Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366050 | YP_009141600.1 | 100.000 | 201 | 0 | 0 | 1 | 201 | 1 | 201 | 3.55e-143 | 407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366050 | sp|Q9BBT5|RR4_LOTJA | 95.522 | 201 | 9 | 0 | 1 | 201 | 1 | 201 | 8.95e-140 | 391 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366050 | A0A0F6NLD0 | 100.000 | 201 | 0 | 0 | 1 | 201 | 1 | 201 | 1.70e-143 | 407 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030710 | Msa1366050 | 0.816310 | 5.906476e-52 | -8.615850e-47 |
| Msa0067820 | Msa1366050 | 0.802566 | 5.278161e-49 | -8.615850e-47 |
| Msa0078110 | Msa1366050 | 0.803761 | 2.988197e-49 | -8.615850e-47 |
| Msa0095150 | Msa1366050 | 0.838533 | 2.717265e-57 | -8.615850e-47 |
| Msa0095170 | Msa1366050 | 0.848901 | 4.560539e-60 | -8.615850e-47 |
| Msa0095190 | Msa1366050 | 0.841149 | 5.660834e-58 | -8.615850e-47 |
| Msa0095210 | Msa1366050 | 0.859053 | 5.395457e-63 | -8.615850e-47 |
| Msa0095290 | Msa1366050 | 0.856430 | 3.235402e-62 | -8.615850e-47 |
| Msa1351380 | Msa1366050 | 0.803305 | 3.715176e-49 | -8.615850e-47 |
| Msa1354320 | Msa1366050 | 0.848605 | 5.510553e-60 | -8.615850e-47 |
| Msa1354330 | Msa1366050 | 0.846763 | 1.770837e-59 | -8.615850e-47 |
| Msa1354340 | Msa1366050 | 0.829533 | 4.880774e-55 | -8.615850e-47 |
| Msa1354350 | Msa1366050 | 0.913136 | 8.725486e-84 | -8.615850e-47 |
| Msa1354380 | Msa1366050 | 0.897747 | 1.041436e-76 | -8.615850e-47 |
| Msa1354390 | Msa1366050 | 0.907497 | 4.755211e-81 | -8.615850e-47 |
| Msa1354860 | Msa1366050 | 0.808037 | 3.769856e-50 | -8.615850e-47 |
| Msa1354880 | Msa1366050 | 0.856223 | 3.720018e-62 | -8.615850e-47 |
| Msa1354900 | Msa1366050 | 0.866999 | 1.890353e-65 | -8.615850e-47 |
| Msa1354910 | Msa1366050 | 0.827069 | 1.917316e-54 | -8.615850e-47 |
| Msa1354920 | Msa1366050 | 0.844591 | 6.874427e-59 | -8.615850e-47 |
| Msa1354930 | Msa1366050 | 0.849309 | 3.511807e-60 | -8.615850e-47 |
| Msa1354940 | Msa1366050 | 0.808149 | 3.568740e-50 | -8.615850e-47 |
| Msa1354950 | Msa1366050 | 0.907191 | 6.615170e-81 | -8.615850e-47 |
| Msa1355050 | Msa1366050 | 0.858299 | 9.065275e-63 | -8.615850e-47 |
| Msa1355070 | Msa1366050 | 0.845879 | 3.084302e-59 | -8.615850e-47 |
| Msa1355080 | Msa1366050 | 0.826456 | 2.686459e-54 | -8.615850e-47 |
| Msa1355090 | Msa1366050 | 0.843801 | 1.120409e-58 | -8.615850e-47 |
| Msa1355100 | Msa1366050 | 0.850642 | 1.488024e-60 | -8.615850e-47 |
| Msa1366000 | Msa1366050 | 0.851152 | 1.069141e-60 | -8.615850e-47 |
| Msa1366010 | Msa1366050 | 0.924690 | 5.024798e-90 | -8.615850e-47 |
| Msa1366040 | Msa1366050 | 0.849454 | 3.200101e-60 | -8.615850e-47 |
| Msa1366050 | Msa1368270 | 0.907560 | 4.442655e-81 | -8.615850e-47 |
| Msa1366050 | Msa1368280 | 0.884140 | 2.471960e-71 | -8.615850e-47 |
| Msa1366050 | Msa1368290 | 0.900998 | 4.174969e-78 | -8.615850e-47 |
| Msa1366050 | Msa1368300 | 0.909517 | 5.216283e-82 | -8.615850e-47 |
| Msa1366050 | Msa1368310 | 0.840177 | 1.017300e-57 | -8.615850e-47 |
| Msa1366050 | Msa1374610 | 0.810448 | 1.146726e-50 | -8.615850e-47 |
| Msa1366050 | Msa1380570 | 0.857796 | 1.278559e-62 | -8.615850e-47 |
