Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0309980 | XP_003593128.2 | 98.585 | 212 | 3 | 0 | 1 | 212 | 1 | 212 | 4.29e-149 | 423 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0309980 | sp|Q9M2C0|VITH4_ARATH | 68.205 | 195 | 58 | 2 | 14 | 207 | 2 | 193 | 3.01e-90 | 266 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0032470 | Msa0309980 | 0.809643 | 1.710116e-50 | -8.615850e-47 |
Msa0053860 | Msa0309980 | 0.817048 | 4.034792e-52 | -8.615850e-47 |
Msa0092410 | Msa0309980 | 0.804224 | 2.393670e-49 | -8.615850e-47 |
Msa0111080 | Msa0309980 | 0.808090 | 3.673099e-50 | -8.615850e-47 |
Msa0125650 | Msa0309980 | 0.810703 | 1.010381e-50 | -8.615850e-47 |
Msa0144530 | Msa0309980 | 0.802156 | 6.413351e-49 | -8.615850e-47 |
Msa0160960 | Msa0309980 | 0.840792 | 7.023688e-58 | -8.615850e-47 |
Msa0186950 | Msa0309980 | 0.802827 | 4.662565e-49 | -8.615850e-47 |
Msa0187830 | Msa0309980 | 0.811811 | 5.809000e-51 | -8.615850e-47 |
Msa0202800 | Msa0309980 | 0.804175 | 2.450292e-49 | -8.615850e-47 |
Msa0204960 | Msa0309980 | 0.802543 | 5.337944e-49 | -8.615850e-47 |
Msa0231920 | Msa0309980 | 0.838285 | 3.149092e-57 | -8.615850e-47 |
Msa0234090 | Msa0309980 | 0.813593 | 2.365885e-51 | -8.615850e-47 |
Msa0240900 | Msa0309980 | 0.800529 | 1.380858e-48 | -8.615850e-47 |
Msa0269560 | Msa0309980 | 0.806674 | 7.333421e-50 | -8.615850e-47 |
Msa0271220 | Msa0309980 | 0.835661 | 1.473689e-56 | -8.615850e-47 |
Msa0278580 | Msa0309980 | 0.814011 | 1.914229e-51 | -8.615850e-47 |
Msa0309980 | Msa0317960 | 0.819365 | 1.206540e-52 | -8.615850e-47 |
Msa0309980 | Msa0317970 | 0.807356 | 5.261477e-50 | -8.615850e-47 |
Msa0309980 | Msa0321690 | 0.804997 | 1.651141e-49 | -8.615850e-47 |
Msa0309980 | Msa0339910 | 0.805262 | 1.452929e-49 | -8.615850e-47 |
Msa0309980 | Msa0347750 | 0.812391 | 4.342003e-51 | -8.615850e-47 |
Msa0309980 | Msa0382370 | 0.815704 | 8.065943e-52 | -8.615850e-47 |
Msa0309980 | Msa0432160 | 0.833481 | 5.202259e-56 | -8.615850e-47 |
Msa0309980 | Msa0440510 | 0.811873 | 5.631686e-51 | -8.615850e-47 |
Msa0309980 | Msa0476680 | 0.836301 | 1.013773e-56 | -8.615850e-47 |
Msa0309980 | Msa0482940 | 0.814056 | 1.870730e-51 | -8.615850e-47 |
Msa0309980 | Msa0491000 | 0.804090 | 2.552385e-49 | -8.615850e-47 |
Msa0309980 | Msa0518170 | 0.802840 | 4.634089e-49 | -8.615850e-47 |
Msa0309980 | Msa0519160 | 0.801236 | 9.905144e-49 | -8.615850e-47 |
Msa0309980 | Msa0521010 | 0.834785 | 2.451886e-56 | -8.615850e-47 |
Msa0309980 | Msa0566350 | 0.808984 | 2.367080e-50 | -8.615850e-47 |
