Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333190 | XP_003627147.3 | 99.406 | 673 | 4 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1380 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333190 | sp|Q9C6I8|NOG1_ARATH | 77.139 | 678 | 143 | 5 | 1 | 673 | 1 | 671 | 0.0 | 1070 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032810 | Msa0333190 | 0.807289 | 5.435363e-50 | -8.615850e-47 |
| Msa0045730 | Msa0333190 | 0.810151 | 1.329442e-50 | -8.615850e-47 |
| Msa0097600 | Msa0333190 | 0.805016 | 1.636156e-49 | -8.615850e-47 |
| Msa0116130 | Msa0333190 | 0.844482 | 7.355594e-59 | -8.615850e-47 |
| Msa0118710 | Msa0333190 | 0.824705 | 6.983703e-54 | -8.615850e-47 |
| Msa0142110 | Msa0333190 | 0.806827 | 6.808530e-50 | -8.615850e-47 |
| Msa0163760 | Msa0333190 | 0.821037 | 4.994258e-53 | -8.615850e-47 |
| Msa0167480 | Msa0333190 | 0.850877 | 1.278305e-60 | -8.615850e-47 |
| Msa0188690 | Msa0333190 | 0.843728 | 1.172250e-58 | -8.615850e-47 |
| Msa0219120 | Msa0333190 | 0.803672 | 3.117332e-49 | -8.615850e-47 |
| Msa0221030 | Msa0333190 | 0.841933 | 3.517606e-58 | -8.615850e-47 |
| Msa0231100 | Msa0333190 | 0.800807 | 1.212039e-48 | -8.615850e-47 |
| Msa0262480 | Msa0333190 | 0.829185 | 5.929853e-55 | -8.615850e-47 |
| Msa0270210 | Msa0333190 | 0.857326 | 1.761310e-62 | -8.615850e-47 |
| Msa0296250 | Msa0333190 | 0.832559 | 8.822226e-56 | -8.615850e-47 |
| Msa0300350 | Msa0333190 | 0.830307 | 3.161303e-55 | -8.615850e-47 |
| Msa0307850 | Msa0333190 | 0.826983 | 2.010173e-54 | -8.615850e-47 |
| Msa0327300 | Msa0333190 | 0.814825 | 1.265060e-51 | -8.615850e-47 |
| Msa0332640 | Msa0333190 | 0.837647 | 4.594004e-57 | -8.615850e-47 |
| Msa0333190 | Msa0348830 | 0.806989 | 6.290689e-50 | -8.615850e-47 |
| Msa0333190 | Msa0435370 | 0.801139 | 1.036517e-48 | -8.615850e-47 |
| Msa0333190 | Msa0443390 | 0.838952 | 2.117996e-57 | -8.615850e-47 |
| Msa0333190 | Msa0490820 | 0.820861 | 5.485307e-53 | -8.615850e-47 |
| Msa0333190 | Msa0526540 | 0.803977 | 2.694498e-49 | -8.615850e-47 |
| Msa0333190 | Msa0534750 | 0.875374 | 3.240116e-68 | -8.615850e-47 |
| Msa0333190 | Msa0561430 | 0.807596 | 4.679371e-50 | -8.615850e-47 |
| Msa0333190 | Msa0576940 | 0.811517 | 6.728883e-51 | -8.615850e-47 |
| Msa0333190 | Msa0590940 | 0.835562 | 1.561546e-56 | -8.615850e-47 |
| Msa0333190 | Msa0615580 | 0.801634 | 8.207279e-49 | -8.615850e-47 |
| Msa0333190 | Msa0623200 | 0.804740 | 1.868372e-49 | -8.615850e-47 |
| Msa0333190 | Msa0654870 | 0.806238 | 9.065862e-50 | -8.615850e-47 |
| Msa0333190 | Msa0656810 | 0.820990 | 5.122603e-53 | -8.615850e-47 |
| Msa0333190 | Msa0738100 | 0.806332 | 8.659962e-50 | -8.615850e-47 |
| Msa0333190 | Msa0739080 | 0.818317 | 2.087791e-52 | -8.615850e-47 |
| Msa0333190 | Msa0769590 | 0.800440 | 1.439648e-48 | -8.615850e-47 |
| Msa0333190 | Msa0785130 | 0.841824 | 3.760018e-58 | -8.615850e-47 |
| Msa0333190 | Msa0790400 | 0.831966 | 1.237052e-55 | -8.615850e-47 |
| Msa0333190 | Msa0806880 | 0.800382 | 1.479302e-48 | -8.615850e-47 |
| Msa0333190 | Msa0817540 | 0.843002 | 1.830804e-58 | -8.615850e-47 |
| Msa0333190 | Msa0819540 | 0.813423 | 2.579353e-51 | -8.615850e-47 |
| Msa0333190 | Msa0859710 | 0.802294 | 6.005960e-49 | -8.615850e-47 |
| Msa0333190 | Msa0867060 | 0.808964 | 2.390464e-50 | -8.615850e-47 |
| Msa0333190 | Msa0963020 | 0.828140 | 1.060520e-54 | -8.615850e-47 |
| Msa0333190 | Msa1019240 | 0.841107 | 5.806852e-58 | -8.615850e-47 |
| Msa0333190 | Msa1019260 | 0.831407 | 1.699249e-55 | -8.615850e-47 |
| Msa0333190 | Msa1104210 | 0.825347 | 4.924952e-54 | -8.615850e-47 |
| Msa0333190 | Msa1166870 | 0.828243 | 1.002068e-54 | -8.615850e-47 |
| Msa0333190 | Msa1179980 | 0.807309 | 5.383160e-50 | -8.615850e-47 |
| Msa0333190 | Msa1195300 | 0.873668 | 1.230502e-67 | -8.615850e-47 |
