | -8.615850e-47 |
| Msa1354950 | Msa1366040 | 0.830345 | 3.095293e-55 | -8.615850e-47 |
| Msa1355050 | Msa1366040 | 0.851999 | 6.152428e-61 | -8.615850e-47 |
| Msa1355070 | Msa1366040 | 0.853368 | 2.503026e-61 | -8.615850e-47 |
| Msa1355080 | Msa1366040 | 0.838225 | 3.262330e-57 | -8.615850e-47 |
| Msa1355090 | Msa1366040 | 0.807233 | 5.586275e-50 | -8.615850e-47 |
| Msa1355100 | Msa1366040 | 0.848031 | 7.940283e-60 | -8.615850e-47 |
| Msa1365960 | Msa1366040 | 0.805460 | 1.320545e-49 | -8.615850e-47 |
| Msa1366000 | Msa1366040 | 0.812895 | 3.368414e-51 | -8.615850e-47 |
| Msa1366010 | Msa1366040 | 0.827522 | 1.493550e-54 | -8.615850e-47 |
| Msa1366040 | Msa1366050 | 0.849454 | 3.200101e-60 | -8.615850e-47 |
| Msa1366040 | Msa1368270 | 0.821430 | 4.054144e-53 | -8.615850e-47 |
| Msa1366040 | Msa1368280 | 0.824715 | 6.946598e-54 | -8.615850e-47 |
| Msa1366040 | Msa1368290 | 0.840140 | 1.039951e-57 | -8.615850e-47 |
| Msa1366040 | Msa1368300 | 0.812668 | 3.775931e-51 | -8.615850e-47 |
| Msa1366040 | Msa1368310 | 0.825075 | 5.711454e-54 | -8.615850e-47 |
| Msa1366040 | Msa1374610 | 0.811718 | 6.084835e-51 | -8.615850e-47 |
| Msa1366040 | Msa1380570 | 0.815169 | 1.061114e-51 | -8.615850e-47 |
| Msa1366040 | Msa1380590 | 0.841117 | 5.771441e-58 | -8.615850e-47 |
| Msa1366040 | Msa1380600 | 0.854961 | 8.681758e-62 | -8.615850e-47 |
| Msa1366040 | Msa1380610 | 0.817447 | 3.281714e-52 | -8.615850e-47 |
| Msa1366040 | Msa1380620 | 0.843442 | 1.397764e-58 | -8.615850e-47 |
| Msa1366040 | Msa1380640 | 0.848025 | 7.969705e-60 | -8.615850e-47 |
| Msa1366040 | Msa1380680 | 0.814558 | 1.449572e-51 | -8.615850e-47 |
| Msa1366040 | Msa1380690 | 0.803583 | 3.253271e-49 | -8.615850e-47 |
| Msa1366040 | Msa1380710 | 0.824410 | 8.195195e-54 | -8.615850e-47 |
| Msa1366040 | Msa1391160 | 0.807198 | 5.683393e-50 | -8.615850e-47 |
| Msa1366040 | Msa1394030 | 0.815862 | 7.437152e-52 | -8.615850e-47 |
| Msa1366040 | Msa1394040 | 0.852296 | 5.067507e-61 | -8.615850e-47 |
| Msa1366040 | Msa1394060 | 0.860972 | 1.422823e-63 | -8.615850e-47 |
| Msa1366040 | Msa1394130 | 0.817646 | 2.960880e-52 | -8.615850e-47 |
| Msa1366040 | Msa1394150 | 0.862046 | 6.686996e-64 | -8.615850e-47 |
| Msa1366040 | Msa1394160 | 0.829166 | 5.993735e-55 | -8.615850e-47 |
| Msa1366040 | Msa1394170 | 0.816595 | 5.100981e-52 | -8.615850e-47 |
| Msa1366040 | Msa1394210 | 0.819108 | 1.380678e-52 | -8.615850e-47 |
| Msa1366040 | Msa1394220 | 0.845698 | 3.453642e-59 | -8.615850e-47 |
| Msa1366040 | Msa1394230 | 0.866602 | 2.529255e-65 | -8.615850e-47 |
| Msa1366040 | Msa1394250 | 0.834764 | 2.482080e-56 | -8.615850e-47 |
| Msa1366040 | Msa1398700 | 0.830217 | 3.325712e-55 | -8.615850e-47 |
| Msa1366040 | Msa1398720 | 0.844519 | 7.191454e-59 | -8.615850e-47 |
| Msa0624260 | Msa1366040 | 0.810974 | 8.825753e-51 | -8.615850e-47 |
| Msa0624360 | Msa1366040 | 0.807609 | 4.649912e-50 | -8.615850e-47 |
| Msa0694810 | Msa1366040 | 0.804225 | 2.392021e-49 | -8.615850e-47 |
| Msa0708120 | Msa1366040 | 0.809796 | 1.585201e-50 | -8.615850e-47 |
| Msa0727020 | Msa1366040 | 0.817236 | 3.660993e-52 | -8.615850e-47 |
| Msa0729120 | Msa1366040 | 0.801447 | 8.964762e-49 | -8.615850e-47 |
| Msa0807840 | Msa1366040 | 0.814086 | 1.843122e-51 | -8.615850e-47 |
| Msa0811710 | Msa1366040 | 0.809397 | 1.930468e-50 | -8.615850e-47 |
| Msa0124070 | Msa1366040 | 0.820892 | 5.394307e-53 | -8.615850e-47 |
| Msa0139800 | Msa1366040 | 0.814119 | 1.812139e-51 | -8.615850e-47 |
| Msa0139810 | Msa1366040 | 0.815490 | 8.999242e-52 | -8.615850e-47 |
| Msa0141090 | Msa1366040 | 0.814132 | 1.799908e-51 | -8.615850e-47 |
| Msa0147070 | Msa1366040 | 0.802160 | 6.401109e-49 | -8.615850e-47 |
| Msa0170550 | Msa1366040 | 0.811770 | 5.930327e-51 | -8.615850e-47 |
| Msa0173880 | Msa1366040 | 0.836392 | 9.612333e-57 | -8.615850e-47 |
| Msa0186750 | Msa1366040 | 0.829739 | 4.349573e-55 | -8.615850e-47 |
| Msa0202640 | Msa1366040 | 0.823904 | 1.077308e-53 | -8.615850e-47 |
| Msa0221840 | Msa1366040 | 0.803599 | 3.227530e-49 | -8.615850e-47 |
| Msa0225050 | Msa1366040 | 0.805786 | 1.128433e-49 | -8.615850e-47 |
| Msa0231180 | Msa1366040 | 0.807054 | 6.095584e-50 | -8.615850e-47 |
| Msa1263600 | Msa1366040 | 0.801856 | 7.389426e-49 | -8.615850e-47 |
| Msa1267800 | Msa1366040 | 0.808869 | 2.504885e-50 | -8.615850e-47 |
| Msa1269400 | Msa1366040 | 0.826404 | 2.764596e-54 | -8.615850e-47 |
| Msa1269420 | Msa1366040 | 0.844584 | 6.905565e-59 | -8.615850e-47 |
| Msa1292700 | Msa1366040 | 0.811503 | 6.776100e-51 | -8.615850e-47 |
| Msa1305090 | Msa1366040 | 0.849330 | 3.465113e-60 | -8.615850e-47 |
| Msa1317340 | Msa1366040 | 0.810034 | 1.409007e-50 | -8.615850e-47 |
| Msa0370210 | Msa1366040 | 0.827138 | 1.846222e-54 | -8.615850e-47 |
| Msa0374840 | Msa1366040 | 0.812455 | 4.202961e-51 | -8.615850e-47 |
| Msa0375100 | Msa1366040 | 0.815318 | 9.830394e-52 | -8.615850e-47 |
| Msa0398630 | Msa1366040 | 0.829689 | 4.471935e-55 | -8.615850e-47 |
| Msa0404530 | Msa1366040 | 0.805690 | 1.181699e-49 | -8.615850e-47 |
| Msa0426890 | Msa1366040 | 0.807037 | 6.147563e-50 | -8.615850e-47 |
| Msa0449920 | Msa1366040 | 0.829230 | 5.781717e-55 | -8.615850e-47 |
| Msa0983700 | Msa1366040 | 0.847108 | 1.424857e-59 | -8.615850e-47 |
| Msa0983720 | Msa1366040 | 0.836680 | 8.119693e-57 | -8.615850e-47 |
| Msa1064410 | Msa1366040 | 0.801059 | 1.076343e-48 | -8.615850e-47 |
| Msa1081950 | Msa1366040 | 0.803811 | 2.916703e-49 | -8.615850e-47 |
| Msa1086050 | Msa1366040 | 0.823677 | 1.217946e-53 | -8.615850e-47 |
| Msa1086070 | Msa1366040 | 0.869683 | 2.577552e-66 | -8.615850e-47 |
| Msa1086080 | Msa1366040 | 0.832629 | 8.477413e-56 | -8.615850e-47 |
| Msa1086090 | Msa1366040 | 0.822425 | 2.385672e-53 | -8.615850e-47 |
| Msa1086100 | Msa1366040 | 0.868755 | 5.156294e-66 | -8.615850e-47 |
| Msa1086140 | Msa1366040 | 0.861219 | 1.196534e-63 | -8.615850e-47 |
| Msa1086150 | Msa1366040 | 0.854528 | 1.158912e-61 | -8.615850e-47 |
| Msa1086180 | Msa1366040 | 0.858559 | 7.579440e-63 | -8.615850e-47 |
| Msa1086190 | Msa1366040 | 0.846365 | 2.273308e-59 | -8.615850e-47 |
| Msa1086200 | Msa1366040 | 0.811126 | 8.179925e-51 | -8.615850e-47 |
| Msa1086210 | Msa1366040 | 0.861546 | 9.508153e-64 | -8.615850e-47 |
| Msa1086250 | Msa1366040 | 0.835568 | 1.555666e-56 | -8.615850e-47 |
| Msa1086260 | Msa1366040 | 0.829263 | 5.675958e-55 | -8.615850e-47 |
| Msa1086270 | Msa1366040 | 0.853371 | 2.498234e-61 | -8.615850e-47 |
| Msa1086280 | Msa1366040 | 0.873083 | 1.935041e-67 | -8.615850e-47 |
| Msa1086300 | Msa1366040 | 0.825215 | 5.293441e-54 | -8.615850e-47 |
| Msa1086360 | Msa1366040 | 0.847304 | 1.258911e-59 | -8.615850e-47 |
| Msa1086380 | Msa1366040 | 0.869766 | 2.421668e-66 | -8.615850e-47 |
| Msa1086430 | Msa1366040 | 0.842044 | 3.288549e-58 | -8.615850e-47 |
| Msa1086450 | Msa1366040 | 0.868616 | 5.718863e-66 | -8.615850e-47 |
| Msa1086470 | Msa1366040 | 0.866516 | 2.692777e-65 | -8.615850e-47 |
| Msa1086660 | Msa1366040 | 0.855724 | 5.205260e-62 | -8.615850e-47 |
| Msa1086860 | Msa1366040 | 0.851236 | 1.012036e-60 | -8.615850e-47 |
| Msa1086880 | Msa1366040 | 0.850211 | 1.966364e-60 | -8.615850e-47 |
| Msa1086890 | Msa1366040 | 0.830330 | 3.121485e-55 | -8.615850e-47 |
| Msa1086900 | Msa1366040 | 0.807238 | 5.574242e-50 | -8.615850e-47 |
| Msa1086910 | Msa1366040 | 0.858828 | 6.299403e-63 | -8.615850e-47 |