Msa0309980 | Msa0566750 | 0.816406 | 5.621563e-52 | -8.615850e-47 |
Msa0309980 | Msa0600450 | 0.801988 | 6.945001e-49 | -8.615850e-47 |
Msa0309980 | Msa0640940 | 0.802179 | 6.341612e-49 | -8.615850e-47 |
Msa0309980 | Msa0656000 | 0.813150 | 2.960239e-51 | -8.615850e-47 |
Msa0309980 | Msa0679360 | 0.811806 | 5.824023e-51 | -8.615850e-47 |
Msa0309980 | Msa0708310 | 0.800374 | 1.485349e-48 | -8.615850e-47 |
Msa0309980 | Msa0743930 | 0.803242 | 3.827470e-49 | -8.615850e-47 |
Msa0309980 | Msa0746170 | 0.823305 | 1.487890e-53 | -8.615850e-47 |
Msa0309980 | Msa0746210 | 0.822565 | 2.212597e-53 | -8.615850e-47 |
Msa0309980 | Msa0756380 | 0.800398 | 1.468662e-48 | -8.615850e-47 |
Msa0309980 | Msa0784480 | 0.814488 | 1.502003e-51 | -8.615850e-47 |
Msa0309980 | Msa0816130 | 0.801060 | 1.075978e-48 | -8.615850e-47 |
Msa0309980 | Msa0817460 | 0.811826 | 5.764698e-51 | -8.615850e-47 |
Msa0309980 | Msa0826150 | 0.801785 | 7.642184e-49 | -8.615850e-47 |
Msa0309980 | Msa0835230 | 0.811967 | 5.372221e-51 | -8.615850e-47 |
Msa0309980 | Msa0846860 | 0.803597 | 3.231385e-49 | -8.615850e-47 |
Msa0309980 | Msa0878220 | 0.804511 | 2.085523e-49 | -8.615850e-47 |
Msa0309980 | Msa0894710 | 0.806069 | 9.840095e-50 | -8.615850e-47 |
Msa0309980 | Msa0902830 | 0.809125 | 2.208731e-50 | -8.615850e-47 |
Msa0309980 | Msa0936390 | 0.802858 | 4.594509e-49 | -8.615850e-47 |
Msa0309980 | Msa0960390 | 0.805494 | 1.299378e-49 | -8.615850e-47 |
Msa0309980 | Msa0985180 | 0.810038 | 1.405846e-50 | -8.615850e-47 |
Msa0309980 | Msa0994370 | 0.831446 | 1.661972e-55 | -8.615850e-47 |
Msa0309980 | Msa0994910 | 0.808305 | 3.305635e-50 | -8.615850e-47 |
Msa0309980 | Msa1024680 | 0.802474 | 5.513963e-49 | -8.615850e-47 |
Msa0309980 | Msa1034500 | 0.810361 | 1.197354e-50 | -8.615850e-47 |
Msa0309980 | Msa1042660 | 0.823721 | 1.189167e-53 | -8.615850e-47 |
Msa0309980 | Msa1063420 | 0.824738 | 6.859601e-54 | -8.615850e-47 |
Msa0309980 | Msa1089450 | 0.808372 | 3.198621e-50 | -8.615850e-47 |
Msa0309980 | Msa1089460 | 0.819943 | 8.907745e-53 | -8.615850e-47 |
Msa0309980 | Msa1207310 | 0.804559 | 2.038284e-49 | -8.615850e-47 |
Msa0309980 | Msa1259860 | 0.806527 | 7.878181e-50 | -8.615850e-47 |
Msa0309980 | Msa1270660 | 0.820793 | 5.686420e-53 | -8.615850e-47 |
Msa0309980 | Msa1307180 | 0.816241 | 6.119887e-52 | -8.615850e-47 |
Msa0309980 | Msa1316360 | 0.809398 | 1.930128e-50 | -8.615850e-47 |
Msa0309980 | Msa1335230 | 0.811811 | 5.808251e-51 | -8.615850e-47 |