| Msa1366050 | Msa1380590 | 0.840013 | 1.122617e-57 | -8.615850e-47 |
| Msa1366050 | Msa1380600 | 0.833877 | 4.142037e-56 | -8.615850e-47 |
| Msa1366050 | Msa1380610 | 0.845100 | 5.012151e-59 | -8.615850e-47 |
| Msa1366050 | Msa1380620 | 0.846384 | 2.246247e-59 | -8.615850e-47 |
| Msa1366050 | Msa1380640 | 0.903660 | 2.755852e-79 | -8.615850e-47 |
| Msa1366050 | Msa1380650 | 0.842020 | 3.336408e-58 | -8.615850e-47 |
| Msa1366050 | Msa1380680 | 0.807474 | 4.966693e-50 | -8.615850e-47 |
| Msa1366050 | Msa1380690 | 0.809939 | 1.476339e-50 | -8.615850e-47 |
| Msa1366050 | Msa1380710 | 0.883534 | 4.136431e-71 | -8.615850e-47 |
| Msa1366050 | Msa1385370 | 0.856578 | 2.926848e-62 | -8.615850e-47 |
| Msa1366050 | Msa1385380 | 0.832384 | 9.748600e-56 | -8.615850e-47 |
| Msa1366050 | Msa1389990 | 0.803160 | 3.979335e-49 | -8.615850e-47 |
| Msa1366050 | Msa1394030 | 0.833466 | 5.247985e-56 | -8.615850e-47 |
| Msa1366050 | Msa1394040 | 0.851726 | 7.356646e-61 | -8.615850e-47 |
| Msa1366050 | Msa1394060 | 0.872256 | 3.655717e-67 | -8.615850e-47 |
| Msa1366050 | Msa1394130 | 0.861680 | 8.656596e-64 | -8.615850e-47 |
| Msa1366050 | Msa1394150 | 0.837918 | 3.915157e-57 | -8.615850e-47 |
| Msa1366050 | Msa1394160 | 0.854939 | 8.809867e-62 | -8.615850e-47 |
| Msa1366050 | Msa1394210 | 0.836895 | 7.157597e-57 | -8.615850e-47 |
| Msa1366050 | Msa1394220 | 0.851476 | 8.658998e-61 | -8.615850e-47 |
| Msa1366050 | Msa1394230 | 0.863476 | 2.423571e-64 | -8.615850e-47 |
| Msa1366050 | Msa1394250 | 0.874465 | 6.612124e-68 | -8.615850e-47 |
| Msa1366050 | Msa1398700 | 0.825181 | 5.392465e-54 | -8.615850e-47 |
| Msa1366050 | Msa1398710 | 0.808109 | 3.639870e-50 | -8.615850e-47 |
| Msa1366050 | Msa1398720 | 0.878914 | 1.909164e-69 | -8.615850e-47 |
| Msa1366050 | Msa1400330 | 0.816979 | 4.182089e-52 | -8.615850e-47 |
| Msa1366050 | Msa1402340 | 0.801190 | 1.011897e-48 | -8.615850e-47 |
| Msa0616570 | Msa1366050 | 0.804692 | 1.912479e-49 | -8.615850e-47 |
| Msa0699900 | Msa1366050 | 0.809367 | 1.959727e-50 | -8.615850e-47 |
| Msa0704750 | Msa1366050 | 0.800697 | 1.276415e-48 | -8.615850e-47 |
| Msa0708120 | Msa1366050 | 0.814579 | 1.433655e-51 | -8.615850e-47 |
| Msa0807840 | Msa1366050 | 0.803029 | 4.236959e-49 | -8.615850e-47 |
| Msa0124070 | Msa1366050 | 0.802029 | 6.811217e-49 | -8.615850e-47 |
| Msa0139800 | Msa1366050 | 0.825396 | 4.795988e-54 | -8.615850e-47 |
| Msa0139810 | Msa1366050 | 0.827217 | 1.767716e-54 | -8.615850e-47 |
| Msa0141090 | Msa1366050 | 0.836493 | 9.061534e-57 | -8.615850e-47 |
| Msa0147070 | Msa1366050 | 0.800006 | 1.764574e-48 | -8.615850e-47 |
| Msa0170550 | Msa1366050 | 0.800784 | 1.224966e-48 | -8.615850e-47 |
| Msa0173880 | Msa1366050 | 0.856029 | 4.239632e-62 | -8.615850e-47 |
| Msa0186750 | Msa1366050 | 0.804457 | 2.140427e-49 | -8.615850e-47 |
| Msa0202640 | Msa1366050 | 0.865110 | 7.488127e-65 | -8.615850e-47 |
| Msa0221840 | Msa1366050 | 0.838556 | 2.680717e-57 | -8.615850e-47 |
| Msa0225050 | Msa1366050 | 0.801806 | 7.567323e-49 | -8.615850e-47 |
| Msa1236990 | Msa1366050 | 0.801203 | 1.006080e-48 | -8.615850e-47 |