| Msa0268170 | Msa1366040 | 0.871858 | 4.959812e-67 | -8.615850e-47 |
| Msa0268190 | Msa1366040 | 0.820635 | 6.182247e-53 | -8.615850e-47 |
| Msa0268370 | Msa1366040 | 0.838318 | 3.088167e-57 | -8.615850e-47 |
| Msa0268390 | Msa1366040 | 0.859644 | 3.585453e-63 | -8.615850e-47 |
| Msa0268400 | Msa1366040 | 0.852085 | 5.818026e-61 | -8.615850e-47 |
| Msa0268410 | Msa1366040 | 0.862811 | 3.889281e-64 | -8.615850e-47 |
| Msa0268430 | Msa1366040 | 0.823423 | 1.395979e-53 | -8.615850e-47 |
| Msa0268530 | Msa1366040 | 0.836675 | 8.141313e-57 | -8.615850e-47 |
| Msa0268550 | Msa1366040 | 0.850434 | 1.702011e-60 | -8.615850e-47 |
| Msa0268560 | Msa1366040 | 0.845581 | 3.714431e-59 | -8.615850e-47 |
| Msa0268570 | Msa1366040 | 0.820018 | 8.561456e-53 | -8.615850e-47 |
| Msa0268580 | Msa1366040 | 0.846180 | 2.554286e-59 | -8.615850e-47 |
| Msa0268630 | Msa1366040 | 0.848448 | 6.090244e-60 | -8.615850e-47 |
| Msa0268640 | Msa1366040 | 0.863179 | 2.994810e-64 | -8.615850e-47 |
| Msa0268720 | Msa1366040 | 0.862836 | 3.821751e-64 | -8.615850e-47 |
| Msa0268740 | Msa1366040 | 0.861199 | 1.213608e-63 | -8.615850e-47 |
| Msa0268750 | Msa1366040 | 0.819098 | 1.388238e-52 | -8.615850e-47 |
| Msa0268760 | Msa1366040 | 0.826802 | 2.220595e-54 | -8.615850e-47 |
| Msa0268830 | Msa1366040 | 0.842585 | 2.364129e-58 | -8.615850e-47 |
| Msa0268840 | Msa1366040 | 0.850318 | 1.834931e-60 | -8.615850e-47 |
| Msa0268860 | Msa1366040 | 0.838391 | 2.957599e-57 | -8.615850e-47 |
| Msa0268920 | Msa1366040 | 0.845992 | 2.872499e-59 | -8.615850e-47 |
| Msa0268940 | Msa1366040 | 0.852770 | 3.711245e-61 | -8.615850e-47 |
| Msa0268950 | Msa1366040 | 0.846244 | 2.452984e-59 | -8.615850e-47 |
| Msa0268960 | Msa1366040 | 0.808652 | 2.787995e-50 | -8.615850e-47 |
| Msa0268990 | Msa1366040 | 0.806087 | 9.751897e-50 | -8.615850e-47 |
| Msa0269040 | Msa1366040 | 0.831211 | 1.898745e-55 | -8.615850e-47 |
| Msa0269050 | Msa1366040 | 0.859403 | 4.237675e-63 | -8.615850e-47 |
| Msa0269070 | Msa1366040 | 0.827680 | 1.368819e-54 | -8.615850e-47 |
| Msa0296100 | Msa1366040 | 0.804929 | 1.705668e-49 | -8.615850e-47 |
| Msa0307490 | Msa1366040 | 0.802863 | 4.584789e-49 | -8.615850e-47 |
| Msa0344180 | Msa1366040 | 0.832590 | 8.667932e-56 | -8.615850e-47 |
| Msa0344190 | Msa1366040 | 0.875436 | 3.086541e-68 | -8.615850e-47 |
| Msa0344210 | Msa1366040 | 0.812285 | 4.579034e-51 | -8.615850e-47 |
| Msa0344280 | Msa1366040 | 0.821995 | 3.001648e-53 | -8.615850e-47 |
| Msa0344300 | Msa1366040 | 0.861784 | 8.040656e-64 | -8.615850e-47 |
| Msa0344310 | Msa1366040 | 0.825958 | 3.528460e-54 | -8.615850e-47 |
| Msa1143120 | Msa1366040 | 0.834672 | 2.618126e-56 | -8.615850e-47 |
| Msa1143130 | Msa1366040 | 0.856640 | 2.806264e-62 | -8.615850e-47 |
| Msa1143160 | Msa1366040 | 0.850344 | 1.804660e-60 | -8.615850e-47 |
| Msa1143170 | Msa1366040 | 0.813653 | 2.295695e-51 | -8.615850e-47 |
| Msa1143180 | Msa1366040 | 0.832494 | 9.153738e-56 | -8.615850e-47 |
| Msa1182960 | Msa1366040 | 0.807734 | 4.372690e-50 | -8.615850e-47 |
| Msa1190300 | Msa1366040 | 0.807486 | 4.937393e-50 | -8.615850e-47 |
| Msa1199690 | Msa1366040 | 0.809885 | 1.516400e-50 | -8.615850e-47 |
| Msa0483990 | Msa1366040 | 0.810693 | 1.015485e-50 | -8.615850e-47 |
| Msa0495270 | Msa1366040 | 0.841663 | 4.145986e-58 | -8.615850e-47 |
| Msa0508620 | Msa1366040 | 0.802425 | 5.645695e-49 | -8.615850e-47 |
| Msa0508660 | Msa1366040 | 0.801390 | 9.208310e-49 | -8.615850e-47 |
| Msa0562040 | Msa1366040 | 0.815755 | 7.859102e-52 | -8.615850e-47 |
| Msa0571220 | Msa1366040 | 0.811042 | 8.533873e-51 | -8.615850e-47 |
| Msa0577140 | Msa1366040 | 0.801748 | 7.778700e-49 | -8.615850e-47 |
| Msa0577910 | Msa1366040 | 0.810969 | 8.846970e-51 | -8.615850e-47 |
| Msa0582510 | Msa1366040 | 0.841866 | 3.663769e-58 | -8.615850e-47 |
| Msa0582520 | Msa1366040 | 0.853245 | 2.713691e-61 | -8.615850e-47 |
| Msa0582540 | Msa1366040 | 0.840002 | 1.130093e-57 | -8.615850e-47 |
| Msa0582610 | Msa1366040 | 0.831416 | 1.690476e-55 | -8.615850e-47 |
| Msa0582630 | Msa1366040 | 0.850428 | 1.708972e-60 | -8.615850e-47 |
| Msa0582640 | Msa1366040 | 0.839626 | 1.415839e-57 | -8.615850e-47 |
| Msa0582650 | Msa1366040 | 0.826164 | 3.151595e-54 | -8.615850e-47 |
| Msa0582660 | Msa1366040 | 0.853378 | 2.486510e-61 | -8.615850e-47 |
| Msa0582690 | Msa1366040 | 0.839642 | 1.402118e-57 | -8.615850e-47 |
| Msa0582700 | Msa1366040 | 0.877875 | 4.422605e-69 | -8.615850e-47 |
| Msa0582720 | Msa1366040 | 0.833822 | 4.277310e-56 | -8.615850e-47 |
| Msa0582730 | Msa1366040 | 0.808202 | 3.478096e-50 | -8.615850e-47 |
| Msa0582750 | Msa1366040 | 0.861272 | 1.152835e-63 | -8.615850e-47 |
| Msa0582760 | Msa1366040 | 0.837169 | 6.092418e-57 | -8.615850e-47 |
| Msa0582770 | Msa1366040 | 0.802930 | 4.441105e-49 | -8.615850e-47 |
| Msa0582780 | Msa1366040 | 0.864343 | 1.301608e-64 | -8.615850e-47 |
| Msa0582810 | Msa1366040 | 0.836920 | 7.052996e-57 | -8.615850e-47 |
| Msa0582820 | Msa1366040 | 0.852510 | 4.402539e-61 | -8.615850e-47 |
| Msa0582840 | Msa1366040 | 0.828266 | 9.892311e-55 | -8.615850e-47 |
| Msa0582890 | Msa1366040 | 0.830083 | 3.586012e-55 | -8.615850e-47 |
| Msa0582910 | Msa1366040 | 0.853665 | 2.056855e-61 | -8.615850e-47 |
| Msa0582920 | Msa1366040 | 0.812648 | 3.814384e-51 | -8.615850e-47 |
| Msa0582930 | Msa1366040 | 0.839431 | 1.590728e-57 | -8.615850e-47 |
| Msa0591370 | Msa1366040 | 0.832488 | 9.188409e-56 | -8.615850e-47 |
| Msa0591380 | Msa1366040 | 0.827705 | 1.349995e-54 | -8.615850e-47 |
| Msa0867640 | Msa1366040 | 0.826400 | 2.770238e-54 | -8.615850e-47 |
| Msa0883880 | Msa1366040 | 0.817737 | 2.823499e-52 | -8.615850e-47 |
| Msa0924850 | Msa1366040 | 0.815224 | 1.031478e-51 | -8.615850e-47 |
| Msa0924870 | Msa1366040 | 0.842728 | 2.166214e-58 | -8.615850e-47 |
| Msa0924880 | Msa1366040 | 0.801447 | 8.964882e-49 | -8.615850e-47 |
| Msa0924890 | Msa1366040 | 0.822735 | 2.020358e-53 | -8.615850e-47 |
| Msa0924990 | Msa1366040 | 0.844790 | 6.076021e-59 | -8.615850e-47 |
| Msa0925040 | Msa1366040 | 0.861400 | 1.053314e-63 | -8.615850e-47 |
| Msa0931070 | Msa1366040 | 0.848062 | 7.787885e-60 | -8.615850e-47 |
| Msa0931080 | Msa1366040 | 0.865250 | 6.768273e-65 | -8.615850e-47 |
| Msa0931100 | Msa1366040 | 0.833694 | 4.602667e-56 | -8.615850e-47 |
| Msa0931110 | Msa1366040 | 0.800873 | 1.174883e-48 | -8.615850e-47 |
| Msa0931130 | Msa1366040 | 0.850014 | 2.232758e-60 | -8.615850e-47 |
| Msa0931140 | Msa1366040 | 0.854277 | 1.369947e-61 | -8.615850e-47 |
| Msa0931160 | Msa1366040 | 0.834370 | 3.117965e-56 | -8.615850e-47 |
| Msa0931190 | Msa1366040 | 0.826659 | 2.403370e-54 | -8.615850e-47 |
| Msa0931210 | Msa1366040 | 0.868383 | 6.799408e-66 | -8.615850e-47 |
| Msa0931220 | Msa1366040 | 0.820007 | 8.611184e-53 | -8.615850e-47 |
| Msa0931230 | Msa1366040 | 0.828390 | 9.233298e-55 | -8.615850e-47 |
| Msa0931240 | Msa1366040 | 0.847505 | 1.108426e-59 | -8.615850e-47 |
| Msa0931260 | Msa1366040 | 0.843585 | 1.280132e-58 | -8.615850e-47 |
| Msa0931270 | Msa1366040 | 0.857353 | 1.729048e-62 | -8.615850e-47 |
| Msa0940400 | Msa1366040 | 0.809456 | 1.875387e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366040 | MtrunA17_CPg0493361 | 100.000 | 153 | 0 | 0 | 1 | 153 | 1 | 153 | 5.40e-110 | 319 |
| Msa1366040 | MtrunA17_Chr4g0016411 | 100.000 | 153 | 0 | 0 | 1 | 153 | 1 | 153 | 5.40e-110 | 319 |