Msa0309980 | Msa1369920 | -0.818518 | 1.880327e-52 | -8.615850e-47 |
Msa0309980 | Msa1370590 | 0.809369 | 1.957344e-50 | -8.615850e-47 |
Msa0309980 | Msa1384100 | 0.813127 | 2.994829e-51 | -8.615850e-47 |
Msa0309980 | Msa1386890 | 0.801532 | 8.612296e-49 | -8.615850e-47 |
Msa0309980 | Msa1400930 | 0.816617 | 5.041297e-52 | -8.615850e-47 |
Msa0309980 | Msa1407190 | 0.821250 | 4.460731e-53 | -8.615850e-47 |
Msa0309980 | Msa1420270 | 0.801160 | 1.026338e-48 | -8.615850e-47 |
Msa0309980 | Msa1428780 | 0.817229 | 3.674887e-52 | -8.615850e-47 |
Msa0309980 | Msa1432130 | 0.823858 | 1.104705e-53 | -8.615850e-47 |
Msa0309980 | Msa1437730 | 0.839966 | 1.154907e-57 | -8.615850e-47 |
Msa0309980 | Msa1444120 | 0.813531 | 2.442280e-51 | -8.615850e-47 |
Msa0309980 | Msa1454530 | 0.804103 | 2.536674e-49 | -8.615850e-47 |
Msa0309980 | Msa1454570 | 0.814109 | 1.821192e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0309980 | MtrunA17_Chr2g0278621 | 98.585 | 212 | 3 | 0 | 1 | 212 | 1 | 212 | 3.94e-153 | 423 |
Msa0309980 | MtrunA17_Chr6g0479471 | 98.113 | 212 | 4 | 0 | 1 | 212 | 1 | 212 | 2.04e-152 | 421 |
Msa0309980 | MtrunA17_Chr1g0202031 | 69.565 | 184 | 51 | 1 | 29 | 207 | 29 | 212 | 1.36e-85 | 252 |
Msa0309980 | MtrunA17_Chr6g0463641 | 66.154 | 195 | 56 | 2 | 23 | 207 | 11 | 205 | 3.54e-77 | 230 |
Msa0309980 | MtrunA17_Chr4g0050831 | 60.938 | 192 | 66 | 1 | 27 | 209 | 30 | 221 | 2.32e-75 | 226 |
Msa0309980 | MtrunA17_Chr4g0050821 | 60.938 | 192 | 66 | 1 | 27 | 209 | 30 | 221 | 2.47e-75 | 226 |
Msa0309980 | MtrunA17_Chr4g0050841 | 61.579 | 190 | 64 | 1 | 27 | 207 | 30 | 219 | 2.88e-75 | 226 |
Msa0309980 | MtrunA17_Chr4g0050811 | 56.279 | 215 | 83 | 3 | 1 | 209 | 27 | 236 | 2.24e-72 | 219 |
Msa0309980 | MtrunA17_Chr4g0050851 | 52.232 | 224 | 83 | 3 | 11 | 210 | 5 | 228 | 9.52e-64 | 197 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0309980 | AT3G43660.1 | 68.205 | 195 | 58 | 2 | 14 | 207 | 2 | 193 | 3.06e-91 | 266 |
Msa0309980 | AT3G43630.1 | 71.277 | 188 | 50 | 2 | 21 | 207 | 8 | 192 | 1.19e-84 | 249 |
Msa0309980 | AT1G21140.1 | 69.792 | 192 | 54 | 2 | 17 | 207 | 7 | 195 | 2.85e-83 | 246 |
Msa0309980 | AT1G76800.1 | 69.519 | 187 | 53 | 1 | 21 | 207 | 9 | 191 | 2.30e-79 | 236 |
Msa0309980 | AT3G25190.1 | 59.000 | 200 | 67 | 3 | 21 | 207 | 15 | 212 | 1.25e-63 | 197 |
Find 41 sgRNAs with CRISPR-Local
Find 49 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGCTATGTCTCTTACTTT+TGG | 0.225220 | 2_4:+4810668 | Msa0309980:CDS |