| Msa1264300 | Msa1366050 | 0.814274 | 1.674659e-51 | -8.615850e-47 |
| Msa1269400 | Msa1366050 | 0.866005 | 3.909963e-65 | -8.615850e-47 |
| Msa1269410 | Msa1366050 | 0.837662 | 4.553757e-57 | -8.615850e-47 |
| Msa1269420 | Msa1366050 | 0.873665 | 1.232851e-67 | -8.615850e-47 |
| Msa1305090 | Msa1366050 | 0.830223 | 3.314263e-55 | -8.615850e-47 |
| Msa1317340 | Msa1366050 | 0.809952 | 1.467361e-50 | -8.615850e-47 |
| Msa1334350 | Msa1366050 | 0.801634 | 8.207075e-49 | -8.615850e-47 |
| Msa0370210 | Msa1366050 | 0.828140 | 1.060857e-54 | -8.615850e-47 |
| Msa0374840 | Msa1366050 | 0.835134 | 2.002226e-56 | -8.615850e-47 |
| Msa0375100 | Msa1366050 | 0.832881 | 7.338471e-56 | -8.615850e-47 |
| Msa0398630 | Msa1366050 | 0.818140 | 2.289929e-52 | -8.615850e-47 |
| Msa0449920 | Msa1366050 | 0.839728 | 1.332084e-57 | -8.615850e-47 |
| Msa0470330 | Msa1366050 | 0.807426 | 5.083177e-50 | -8.615850e-47 |
| Msa0470850 | Msa1366050 | 0.819842 | 9.391843e-53 | -8.615850e-47 |
| Msa0983680 | Msa1366050 | 0.801303 | 9.593884e-49 | -8.615850e-47 |
| Msa0983700 | Msa1366050 | 0.856234 | 3.691759e-62 | -8.615850e-47 |
| Msa0983720 | Msa1366050 | 0.853831 | 1.842550e-61 | -8.615850e-47 |
| Msa1044520 | Msa1366050 | 0.809486 | 1.847950e-50 | -8.615850e-47 |
| Msa1064410 | Msa1366050 | 0.817015 | 4.105873e-52 | -8.615850e-47 |
| Msa1084630 | Msa1366050 | 0.815254 | 1.015951e-51 | -8.615850e-47 |
| Msa1086050 | Msa1366050 | 0.863791 | 1.934731e-64 | -8.615850e-47 |
| Msa1086070 | Msa1366050 | 0.860053 | 2.699481e-63 | -8.615850e-47 |
| Msa1086080 | Msa1366050 | 0.821521 | 3.863611e-53 | -8.615850e-47 |
| Msa1086090 | Msa1366050 | 0.836251 | 1.043991e-56 | -8.615850e-47 |
| Msa1086100 | Msa1366050 | 0.850377 | 1.765993e-60 | -8.615850e-47 |
| Msa1086140 | Msa1366050 | 0.866485 | 2.753979e-65 | -8.615850e-47 |
| Msa1086150 | Msa1366050 | 0.848492 | 5.920089e-60 | -8.615850e-47 |
| Msa1086180 | Msa1366050 | 0.858354 | 8.728888e-63 | -8.615850e-47 |
| Msa1086190 | Msa1366050 | 0.822004 | 2.986214e-53 | -8.615850e-47 |
| Msa1086200 | Msa1366050 | 0.837975 | 3.784515e-57 | -8.615850e-47 |
| Msa1086210 | Msa1366050 | 0.834008 | 3.842658e-56 | -8.615850e-47 |
| Msa1086250 | Msa1366050 | 0.842324 | 2.772228e-58 | -8.615850e-47 |
| Msa1086260 | Msa1366050 | 0.810904 | 9.139696e-51 | -8.615850e-47 |
| Msa1086270 | Msa1366050 | 0.839630 | 1.412832e-57 | -8.615850e-47 |
| Msa1086280 | Msa1366050 | 0.864325 | 1.318455e-64 | -8.615850e-47 |
| Msa1086300 | Msa1366050 | 0.855808 | 4.920498e-62 | -8.615850e-47 |
| Msa1086360 | Msa1366050 | 0.860607 | 1.835662e-63 | -8.615850e-47 |
| Msa1086380 | Msa1366050 | 0.857586 | 1.475518e-62 | -8.615850e-47 |
| Msa1086430 | Msa1366050 | 0.852357 | 4.869610e-61 | -8.615850e-47 |
| Msa1086450 | Msa1366050 | 0.870165 | 1.792816e-66 | -8.615850e-47 |
| Msa1086470 | Msa1366050 | 0.867669 | 1.153742e-65 | -8.615850e-47 |
| Msa1086660 | Msa1366050 | 0.867835 | 1.020706e-65 | -8.615850e-47 |
| Msa1086860 | Msa1366050 | 0.867260 | 1.559815e-65 | -8.615850e-47 |
| Msa1086880 | Msa1366050 | 0.861295 | 1.134064e-63 | -8.615850e-47 |
| Msa1086890 | Msa1366050 | 0.825021 | 5.882631e-54 | -8.615850e-47 |