| Msa0333190 | Msa1208020 | 0.814456 | 1.526229e-51 | -8.615850e-47 |
| Msa0333190 | Msa1241190 | 0.818218 | 2.198922e-52 | -8.615850e-47 |
| Msa0333190 | Msa1266060 | 0.807686 | 4.477679e-50 | -8.615850e-47 |
| Msa0333190 | Msa1270620 | 0.806628 | 7.500451e-50 | -8.615850e-47 |
| Msa0333190 | Msa1270690 | 0.804632 | 1.968215e-49 | -8.615850e-47 |
| Msa0333190 | Msa1306990 | 0.806240 | 9.054965e-50 | -8.615850e-47 |
| Msa0333190 | Msa1349570 | 0.816371 | 5.723727e-52 | -8.615850e-47 |
| Msa0333190 | Msa1369190 | 0.804958 | 1.682438e-49 | -8.615850e-47 |
| Msa0333190 | Msa1401390 | 0.813356 | 2.667844e-51 | -8.615850e-47 |
| Msa0333190 | Msa1403570 | 0.869666 | 2.608982e-66 | -8.615850e-47 |
| Msa0333190 | Msa1410440 | 0.809988 | 1.441020e-50 | -8.615850e-47 |
| Msa0333190 | Msa1413500 | 0.800444 | 1.437099e-48 | -8.615850e-47 |
| Msa0333190 | Msa1427560 | 0.803535 | 3.328589e-49 | -8.615850e-47 |
| Msa0333190 | Msa1443300 | 0.828219 | 1.015344e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333190 | MtrunA17_Chr8g0342681 | 99.406 | 673 | 4 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1380 |
| Msa0333190 | MtrunA17_Chr2g0316271 | 99.406 | 673 | 4 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1378 |
| Msa0333190 | MtrunA17_Chr7g0233051 | 28.065 | 310 | 196 | 5 | 62 | 361 | 136 | 428 | 2.32e-30 | 124 |
| Msa0333190 | MtrunA17_Chr2g0319171 | 66.071 | 112 | 32 | 4 | 566 | 673 | 39 | 148 | 4.13e-28 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333190 | AT1G50920.1 | 77.139 | 678 | 143 | 5 | 1 | 673 | 1 | 671 | 0.0 | 1070 |
| Msa0333190 | AT1G10300.3 | 70.441 | 680 | 172 | 6 | 1 | 673 | 30 | 687 | 0.0 | 932 |
| Msa0333190 | AT1G10300.1 | 70.441 | 680 | 172 | 6 | 1 | 673 | 30 | 687 | 0.0 | 932 |
| Msa0333190 | AT1G10300.2 | 70.441 | 680 | 172 | 6 | 1 | 673 | 1 | 658 | 0.0 | 931 |
| Msa0333190 | AT1G80770.4 | 25.967 | 362 | 256 | 4 | 6 | 365 | 76 | 427 | 1.59e-30 | 125 |
| Msa0333190 | AT1G80770.3 | 27.241 | 290 | 206 | 2 | 6 | 293 | 69 | 355 | 3.11e-30 | 124 |
| Msa0333190 | AT1G80770.2 | 28.448 | 232 | 166 | 0 | 62 | 293 | 51 | 282 | 3.84e-30 | 122 |
| Msa0333190 | AT1G80770.1 | 27.241 | 290 | 206 | 2 | 6 | 293 | 92 | 378 | 4.50e-30 | 124 |
| Msa0333190 | AT1G80770.5 | 25.967 | 362 | 256 | 4 | 6 | 365 | 107 | 458 | 6.49e-30 | 124 |
| Msa0333190 | AT1G80770.6 | 25.967 | 362 | 256 | 4 | 6 | 365 | 123 | 474 | 1.39e-29 | 123 |
| Msa0333190 | AT3G23860.1 | 36.757 | 185 | 100 | 6 | 6 | 179 | 6 | 184 | 5.52e-20 | 90.1 |
| Msa0333190 | AT3G23860.3 | 36.757 | 185 | 100 | 6 | 6 | 179 | 19 | 197 | 7.22e-20 | 90.1 |
| Msa0333190 | AT3G23860.2 | 36.757 | 185 | 100 | 6 | 6 | 179 | 19 | 197 | 7.22e-20 | 90.1 |
Find 167 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATACAAGTGCTTCGGTTTA+AGG | 0.111950 | 2_4:-50822410 | None:intergenic |
| GGCATTCTTGTTTCTCTTCT+TGG | 0.113775 | 2_4:-50822355 | None:intergenic |
| CATTGATACACCTGGGATTT+TGG | 0.122171 | 2_4:+50821105 | Msa0333190:CDS |
| AGATAATCTGCCAGAAATTT+TGG | 0.147637 | 2_4:+50821774 | Msa0333190:CDS |
| ATCAAAATAGTCCTGGTATT+TGG | 0.197584 | 2_4:-50820944 | None:intergenic |
| TTGTTCTTCTTGGATATATC+AGG | 0.214420 | 2_4:+50821202 | Msa0333190:CDS |
| TGGGCCGAGTTTGGCGTATT+TGG | 0.227689 | 2_4:+50820880 | Msa0333190:CDS |
| AATACTGCTAGGAATCTTAT+TGG | 0.238602 | 2_4:+50820746 | Msa0333190:CDS |
| TTGTGACCATCCAAAATTTC+TGG | 0.250913 | 2_4:-50821784 | None:intergenic |
| TCCTTCTGGTCACGTGGTTT+CGG | 0.274078 | 2_4:-50821583 | None:intergenic |
| CCTTTATCAACAAGATTACT+AGG | 0.281811 | 2_4:+50820996 | Msa0333190:CDS |
| AGCGGCAATATTGTTCTTCT+TGG | 0.291223 | 2_4:+50821192 | Msa0333190:CDS |
| ATAATGCTTTCTCAAATTCA+TGG | 0.310089 | 2_4:-50821725 | None:intergenic |
| GAGCAACTTAACATAATCTT+TGG | 0.314328 | 2_4:-50820777 | None:intergenic |