AGCCTTGCTTTGTTTGCTTT+TGG | 0.248729 | 2_4:+4810575 | Msa0309980:CDS |
GAAGCAAAGGCAGCATAATA+AGG | 0.258027 | 2_4:-4810455 | None:intergenic |
GGCTCCAACACCCATCATTA+AGG | 0.342144 | 2_4:-4810264 | None:intergenic |
TGTTCTTGGGAAAGCTCCTT+TGG | 0.348881 | 2_4:+4810610 | Msa0309980:CDS |
TTTGGTGAAGTCTTCTTTGA+GGG | 0.356177 | 2_4:+4810628 | Msa0309980:CDS |
GGATTGTTGAGTGCTGTTCT+TGG | 0.377078 | 2_4:+4810596 | Msa0309980:CDS |
GTTAAGACAATGATTCTAAC+AGG | 0.391005 | 2_4:+4810299 | Msa0309980:CDS |
CTCAAAGAGCACAATGGCTT+AGG | 0.396117 | 2_4:+4810198 | Msa0309980:CDS |
TTATTATGCTGCCTTTGCTT+CGG | 0.407157 | 2_4:+4810457 | Msa0309980:CDS |
CTTTGGTGAAGTCTTCTTTG+AGG | 0.408112 | 2_4:+4810627 | Msa0309980:CDS |
GATTGTTGAGTGCTGTTCTT+GGG | 0.419290 | 2_4:+4810597 | Msa0309980:CDS |
GGCGCCTTTGTGCCGCTACT+CGG | 0.427583 | 2_4:+4810497 | Msa0309980:CDS |
CTCAACAGCATCCTTAATGA+TGG | 0.435656 | 2_4:+4810253 | Msa0309980:CDS |
ATGATTCTAACAGGAATTGC+TGG | 0.440222 | 2_4:+4810308 | Msa0309980:CDS |
TAAAGACTATAAGATGAGGT+TGG | 0.456281 | 2_4:+4810532 | Msa0309980:CDS |
AAAAGCGATGGCCGAAGCAA+AGG | 0.483514 | 2_4:-4810468 | None:intergenic |
TAAGATGAGGTTGGGAGTTG+TGG | 0.484406 | 2_4:+4810541 | Msa0309980:CDS |
AAAGACTATAAGATGAGGTT+GGG | 0.489210 | 2_4:+4810533 | Msa0309980:CDS |
GGAATTGCTGGTCTTGTAGC+TGG | 0.491668 | 2_4:+4810320 | Msa0309980:CDS |
TCAAAGAGCACAATGGCTTA+GGG | 0.493819 | 2_4:+4810199 | Msa0309980:CDS |
AAGCAAAGGCAGCATAATAA+GGG | 0.516802 | 2_4:-4810454 | None:intergenic |
GGCGCCGACCGCAAAAGCGA+TGG | 0.528738 | 2_4:-4810480 | None:intergenic |
ATGAGGTTGGGAGTTGTGGT+TGG | 0.534054 | 2_4:+4810545 | Msa0309980:CDS |
GCATCCTTAATGATGGGTGT+TGG | 0.549500 | 2_4:+4810260 | Msa0309980:CDS |
ATCCAAAAGCAAACAAAGCA+AGG | 0.566512 | 2_4:-4810577 | None:intergenic |
AAGGCAGCATAATAAGGGTT+AGG | 0.567356 | 2_4:-4810449 | None:intergenic |
CGCGCCGAGTAGCGGCACAA+AGG | 0.568749 | 2_4:-4810501 | None:intergenic |
GGTGCATGTAGCATGGCAAT+TGG | 0.569674 | 2_4:+4810341 | Msa0309980:CDS |
TCAACAGCATCCTTAATGAT+GGG | 0.587391 | 2_4:+4810254 | Msa0309980:CDS |
ACAAACGCCGCGCCGAGTAG+CGG | 0.601438 | 2_4:-4810509 | None:intergenic |
TTGTTAAAGACTATAAGATG+AGG | 0.623966 | 2_4:+4810528 | Msa0309980:CDS |
CTCAAAGAAGACTTCACCAA+AGG | 0.626739 | 2_4:-4810626 | None:intergenic |
TGTAGCTGGTGCATGTAGCA+TGG | 0.629799 | 2_4:+4810334 | Msa0309980:CDS |
CTTTGTGCCGCTACTCGGCG+CGG | 0.645709 | 2_4:+4810502 | Msa0309980:CDS |
TACGTGCTAGTGTAGCTGCA+TGG | 0.662565 | 2_4:-4810106 | None:intergenic |
ATTATACTCAAAGAGCACAA+TGG | 0.665811 | 2_4:+4810192 | Msa0309980:CDS |