| Msa1366040 | MtrunA17_Chr7g0229341 | 99.346 | 153 | 1 | 0 | 1 | 153 | 1 | 153 | 5.77e-109 | 317 |
| Msa1366040 | MtrunA17_Chr7g0222091 | 85.621 | 153 | 0 | 1 | 1 | 153 | 1 | 131 | 5.69e-88 | 263 |
| Msa1366040 | MtrunA17_Chr7g0227431 | 87.069 | 116 | 12 | 2 | 1 | 114 | 1 | 115 | 9.52e-65 | 200 |
| Msa1366040 | MtrunA17_Chr3g0135651 | 47.183 | 142 | 73 | 2 | 12 | 153 | 55 | 194 | 4.22e-47 | 158 |
| Msa1366040 | MtrunA17_Chr4g0015251 | 100.000 | 71 | 0 | 0 | 83 | 153 | 1 | 71 | 5.22e-45 | 150 |
| Msa1366040 | MtrunA17_Chr4g0015291 | 93.443 | 61 | 4 | 0 | 209 | 269 | 16 | 76 | 3.35e-30 | 112 |
| Msa1366040 | MtrunA17_Chr7g0229301 | 93.443 | 61 | 4 | 0 | 209 | 269 | 16 | 76 | 1.12e-29 | 112 |
| Msa1366040 | MtrunA17_Chr6g0454441 | 93.443 | 61 | 4 | 0 | 209 | 269 | 16 | 76 | 1.12e-29 | 112 |
| Msa1366040 | MtrunA17_Chr4g0016451 | 93.443 | 61 | 4 | 0 | 209 | 269 | 16 | 76 | 1.12e-29 | 112 |
| Msa1366040 | MtrunA17_Chr6g0466281 | 93.443 | 61 | 4 | 0 | 209 | 269 | 16 | 76 | 1.12e-29 | 112 |
| Msa1366040 | MtrunA17_CPg0493311 | 93.443 | 61 | 4 | 0 | 209 | 269 | 16 | 76 | 1.12e-29 | 112 |
| Msa1366040 | MtrunA17_Chr7g0229661 | 90.000 | 60 | 6 | 0 | 210 | 269 | 17 | 76 | 2.28e-26 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366040 | ATCG00430.1 | 97.386 | 153 | 4 | 0 | 1 | 153 | 1 | 153 | 3.36e-107 | 313 |
| Msa1366040 | AT5G11770.1 | 47.887 | 142 | 72 | 2 | 12 | 153 | 63 | 202 | 4.46e-47 | 159 |
| Msa1366040 | ATCG00380.1 | 88.525 | 61 | 7 | 0 | 209 | 269 | 16 | 76 | 6.71e-28 | 108 |
Find 66 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCATAGCAATAACATATTT+TGG | 0.145578 | tig0018442:-185586 | None:intergenic |
| ATTGAATTTGCTTCATTAAT+AGG | 0.171112 | tig0018442:+185427 | Msa1366040:CDS |
| GGTCAAGACTATCCAGTTTA+TGG | 0.199215 | tig0018442:+185374 | Msa1366040:CDS |
| TCTATAACGGCTTCCGGTTT+AGG | 0.271031 | tig0018442:-185712 | None:intergenic |
| CGATTTGACTTTGATCGTTA+TGG | 0.283491 | tig0018442:+185454 | Msa1366040:CDS |
| CATTAAATGATCTTTCAAAT+TGG | 0.329344 | tig0018442:+185353 | Msa1366040:CDS |
| AGTTTATGGCCACTTCTCTA+TGG | 0.329903 | tig0018442:+185388 | Msa1366040:CDS |
| CGATTCTTATAGTACTGTTC+GGG | 0.334412 | tig0018442:+185642 | Msa1366040:CDS |
| GAAAATCTCACGTACGGTTC+TGG | 0.341218 | tig0018442:+191390 | Msa1366040:CDS |
| GGGCACCGTAACTATGAAAA+TGG | 0.352067 | tig0018442:+185525 | Msa1366040:CDS |
| ATAGAGAAGTGGCCATAAAC+TGG | 0.377990 | tig0018442:-185386 | None:intergenic |
| ATGGGAGCCTGTACAATTAC+AGG | 0.381263 | tig0018442:+185604 | Msa1366040:CDS |
| ATAGCATCTATAACGGCTTC+CGG | 0.383241 | tig0018442:-185718 | None:intergenic |
| GCCAGGCTGTCCACCTAAAC+CGG | 0.419334 | tig0018442:+185699 | Msa1366040:CDS |
| CCGATTCTTATAGTACTGTT+CGG | 0.421214 | tig0018442:+185641 | Msa1366040:CDS |
| ACCAAAATATGTTATTGCTA+TGG | 0.431305 | tig0018442:+185585 | Msa1366040:CDS |
| CGGAAAGAAGGATTTGGCTC+AGG | 0.436850 | tig0018442:+187756 | Msa1366040:intron |
| CGGTGCCCGCTGTTAAAATA+AGG | 0.440981 | tig0018442:-185510 | None:intergenic |
| CCTACTCCACTAGTACCAAT+AGG | 0.448651 | tig0018442:+190979 | Msa1366040:CDS |
| TTATAGTACTGTTCGGGGCG+TGG | 0.449303 | tig0018442:+185648 | Msa1366040:CDS |
| CCAAAATATGTTATTGCTAT+GGG | 0.459012 | tig0018442:+185586 | Msa1366040:CDS |
| CCTGTGGATGTCTATTTGCC+AGG | 0.459278 | tig0018442:+185682 | Msa1366040:CDS |
| TACCAGGACTAACTAGTAAA+CGG | 0.463029 | tig0018442:+189564 | Msa1366040:CDS |
| TGGTACCACGGTCGAGTCCT+AGG | 0.471525 | tig0018442:+185479 | Msa1366040:CDS |
| CATCCGTTACGGTCGTCATT+CGG | 0.486830 | tig0018442:-191429 | None:intergenic |
| TCCGGTTTAGGTGGACAGCC+TGG | 0.487255 | tig0018442:-185700 | None:intergenic |
| CTAGTACCAATAGGCGGCAT+GGG | 0.489607 | tig0018442:+190988 | Msa1366040:CDS |
| ATCAAGTAAGGGAAACTCAA+TGG | 0.496422 | tig0018442:-185299 | None:intergenic |
| AGATTGAGCGACATCCGTTA+CGG | 0.501255 | tig0018442:-191440 | None:intergenic |
| AAGCTTTACAGAATTATATG+AGG | 0.506312 | tig0018442:+191478 | Msa1366040:CDS |
| ACGTCGTCTGGGGCTTTACC+AGG | 0.507945 | tig0018442:+189548 | Msa1366040:CDS |
| CTAAGTTCGCTTCCAACTGT+AGG | 0.508663 | tig0018442:-189587 | None:intergenic |
| ATCGTTATGGACTGGTACCA+CGG | 0.509662 | tig0018442:+185467 | Msa1366040:CDS |
| ACCACGGTCGAGTCCTAGGC+AGG | 0.510388 | tig0018442:+185483 | Msa1366040:CDS |
| GGGGAAGAAGCACTACGCTT+AGG | 0.514502 | tig0018442:+191009 | Msa1366040:CDS |
| TGACTTTGATCGTTATGGAC+TGG | 0.515277 | tig0018442:+185459 | Msa1366040:CDS |
| TCATATAATCGAACTAAAGA+AGG | 0.525955 | tig0018442:-185550 | None:intergenic |
| CATCCCTCCTGTAATTGTAC+AGG | 0.526031 | tig0018442:-185611 | None:intergenic |
| GGCCGTTTACTAGTTAGTCC+TGG | 0.527000 | tig0018442:-189566 | None:intergenic |
| ACGGATGTCGCTCAATCTGA+AGG | 0.536147 | tig0018442:+191445 | Msa1366040:CDS |
| CCGAACAGTACTATAAGAAT+CGG | 0.541435 | tig0018442:-185641 | None:intergenic |
| AAAATAAGGTCTGCCTGCCT+AGG | 0.543654 | tig0018442:-185496 | None:intergenic |
| CCTATTGGTACTAGTGGAGT+AGG | 0.548713 | tig0018442:-190979 | None:intergenic |
| ACACTAGCTAATAGTCCTCC+TGG | 0.563367 | tig0018442:-186264 | None:intergenic |
| ACTAGTAAACGGCCTACAGT+TGG | 0.568372 | tig0018442:+189575 | Msa1366040:CDS |
| GAACCGAATGACGACCGTAA+CGG | 0.571218 | tig0018442:+191426 | Msa1366040:CDS |
| ATAACGGCTTCCGGTTTAGG+TGG | 0.571411 | tig0018442:-185709 | None:intergenic |
| ATGCCGCCTATTGGTACTAG+TGG | 0.577135 | tig0018442:-190985 | None:intergenic |
| CTTTCAAATTCAGAGAACCC+TGG | 0.581170 | tig0018442:-187796 | None:intergenic |
| ACTAGTACCAATAGGCGGCA+TGG | 0.586287 | tig0018442:+190987 | Msa1366040:CDS |
| CCTGGCAAATAGACATCCAC+AGG | 0.589717 | tig0018442:-185682 | None:intergenic |
| TCTCACGTACGGTTCTGGAA+CGG | 0.613778 | tig0018442:+191395 | Msa1366040:CDS |
| TAGTTTAGATCAACCCGAAG+AGG | 0.615869 | tig0018442:+186311 | Msa1366040:CDS |
| CGTGGATAAGCTAATTCCTG+TGG | 0.619980 | tig0018442:+185666 | Msa1366040:CDS |
| TGAGATGAAAATCTCACGTA+CGG | 0.620113 | tig0018442:+191384 | Msa1366040:CDS |
| CAACTAGTACCATAGAGAAG+TGG | 0.630979 | tig0018442:-185397 | None:intergenic |
| TCGTATCGCTGAAAAGCGAA+AGG | 0.642027 | tig0018442:+189718 | Msa1366040:CDS |
| TAGTACCAATAGGCGGCATG+GGG | 0.642307 | tig0018442:+190989 | Msa1366040:CDS |
| GGAGCCTGTACAATTACAGG+AGG | 0.664070 | tig0018442:+185607 | Msa1366040:CDS |
| CTCAATCTGAAGGAAATATG+CGG | 0.678212 | tig0018442:+191455 | Msa1366040:CDS |
| GATTCTTATAGTACTGTTCG+GGG | 0.694011 | tig0018442:+185643 | Msa1366040:CDS |
| GCCTATGATGTAGCACCAGG+AGG | 0.695694 | tig0018442:+186249 | Msa1366040:intron |
| GAGCCTGTACAATTACAGGA+GGG | 0.718983 | tig0018442:+185608 | Msa1366040:CDS |
| GCCTGCCTAGGACTCGACCG+TGG | 0.731891 | tig0018442:-185484 | None:intergenic |
| ACTCCACTAGTACCAATAGG+CGG | 0.735928 | tig0018442:+190982 | Msa1366040:CDS |
| AGTACCAATAGGCGGCATGG+GGG | 0.777855 | tig0018442:+190990 | Msa1366040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAAGACAATAATAT+AGG | + | tig0018442:186711-186730 | Msa1366040:intron | 10.0% |
| !! | ATAAAAAAGACAATAATATA+GGG | + | tig0018442:186712-186731 | Msa1366040:intron | 10.0% |
| !!! | AACTTTTATTTATTTGTTTT+CGG | + | tig0018442:187736-187755 | Msa1366040:intron | 10.0% |
| !! | TATTCAAAAAATGAATAAAA+TGG | + | tig0018442:188757-188776 | Msa1366040:intron | 10.0% |
| !!! | TTAAAATTATTCTGATTTTT+AGG | + | tig0018442:188929-188948 | Msa1366040:intron | 10.0% |