| Msa1086900 | Msa1366050 | 0.841819 | 3.771549e-58 | -8.615850e-47 |
| Msa1086910 | Msa1366050 | 0.854232 | 1.411366e-61 | -8.615850e-47 |
| Msa1091700 | Msa1366050 | 0.845467 | 3.987622e-59 | -8.615850e-47 |
| Msa0268170 | Msa1366050 | 0.857850 | 1.231907e-62 | -8.615850e-47 |
| Msa0268190 | Msa1366050 | 0.862020 | 6.809845e-64 | -8.615850e-47 |
| Msa0268300 | Msa1366050 | 0.808290 | 3.330273e-50 | -8.615850e-47 |
| Msa0268350 | Msa1366050 | 0.801367 | 9.311411e-49 | -8.615850e-47 |
| Msa0268370 | Msa1366050 | 0.864852 | 9.026102e-65 | -8.615850e-47 |
| Msa0268390 | Msa1366050 | 0.855008 | 8.415375e-62 | -8.615850e-47 |
| Msa0268400 | Msa1366050 | 0.842301 | 2.811268e-58 | -8.615850e-47 |
| Msa0268410 | Msa1366050 | 0.866436 | 2.855865e-65 | -8.615850e-47 |
| Msa0268430 | Msa1366050 | 0.860596 | 1.850368e-63 | -8.615850e-47 |
| Msa0268530 | Msa1366050 | 0.850707 | 1.427054e-60 | -8.615850e-47 |
| Msa0268550 | Msa1366050 | 0.867070 | 1.794739e-65 | -8.615850e-47 |
| Msa0268560 | Msa1366050 | 0.837556 | 4.847687e-57 | -8.615850e-47 |
| Msa0268570 | Msa1366050 | 0.840956 | 6.360600e-58 | -8.615850e-47 |
| Msa0268580 | Msa1366050 | 0.856223 | 3.719445e-62 | -8.615850e-47 |
| Msa0268610 | Msa1366050 | 0.801565 | 8.480118e-49 | -8.615850e-47 |
| Msa0268630 | Msa1366050 | 0.853916 | 1.741576e-61 | -8.615850e-47 |
| Msa0268640 | Msa1366050 | 0.859423 | 4.178730e-63 | -8.615850e-47 |
| Msa0268660 | Msa1366050 | 0.817147 | 3.835166e-52 | -8.615850e-47 |
| Msa0268720 | Msa1366050 | 0.869902 | 2.185701e-66 | -8.615850e-47 |
| Msa0268740 | Msa1366050 | 0.846470 | 2.128729e-59 | -8.615850e-47 |
| Msa0268750 | Msa1366050 | 0.847029 | 1.496926e-59 | -8.615850e-47 |
| Msa0268760 | Msa1366050 | 0.823093 | 1.667478e-53 | -8.615850e-47 |
| Msa0268830 | Msa1366050 | 0.855360 | 6.648334e-62 | -8.615850e-47 |
| Msa0268840 | Msa1366050 | 0.854758 | 9.946258e-62 | -8.615850e-47 |
| Msa0268860 | Msa1366050 | 0.859210 | 4.841188e-63 | -8.615850e-47 |
| Msa0268920 | Msa1366050 | 0.855230 | 7.250935e-62 | -8.615850e-47 |
| Msa0268940 | Msa1366050 | 0.858823 | 6.320846e-63 | -8.615850e-47 |
| Msa0268950 | Msa1366050 | 0.832553 | 8.851770e-56 | -8.615850e-47 |
| Msa0268960 | Msa1366050 | 0.852541 | 4.315214e-61 | -8.615850e-47 |
| Msa0268990 | Msa1366050 | 0.827031 | 1.958152e-54 | -8.615850e-47 |
| Msa0269040 | Msa1366050 | 0.851367 | 9.297535e-61 | -8.615850e-47 |
| Msa0269050 | Msa1366050 | 0.868713 | 5.321431e-66 | -8.615850e-47 |
| Msa0269070 | Msa1366050 | 0.858926 | 5.890916e-63 | -8.615850e-47 |
| Msa0307490 | Msa1366050 | 0.807877 | 4.078407e-50 | -8.615850e-47 |
| Msa0344150 | Msa1366050 | 0.801692 | 7.987019e-49 | -8.615850e-47 |
| Msa0344180 | Msa1366050 | 0.862935 | 3.560790e-64 | -8.615850e-47 |
| Msa0344190 | Msa1366050 | 0.858993 | 5.623713e-63 | -8.615850e-47 |
| Msa0344210 | Msa1366050 | 0.823215 | 1.561296e-53 | -8.615850e-47 |
| Msa0344280 | Msa1366050 | 0.872355 | 3.388442e-67 | -8.615850e-47 |
| Msa0344300 | Msa1366050 | 0.862740 | 4.092475e-64 | -8.615850e-47 |
| Msa0344310 | Msa1366050 | 0.840988 | 6.238450e-58 | -8.615850e-47 |