| TCTTGGGCTTGATCCTTCTA+TGG | 0.315254 | 2_4:+50822092 | Msa0333190:CDS |
| ATCCCATCGTTTCTTCCTTC+TGG | 0.317491 | 2_4:-50822174 | None:intergenic |
| TGCTTGAAGGTTGCTGCTCT+TGG | 0.323045 | 2_4:+50820830 | Msa0333190:CDS |
| TTTGAGAAAGCATTATATTC+TGG | 0.326466 | 2_4:+50821732 | Msa0333190:CDS |
| GTGTATTCCCCTGGCAGTTT+TGG | 0.334679 | 2_4:+50821615 | Msa0333190:CDS |
| GCTAAAGCCTCTTGCTGTTC+CGG | 0.334792 | 2_4:-50821928 | None:intergenic |
| GTAGATCACTGTCTCGTTCC+AGG | 0.336726 | 2_4:+50822238 | Msa0333190:CDS |
| AAGGATCTGGAGGAAGAAAA+TGG | 0.337588 | 2_4:+50821685 | Msa0333190:CDS |
| TACACGGAGGTCTTTCCTTC+TGG | 0.338390 | 2_4:-50821597 | None:intergenic |
| TGAAGCAGATCACCATAAAA+AGG | 0.341915 | 2_4:-50820677 | None:intergenic |
| TTGTTCCTGGAGAGGGCCTT+AGG | 0.343024 | 2_4:+50822286 | Msa0333190:CDS |
| CCTAGTAATCTTGTTGATAA+AGG | 0.346637 | 2_4:-50820996 | None:intergenic |
| TCGATGAGTTTCCTCGTCTT+GGG | 0.355491 | 2_4:+50820645 | Msa0333190:CDS |
| GGAAGGCAGCTGTCGTCTCT+TGG | 0.361895 | 2_4:+50822075 | Msa0333190:CDS |
| TAAGAGGATTGGGCCGAGTT+TGG | 0.363769 | 2_4:+50820871 | Msa0333190:CDS |
| ACGAGGAAACTCATCGATTA+TGG | 0.370750 | 2_4:-50820639 | None:intergenic |
| AAACCGAAGCACTTGTATAC+TGG | 0.371562 | 2_4:+50822414 | Msa0333190:CDS |
| GTGAAATTGCATAGCCTTTG+TGG | 0.373188 | 2_4:-50820550 | None:intergenic |
| TGGATATATCAGGGTCTTGT+GGG | 0.379230 | 2_4:+50821212 | Msa0333190:CDS |
| TCCACCCTATGTAGAATGTC+AGG | 0.383879 | 2_4:-50821826 | None:intergenic |
| TGGAAAGAGAGGAAGGGTTA+AGG | 0.386417 | 2_4:+50821854 | Msa0333190:CDS |
| TATGTTAAGTTGCTCAAGTA+TGG | 0.397060 | 2_4:+50820785 | Msa0333190:CDS |
| TACCACTAAGTCGCTGTTTG+TGG | 0.397916 | 2_4:+50821048 | Msa0333190:CDS |
| CCACCACATGAAGTTGTTCC+TGG | 0.400337 | 2_4:+50822273 | Msa0333190:CDS |
| ATCGATGAGTTTCCTCGTCT+TGG | 0.401400 | 2_4:+50820644 | Msa0333190:CDS |
| GCTTGAAGGTTGCTGCTCTT+GGG | 0.424098 | 2_4:+50820831 | Msa0333190:CDS |
| TTGGATATATCAGGGTCTTG+TGG | 0.430521 | 2_4:+50821211 | Msa0333190:CDS |
| AAGGAACTCTTTCCCACATT+CGG | 0.430708 | 2_4:-50820977 | None:intergenic |
| ACCCACAAACAGCGACTTAG+TGG | 0.433204 | 2_4:-50821050 | None:intergenic |
| AAGAGGCTTTAGCTGAGATT+AGG | 0.440739 | 2_4:+50821938 | Msa0333190:CDS |
| ACCACTAAGTCGCTGTTTGT+GGG | 0.442566 | 2_4:+50821049 | Msa0333190:CDS |
| GAAGAGTTGGAAAGAGAGGA+AGG | 0.448886 | 2_4:+50821847 | Msa0333190:CDS |
| GAAGGCAGCTGTCGTCTCTT+GGG | 0.448895 | 2_4:+50822076 | Msa0333190:CDS |
| GAGTTTGGCGTATTTGGAAC+AGG | 0.449120 | 2_4:+50820886 | Msa0333190:CDS |
| GGAACAGGTTAGGCAGCATA+TGG | 0.451534 | 2_4:+50820901 | Msa0333190:CDS |
| GCAGTTCACAACAGAAAGAA+TGG | 0.457219 | 2_4:+50822053 | Msa0333190:CDS |
| GTCGCTGTTTGTGGGTCATA+CGG | 0.461201 | 2_4:+50821057 | Msa0333190:CDS |
| CTTTAGCTTCCAAAACTGCC+AGG | 0.461472 | 2_4:-50821624 | None:intergenic |
| GCGCCTGTCTGTCTTTCCGT+TGG | 0.461936 | 2_4:-50822445 | None:intergenic |
| AAATCAACGACTGTCTGAAC+AGG | 0.462069 | 2_4:+50821545 | Msa0333190:CDS |
| GGTGGAAGAGTTGGAAAGAG+AGG | 0.462216 | 2_4:+50821843 | Msa0333190:CDS |
| CTGAGACGCTGTTTCTTGCT+AGG | 0.462261 | 2_4:-50822216 | None:intergenic |
| GGATGTGTACTGTGCTTAAG+AGG | 0.463986 | 2_4:+50820855 | Msa0333190:CDS |
| TGGCGTATTTGGAACAGGTT+AGG | 0.466876 | 2_4:+50820891 | Msa0333190:CDS |
| TCGAATTTCCTTGAAACGGT+TGG | 0.471228 | 2_4:-50822021 | None:intergenic |
| AGAGCCGACCAACCGTTTCA+AGG | 0.471571 | 2_4:+50822013 | Msa0333190:CDS |
| ATTCTGTTAATAGCCATAGA+AGG | 0.473599 | 2_4:-50822105 | None:intergenic |
| CAAGGAAATTCGACAAGGAC+AGG | 0.474490 | 2_4:+50822031 | Msa0333190:CDS |
| CTTGTCGAATTTCCTTGAAA+CGG | 0.475481 | 2_4:-50822025 | None:intergenic |
| CTGGTATTTGGATCAATTGA+AGG | 0.475786 | 2_4:-50820932 | None:intergenic |
| AAGATCACTGTGGTACCAAA+TGG | 0.476500 | 2_4:+50820470 | Msa0333190:CDS |