| !! | ATCAAATAAATAATAACTAT+TGG | + | tig0018442:188966-188985 | Msa1366040:intron | 10.0% |
| !!! | TTATTTTAGGAAAAAAAAAA+TGG | + | tig0018442:189250-189269 | Msa1366040:intron | 10.0% |
| !!! | TATTTTAGGAAAAAAAAAAT+GGG | + | tig0018442:189251-189270 | Msa1366040:intron | 10.0% |
| !! | AAATAGAAAATAAAAAAAGA+AGG | - | tig0018442:189310-189329 | None:intergenic | 10.0% |
| !! | ATATACAATAGAATAAAATT+CGG | + | tig0018442:189340-189359 | Msa1366040:intron | 10.0% |
| !!! | ATTTCCATTTTAAATTAAAA+AGG | + | tig0018442:189485-189504 | Msa1366040:intron | 10.0% |
| !!! | TTATCAATAATTTTATCTTA+CGG | - | tig0018442:190519-190538 | None:intergenic | 10.0% |
| !!! | TGCTTTTTTTTATATAAGTT+TGG | - | tig0018442:186049-186068 | None:intergenic | 15.0% |
| !! | AAACTTATATAAAAAAAAGC+AGG | + | tig0018442:186048-186067 | Msa1366040:intron | 15.0% |
| !! | TCAAATAAAATGAAAAGAAA+TGG | + | tig0018442:186881-186900 | Msa1366040:intron | 15.0% |
| !! | GAGATACATTATAAAAAATT+CGG | - | tig0018442:186908-186927 | None:intergenic | 15.0% |
| !!! | TAAAATAGTAACATTCTTTT+TGG | + | tig0018442:187017-187036 | Msa1366040:intron | 15.0% |
| !!! | AATAGATACATATTTTTTAG+TGG | - | tig0018442:187182-187201 | None:intergenic | 15.0% |
| !! | TTAATAAAAAAAAGGGATAT+AGG | + | tig0018442:187408-187427 | Msa1366040:intron | 15.0% |
| !!! | ATTTTCGTTTTGTTATTATA+AGG | - | tig0018442:188230-188249 | None:intergenic | 15.0% |
| !! | TATGATTATGATATAGTAAT+TGG | + | tig0018442:189025-189044 | Msa1366040:intron | 15.0% |
| !! | ATCAAATAATAGATAGTAAA+TGG | + | tig0018442:190034-190053 | Msa1366040:intron | 15.0% |
| !! | TCAAATAATAGATAGTAAAT+GGG | + | tig0018442:190035-190054 | Msa1366040:intron | 15.0% |
| !!! | TAAACAATGAAATTTTAGAA+TGG | + | tig0018442:190617-190636 | Msa1366040:intron | 15.0% |
| !! | AATTATTCGTAATAAGATAT+TGG | - | tig0018442:190706-190725 | None:intergenic | 15.0% |
| !!! | AGTAGAAATAACTGAATTTT+TGG | - | tig0018442:185332-185351 | None:intergenic | 20.0% |
| !! | CATTAAATGATCTTTCAAAT+TGG | + | tig0018442:185353-185372 | Msa1366040:CDS | 20.0% |
| !!! | ATTGAATTTGCTTCATTAAT+AGG | + | tig0018442:185427-185446 | Msa1366040:CDS | 20.0% |
| !!! | TTTTGTTATAGCATCTATAA+CGG | - | tig0018442:185728-185747 | None:intergenic | 20.0% |
| !!! | CTTATTGTATTTTGTACAAA+AGG | - | tig0018442:185985-186004 | None:intergenic | 20.0% |
| !! | AGAAGTAAAAAAAAAATGCA+GGG | + | tig0018442:186071-186090 | Msa1366040:intron | 20.0% |
| !!! | GCTGTTATTTTATATGTATA+TGG | + | tig0018442:186202-186221 | Msa1366040:intron | 20.0% |
| !! | TCCTGTATTTCATAAAAATT+GGG | - | tig0018442:186529-186548 | None:intergenic | 20.0% |
| !! | ATCCTGTATTTCATAAAAAT+TGG | - | tig0018442:186530-186549 | None:intergenic | 20.0% |
| !! | TTTCATTCATATCTTCATTA+TGG | + | tig0018442:186664-186683 | Msa1366040:intron | 20.0% |
| !!! | ATTCATTGAGATTCTAAAAT+TGG | + | tig0018442:186735-186754 | Msa1366040:intron | 20.0% |
| !!! | CATTAACTATTTAAGATGTA+CGG | + | tig0018442:186815-186834 | Msa1366040:intron | 20.0% |
| !! | ATTCAAATCGTAAAATTACT+TGG | - | tig0018442:186992-187011 | None:intergenic | 20.0% |
| !! | AATGAATAGATGTATATTCT+AGG | - | tig0018442:187100-187119 | None:intergenic | 20.0% |
| !! | TCATCATACATAATTTATCT+AGG | - | tig0018442:187153-187172 | None:intergenic | 20.0% |
| !!! | TTCCCAAATTTTAAGAAATT+TGG | + | tig0018442:187200-187219 | Msa1366040:intron | 20.0% |
| !!! | TCCCAAATTTTAAGAAATTT+GGG | + | tig0018442:187201-187220 | Msa1366040:intron | 20.0% |
| !! | TCCCAAATTTCTTAAAATTT+GGG | - | tig0018442:187205-187224 | None:intergenic | 20.0% |
| !! | TTCCCAAATTTCTTAAAATT+TGG | - | tig0018442:187206-187225 | None:intergenic | 20.0% |
| !! | CAAGTAATTTCCTAAAATTA+GGG | - | tig0018442:187338-187357 | None:intergenic | 20.0% |
| !! | TCAAGTAATTTCCTAAAATT+AGG | - | tig0018442:187339-187358 | None:intergenic | 20.0% |
| !! | GATATAGGATAAAAAATTAG+CGG | + | tig0018442:187423-187442 | Msa1366040:intron | 20.0% |
| !!! | TAAAAAATTAGCGGATTAAA+TGG | + | tig0018442:187432-187451 | Msa1366040:intron | 20.0% |
| !!! | AAAAAATTAGCGGATTAAAT+GGG | + | tig0018442:187433-187452 | Msa1366040:intron | 20.0% |
| !!! | TCAATGAAATTTTTAGTAAG+AGG | - | tig0018442:187512-187531 | None:intergenic | 20.0% |
| !! | ACTAAAAATTTCATTGATGT+CGG | + | tig0018442:187515-187534 | Msa1366040:intron | 20.0% |
| !! | AAGTTAAAATCAAAAAGGAT+AGG | - | tig0018442:187712-187731 | None:intergenic | 20.0% |
| !! | TCAGAAAGTTAAAATCAAAA+AGG | - | tig0018442:187717-187736 | None:intergenic | 20.0% |
| !! | ATCAATCTCAAAGAAAAAAA+CGG | - | tig0018442:187895-187914 | None:intergenic | 20.0% |
| !! | GTATTATGAGAATTATATGA+TGG | + | tig0018442:187944-187963 | Msa1366040:intron | 20.0% |
| !!! | AAGGAAATTTTTCCAAAAAT+GGG | - | tig0018442:187996-188015 | None:intergenic | 20.0% |
| !! | AAATCAATCAAACAAATAGA+AGG | - | tig0018442:188015-188034 | None:intergenic | 20.0% |
| !!! | TTGATTTTTTGAGAGTATTT+AGG | + | tig0018442:188157-188176 | Msa1366040:intron | 20.0% |
| !!! | TAGAAATAGTAAAGAGTATA+TGG | - | tig0018442:188473-188492 | None:intergenic | 20.0% |
| !! | AAACAAATAGAGAAAAAAAG+CGG | - | tig0018442:189204-189223 | None:intergenic | 20.0% |
| !!! | ATTTGTTTCATTTTGACATA+AGG | + | tig0018442:189216-189235 | Msa1366040:intron | 20.0% |
| !!! | TTTGTTTCATTTTGACATAA+GGG | + | tig0018442:189217-189236 | Msa1366040:intron | 20.0% |
| !! | TATTATACTACAAAAAGAAC+TGG | - | tig0018442:189383-189402 | None:intergenic | 20.0% |
| !!! | CACTCCTTTTTAATTTAAAA+TGG | - | tig0018442:189492-189511 | None:intergenic | 20.0% |
| !! | AATTAAGAATAATTTGATCG+AGG | + | tig0018442:190126-190145 | Msa1366040:intron | 20.0% |
| !! | TGTTTATACAGAAAGAAATT+AGG | + | tig0018442:190219-190238 | Msa1366040:intron | 20.0% |
| !! | AAATAAATCCTCTTTCTTAT+CGG | + | tig0018442:191061-191080 | Msa1366040:intron | 20.0% |
| !! | ATGGATGTTATATAACATAA+AGG | + | tig0018442:191351-191370 | Msa1366040:intron | 20.0% |
| !!! | TTGGTTTTTTGATCAAGTAA+GGG | - | tig0018442:185313-185332 | None:intergenic | 25.0% |
| !!! | TTTGGTTTTTTGATCAAGTA+AGG | - | tig0018442:185314-185333 | None:intergenic | 25.0% |
| ! | TCATATAATCGAACTAAAGA+AGG | - | tig0018442:185553-185572 | None:intergenic | 25.0% |
| !!! | AGCAATAACATATTTTGGTT+CGG | - | tig0018442:185584-185603 | None:intergenic | 25.0% |
| ! | ACCAAAATATGTTATTGCTA+TGG | + | tig0018442:185585-185604 | Msa1366040:CDS | 25.0% |
| ! | CCAAAATATGTTATTGCTAT+GGG | + | tig0018442:185586-185605 | Msa1366040:CDS | 25.0% |
| ! | TAATCCTTGATTATAATTGC+CGG | - | tig0018442:185860-185879 | None:intergenic | 25.0% |
| ! | ATATTTGAAAAATGTGTCAG+AGG | - | tig0018442:185914-185933 | None:intergenic | 25.0% |
| !!! | TAATTCACTTTTTCGTTTGT+CGG | - | tig0018442:185954-185973 | None:intergenic | 25.0% |
| ! | AACGAAAAAGTGAATTAAAC+AGG | + | tig0018442:185957-185976 | Msa1366040:intron | 25.0% |
| ! | GAGAAGTAAAAAAAAAATGC+AGG | + | tig0018442:186070-186089 | Msa1366040:intron | 25.0% |
| ! | CCTGTATTTCATAAAAATTG+GGG | - | tig0018442:186528-186547 | None:intergenic | 25.0% |
| ! | ATTCATATCTTCATTATGGA+TGG | + | tig0018442:186668-186687 | Msa1366040:intron | 25.0% |
| ! | TTCATATCTTCATTATGGAT+GGG | + | tig0018442:186669-186688 | Msa1366040:intron | 25.0% |
| !!! | ATTGAGATTCTAAAATTGGA+TGG | + | tig0018442:186739-186758 | Msa1366040:intron | 25.0% |
| ! | ATGGAACGATACTTAATTTA+GGG | + | tig0018442:186758-186777 | Msa1366040:intron | 25.0% |