| Msa0344330 | Msa1366050 | 0.831461 | 1.647721e-55 | -8.615850e-47 |
| Msa1143120 | Msa1366050 | 0.849939 | 2.343345e-60 | -8.615850e-47 |
| Msa1143130 | Msa1366050 | 0.860498 | 1.981523e-63 | -8.615850e-47 |
| Msa1143160 | Msa1366050 | 0.854197 | 1.444961e-61 | -8.615850e-47 |
| Msa1143170 | Msa1366050 | 0.826639 | 2.428885e-54 | -8.615850e-47 |
| Msa1143180 | Msa1366050 | 0.813745 | 2.190820e-51 | -8.615850e-47 |
| Msa1143190 | Msa1366050 | 0.800864 | 1.180035e-48 | -8.615850e-47 |
| Msa1171640 | Msa1366050 | 0.803722 | 3.044219e-49 | -8.615850e-47 |
| Msa1199690 | Msa1366050 | 0.800754 | 1.242443e-48 | -8.615850e-47 |
| Msa0483990 | Msa1366050 | 0.842893 | 1.957688e-58 | -8.615850e-47 |
| Msa0484040 | Msa1366050 | 0.812467 | 4.177210e-51 | -8.615850e-47 |
| Msa0495270 | Msa1366050 | 0.840638 | 7.706049e-58 | -8.615850e-47 |
| Msa0516340 | Msa1366050 | 0.818580 | 1.819983e-52 | -8.615850e-47 |
| Msa0571220 | Msa1366050 | 0.807257 | 5.522083e-50 | -8.615850e-47 |
| Msa0577140 | Msa1366050 | 0.806847 | 6.743282e-50 | -8.615850e-47 |
| Msa0577910 | Msa1366050 | 0.814630 | 1.396816e-51 | -8.615850e-47 |
| Msa0582510 | Msa1366050 | 0.858317 | 8.948980e-63 | -8.615850e-47 |
| Msa0582520 | Msa1366050 | 0.858729 | 6.745766e-63 | -8.615850e-47 |
| Msa0582540 | Msa1366050 | 0.852652 | 4.011792e-61 | -8.615850e-47 |
| Msa0582610 | Msa1366050 | 0.857416 | 1.657356e-62 | -8.615850e-47 |
| Msa0582630 | Msa1366050 | 0.845604 | 3.660752e-59 | -8.615850e-47 |
| Msa0582640 | Msa1366050 | 0.830812 | 2.378787e-55 | -8.615850e-47 |
| Msa0582650 | Msa1366050 | 0.843011 | 1.820751e-58 | -8.615850e-47 |
| Msa0582660 | Msa1366050 | 0.842256 | 2.889344e-58 | -8.615850e-47 |
| Msa0582690 | Msa1366050 | 0.860540 | 1.923965e-63 | -8.615850e-47 |
| Msa0582700 | Msa1366050 | 0.872811 | 2.387629e-67 | -8.615850e-47 |
| Msa0582720 | Msa1366050 | 0.865957 | 4.048789e-65 | -8.615850e-47 |
| Msa0582730 | Msa1366050 | 0.833064 | 6.609492e-56 | -8.615850e-47 |
| Msa0582750 | Msa1366050 | 0.862741 | 4.089335e-64 | -8.615850e-47 |
| Msa0582760 | Msa1366050 | 0.842363 | 2.707480e-58 | -8.615850e-47 |
| Msa0582770 | Msa1366050 | 0.843260 | 1.562724e-58 | -8.615850e-47 |
| Msa0582780 | Msa1366050 | 0.846145 | 2.609617e-59 | -8.615850e-47 |
| Msa0582810 | Msa1366050 | 0.852482 | 4.485230e-61 | -8.615850e-47 |
| Msa0582820 | Msa1366050 | 0.861322 | 1.113127e-63 | -8.615850e-47 |
| Msa0582840 | Msa1366050 | 0.848477 | 5.979540e-60 | -8.615850e-47 |
| Msa0582890 | Msa1366050 | 0.858086 | 1.048689e-62 | -8.615850e-47 |
| Msa0582910 | Msa1366050 | 0.855435 | 6.321484e-62 | -8.615850e-47 |
| Msa0582920 | Msa1366050 | 0.848124 | 7.484602e-60 | -8.615850e-47 |
| Msa0582930 | Msa1366050 | 0.822340 | 2.495904e-53 | -8.615850e-47 |
| Msa0591370 | Msa1366050 | 0.805064 | 1.599032e-49 | -8.615850e-47 |
| Msa0591380 | Msa1366050 | 0.824710 | 6.963815e-54 | -8.615850e-47 |
| Msa0867640 | Msa1366050 | 0.882727 | 8.170426e-71 | -8.615850e-47 |
| Msa0867650 | Msa1366050 | 0.843787 | 1.130100e-58 | -8.615850e-47 |
| Msa0883880 | Msa1366050 | 0.817501 | 3.191782e-52 | -8.615850e-47 |
| Msa0908480 | Msa1366050 | 0.804556 | 2.041302e-49 | -8.615850e-47 |