| TTTCCAGTATACAAGTGCTT+CGG | 0.477671 | 2_4:-50822417 | None:intergenic |
| ATCTGAGGAGGATATGAAGT+TGG | 0.486204 | 2_4:+50821345 | Msa0333190:CDS |
| TGTACTGTGCTTAAGAGGAT+TGG | 0.487043 | 2_4:+50820860 | Msa0333190:CDS |
| CAAGACTGATTTGCAGCCGT+TGG | 0.487122 | 2_4:+50821315 | Msa0333190:CDS |
| TGTTCCTGGAGAGGGCCTTA+GGG | 0.495561 | 2_4:+50822287 | Msa0333190:CDS |
| AACAACTTCATGTGGTGGGC+GGG | 0.497263 | 2_4:-50822268 | None:intergenic |
| GTATCGTTGTAAGTGCTTGA+AGG | 0.497682 | 2_4:+50820817 | Msa0333190:CDS |
| TGGGTATACTATTGCTCAGC+AGG | 0.498609 | 2_4:+50821231 | Msa0333190:CDS |
| ATAATATTCCGATCCTCAAA+CGG | 0.499586 | 2_4:-50821133 | None:intergenic |
| TCTACATAGGGTGGAAGAGT+TGG | 0.506957 | 2_4:+50821834 | Msa0333190:CDS |
| ACTGATTTGCAGCCGTTGGA+TGG | 0.507314 | 2_4:+50821319 | Msa0333190:CDS |
| TCATCTTAATCTCAACCCTC+TGG | 0.510875 | 2_4:-50821513 | None:intergenic |
| TCTATCAGCTTCTCCACGCT+TGG | 0.514227 | 2_4:-50822376 | None:intergenic |
| TGGATAGGCCGTTTGAGGAT+CGG | 0.514877 | 2_4:+50821125 | Msa0333190:CDS |
| TTGAAGACTTCGATTGGTCA+TGG | 0.522130 | 2_4:+50821391 | Msa0333190:CDS |
| ATACGGATTACAAGTATTTG+AGG | 0.523494 | 2_4:+50821074 | Msa0333190:CDS |
| AGGCTTTAGCTGAGATTAGG+AGG | 0.525671 | 2_4:+50821941 | Msa0333190:CDS |
| GTACTGTGCTTAAGAGGATT+GGG | 0.532555 | 2_4:+50820861 | Msa0333190:CDS |
| GATCATTACAAGCTTGCACT+TGG | 0.534683 | 2_4:+50820716 | Msa0333190:CDS |
| ATATTCTGGCTGATGATGAA+TGG | 0.535908 | 2_4:+50821746 | Msa0333190:CDS |
| TTTAGCTTCCAAAACTGCCA+GGG | 0.537161 | 2_4:-50821623 | None:intergenic |
| CATCTAGGAAAGGTCGGAAG+AGG | 0.537520 | 2_4:+50822142 | Msa0333190:CDS |
| AGCTAAGCAAGCAGCTGCTG+AGG | 0.538394 | 2_4:+50821645 | Msa0333190:CDS |
| CAGTTCACAACAGAAAGAAT+GGG | 0.538822 | 2_4:+50822054 | Msa0333190:CDS |
| TGTTCTTCTTGGATATATCA+GGG | 0.539338 | 2_4:+50821203 | Msa0333190:CDS |
| CTGGTTCAGCAATCTCTCAC+AGG | 0.539812 | 2_4:-50821494 | None:intergenic |
| GAAGCGTTGAAGACTTCGAT+TGG | 0.542280 | 2_4:+50821385 | Msa0333190:CDS |
| GAATCCCTAAGGCCCTCTCC+AGG | 0.542638 | 2_4:-50822291 | None:intergenic |
| GAGGAAGAAAATGGAGGTGC+TGG | 0.545405 | 2_4:+50821694 | Msa0333190:CDS |
| TTGACCCTGACATTCTACAT+AGG | 0.545444 | 2_4:+50821821 | Msa0333190:CDS |
| TGAAGGTTGCTGCTCTTGGG+AGG | 0.546694 | 2_4:+50820834 | Msa0333190:CDS |
| GCTCCAACGGAAAGACAGAC+AGG | 0.546765 | 2_4:+50822442 | Msa0333190:CDS |
| ATTTCCTTGAAACGGTTGGT+CGG | 0.548211 | 2_4:-50822017 | None:intergenic |
| GACTTAGTGGTAAACGCATA+CGG | 0.548539 | 2_4:-50821037 | None:intergenic |
| CCCACAAATCAAAATAGTCC+TGG | 0.549797 | 2_4:-50820951 | None:intergenic |
| CATGAAGTTGTTCCTGGAGA+GGG | 0.550937 | 2_4:+50822279 | Msa0333190:CDS |
| CTTTATCAACAAGATTACTA+GGG | 0.552134 | 2_4:+50820997 | Msa0333190:CDS |
| TATCAAGTCATTGATACACC+TGG | 0.555673 | 2_4:+50821097 | Msa0333190:CDS |
| CCAGGAACAACTTCATGTGG+TGG | 0.557113 | 2_4:-50822273 | None:intergenic |
| CAAAGCAATTAAACTTGCGA+AGG | 0.557324 | 2_4:+50822326 | Msa0333190:CDS |
| TGGTGGGCGGGAGACCGACC+TGG | 0.559000 | 2_4:-50822256 | None:intergenic |
| AAGAGAGGAAGGGTTAAGGC+AGG | 0.562461 | 2_4:+50821858 | Msa0333190:CDS |
| TTCGATTGGTCATGGAGGCG+AGG | 0.565252 | 2_4:+50821399 | Msa0333190:CDS |
| TCGATTGGTCATGGAGGCGA+GGG | 0.566051 | 2_4:+50821400 | Msa0333190:CDS |
| ATGAGTGCGTTGACTGAAGA+AGG | 0.569510 | 2_4:+50821448 | Msa0333190:CDS |
| TTCTTCAGTCAACGCACTCA+TGG | 0.570366 | 2_4:-50821446 | None:intergenic |
| GGTCTTTCCTTCTGGTCACG+TGG | 0.574635 | 2_4:-50821589 | None:intergenic |
| AAGACCTCCGTGTATTCCCC+TGG | 0.575711 | 2_4:+50821606 | Msa0333190:CDS |
| TTGTTGCACACAACAATCAA+AGG | 0.575746 | 2_4:-50821295 | None:intergenic |
| TGACCCTGACATTCTACATA+GGG | 0.576210 | 2_4:+50821822 | Msa0333190:CDS |
| CGATGAGTTTCCTCGTCTTG+GGG | 0.576928 | 2_4:+50820646 | Msa0333190:CDS |
| CTTCAATTGATCCAAATACC+AGG | 0.577769 | 2_4:+50820933 | Msa0333190:CDS |