| ! | CAGAAAAAATCGAAACAAAA+TGG | + | tig0018442:187044-187063 | Msa1366040:intron | 25.0% |
| !!! | TTTATTTGTTTTCGGAAAGA+AGG | + | tig0018442:187744-187763 | Msa1366040:intron | 25.0% |
| ! | TCAATCTCAAAGAAAAAAAC+GGG | - | tig0018442:187894-187913 | None:intergenic | 25.0% |
| ! | GATTGATATCATATCTCATT+AGG | + | tig0018442:187908-187927 | Msa1366040:intron | 25.0% |
| !! | GAAGGAAATTTTTCCAAAAA+TGG | - | tig0018442:187997-188016 | None:intergenic | 25.0% |
| ! | TACTCTCAAAAAATCAAAGA+AGG | - | tig0018442:188154-188173 | None:intergenic | 25.0% |
| ! | AATCTTCCTATCTAATAATC+AGG | + | tig0018442:188623-188642 | Msa1366040:intron | 25.0% |
| ! | CTATCTAATAATCAGGATAT+CGG | + | tig0018442:188630-188649 | Msa1366040:intron | 25.0% |
| ! | TATCTAATAATCAGGATATC+GGG | + | tig0018442:188631-188650 | Msa1366040:intron | 25.0% |
| ! | TAACACAATTGTGGATTTAT+CGG | - | tig0018442:189109-189128 | None:intergenic | 25.0% |
| !!! | GGGATAATCTCTTTTATTTT+AGG | + | tig0018442:189237-189256 | Msa1366040:intron | 25.0% |
| !! | CAAAAATTGCGTTTTCATTA+TGG | + | tig0018442:189665-189684 | Msa1366040:CDS | 25.0% |
| !!! | TGGATAAATACTTTTTCGAT+TGG | + | tig0018442:189781-189800 | Msa1366040:intron | 25.0% |
| !!! | GGATAAATACTTTTTCGATT+GGG | + | tig0018442:189782-189801 | Msa1366040:intron | 25.0% |
| ! | ACTAATCCTTTATATTGGAA+TGG | - | tig0018442:190012-190031 | None:intergenic | 25.0% |
| ! | GATTGACTAATCCTTTATAT+TGG | - | tig0018442:190017-190036 | None:intergenic | 25.0% |
| ! | ATAATAGATAGTAAATGGGT+TGG | + | tig0018442:190039-190058 | Msa1366040:intron | 25.0% |
| !! | GGTTTAAAATTAATGATTGC+TGG | + | tig0018442:190060-190079 | Msa1366040:intron | 25.0% |
| !! | AACAAATAGTGGAATAAAGT+GGG | - | tig0018442:190203-190222 | None:intergenic | 25.0% |
| !! | AAACAAATAGTGGAATAAAG+TGG | - | tig0018442:190204-190223 | None:intergenic | 25.0% |
| ! | CTTTCTGTATAAACAAATAG+TGG | - | tig0018442:190214-190233 | None:intergenic | 25.0% |
| ! | TAACATTGATGAACTTGATA+AGG | + | tig0018442:190300-190319 | Msa1366040:intron | 25.0% |
| ! | TGTATTGTACAAATCTTGTT+TGG | + | tig0018442:190574-190593 | Msa1366040:intron | 25.0% |
| !! | GTATTGTACAAATCTTGTTT+GGG | + | tig0018442:190575-190594 | Msa1366040:intron | 25.0% |
| !! | TATTGTACAAATCTTGTTTG+GGG | + | tig0018442:190576-190595 | Msa1366040:intron | 25.0% |
| !!! | AATTTTTTCTTTCTCTAGAC+TGG | - | tig0018442:190802-190821 | None:intergenic | 25.0% |
| ! | AAAGGTTATACCTATACTAT+GGG | + | tig0018442:190947-190966 | Msa1366040:intron | 25.0% |
| ! | AATAAATCCTCTTTCTTATC+GGG | + | tig0018442:191062-191081 | Msa1366040:intron | 25.0% |
| ! | AGTATGTTATTACTGGATAA+TGG | - | tig0018442:191225-191244 | None:intergenic | 25.0% |
| ! | TAACATCAGTATGTTATTAC+TGG | - | tig0018442:191232-191251 | None:intergenic | 25.0% |
| ! | TAATAAAAGATCCTGAAAGA+AGG | + | tig0018442:191250-191269 | Msa1366040:intron | 25.0% |
| !! | TGAGAATATTGCAATCTTTT+TGG | + | tig0018442:191319-191338 | Msa1366040:intron | 25.0% |
| !! | ATCTTTTTGGATTTGATTCA+TGG | + | tig0018442:191332-191351 | Msa1366040:intron | 25.0% |
| ! | GATGTTATATAACATAAAGG+AGG | + | tig0018442:191354-191373 | Msa1366040:intron | 25.0% |
| !!! | GCAATAACATATTTTGGTTC+GGG | - | tig0018442:185583-185602 | None:intergenic | 30.0% |
| ! | CCCATAGCAATAACATATTT+TGG | - | tig0018442:185589-185608 | None:intergenic | 30.0% |
| ! | TTTGTTATCAACGAGAGAAT+AGG | + | tig0018442:185788-185807 | Msa1366040:intron | 30.0% |
| !! | GTTATCTCTGAAATAGATGA+TGG | - | tig0018442:185892-185911 | None:intergenic | 30.0% |
| !!! | ATCTTTGGTTTTGATTACCA+AGG | + | tig0018442:186136-186155 | Msa1366040:intron | 30.0% |
| TTTGTAAAGTCTCTATTCCT+TGG | - | tig0018442:186156-186175 | None:intergenic | 30.0% | |
| ! | TACTTTTATGCATACCTCTT+CGG | - | tig0018442:186328-186347 | None:intergenic | 30.0% |
| CAGAAAATAGAAGGAATTCT+CGG | - | tig0018442:186369-186388 | None:intergenic | 30.0% | |
| ! | GAGAATTCCTTCTATTTTCT+GGG | + | tig0018442:186368-186387 | Msa1366040:intron | 30.0% |
| TTTCAAACCCAGAAAATAGA+AGG | - | tig0018442:186378-186397 | None:intergenic | 30.0% | |
| !!! | AAAGTGCTGATTTTCAAGAA+AGG | + | tig0018442:186396-186415 | Msa1366040:intron | 30.0% |
| !!! | AAGTGCTGATTTTCAAGAAA+GGG | + | tig0018442:186397-186416 | Msa1366040:intron | 30.0% |
| AGGGAATCTTATGATATGTT+AGG | + | tig0018442:186416-186435 | Msa1366040:intron | 30.0% | |
| ATTAAAATACGTTTCAGACG+CGG | - | tig0018442:186461-186480 | None:intergenic | 30.0% | |
| ! | CCCCAATTTTTATGAAATAC+AGG | + | tig0018442:186525-186544 | Msa1366040:intron | 30.0% |
| AGATATTTCTTGACTATCTG+GGG | - | tig0018442:186598-186617 | None:intergenic | 30.0% | |
| CAGATATTTCTTGACTATCT+GGG | - | tig0018442:186599-186618 | None:intergenic | 30.0% | |
| ACAGATATTTCTTGACTATC+TGG | - | tig0018442:186600-186619 | None:intergenic | 30.0% | |
| TAGATTCGACAGAATAATAG+AGG | + | tig0018442:186641-186660 | Msa1366040:intron | 30.0% | |
| GGATGGGATAAATAACAAAA+TGG | + | tig0018442:186685-186704 | Msa1366040:intron | 30.0% | |
| GATGGAACGATACTTAATTT+AGG | + | tig0018442:186757-186776 | Msa1366040:intron | 30.0% | |
| !!! | ACTTTTTCAGTTCATCCTAT+TGG | - | tig0018442:186788-186807 | None:intergenic | 30.0% |
| GGTAACATCAATTAGATATC+CGG | + | tig0018442:186836-186855 | Msa1366040:intron | 30.0% | |
| !!! | TACTTTTTCTTTTTCGTAGC+CGG | - | tig0018442:186858-186877 | None:intergenic | 30.0% |
| CGTAAAATTACTTGGTTGAA+AGG | - | tig0018442:186984-187003 | None:intergenic | 30.0% | |
| ACATAATTTATCTAGGCGTA+CGG | - | tig0018442:187146-187165 | None:intergenic | 30.0% | |
| !! | CTGATGGATCTTTTGAATAA+CGG | - | tig0018442:187588-187607 | None:intergenic | 30.0% |
| !! | ATTGCCCATTTTTAATTCCA+GGG | + | tig0018442:187779-187798 | Msa1366040:CDS | 30.0% |
| AGAACCCTGGAATTAAAAAT+GGG | - | tig0018442:187786-187805 | None:intergenic | 30.0% | |
| CAATCTCAAAGAAAAAAACG+GGG | - | tig0018442:187893-187912 | None:intergenic | 30.0% | |
| ! | ATTTTTCCAAAAATGGGAGT+AGG | - | tig0018442:187990-188009 | None:intergenic | 30.0% |
| ! | TCATTTCTGATTCGACTAAA+TGG | - | tig0018442:188059-188078 | None:intergenic | 30.0% |
| CTCAAAAAATCAAAGAAGGA+GGG | - | tig0018442:188150-188169 | None:intergenic | 30.0% | |
| TCTCAAAAAATCAAAGAAGG+AGG | - | tig0018442:188151-188170 | None:intergenic | 30.0% | |
| CGATATCCTGATTATTAGAT+AGG | - | tig0018442:188632-188651 | None:intergenic | 30.0% | |
| ATAACTAAGATCCAGTAGTT+AGG | + | tig0018442:189075-189094 | Msa1366040:intron | 30.0% | |
| TTTCAAAAAATACGTCGTCT+GGG | + | tig0018442:189537-189556 | Msa1366040:CDS | 30.0% | |
| ACAATTACTTGAAATGCGTT+TGG | + | tig0018442:189761-189780 | Msa1366040:intron | 30.0% | |
| !!! | AATACTTTTTCGATTGGGTA+TGG | + | tig0018442:189787-189806 | Msa1366040:intron | 30.0% |
| CATTAACTAAAACATGTCTG+TGG | - | tig0018442:189847-189866 | None:intergenic | 30.0% | |
| !!! | CACAGACATGTTTTAGTTAA+TGG | + | tig0018442:189845-189864 | Msa1366040:intron | 30.0% |
| TTCGCTGTAATAATATCTTG+AGG | - | tig0018442:189905-189924 | None:intergenic | 30.0% | |
| TCAAGATATTATTACAGCGA+AGG | + | tig0018442:189904-189923 | Msa1366040:intron | 30.0% | |
| CAAGATATTATTACAGCGAA+GGG | + | tig0018442:189905-189924 | Msa1366040:intron | 30.0% | |
| CTTGATCCATTCCAATATAA+AGG | + | tig0018442:190003-190022 | Msa1366040:intron | 30.0% | |
| TCATTATTCCAACTTTGATG+TGG | - | tig0018442:190255-190274 | None:intergenic | 30.0% | |