| Msa0924850 | Msa1366050 | 0.847479 | 1.126939e-59 | -8.615850e-47 |
| Msa0924870 | Msa1366050 | 0.829794 | 4.217564e-55 | -8.615850e-47 |
| Msa0924880 | Msa1366050 | 0.847725 | 9.641348e-60 | -8.615850e-47 |
| Msa0924890 | Msa1366050 | 0.803939 | 2.744348e-49 | -8.615850e-47 |
| Msa0924990 | Msa1366050 | 0.873386 | 1.530745e-67 | -8.615850e-47 |
| Msa0925040 | Msa1366050 | 0.868233 | 7.604656e-66 | -8.615850e-47 |
| Msa0931070 | Msa1366050 | 0.854996 | 8.481672e-62 | -8.615850e-47 |
| Msa0931080 | Msa1366050 | 0.859316 | 4.499597e-63 | -8.615850e-47 |
| Msa0931100 | Msa1366050 | 0.861861 | 7.616095e-64 | -8.615850e-47 |
| Msa0931110 | Msa1366050 | 0.834159 | 3.522154e-56 | -8.615850e-47 |
| Msa0931130 | Msa1366050 | 0.865966 | 4.022526e-65 | -8.615850e-47 |
| Msa0931140 | Msa1366050 | 0.854041 | 1.603103e-61 | -8.615850e-47 |
| Msa0931160 | Msa1366050 | 0.855118 | 7.819787e-62 | -8.615850e-47 |
| Msa0931190 | Msa1366050 | 0.861507 | 9.770847e-64 | -8.615850e-47 |
| Msa0931210 | Msa1366050 | 0.858355 | 8.722944e-63 | -8.615850e-47 |
| Msa0931220 | Msa1366050 | 0.815904 | 7.277034e-52 | -8.615850e-47 |
| Msa0931230 | Msa1366050 | 0.838520 | 2.739428e-57 | -8.615850e-47 |
| Msa0931240 | Msa1366050 | 0.853913 | 1.745291e-61 | -8.615850e-47 |
| Msa0931260 | Msa1366050 | 0.856182 | 3.825523e-62 | -8.615850e-47 |
| Msa0931270 | Msa1366050 | 0.838613 | 2.591020e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366050 | MtrunA17_Chr7g0229301 | 97.512 | 201 | 5 | 0 | 1 | 201 | 1 | 201 | 1.37e-143 | 398 |
| Msa1366050 | MtrunA17_Chr6g0454441 | 97.512 | 201 | 5 | 0 | 1 | 201 | 1 | 201 | 1.37e-143 | 398 |
| Msa1366050 | MtrunA17_Chr4g0016451 | 97.512 | 201 | 5 | 0 | 1 | 201 | 1 | 201 | 1.37e-143 | 398 |
| Msa1366050 | MtrunA17_Chr6g0466281 | 97.512 | 201 | 5 | 0 | 1 | 201 | 1 | 201 | 1.37e-143 | 398 |
| Msa1366050 | MtrunA17_CPg0493311 | 97.512 | 201 | 5 | 0 | 1 | 201 | 1 | 201 | 1.37e-143 | 398 |
| Msa1366050 | MtrunA17_Chr7g0229661 | 84.080 | 201 | 13 | 1 | 1 | 201 | 1 | 182 | 1.89e-115 | 327 |
| Msa1366050 | MtrunA17_Chr4g0015291 | 97.436 | 156 | 4 | 0 | 1 | 156 | 1 | 156 | 3.32e-108 | 307 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366050 | ATCG00380.1 | 88.060 | 201 | 24 | 0 | 1 | 201 | 1 | 201 | 2.12e-126 | 355 |
Find 33 sgRNAs with CRISPR-Local
Find 43 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAAATAATAGATAGTAAA+TGG | 0.189787 | tig0018442:-194498 | Msa1366050:CDS |
| GATTGACTAATCCTTTATAT+TGG | 0.284280 | tig0018442:+194518 | None:intergenic |
| CTTGATCCATTCCAATATAA+AGG | 0.291752 | tig0018442:-194529 | Msa1366050:CDS |
| CTTAAATACGTTCGTATCGC+TGG | 0.342652 | tig0018442:-194829 | Msa1366050:CDS |
| ACAATTACTTGAAATGCGTT+TGG | 0.359489 | tig0018442:-194773 | Msa1366050:CDS |
| TTTGAAAATTAATGAATTGC+TGG | 0.365999 | tig0018442:-194470 | Msa1366050:CDS |
| ATGGATTGGCAATTCTTCGC+GGG | 0.450528 | tig0018442:+194558 | None:intergenic |
| TACCAGGACTAACTAGTAAA+CGG | 0.463029 | tig0018442:-194972 | Msa1366050:CDS |
| TGAGGTTTGCAACGATAACT+TGG | 0.468099 | tig0018442:+194649 | None:intergenic |