TGAATCAAAAGTGTACAACA+TGG | 0.690093 | 2_4:+4810130 | Msa0309980:CDS |
TTTGCACAAATGAAAAGACA+AGG | 0.695332 | 2_4:+4810401 | Msa0309980:CDS |
AAAATGATCAAACTACAACA+TGG | 0.718736 | 2_4:-4810709 | None:intergenic |
GTGCTAGTGTAGCTGCATGG+TGG | 0.751494 | 2_4:-4810103 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AACATGGATGTTGAAAAAAA+AGG | + | chr2_4:4810146-4810165 | Msa0309980:CDS | 25.0% |
!! | TGTCTTAACATCTTTTGTAA+CGG | - | chr2_4:4810288-4810307 | None:intergenic | 25.0% |
! | TTGTTAAAGACTATAAGATG+AGG | + | chr2_4:4810528-4810547 | Msa0309980:CDS | 25.0% |
! | TGAATCAAAAGTGTACAACA+TGG | + | chr2_4:4810130-4810149 | Msa0309980:CDS | 30.0% |
! | ATTATACTCAAAGAGCACAA+TGG | + | chr2_4:4810192-4810211 | Msa0309980:CDS | 30.0% |
GTTAAGACAATGATTCTAAC+AGG | + | chr2_4:4810299-4810318 | Msa0309980:CDS | 30.0% | |
TTTGCACAAATGAAAAGACA+AGG | + | chr2_4:4810401-4810420 | Msa0309980:CDS | 30.0% | |
TAAAGACTATAAGATGAGGT+TGG | + | chr2_4:4810532-4810551 | Msa0309980:CDS | 30.0% | |
AAAGACTATAAGATGAGGTT+GGG | + | chr2_4:4810533-4810552 | Msa0309980:CDS | 30.0% | |
TCAACAGCATCCTTAATGAT+GGG | + | chr2_4:4810254-4810273 | Msa0309980:CDS | 35.0% | |
ATGATTCTAACAGGAATTGC+TGG | + | chr2_4:4810308-4810327 | Msa0309980:CDS | 35.0% | |
AAGCAAAGGCAGCATAATAA+GGG | - | chr2_4:4810457-4810476 | None:intergenic | 35.0% | |
TTATTATGCTGCCTTTGCTT+CGG | + | chr2_4:4810457-4810476 | Msa0309980:CDS | 35.0% | |
ATCCAAAAGCAAACAAAGCA+AGG | - | chr2_4:4810580-4810599 | None:intergenic | 35.0% | |
TTTGGTGAAGTCTTCTTTGA+GGG | + | chr2_4:4810628-4810647 | Msa0309980:CDS | 35.0% | |
!! | TCTTCTTTGAGGGTTTTGAT+TGG | + | chr2_4:4810638-4810657 | Msa0309980:CDS | 35.0% |
!! | CTTGCTATGTCTCTTACTTT+TGG | + | chr2_4:4810668-4810687 | Msa0309980:CDS | 35.0% |
! | TCAAAGAGCACAATGGCTTA+GGG | + | chr2_4:4810199-4810218 | Msa0309980:CDS | 40.0% |
!! | GCTGTTTTAGGTGCTAATGA+TGG | + | chr2_4:4810224-4810243 | Msa0309980:CDS | 40.0% |
CTCAACAGCATCCTTAATGA+TGG | + | chr2_4:4810253-4810272 | Msa0309980:CDS | 40.0% | |
AAGGCAGCATAATAAGGGTT+AGG | - | chr2_4:4810452-4810471 | None:intergenic | 40.0% | |
GAAGCAAAGGCAGCATAATA+AGG | - | chr2_4:4810458-4810477 | None:intergenic | 40.0% | |
!!! | AGCCTTGCTTTGTTTGCTTT+TGG | + | chr2_4:4810575-4810594 | Msa0309980:CDS | 40.0% |
! | GATTGTTGAGTGCTGTTCTT+GGG | + | chr2_4:4810597-4810616 | Msa0309980:CDS | 40.0% |
CTCAAAGAAGACTTCACCAA+AGG | - | chr2_4:4810629-4810648 | None:intergenic | 40.0% | |
CTTTGGTGAAGTCTTCTTTG+AGG | + | chr2_4:4810627-4810646 | Msa0309980:CDS | 40.0% | |