| GATTTGTGGGTATCCGAATG+TGG | 0.583677 | 2_4:+50820964 | Msa0333190:CDS |
| TCCGAAACCACGTGACCAGA+AGG | 0.588470 | 2_4:+50821582 | Msa0333190:CDS |
| TGTTCCAAATACGCCAAACT+CGG | 0.588633 | 2_4:-50820884 | None:intergenic |
| AACGGCCTATCCAAAATCCC+AGG | 0.591191 | 2_4:-50821115 | None:intergenic |
| TCCTCAGATAATCCATCCAA+CGG | 0.593838 | 2_4:-50821331 | None:intergenic |
| TATACTGGAAAGCGCTCCAA+CGG | 0.594583 | 2_4:+50822429 | Msa0333190:CDS |
| CAGGAACAACTTCATGTGGT+GGG | 0.604752 | 2_4:-50822272 | None:intergenic |
| TGCTCTTGCGCATTTGAGAG+CGG | 0.605421 | 2_4:+50821174 | Msa0333190:CDS |
| AAGAGTTGGAAAGAGAGGAA+GGG | 0.605706 | 2_4:+50821848 | Msa0333190:CDS |
| CCCTGACATTCTACATAGGG+TGG | 0.608061 | 2_4:+50821825 | Msa0333190:CDS |
| TCACCAGAAGGAAGAAACGA+TGG | 0.608184 | 2_4:+50822171 | Msa0333190:CDS |
| ATCACTGTCTCGTTCCAGGT+CGG | 0.608845 | 2_4:+50822242 | Msa0333190:CDS |
| TTGGTCAGATTAATACTGCT+AGG | 0.610371 | 2_4:+50820735 | Msa0333190:CDS |
| AGAAGGAAGAAACGATGGGA+TGG | 0.612953 | 2_4:+50822176 | Msa0333190:CDS |
| GAACAACTTCATGTGGTGGG+CGG | 0.613605 | 2_4:-50822269 | None:intergenic |
| CACCAGAAGGAAGAAACGAT+GGG | 0.615415 | 2_4:+50822172 | Msa0333190:CDS |
| TGCGTAGCAGATCTGCATCT+AGG | 0.616314 | 2_4:+50822127 | Msa0333190:CDS |
| AGGTTAGGCAGCATATGGCT+AGG | 0.618497 | 2_4:+50820906 | Msa0333190:CDS |
| ATTGACACCGGAACAGCAAG+AGG | 0.621917 | 2_4:+50821921 | Msa0333190:CDS |
| GCCGTTGGATGGATTATCTG+AGG | 0.624201 | 2_4:+50821330 | Msa0333190:CDS |
| GTGAGAGATTGCTGAACCAG+AGG | 0.624481 | 2_4:+50821497 | Msa0333190:CDS |
| ATCAAGTCATTGATACACCT+GGG | 0.625389 | 2_4:+50821098 | Msa0333190:CDS |
| AGCAGATCTGCATCTAGGAA+AGG | 0.625927 | 2_4:+50822132 | Msa0333190:CDS |
| TCTCCAGGAACAACTTCATG+TGG | 0.626458 | 2_4:-50822276 | None:intergenic |
| AAAACTGCCAGGGGAATACA+CGG | 0.628718 | 2_4:-50821613 | None:intergenic |
| AAAGCAATTAAACTTGCGAA+GGG | 0.631135 | 2_4:+50822327 | Msa0333190:CDS |
| CCACCCTATGTAGAATGTCA+GGG | 0.631460 | 2_4:-50821825 | None:intergenic |
| ATTTGTGGGTATCCGAATGT+GGG | 0.631555 | 2_4:+50820965 | Msa0333190:CDS |
| ATCTAGGAAAGGTCGGAAGA+GGG | 0.633227 | 2_4:+50822143 | Msa0333190:CDS |
| AGAAACAAGAATGCCAAGCG+TGG | 0.633691 | 2_4:+50822363 | Msa0333190:CDS |
| ACATGAAGTTGTTCCTGGAG+AGG | 0.634847 | 2_4:+50822278 | Msa0333190:CDS |
| TTAGCTTCCAAAACTGCCAG+GGG | 0.635541 | 2_4:-50821622 | None:intergenic |
| TAGCCTTTGTGGACAACAGT+TGG | 0.638716 | 2_4:-50820539 | None:intergenic |
| GATCTGCATCTAGGAAAGGT+CGG | 0.639204 | 2_4:+50822136 | Msa0333190:CDS |
| GGATGAATGTCCCCAAGACG+AGG | 0.644458 | 2_4:-50820656 | None:intergenic |
| ACACCAACTGTTGTCCACAA+AGG | 0.647881 | 2_4:+50820536 | Msa0333190:CDS |
| GTATTCTAATCCAACAACAT+CGG | 0.653178 | 2_4:+50821971 | Msa0333190:CDS |
| GTATACTATTGCTCAGCAGG+CGG | 0.653456 | 2_4:+50821234 | Msa0333190:CDS |
| AAGAGGGAGAGATCACCAGA+AGG | 0.653816 | 2_4:+50822159 | Msa0333190:CDS |
| CGTTTCAAGGAAATTCGACA+AGG | 0.654192 | 2_4:+50822026 | Msa0333190:CDS |
| TCACAACAGAAAGAATGGGA+AGG | 0.666061 | 2_4:+50822058 | Msa0333190:CDS |
| AGATGGAACTGAATTGACAC+CGG | 0.673997 | 2_4:+50821909 | Msa0333190:CDS |
| CGATTGGTCATGGAGGCGAG+GGG | 0.686897 | 2_4:+50821401 | Msa0333190:CDS |
| TGAGAGATTGCTGAACCAGA+GGG | 0.687755 | 2_4:+50821498 | Msa0333190:CDS |
| GTTGGATGGATTATCTGAGG+AGG | 0.697358 | 2_4:+50821333 | Msa0333190:CDS |
| AAGACTTCGATTGGTCATGG+AGG | 0.712504 | 2_4:+50821394 | Msa0333190:CDS |
| GACTGAAGAAGGTGTGATTG+CGG | 0.713697 | 2_4:+50821459 | Msa0333190:CDS |
| GATCTGGAGGAAGAAAATGG+AGG | 0.764738 | 2_4:+50821688 | Msa0333190:CDS |
| ACTGCCAGGGGAATACACGG+AGG | 0.805974 | 2_4:-50821610 | None:intergenic |
| CAATTTCAAGAAGATCACTG+TGG | 0.830107 | 2_4:+50820460 | Msa0333190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | CTTTATCAACAAGATTACTA+GGG | + | chr2_4:50820997-50821016 | Msa0333190:CDS | 25.0% |