| TAATCATTATGTAGGAGAGA+TGG | - | tig0018442:190405-190424 | None:intergenic | 30.0% | |
| ! | CAATAATTTTATCTTACGGC+AGG | - | tig0018442:190515-190534 | None:intergenic | 30.0% |
| CAGTACGAAATAACGTAAAA+TGG | - | tig0018442:190556-190575 | None:intergenic | 30.0% | |
| ! | ATTGTACAAATCTTGTTTGG+GGG | + | tig0018442:190577-190596 | Msa1366040:intron | 30.0% |
| ! | GTAATAAGATATTGGCTACA+TGG | - | tig0018442:190698-190717 | None:intergenic | 30.0% |
| ACCTAAAATTGAAGCATATG+AGG | - | tig0018442:190913-190932 | None:intergenic | 30.0% | |
| AGGTTATAGTATTAAGCGAA+AGG | + | tig0018442:190929-190948 | Msa1366040:intron | 30.0% | |
| GAAAGGTTATACCTATACTA+TGG | + | tig0018442:190946-190965 | Msa1366040:intron | 30.0% | |
| TATCCAAAATAAGAACGAGA+TGG | - | tig0018442:191121-191140 | None:intergenic | 30.0% | |
| ATATTCTCATTATCACGTAG+CGG | - | tig0018442:191308-191327 | None:intergenic | 30.0% | |
| ATCAAGTAAGGGAAACTCAA+TGG | - | tig0018442:185302-185321 | None:intergenic | 35.0% | |
| ! | CGATTTGACTTTGATCGTTA+TGG | + | tig0018442:185454-185473 | Msa1366040:CDS | 35.0% |
| !! | AGGAGCCATTTTCATAGTTA+CGG | - | tig0018442:185533-185552 | None:intergenic | 35.0% |
| CCGAACAGTACTATAAGAAT+CGG | - | tig0018442:185644-185663 | None:intergenic | 35.0% | |
| CCGATTCTTATAGTACTGTT+CGG | + | tig0018442:185641-185660 | Msa1366040:CDS | 35.0% | |
| CGATTCTTATAGTACTGTTC+GGG | + | tig0018442:185642-185661 | Msa1366040:CDS | 35.0% | |
| GATTCTTATAGTACTGTTCG+GGG | + | tig0018442:185643-185662 | Msa1366040:CDS | 35.0% | |
| ACGAACCACAAATTTCATCT+TGG | + | tig0018442:185820-185839 | Msa1366040:intron | 35.0% | |
| CATACCGGCAATTATAATCA+AGG | + | tig0018442:185853-185872 | Msa1366040:intron | 35.0% | |
| CGGAATAGTTCATAGATCTT+TGG | + | tig0018442:186121-186140 | Msa1366040:intron | 35.0% | |
| ! | ACTTTTATGCATACCTCTTC+GGG | - | tig0018442:186327-186346 | None:intergenic | 35.0% |
| ! | CGAGAATTCCTTCTATTTTC+TGG | + | tig0018442:186367-186386 | Msa1366040:intron | 35.0% |
| !!! | GTATTTTAATGCCCGAAAGT+TGG | + | tig0018442:186471-186490 | Msa1366040:intron | 35.0% |
| GCGATATAATCTTTACGCAA+AGG | - | tig0018442:186506-186525 | None:intergenic | 35.0% | |
| ! | TTAATTTAGGGTGAGCCAAT+AGG | + | tig0018442:186770-186789 | Msa1366040:intron | 35.0% |
| GGCTACGAAAAAGAAAAAGT+AGG | + | tig0018442:186857-186876 | Msa1366040:intron | 35.0% | |
| ! | CTTCCCTAGATTCAACTTTT+TGG | + | tig0018442:186958-186977 | Msa1366040:intron | 35.0% |
| AGGCCAAAAAGTTGAATCTA+GGG | - | tig0018442:186964-186983 | None:intergenic | 35.0% | |
| AAGGCCAAAAAGTTGAATCT+AGG | - | tig0018442:186965-186984 | None:intergenic | 35.0% | |
| TACTCATAGAAATGAATCGC+CGG | + | tig0018442:187230-187249 | Msa1366040:intron | 35.0% | |
| ! | TGACACATCACCCTAATTTT+AGG | + | tig0018442:187325-187344 | Msa1366040:intron | 35.0% |
| !! | TCGGTATTGACATGTAGAAT+GGG | + | tig0018442:187534-187553 | Msa1366040:intron | 35.0% |
| TCAAAAGATCCATCAGACTA+TGG | + | tig0018442:187592-187611 | Msa1366040:intron | 35.0% | |
| ATGGAAGCTGTTCTAACAAA+TGG | - | tig0018442:187677-187696 | None:intergenic | 35.0% | |
| ! | TGTTTTCGGAAAGAAGGATT+TGG | + | tig0018442:187750-187769 | Msa1366040:intron | 35.0% |
| !! | GATTGCCCATTTTTAATTCC+AGG | + | tig0018442:187778-187797 | Msa1366040:CDS | 35.0% |
| GAGAACCCTGGAATTAAAAA+TGG | - | tig0018442:187787-187806 | None:intergenic | 35.0% | |
| ACTTGTAAGTTTCCATACCA+AGG | + | tig0018442:187824-187843 | Msa1366040:intron | 35.0% | |
| CAAAGAAAAAAACGGGGATA+TGG | - | tig0018442:187887-187906 | None:intergenic | 35.0% | |
| ! | TAGAAACCTACTCCCATTTT+TGG | + | tig0018442:187981-188000 | Msa1366040:intron | 35.0% |
| CGGAATTATTTCCTAACTAC+TGG | - | tig0018442:189089-189108 | None:intergenic | 35.0% | |
| ATTTGTAATGCGATGGTCAT+CGG | + | tig0018442:189164-189183 | Msa1366040:intron | 35.0% | |
| TAGAGAAAAAAAGCGGCTAT+CGG | - | tig0018442:189197-189216 | None:intergenic | 35.0% | |
| TGTTTATGTCACGTTACAGA+GGG | + | tig0018442:189510-189529 | Msa1366040:intron | 35.0% | |
| GTTTCAAAAAATACGTCGTC+TGG | + | tig0018442:189536-189555 | Msa1366040:CDS | 35.0% | |
| TTCAAAAAATACGTCGTCTG+GGG | + | tig0018442:189538-189557 | Msa1366040:CDS | 35.0% | |
| TACCAGGACTAACTAGTAAA+CGG | + | tig0018442:189564-189583 | Msa1366040:CDS | 35.0% | |
| TCTGTGGTTAACTAATTGAC+GGG | - | tig0018442:189831-189850 | None:intergenic | 35.0% | |
| GTCTGTGGTTAACTAATTGA+CGG | - | tig0018442:189832-189851 | None:intergenic | 35.0% | |
| TAGAGAATCCACATCAAAGT+TGG | + | tig0018442:190244-190263 | Msa1366040:intron | 35.0% | |
| TTGATGAACTTGATAAGGTG+CGG | + | tig0018442:190305-190324 | Msa1366040:intron | 35.0% | |
| TCGAGGCATAATCATTATGT+AGG | - | tig0018442:190413-190432 | None:intergenic | 35.0% | |
| CATACATATTCCATTTGCGT+AGG | + | tig0018442:190446-190465 | Msa1366040:intron | 35.0% | |
| GAGCAAAAAAAACTACTTCG+AGG | + | tig0018442:190489-190508 | Msa1366040:intron | 35.0% | |
| TTTATCCGAGATCTAGTCAT+AGG | - | tig0018442:190650-190669 | None:intergenic | 35.0% | |
| ATGACTAGATCTCGGATAAA+TGG | + | tig0018442:190650-190669 | Msa1366040:intron | 35.0% | |
| ! | AAGATATTGGCTACATGGTA+AGG | - | tig0018442:190693-190712 | None:intergenic | 35.0% |
| ! | TCTTTTTCTCCAGAAGTTGT+CGG | - | tig0018442:190729-190748 | None:intergenic | 35.0% |
| GCATTCACTTATTACAGAGA+TGG | + | tig0018442:190750-190769 | Msa1366040:intron | 35.0% | |
| ! | GCCTCATATGCTTCAATTTT+AGG | + | tig0018442:190909-190928 | Msa1366040:intron | 35.0% |
| GTTATACCTATACTATGGGT+AGG | + | tig0018442:190951-190970 | Msa1366040:intron | 35.0% | |
| GATTAACCTACCCATAGTAT+AGG | - | tig0018442:190960-190979 | None:intergenic | 35.0% | |
| !! | CATCCATCTCGTTCTTATTT+TGG | + | tig0018442:191115-191134 | Msa1366040:intron | 35.0% |
| AAGACTGTTGAGTGACTAAT+TGG | + | tig0018442:191154-191173 | Msa1366040:intron | 35.0% | |
| AAAAGATCCTGAAAGAAGGT+TGG | + | tig0018442:191254-191273 | Msa1366040:intron | 35.0% | |
| TATTCTCATTATCACGTAGC+GGG | - | tig0018442:191307-191326 | None:intergenic | 35.0% | |
| ! | CGTGAGATTTTCATCTCATA+CGG | - | tig0018442:191382-191401 | None:intergenic | 35.0% |
| TGAGATGAAAATCTCACGTA+CGG | + | tig0018442:191384-191403 | Msa1366040:CDS | 35.0% | |
| CTCAATCTGAAGGAAATATG+CGG | + | tig0018442:191455-191474 | Msa1366040:CDS | 35.0% | |
| GGTCAAGACTATCCAGTTTA+TGG | + | tig0018442:185374-185393 | Msa1366040:CDS | 40.0% | |
| ATAGAGAAGTGGCCATAAAC+TGG | - | tig0018442:185389-185408 | None:intergenic | 40.0% | |
| AGTTTATGGCCACTTCTCTA+TGG | + | tig0018442:185388-185407 | Msa1366040:CDS | 40.0% | |
| CAACTAGTACCATAGAGAAG+TGG | - | tig0018442:185400-185419 | None:intergenic | 40.0% | |
| TGACTTTGATCGTTATGGAC+TGG | + | tig0018442:185459-185478 | Msa1366040:CDS | 40.0% | |
| !!! | GGCAGACCTTATTTTAACAG+CGG | + | tig0018442:185504-185523 | Msa1366040:CDS | 40.0% |
| !!! | GCAGACCTTATTTTAACAGC+GGG | + | tig0018442:185505-185524 | Msa1366040:CDS | 40.0% |
| ATAGCATCTATAACGGCTTC+CGG | - | tig0018442:185721-185740 | None:intergenic | 40.0% | |
| TGCGTCCAAGATGAAATTTG+TGG | - | tig0018442:185828-185847 | None:intergenic | 40.0% | |
| !!! | TTCACTTTTTCGTTTGTCGG+AGG | - | tig0018442:185951-185970 | None:intergenic | 40.0% |
| GACTTTACAAATAAAGCCCG+AGG | + | tig0018442:186165-186184 | Msa1366040:intron | 40.0% | |
| TACAAATAAAGCCCGAGGAT+TGG | + | tig0018442:186170-186189 | Msa1366040:intron | 40.0% | |
| TAGTTTAGATCAACCCGAAG+AGG | + | tig0018442:186311-186330 | Msa1366040:CDS | 40.0% | |