!!! | TCTTTGAGGGTTTTGATTGG+TGG | + | chr2_4:4810641-4810660 | Msa0309980:CDS | 40.0% |
! | CTCAAAGAGCACAATGGCTT+AGG | + | chr2_4:4810198-4810217 | Msa0309980:CDS | 45.0% |
!! | GCATCCTTAATGATGGGTGT+TGG | + | chr2_4:4810260-4810279 | Msa0309980:CDS | 45.0% |
TAAGATGAGGTTGGGAGTTG+TGG | + | chr2_4:4810541-4810560 | Msa0309980:CDS | 45.0% | |
! | GGATTGTTGAGTGCTGTTCT+TGG | + | chr2_4:4810596-4810615 | Msa0309980:CDS | 45.0% |
TGTTCTTGGGAAAGCTCCTT+TGG | + | chr2_4:4810610-4810629 | Msa0309980:CDS | 45.0% | |
!!! | TGAGGGTTTTGATTGGTGGA+TGG | + | chr2_4:4810645-4810664 | Msa0309980:CDS | 45.0% |
TACGTGCTAGTGTAGCTGCA+TGG | - | chr2_4:4810109-4810128 | None:intergenic | 50.0% | |
!! | TGGCTTAGGGCAGCTGTTTT+AGG | + | chr2_4:4810212-4810231 | Msa0309980:CDS | 50.0% |
GGCTCCAACACCCATCATTA+AGG | - | chr2_4:4810267-4810286 | None:intergenic | 50.0% | |
!! | GGAATTGCTGGTCTTGTAGC+TGG | + | chr2_4:4810320-4810339 | Msa0309980:CDS | 50.0% |
TGTAGCTGGTGCATGTAGCA+TGG | + | chr2_4:4810334-4810353 | Msa0309980:CDS | 50.0% | |
GGTGCATGTAGCATGGCAAT+TGG | + | chr2_4:4810341-4810360 | Msa0309980:CDS | 50.0% | |
AAAAGCGATGGCCGAAGCAA+AGG | - | chr2_4:4810471-4810490 | None:intergenic | 50.0% | |
ATGAGGTTGGGAGTTGTGGT+TGG | + | chr2_4:4810545-4810564 | Msa0309980:CDS | 50.0% | |
GTGCTAGTGTAGCTGCATGG+TGG | - | chr2_4:4810106-4810125 | None:intergenic | 55.0% | |
!! | TGCTTCGGCCATCGCTTTTG+CGG | + | chr2_4:4810472-4810491 | Msa0309980:CDS | 55.0% |
!! | TCGGCCATCGCTTTTGCGGT+CGG | + | chr2_4:4810476-4810495 | Msa0309980:CDS | 60.0% |
! | GGCGCCTTTGTGCCGCTACT+CGG | + | chr2_4:4810497-4810516 | Msa0309980:CDS | 65.0% |
! | CTTTGTGCCGCTACTCGGCG+CGG | + | chr2_4:4810502-4810521 | Msa0309980:CDS | 65.0% |
ACAAACGCCGCGCCGAGTAG+CGG | - | chr2_4:4810512-4810531 | None:intergenic | 65.0% | |
!! | GGCGCCGACCGCAAAAGCGA+TGG | - | chr2_4:4810483-4810502 | None:intergenic | 70.0% |
CGCGCCGAGTAGCGGCACAA+AGG | - | chr2_4:4810504-4810523 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 4810086 | 4810724 | 4810086 | ID=Msa0309980;Name=Msa0309980 |
chr2_4 | mRNA | 4810086 | 4810724 | 4810086 | ID=Msa0309980-mRNA-1;Parent=Msa0309980;Name=Msa0309980-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|-1|0|1|-1|1|1|0|212 |
chr2_4 | exon | 4810086 | 4810724 | 4810086 | ID=Msa0309980-mRNA-1:exon:1637;Parent=Msa0309980-mRNA-1 |
chr2_4 | CDS | 4810086 | 4810724 | 4810086 | ID=Msa0309980-mRNA-1:cds;Parent=Msa0309980-mRNA-1 |
Gene Sequence |
Protein sequence |