| ! | ATAATGCTTTCTCAAATTCA+TGG | - | chr2_4:50821728-50821747 | None:intergenic | 25.0% |
| !!! | TTTGAGAAAGCATTATATTC+TGG | + | chr2_4:50821732-50821751 | Msa0333190:CDS | 25.0% |
| ! | CTTTATCAACAAGATTACTA+GGG | + | chr2_4:50820997-50821016 | Msa0333190:CDS | 25.0% |
| ! | ATAATGCTTTCTCAAATTCA+TGG | - | chr2_4:50821728-50821747 | None:intergenic | 25.0% |
| !!! | TTTGAGAAAGCATTATATTC+TGG | + | chr2_4:50821732-50821751 | Msa0333190:CDS | 25.0% |
| ! | TCAACGAAATCTTTTCCATT+TGG | - | chr2_4:50820488-50820507 | None:intergenic | 30.0% |
| !! | CTTTTCGTGAAAATTAGTCT+GGG | - | chr2_4:50820612-50820631 | None:intergenic | 30.0% |
| AATACTGCTAGGAATCTTAT+TGG | + | chr2_4:50820746-50820765 | Msa0333190:CDS | 30.0% | |
| GAGCAACTTAACATAATCTT+TGG | - | chr2_4:50820780-50820799 | None:intergenic | 30.0% | |
| ! | TATGTTAAGTTGCTCAAGTA+TGG | + | chr2_4:50820785-50820804 | Msa0333190:CDS | 30.0% |
| ATCAAAATAGTCCTGGTATT+TGG | - | chr2_4:50820947-50820966 | None:intergenic | 30.0% | |
| ! | CCTAGTAATCTTGTTGATAA+AGG | - | chr2_4:50820999-50821018 | None:intergenic | 30.0% |
| CCTTTATCAACAAGATTACT+AGG | + | chr2_4:50820996-50821015 | Msa0333190:CDS | 30.0% | |
| ! | ATACGGATTACAAGTATTTG+AGG | + | chr2_4:50821074-50821093 | Msa0333190:CDS | 30.0% |
| ATAATATTCCGATCCTCAAA+CGG | - | chr2_4:50821136-50821155 | None:intergenic | 30.0% | |
| TTGTTCTTCTTGGATATATC+AGG | + | chr2_4:50821202-50821221 | Msa0333190:CDS | 30.0% | |
| TGTTCTTCTTGGATATATCA+GGG | + | chr2_4:50821203-50821222 | Msa0333190:CDS | 30.0% | |
| ! | AGATAATCTGCCAGAAATTT+TGG | + | chr2_4:50821774-50821793 | Msa0333190:CDS | 30.0% |
| !!! | GATGATGATTTTGAGATAGA+TGG | + | chr2_4:50821892-50821911 | Msa0333190:CDS | 30.0% |
| GTATTCTAATCCAACAACAT+CGG | + | chr2_4:50821971-50821990 | Msa0333190:CDS | 30.0% | |
| ! | TCTTTTTAATCCGATGTTGT+TGG | - | chr2_4:50821984-50822003 | None:intergenic | 30.0% |
| ATTCTGTTAATAGCCATAGA+AGG | - | chr2_4:50822108-50822127 | None:intergenic | 30.0% | |
| AAAGCAATTAAACTTGCGAA+GGG | + | chr2_4:50822327-50822346 | Msa0333190:CDS | 30.0% | |
| ! | TCAACGAAATCTTTTCCATT+TGG | - | chr2_4:50820488-50820507 | None:intergenic | 30.0% |
| !! | CTTTTCGTGAAAATTAGTCT+GGG | - | chr2_4:50820612-50820631 | None:intergenic | 30.0% |
| AATACTGCTAGGAATCTTAT+TGG | + | chr2_4:50820746-50820765 | Msa0333190:CDS | 30.0% | |
| GAGCAACTTAACATAATCTT+TGG | - | chr2_4:50820780-50820799 | None:intergenic | 30.0% | |
| ! | TATGTTAAGTTGCTCAAGTA+TGG | + | chr2_4:50820785-50820804 | Msa0333190:CDS | 30.0% |
| ATCAAAATAGTCCTGGTATT+TGG | - | chr2_4:50820947-50820966 | None:intergenic | 30.0% | |
| ! | CCTAGTAATCTTGTTGATAA+AGG | - | chr2_4:50820999-50821018 | None:intergenic | 30.0% |
| CCTTTATCAACAAGATTACT+AGG | + | chr2_4:50820996-50821015 | Msa0333190:CDS | 30.0% | |
| ! | ATACGGATTACAAGTATTTG+AGG | + | chr2_4:50821074-50821093 | Msa0333190:CDS | 30.0% |
| ATAATATTCCGATCCTCAAA+CGG | - | chr2_4:50821136-50821155 | None:intergenic | 30.0% | |
| TTGTTCTTCTTGGATATATC+AGG | + | chr2_4:50821202-50821221 | Msa0333190:CDS | 30.0% | |
| TGTTCTTCTTGGATATATCA+GGG | + | chr2_4:50821203-50821222 | Msa0333190:CDS | 30.0% | |
| ! | AGATAATCTGCCAGAAATTT+TGG | + | chr2_4:50821774-50821793 | Msa0333190:CDS | 30.0% |
| !!! | GATGATGATTTTGAGATAGA+TGG | + | chr2_4:50821892-50821911 | Msa0333190:CDS | 30.0% |
| GTATTCTAATCCAACAACAT+CGG | + | chr2_4:50821971-50821990 | Msa0333190:CDS | 30.0% | |
| ! | TCTTTTTAATCCGATGTTGT+TGG | - | chr2_4:50821984-50822003 | None:intergenic | 30.0% |
| ATTCTGTTAATAGCCATAGA+AGG | - | chr2_4:50822108-50822127 | None:intergenic | 30.0% | |
| AAAGCAATTAAACTTGCGAA+GGG | + | chr2_4:50822327-50822346 | Msa0333190:CDS | 30.0% | |
| CAATTTCAAGAAGATCACTG+TGG | + | chr2_4:50820460-50820479 | Msa0333190:CDS | 35.0% | |