| !! | GCATAAAAGTATTTGCCCCA+AGG | + | tig0018442:186337-186356 | Msa1366040:intron | 40.0% |
| ! | AATTCTCGGATTTTGCCTTG+GGG | - | tig0018442:186355-186374 | None:intergenic | 40.0% |
| ! | GAATTCTCGGATTTTGCCTT+GGG | - | tig0018442:186356-186375 | None:intergenic | 40.0% |
| TTAATGCCCGAAAGTTGGAT+AGG | + | tig0018442:186476-186495 | Msa1366040:intron | 40.0% | |
| TTGAATCTAGGGAAGTTCAG+AGG | - | tig0018442:186953-186972 | None:intergenic | 40.0% | |
| TTAGGGTGATGTGTCAAGAA+TGG | - | tig0018442:187321-187340 | None:intergenic | 40.0% | |
| !!! | TAGCGGATTAAATGGGCTTT+TGG | + | tig0018442:187440-187459 | Msa1366040:intron | 40.0% |
| !!! | AGCGGATTAAATGGGCTTTT+GGG | + | tig0018442:187441-187460 | Msa1366040:intron | 40.0% |
| ! | GTCGACTTTAGAAATCGTGA+GGG | - | tig0018442:187483-187502 | None:intergenic | 40.0% |
| !! | CTCACGATTTCTAAAGTCGA+CGG | + | tig0018442:187482-187501 | Msa1366040:intron | 40.0% |
| !! | GTCGGTATTGACATGTAGAA+TGG | + | tig0018442:187533-187552 | Msa1366040:intron | 40.0% |
| AAAGATCCATCAGACTATGG+TGG | + | tig0018442:187595-187614 | Msa1366040:intron | 40.0% | |
| CTTTCAAATTCAGAGAACCC+TGG | - | tig0018442:187799-187818 | None:intergenic | 40.0% | |
| AATTGGATTGAGCCTTGGTA+TGG | - | tig0018442:187839-187858 | None:intergenic | 40.0% | |
| GACTTAATTGGATTGAGCCT+TGG | - | tig0018442:187844-187863 | None:intergenic | 40.0% | |
| GTGTTTATGTCACGTTACAG+AGG | + | tig0018442:189509-189528 | Msa1366040:intron | 40.0% | |
| !!! | ATTTTTTACTCGAGCGCGAT+TGG | - | tig0018442:189616-189635 | None:intergenic | 40.0% |
| CTGAAAAGCGAAAGGTCAAA+CGG | + | tig0018442:189726-189745 | Msa1366040:intron | 40.0% | |
| !! | TTAACTAATTGACGGGCTTG+AGG | - | tig0018442:189824-189843 | None:intergenic | 40.0% |
| TGAGGTTTGCAACGATAACT+TGG | - | tig0018442:189887-189906 | None:intergenic | 40.0% | |
| !! | AATGGATTGGCAATTCTTCG+CGG | - | tig0018442:189978-189997 | None:intergenic | 40.0% |
| GGATCAAGAGTCAAATGGAT+TGG | - | tig0018442:189991-190010 | None:intergenic | 40.0% | |
| GGAATGGATCAAGAGTCAAA+TGG | - | tig0018442:189996-190015 | None:intergenic | 40.0% | |
| ACCCACGTCTATACATGAAT+GGG | - | tig0018442:190158-190177 | None:intergenic | 40.0% | |
| TACCCACGTCTATACATGAA+TGG | - | tig0018442:190159-190178 | None:intergenic | 40.0% | |
| TCATGTATAGACGTGGGTAT+AGG | + | tig0018442:190160-190179 | Msa1366040:intron | 40.0% | |
| ! | ATAGTGGAATAAAGTGGGCA+AGG | - | tig0018442:190198-190217 | None:intergenic | 40.0% |
| !! | GTAGGCTTTTTGTTTACCGA+GGG | - | tig0018442:190348-190367 | None:intergenic | 40.0% |
| !! | TGTAGGCTTTTTGTTTACCG+AGG | - | tig0018442:190349-190368 | None:intergenic | 40.0% |
| TGCTACCTATGACTAGATCT+CGG | + | tig0018442:190642-190661 | Msa1366040:intron | 40.0% | |
| CGAATAATTCCGACAACTTC+TGG | + | tig0018442:190717-190736 | Msa1366040:intron | 40.0% | |
| ! | GACAACTTCTGGAGAAAAAG+AGG | + | tig0018442:190728-190747 | Msa1366040:intron | 40.0% |
| ! | AAAAAACCTACGCTTGCTGA+AGG | + | tig0018442:190832-190851 | Msa1366040:intron | 40.0% |
| AATCGGAATACACGACAGAA+GGG | - | tig0018442:190883-190902 | None:intergenic | 40.0% | |
| TAATCGGAATACACGACAGA+AGG | - | tig0018442:190884-190903 | None:intergenic | 40.0% | |
| GCATATGAGGCTGCATTAAT+CGG | - | tig0018442:190900-190919 | None:intergenic | 40.0% | |
| ATCCTCTTTCTTATCGGGAT+CGG | + | tig0018442:191067-191086 | Msa1366040:intron | 40.0% | |
| GATCGGACTAACTAGATGTT+GGG | + | tig0018442:191084-191103 | Msa1366040:intron | 40.0% | |
| CAACAGTCTTCGATGGTTAT+TGG | - | tig0018442:191144-191163 | None:intergenic | 40.0% | |
| TTGGAAATTTAGCAGCGTTG+AGG | + | tig0018442:191173-191192 | Msa1366040:intron | 40.0% | |
| !! | ATCGTTATGGACTGGTACCA+CGG | + | tig0018442:185467-185486 | Msa1366040:CDS | 45.0% |
| AAAATAAGGTCTGCCTGCCT+AGG | - | tig0018442:185499-185518 | None:intergenic | 45.0% | |
| ! | GGGCACCGTAACTATGAAAA+TGG | + | tig0018442:185525-185544 | Msa1366040:CDS | 45.0% |
| ATGGGAGCCTGTACAATTAC+AGG | + | tig0018442:185604-185623 | Msa1366040:CDS | 45.0% | |
| GAGCCTGTACAATTACAGGA+GGG | + | tig0018442:185608-185627 | Msa1366040:CDS | 45.0% | |
| CATCCCTCCTGTAATTGTAC+AGG | - | tig0018442:185614-185633 | None:intergenic | 45.0% | |
| CGTGGATAAGCTAATTCCTG+TGG | + | tig0018442:185666-185685 | Msa1366040:CDS | 45.0% | |
| TCTATAACGGCTTCCGGTTT+AGG | - | tig0018442:185715-185734 | None:intergenic | 45.0% | |
| ! | TCTGCTTGGCTAGTCAAACA+CGG | + | tig0018442:186101-186120 | Msa1366040:intron | 45.0% |
| AGCAATCGAATGCCAATCCT+CGG | - | tig0018442:186185-186204 | None:intergenic | 45.0% | |
| GTGCTACATCATAGGCACAT+GGG | - | tig0018442:186245-186264 | None:intergenic | 45.0% | |
| ACACTAGCTAATAGTCCTCC+TGG | - | tig0018442:186267-186286 | None:intergenic | 45.0% | |
| ! | GGAATTCTCGGATTTTGCCT+TGG | - | tig0018442:186357-186376 | None:intergenic | 45.0% |
| AGGCCATCCTATCCAACTTT+CGG | - | tig0018442:186486-186505 | None:intergenic | 45.0% | |
| ! | CACCAGTTCAAATCTGGTTC+CGG | - | tig0018442:187252-187271 | None:intergenic | 45.0% |
| TCGTGTCACCAGTTCAAATC+TGG | - | tig0018442:187258-187277 | None:intergenic | 45.0% | |
| AGATTTGAACTGGTGACACG+AGG | + | tig0018442:187257-187276 | Msa1366040:intron | 45.0% | |
| ! | TTTTCAGTCCTCTGCTCTAC+CGG | + | tig0018442:187281-187300 | Msa1366040:intron | 45.0% |
| GTGATGTGTCAAGAATGGTC+GGG | - | tig0018442:187316-187335 | None:intergenic | 45.0% | |
| GGTGATGTGTCAAGAATGGT+CGG | - | tig0018442:187317-187336 | None:intergenic | 45.0% | |
| !! | GCGGATTAAATGGGCTTTTG+GGG | + | tig0018442:187442-187461 | Msa1366040:intron | 45.0% |
| !! | AAATGGGCTTTTGGGGATAG+AGG | + | tig0018442:187449-187468 | Msa1366040:intron | 45.0% |
| !! | AATGGGCTTTTGGGGATAGA+GGG | + | tig0018442:187450-187469 | Msa1366040:intron | 45.0% |
| !! | CGTCGACTTTAGAAATCGTG+AGG | - | tig0018442:187484-187503 | None:intergenic | 45.0% |
| GTAGACGCTACGGACTTAAT+TGG | - | tig0018442:187856-187875 | None:intergenic | 45.0% | |
| AAACGGGGATATGGCGAAAT+TGG | - | tig0018442:187878-187897 | None:intergenic | 45.0% | |
| GTCTGTATCTGTCTGCTCTA+AGG | - | tig0018442:188208-188227 | None:intergenic | 45.0% | |
| GGGCTCTCATAACACAATTG+TGG | - | tig0018442:189118-189137 | None:intergenic | 45.0% | |
| GCATCGCATTTGTAATGCGA+TGG | + | tig0018442:189157-189176 | Msa1366040:intron | 45.0% | |
| ACTAGTAAACGGCCTACAGT+TGG | + | tig0018442:189575-189594 | Msa1366040:CDS | 45.0% | |
| CTAAGTTCGCTTCCAACTGT+AGG | - | tig0018442:189590-189609 | None:intergenic | 45.0% | |
| TCGTATCGCTGAAAAGCGAA+AGG | + | tig0018442:189718-189737 | Msa1366040:CDS | 45.0% | |
| !! | ATGGATTGGCAATTCTTCGC+GGG | - | tig0018442:189977-189996 | None:intergenic | 45.0% |
| TCCCCATTCATGTATAGACG+TGG | + | tig0018442:190153-190172 | Msa1366040:intron | 45.0% | |
| CCCACGTCTATACATGAATG+GGG | - | tig0018442:190157-190176 | None:intergenic | 45.0% | |
| CCCCATTCATGTATAGACGT+GGG | + | tig0018442:190154-190173 | Msa1366040:intron | 45.0% | |
| TTGATAAGGTGCGGAAAGAG+AGG | + | tig0018442:190314-190333 | Msa1366040:intron | 45.0% | |
| TGATAAGGTGCGGAAAGAGA+GGG | + | tig0018442:190315-190334 | Msa1366040:intron | 45.0% | |
| ! | TAGCACTGGAACTGCTATGT+AGG | - | tig0018442:190366-190385 | None:intergenic | 45.0% |
| TATGCCTCGAGTGAATAGTG+AGG | + | tig0018442:190423-190442 | Msa1366040:intron | 45.0% | |
| TATGCCTCACTATTCACTCG+AGG | - | tig0018442:190430-190449 | None:intergenic | 45.0% | |