| ACTAATCCTTTATATTGGAA+TGG | 0.475526 | tig0018442:+194523 | None:intergenic |
| GTCTGTGGTTAACTAATTGA+CGG | 0.477609 | tig0018442:+194704 | None:intergenic |
| TCAAATAATAGATAGTAAAT+GGG | 0.487910 | tig0018442:-194497 | Msa1366050:CDS |
| ATAATAGATAGTAAATGGGT+TGG | 0.504615 | tig0018442:-194493 | Msa1366050:CDS |
| CTAAGTTCGCTTCCAACTGT+AGG | 0.508663 | tig0018442:+194949 | None:intergenic |
| GGATCAAGAGTCAAATGGAT+TGG | 0.511159 | tig0018442:+194544 | None:intergenic |
| GGAAAAGCGAAAGGTTCAAC+CGG | 0.516182 | tig0018442:-194808 | Msa1366050:CDS |
| TCTGTGGTTAACTAATTGAC+GGG | 0.521261 | tig0018442:+194705 | None:intergenic |
| GGCCGTTTACTAGTTAGTCC+TGG | 0.527000 | tig0018442:+194970 | None:intergenic |
| AATGGATTGGCAATTCTTCG+CGG | 0.545268 | tig0018442:+194557 | None:intergenic |
| TCAAGATATTATTACAGCGA+AGG | 0.559737 | tig0018442:-194629 | Msa1366050:CDS |
| TTCGCTGTAATAATATCTTG+AGG | 0.560954 | tig0018442:+194631 | None:intergenic |
| TAATTGTAGTAAAACTTGAC+CGG | 0.568250 | tig0018442:+194789 | None:intergenic |
| ACTAGTAAACGGCCTACAGT+TGG | 0.568372 | tig0018442:-194961 | Msa1366050:CDS |
| CAAGATATTATTACAGCGAA+GGG | 0.569002 | tig0018442:-194628 | Msa1366050:CDS |
| TTAACTAATTGACGGGCTTG+AGG | 0.581554 | tig0018442:+194712 | None:intergenic |
| GGAATGGATCAAGAGTCAAA+TGG | 0.582974 | tig0018442:+194539 | None:intergenic |
| GATTGGCAATTCTTCGCGGG+GGG | 0.584547 | tig0018442:+194561 | None:intergenic |
| TGGATTGGCAATTCTTCGCG+GGG | 0.610754 | tig0018442:+194559 | None:intergenic |
| TGTTTATGTCACGTTACAGA+GGG | 0.632465 | tig0018442:-195029 | None:intergenic |
| GTGTTTATGTCACGTTACAG+AGG | 0.633128 | tig0018442:-195030 | None:intergenic |
| CGTATCGCTGGAAAAGCGAA+AGG | 0.633501 | tig0018442:-194817 | Msa1366050:CDS |
| CATTAACTAAAACATGTCTG+TGG | 0.663264 | tig0018442:+194689 | None:intergenic |
| GGATTGGCAATTCTTCGCGG+GGG | 0.681198 | tig0018442:+194560 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAAATAATAGATAGTAAA+TGG | - | tig0018442:194967-194986 | Msa1366050:CDS | 15.0% |
| !! | TCAAATAATAGATAGTAAAT+GGG | - | tig0018442:194968-194987 | Msa1366050:CDS | 15.0% |
| !! | TTTGAAAATTAATGAATTGC+TGG | - | tig0018442:194995-195014 | Msa1366050:CDS | 20.0% |
| !! | CAAAAATTGCGTTTTCATTA+TGG | - | tig0018442:194594-194613 | Msa1366050:CDS | 25.0% |
| ! | TAATTGTAGTAAAACTTGAC+CGG | + | tig0018442:194679-194698 | None:intergenic | 25.0% |
| !!! | GATAACATACTTTTTCGATT+GGG | - | tig0018442:194714-194733 | Msa1366050:CDS | 25.0% |
| ! | ACTAATCCTTTATATTGGAA+TGG | + | tig0018442:194945-194964 | None:intergenic | 25.0% |
| ! | GATTGACTAATCCTTTATAT+TGG | + | tig0018442:194950-194969 | None:intergenic | 25.0% |
| ! | ATAATAGATAGTAAATGGGT+TGG | - | tig0018442:194972-194991 | Msa1366050:CDS | 25.0% |
| TTTCAAAAAAATACGTCGTC+TGG | - | tig0018442:194464-194483 | Msa1366050:CDS | 30.0% | |
| TTCAAAAAAATACGTCGTCT+GGG | - | tig0018442:194465-194484 | Msa1366050:CDS | 30.0% | |
| ACAATTACTTGAAATGCGTT+TGG | - | tig0018442:194692-194711 | Msa1366050:CDS | 30.0% | |
| !!! | GGATAACATACTTTTTCGAT+TGG | - | tig0018442:194713-194732 | Msa1366050:CDS | 30.0% |
| CATTAACTAAAACATGTCTG+TGG | + | tig0018442:194779-194798 | None:intergenic | 30.0% | |