| ! | CTTTTCGCATGTAGAATTGT+CGG | - | chr2_4:50820580-50820599 | None:intergenic | 35.0% |
| ! | GCTTTTCGTGAAAATTAGTC+TGG | - | chr2_4:50820613-50820632 | None:intergenic | 35.0% |
| TGAAGCAGATCACCATAAAA+AGG | - | chr2_4:50820680-50820699 | None:intergenic | 35.0% | |
| TTGGTCAGATTAATACTGCT+AGG | + | chr2_4:50820735-50820754 | Msa0333190:CDS | 35.0% | |
| CTGGTATTTGGATCAATTGA+AGG | - | chr2_4:50820935-50820954 | None:intergenic | 35.0% | |
| CTTCAATTGATCCAAATACC+AGG | + | chr2_4:50820933-50820952 | Msa0333190:CDS | 35.0% | |
| !!! | ACCAGGACTATTTTGATTTG+TGG | + | chr2_4:50820950-50820969 | Msa0333190:CDS | 35.0% |
| !!! | CCAGGACTATTTTGATTTGT+GGG | + | chr2_4:50820951-50820970 | Msa0333190:CDS | 35.0% |
| TATCAAGTCATTGATACACC+TGG | + | chr2_4:50821097-50821116 | Msa0333190:CDS | 35.0% | |
| ATCAAGTCATTGATACACCT+GGG | + | chr2_4:50821098-50821117 | Msa0333190:CDS | 35.0% | |
| TTGTTGCACACAACAATCAA+AGG | - | chr2_4:50821298-50821317 | None:intergenic | 35.0% | |
| ! | ATATTCTGGCTGATGATGAA+TGG | + | chr2_4:50821746-50821765 | Msa0333190:CDS | 35.0% |
| ! | AATCTGCCAGAAATTTTGGA+TGG | + | chr2_4:50821778-50821797 | Msa0333190:CDS | 35.0% |
| TTGTGACCATCCAAAATTTC+TGG | - | chr2_4:50821787-50821806 | None:intergenic | 35.0% | |
| CTTGTCGAATTTCCTTGAAA+CGG | - | chr2_4:50822028-50822047 | None:intergenic | 35.0% | |
| CAGTTCACAACAGAAAGAAT+GGG | + | chr2_4:50822054-50822073 | Msa0333190:CDS | 35.0% | |
| CAAAGCAATTAAACTTGCGA+AGG | + | chr2_4:50822326-50822345 | Msa0333190:CDS | 35.0% | |
| TATACAAGTGCTTCGGTTTA+AGG | - | chr2_4:50822413-50822432 | None:intergenic | 35.0% | |
| TTTCCAGTATACAAGTGCTT+CGG | - | chr2_4:50822420-50822439 | None:intergenic | 35.0% | |
| CAATTTCAAGAAGATCACTG+TGG | + | chr2_4:50820460-50820479 | Msa0333190:CDS | 35.0% | |
| ! | CTTTTCGCATGTAGAATTGT+CGG | - | chr2_4:50820580-50820599 | None:intergenic | 35.0% |
| ! | GCTTTTCGTGAAAATTAGTC+TGG | - | chr2_4:50820613-50820632 | None:intergenic | 35.0% |
| TGAAGCAGATCACCATAAAA+AGG | - | chr2_4:50820680-50820699 | None:intergenic | 35.0% | |
| TTGGTCAGATTAATACTGCT+AGG | + | chr2_4:50820735-50820754 | Msa0333190:CDS | 35.0% | |
| CTGGTATTTGGATCAATTGA+AGG | - | chr2_4:50820935-50820954 | None:intergenic | 35.0% | |
| CTTCAATTGATCCAAATACC+AGG | + | chr2_4:50820933-50820952 | Msa0333190:CDS | 35.0% | |
| !!! | ACCAGGACTATTTTGATTTG+TGG | + | chr2_4:50820950-50820969 | Msa0333190:CDS | 35.0% |
| !!! | CCAGGACTATTTTGATTTGT+GGG | + | chr2_4:50820951-50820970 | Msa0333190:CDS | 35.0% |
| TATCAAGTCATTGATACACC+TGG | + | chr2_4:50821097-50821116 | Msa0333190:CDS | 35.0% | |
| ATCAAGTCATTGATACACCT+GGG | + | chr2_4:50821098-50821117 | Msa0333190:CDS | 35.0% | |
| TTGTTGCACACAACAATCAA+AGG | - | chr2_4:50821298-50821317 | None:intergenic | 35.0% | |
| ! | ATATTCTGGCTGATGATGAA+TGG | + | chr2_4:50821746-50821765 | Msa0333190:CDS | 35.0% |
| ! | AATCTGCCAGAAATTTTGGA+TGG | + | chr2_4:50821778-50821797 | Msa0333190:CDS | 35.0% |
| TTGTGACCATCCAAAATTTC+TGG | - | chr2_4:50821787-50821806 | None:intergenic | 35.0% | |
| CTTGTCGAATTTCCTTGAAA+CGG | - | chr2_4:50822028-50822047 | None:intergenic | 35.0% | |
| CAGTTCACAACAGAAAGAAT+GGG | + | chr2_4:50822054-50822073 | Msa0333190:CDS | 35.0% | |
| CAAAGCAATTAAACTTGCGA+AGG | + | chr2_4:50822326-50822345 | Msa0333190:CDS | 35.0% | |
| TATACAAGTGCTTCGGTTTA+AGG | - | chr2_4:50822413-50822432 | None:intergenic | 35.0% | |
| TTTCCAGTATACAAGTGCTT+CGG | - | chr2_4:50822420-50822439 | None:intergenic | 35.0% | |
| AAGATCACTGTGGTACCAAA+TGG | + | chr2_4:50820470-50820489 | Msa0333190:CDS | 40.0% | |
| GTGAAATTGCATAGCCTTTG+TGG | - | chr2_4:50820553-50820572 | None:intergenic | 40.0% | |
| ! | ACGAGGAAACTCATCGATTA+TGG | - | chr2_4:50820642-50820661 | None:intergenic | 40.0% |
| ! | GGGGACATTCATCCTTTTTA+TGG | + | chr2_4:50820665-50820684 | Msa0333190:CDS | 40.0% |