| ATTATGTGCGCCTACGCAAA+TGG | - | tig0018442:190459-190478 | None:intergenic | 45.0% | |
| CCTATTGGTACTAGTGGAGT+AGG | - | tig0018442:190982-191001 | None:intergenic | 45.0% | |
| CCTACTCCACTAGTACCAAT+AGG | + | tig0018442:190979-190998 | Msa1366040:CDS | 45.0% | |
| ACTCCACTAGTACCAATAGG+CGG | + | tig0018442:190982-191001 | Msa1366040:CDS | 45.0% | |
| GGATCGGACTAACTAGATGT+TGG | + | tig0018442:191083-191102 | Msa1366040:intron | 45.0% | |
| AGTCACTCAACAGTCTTCGA+TGG | - | tig0018442:191151-191170 | None:intergenic | 45.0% | |
| TCTCTAGCCAACCTTCTTTC+AGG | - | tig0018442:191264-191283 | None:intergenic | 45.0% | |
| GAAAATCTCACGTACGGTTC+TGG | + | tig0018442:191390-191409 | Msa1366040:CDS | 45.0% | |
| AGATTGAGCGACATCCGTTA+CGG | - | tig0018442:191443-191462 | None:intergenic | 45.0% | |
| !!! | TTTGAATTTTAATAAAAAAA+AGG | + | tig0018442:187400-187419 | Msa1366040:intron | 5.0% |
| !!! | TTGAATTTTAATAAAAAAAA+GGG | + | tig0018442:187401-187420 | Msa1366040:intron | 5.0% |
| !!! | TTATATAGAATTTTATTTTA+AGG | + | tig0018442:188529-188548 | Msa1366040:intron | 5.0% |
| !!! | CTTAATTTAATATTTTAATT+AGG | - | tig0018442:190113-190132 | None:intergenic | 5.0% |
| CGGTGCCCGCTGTTAAAATA+AGG | - | tig0018442:185513-185532 | None:intergenic | 50.0% | |
| GGAGCCTGTACAATTACAGG+AGG | + | tig0018442:185607-185626 | Msa1366040:CDS | 50.0% | |
| TTATAGTACTGTTCGGGGCG+TGG | + | tig0018442:185648-185667 | Msa1366040:CDS | 50.0% | |
| CCTGGCAAATAGACATCCAC+AGG | - | tig0018442:185685-185704 | None:intergenic | 50.0% | |
| CCTGTGGATGTCTATTTGCC+AGG | + | tig0018442:185682-185701 | Msa1366040:CDS | 50.0% | |
| ATAACGGCTTCCGGTTTAGG+TGG | - | tig0018442:185712-185731 | None:intergenic | 50.0% | |
| CTTGGACGCAGTACTCATAC+CGG | + | tig0018442:185838-185857 | Msa1366040:intron | 50.0% | |
| TGCAGGGTCATTTGTCTGCT+TGG | + | tig0018442:186087-186106 | Msa1366040:intron | 50.0% | |
| GCAATCGAATGCCAATCCTC+GGG | - | tig0018442:186184-186203 | None:intergenic | 50.0% | |
| ! | GGTGCTACATCATAGGCACA+TGG | - | tig0018442:186246-186265 | None:intergenic | 50.0% |
| TGTGCCTATGATGTAGCACC+AGG | + | tig0018442:186246-186265 | Msa1366040:intron | 50.0% | |
| !! | TCCTCCTGGTGCTACATCAT+AGG | - | tig0018442:186253-186272 | None:intergenic | 50.0% |
| TGCCCGAAAGTTGGATAGGA+TGG | + | tig0018442:186480-186499 | Msa1366040:intron | 50.0% | |
| GGCCATCCTATCCAACTTTC+GGG | - | tig0018442:186485-186504 | None:intergenic | 50.0% | |
| ! | TATCTGGGGTTGTCGAAGTG+CGG | - | tig0018442:186584-186603 | None:intergenic | 50.0% |
| GTCACTCCACCATAGTCTGA+TGG | - | tig0018442:187604-187623 | None:intergenic | 50.0% | |
| GGATAGGTGCAGAGACTCAA+TGG | - | tig0018442:187696-187715 | None:intergenic | 50.0% | |
| ! | CGGAAAGAAGGATTTGGCTC+AGG | + | tig0018442:187756-187775 | Msa1366040:intron | 50.0% |
| GGCGAAATTGGTAGACGCTA+CGG | - | tig0018442:187866-187885 | None:intergenic | 50.0% | |
| CTCTAACCTCTGAGCTAAGC+GGG | - | tig0018442:189138-189157 | None:intergenic | 50.0% | |
| GCTCTAACCTCTGAGCTAAG+CGG | - | tig0018442:189139-189158 | None:intergenic | 50.0% | |
| GGCCGTTTACTAGTTAGTCC+TGG | - | tig0018442:189569-189588 | None:intergenic | 50.0% | |
| !! | TGGATTGGCAATTCTTCGCG+GGG | - | tig0018442:189976-189995 | None:intergenic | 50.0% |
| AAGAGAGGGATTCGAACCCT+CGG | + | tig0018442:190329-190348 | Msa1366040:intron | 50.0% | |
| AGTGCTACGCTTCAACCACT+CGG | + | tig0018442:190379-190398 | Msa1366040:intron | 50.0% | |
| ACTTCACCTTCAGCAAGCGT+AGG | - | tig0018442:190841-190860 | None:intergenic | 50.0% | |
| ATGCCGCCTATTGGTACTAG+TGG | - | tig0018442:190988-191007 | None:intergenic | 50.0% | |
| ACTAGTACCAATAGGCGGCA+TGG | + | tig0018442:190987-191006 | Msa1366040:CDS | 50.0% | |
| CTAGTACCAATAGGCGGCAT+GGG | + | tig0018442:190988-191007 | Msa1366040:CDS | 50.0% | |
| TAGTACCAATAGGCGGCATG+GGG | + | tig0018442:190989-191008 | Msa1366040:CDS | 50.0% | |
| GTCCGATCCCGATAAGAAAG+AGG | - | tig0018442:191072-191091 | None:intergenic | 50.0% | |
| !! | TCTCACGTACGGTTCTGGAA+CGG | + | tig0018442:191395-191414 | Msa1366040:CDS | 50.0% |
| GAACCGAATGACGACCGTAA+CGG | + | tig0018442:191426-191445 | Msa1366040:CDS | 50.0% | |
| CATCCGTTACGGTCGTCATT+CGG | - | tig0018442:191432-191451 | None:intergenic | 50.0% | |
| ACGGATGTCGCTCAATCTGA+AGG | + | tig0018442:191445-191464 | Msa1366040:CDS | 50.0% | |
| GCCTATGATGTAGCACCAGG+AGG | + | tig0018442:186249-186268 | Msa1366040:intron | 55.0% | |
| CGCCGGAACCAGATTTGAAC+TGG | + | tig0018442:187247-187266 | Msa1366040:intron | 55.0% | |
| AATGGTCGGGATAGCTCAGC+CGG | - | tig0018442:187303-187322 | None:intergenic | 55.0% | |
| ! | GGATTGGCAATTCTTCGCGG+GGG | - | tig0018442:189975-189994 | None:intergenic | 55.0% |
| GAGTGGTTGAAGCGTAGCAC+TGG | - | tig0018442:190380-190399 | None:intergenic | 55.0% | |
| ATGTAGGAGAGATGGCCGAG+TGG | - | tig0018442:190397-190416 | None:intergenic | 55.0% | |
| AGTACCAATAGGCGGCATGG+GGG | + | tig0018442:190990-191009 | Msa1366040:CDS | 55.0% | |
| !! | GGGGAAGAAGCACTACGCTT+AGG | + | tig0018442:191009-191028 | Msa1366040:CDS | 55.0% |
| TGGTACCACGGTCGAGTCCT+AGG | + | tig0018442:185479-185498 | Msa1366040:CDS | 60.0% | |
| GCCAGGCTGTCCACCTAAAC+CGG | + | tig0018442:185699-185718 | Msa1366040:CDS | 60.0% | |
| TCCGGTTTAGGTGGACAGCC+TGG | - | tig0018442:185703-185722 | None:intergenic | 60.0% | |
| TAGCTCAGCCGGTAGAGCAG+AGG | - | tig0018442:187292-187311 | None:intergenic | 60.0% | |
| TGAGAGCCCGCTTAGCTCAG+AGG | + | tig0018442:189129-189148 | Msa1366040:intron | 60.0% | |
| ! | ACGTCGTCTGGGGCTTTACC+AGG | + | tig0018442:189548-189567 | Msa1366040:CDS | 60.0% |
| TCTTCCCCCATGCCGCCTAT+TGG | - | tig0018442:190997-191016 | None:intergenic | 60.0% | |
| ACCACGGTCGAGTCCTAGGC+AGG | + | tig0018442:185483-185502 | Msa1366040:CDS | 65.0% | |
| GCCTGCCTAGGACTCGACCG+TGG | - | tig0018442:185487-185506 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018442 | gene | 185292 | 191498 | 185292 | ID=Msa1366040;Name=Msa1366040 |
| tig0018442 | mRNA | 185292 | 191498 | 185292 | ID=Msa1366040-mRNA-1;Parent=Msa1366040;Name=Msa1366040-mRNA-1;_AED=0.71;_eAED=0.71;_QI=0|0|0|0.16|1|1|6|0|337 |
| tig0018442 | exon | 185292 | 185751 | 185292 | ID=Msa1366040-mRNA-1:exon:14916;Parent=Msa1366040-mRNA-1 |
| tig0018442 | exon | 186262 | 186332 | 186262 | ID=Msa1366040-mRNA-1:exon:14917;Parent=Msa1366040-mRNA-1 |
| tig0018442 | exon | 187763 | 187827 | 187763 | ID=Msa1366040-mRNA-1:exon:14918;Parent=Msa1366040-mRNA-1 |
| tig0018442 | exon | 189529 | 189739 | 189529 | ID=Msa1366040-mRNA-1:exon:14919;Parent=Msa1366040-mRNA-1 |
| tig0018442 | exon | 190973 | 191053 | 190973 | ID=Msa1366040-mRNA-1:exon:14920;Parent=Msa1366040-mRNA-1 |
| tig0018442 | exon | 191373 | 191498 | 191373 | ID=Msa1366040-mRNA-1:exon:14921;Parent=Msa1366040-mRNA-1 |
| tig0018442 | CDS | 185292 | 185751 | 185292 | ID=Msa1366040-mRNA-1:cds;Parent=Msa1366040-mRNA-1 |
| tig0018442 | CDS | 186262 | 186332 | 186262 | ID=Msa1366040-mRNA-1:cds;Parent=Msa1366040-mRNA-1 |
| tig0018442 | CDS | 187763 | 187827 | 187763 | ID=Msa1366040-mRNA-1:cds;Parent=Msa1366040-mRNA-1 |
| tig0018442 | CDS | 189529 | 189739 | 189529 | ID=Msa1366040-mRNA-1:cds;Parent=Msa1366040-mRNA-1 |
| tig0018442 | CDS | 190973 | 191053 | 190973 | ID=Msa1366040-mRNA-1:cds;Parent=Msa1366040-mRNA-1 |
| tig0018442 | CDS | 191373 | 191498 | 191373 | ID=Msa1366040-mRNA-1:cds;Parent=Msa1366040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