| !!! | CACAGACATGTTTTAGTTAA+TGG | - | tig0018442:194777-194796 | Msa1366050:CDS | 30.0% |
| TTCGCTGTAATAATATCTTG+AGG | + | tig0018442:194837-194856 | None:intergenic | 30.0% | |
| TCAAGATATTATTACAGCGA+AGG | - | tig0018442:194836-194855 | Msa1366050:CDS | 30.0% | |
| CAAGATATTATTACAGCGAA+GGG | - | tig0018442:194837-194856 | Msa1366050:CDS | 30.0% | |
| CTTGATCCATTCCAATATAA+AGG | - | tig0018442:194936-194955 | Msa1366050:CDS | 30.0% | |
| !!! | CGACGTATTTTTTTGAAACG+AGG | + | tig0018442:194462-194481 | None:intergenic | 35.0% |
| TCAAAAAAATACGTCGTCTG+GGG | - | tig0018442:194466-194485 | Msa1366050:CDS | 35.0% | |
| TACCAGGACTAACTAGTAAA+CGG | - | tig0018442:194493-194512 | Msa1366050:CDS | 35.0% | |
| !!! | CATACTTTTTCGATTGGGTA+TGG | - | tig0018442:194719-194738 | Msa1366050:CDS | 35.0% |
| TCTGTGGTTAACTAATTGAC+GGG | + | tig0018442:194763-194782 | None:intergenic | 35.0% | |
| GTCTGTGGTTAACTAATTGA+CGG | + | tig0018442:194764-194783 | None:intergenic | 35.0% | |
| CAAAAAAATACGTCGTCTGG+GGG | - | tig0018442:194467-194486 | Msa1366050:CDS | 40.0% | |
| !!! | ATTTTTTACTCGAGCGCGAT+TGG | + | tig0018442:194545-194564 | None:intergenic | 40.0% |
| CTTAAATACGTTCGTATCGC+TGG | - | tig0018442:194636-194655 | Msa1366050:CDS | 40.0% | |
| !! | TTAACTAATTGACGGGCTTG+AGG | + | tig0018442:194756-194775 | None:intergenic | 40.0% |
| TGAGGTTTGCAACGATAACT+TGG | + | tig0018442:194819-194838 | None:intergenic | 40.0% | |
| !! | AATGGATTGGCAATTCTTCG+CGG | + | tig0018442:194911-194930 | None:intergenic | 40.0% |
| GGATCAAGAGTCAAATGGAT+TGG | + | tig0018442:194924-194943 | None:intergenic | 40.0% | |
| GGAATGGATCAAGAGTCAAA+TGG | + | tig0018442:194929-194948 | None:intergenic | 40.0% | |
| ACTAGTAAACGGCCTACAGT+TGG | - | tig0018442:194504-194523 | Msa1366050:CDS | 45.0% | |
| CTAAGTTCGCTTCCAACTGT+AGG | + | tig0018442:194519-194538 | None:intergenic | 45.0% | |
| GGAAAAGCGAAAGGTTCAAC+CGG | - | tig0018442:194657-194676 | Msa1366050:CDS | 45.0% | |
| !! | ATGGATTGGCAATTCTTCGC+GGG | + | tig0018442:194910-194929 | None:intergenic | 45.0% |
| GGCCGTTTACTAGTTAGTCC+TGG | + | tig0018442:194498-194517 | None:intergenic | 50.0% | |
| CGTATCGCTGGAAAAGCGAA+AGG | - | tig0018442:194648-194667 | Msa1366050:CDS | 50.0% | |
| !! | TGGATTGGCAATTCTTCGCG+GGG | + | tig0018442:194909-194928 | None:intergenic | 50.0% |
| GATTGGCAATTCTTCGCGGG+GGG | + | tig0018442:194907-194926 | None:intergenic | 55.0% | |
| ! | GGATTGGCAATTCTTCGCGG+GGG | + | tig0018442:194908-194927 | None:intergenic | 55.0% |
| CGTCGTCTGGGGGCTTTACC+AGG | - | tig0018442:194477-194496 | Msa1366050:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018442 | gene | 194441 | 195046 | 194441 | ID=Msa1366050;Name=Msa1366050 |
| tig0018442 | mRNA | 194441 | 195046 | 194441 | ID=Msa1366050-mRNA-1;Parent=Msa1366050;Name=Msa1366050-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|201 |
| tig0018442 | exon | 194441 | 195046 | 194441 | ID=Msa1366050-mRNA-1:exon:14937;Parent=Msa1366050-mRNA-1 |
| tig0018442 | CDS | 194441 | 195046 | 194441 | ID=Msa1366050-mRNA-1:cds;Parent=Msa1366050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