| GATCATTACAAGCTTGCACT+TGG | + | chr2_4:50820716-50820735 | Msa0333190:CDS | 40.0% | |
| GTATCGTTGTAAGTGCTTGA+AGG | + | chr2_4:50820817-50820836 | Msa0333190:CDS | 40.0% | |
| TGTACTGTGCTTAAGAGGAT+TGG | + | chr2_4:50820860-50820879 | Msa0333190:CDS | 40.0% | |
| GTACTGTGCTTAAGAGGATT+GGG | + | chr2_4:50820861-50820880 | Msa0333190:CDS | 40.0% | |
| TGTTCCAAATACGCCAAACT+CGG | - | chr2_4:50820887-50820906 | None:intergenic | 40.0% | |
| CCCACAAATCAAAATAGTCC+TGG | - | chr2_4:50820954-50820973 | None:intergenic | 40.0% | |
| ATTTGTGGGTATCCGAATGT+GGG | + | chr2_4:50820965-50820984 | Msa0333190:CDS | 40.0% | |
| AAGGAACTCTTTCCCACATT+CGG | - | chr2_4:50820980-50820999 | None:intergenic | 40.0% | |
| GACTTAGTGGTAAACGCATA+CGG | - | chr2_4:50821040-50821059 | None:intergenic | 40.0% | |
| ! | CATTGATACACCTGGGATTT+TGG | + | chr2_4:50821105-50821124 | Msa0333190:CDS | 40.0% |
| ! | ATACACCTGGGATTTTGGAT+AGG | + | chr2_4:50821110-50821129 | Msa0333190:CDS | 40.0% |
| AGCGGCAATATTGTTCTTCT+TGG | + | chr2_4:50821192-50821211 | Msa0333190:CDS | 40.0% | |
| TTGGATATATCAGGGTCTTG+TGG | + | chr2_4:50821211-50821230 | Msa0333190:CDS | 40.0% | |
| ! | TGGATATATCAGGGTCTTGT+GGG | + | chr2_4:50821212-50821231 | Msa0333190:CDS | 40.0% |
| TCCTCAGATAATCCATCCAA+CGG | - | chr2_4:50821334-50821353 | None:intergenic | 40.0% | |
| ATCTGAGGAGGATATGAAGT+TGG | + | chr2_4:50821345-50821364 | Msa0333190:CDS | 40.0% | |
| ! | TTGAAGACTTCGATTGGTCA+TGG | + | chr2_4:50821391-50821410 | Msa0333190:CDS | 40.0% |
| TCATCTTAATCTCAACCCTC+TGG | - | chr2_4:50821516-50821535 | None:intergenic | 40.0% | |
| AAATCAACGACTGTCTGAAC+AGG | + | chr2_4:50821545-50821564 | Msa0333190:CDS | 40.0% | |
| ! | TTTAGCTTCCAAAACTGCCA+GGG | - | chr2_4:50821626-50821645 | None:intergenic | 40.0% |
| GGAGAAGAGAAAAACTGAGA+AGG | + | chr2_4:50821666-50821685 | Msa0333190:CDS | 40.0% | |
| GAGAAAAACTGAGAAGGATC+TGG | + | chr2_4:50821672-50821691 | Msa0333190:CDS | 40.0% | |
| AAAAACTGAGAAGGATCTGG+AGG | + | chr2_4:50821675-50821694 | Msa0333190:CDS | 40.0% | |
| AAGGATCTGGAGGAAGAAAA+TGG | + | chr2_4:50821685-50821704 | Msa0333190:CDS | 40.0% | |
| TTGACCCTGACATTCTACAT+AGG | + | chr2_4:50821821-50821840 | Msa0333190:CDS | 40.0% | |
| TGACCCTGACATTCTACATA+GGG | + | chr2_4:50821822-50821841 | Msa0333190:CDS | 40.0% | |
| AAGAGTTGGAAAGAGAGGAA+GGG | + | chr2_4:50821848-50821867 | Msa0333190:CDS | 40.0% | |
| AGATGGAACTGAATTGACAC+CGG | + | chr2_4:50821909-50821928 | Msa0333190:CDS | 40.0% | |
| ! | AAGAGGCTTTAGCTGAGATT+AGG | + | chr2_4:50821938-50821957 | Msa0333190:CDS | 40.0% |
| ATTTCCTTGAAACGGTTGGT+CGG | - | chr2_4:50822020-50822039 | None:intergenic | 40.0% | |
| TCGAATTTCCTTGAAACGGT+TGG | - | chr2_4:50822024-50822043 | None:intergenic | 40.0% | |
| CGTTTCAAGGAAATTCGACA+AGG | + | chr2_4:50822026-50822045 | Msa0333190:CDS | 40.0% | |
| GCAGTTCACAACAGAAAGAA+TGG | + | chr2_4:50822053-50822072 | Msa0333190:CDS | 40.0% | |
| TCACAACAGAAAGAATGGGA+AGG | + | chr2_4:50822058-50822077 | Msa0333190:CDS | 40.0% | |
| ! | TCTTTTGAGCAGAATCCCTA+AGG | - | chr2_4:50822305-50822324 | None:intergenic | 40.0% |
| ! | GGCATTCTTGTTTCTCTTCT+TGG | - | chr2_4:50822358-50822377 | None:intergenic | 40.0% |
| ! | AAACCGAAGCACTTGTATAC+TGG | + | chr2_4:50822414-50822433 | Msa0333190:CDS | 40.0% |
| AAGATCACTGTGGTACCAAA+TGG | + | chr2_4:50820470-50820489 | Msa0333190:CDS | 40.0% | |
| GTGAAATTGCATAGCCTTTG+TGG | - | chr2_4:50820553-50820572 | None:intergenic | 40.0% | |
| ! | ACGAGGAAACTCATCGATTA+TGG | - | chr2_4:50820642-50820661 | None:intergenic | 40.0% |
| ! | GGGGACATTCATCCTTTTTA+TGG | + | chr2_4:50820665-50820684 | Msa0333190:CDS | 40.0% |
| GATCATTACAAGCTTGCACT+TGG | + | chr2_4:50820716-50820735 | Msa0333190:CDS | 40.0% | |
| GTATCGTTGTAAGTGCTTGA+AGG | + | chr2_4:50820817-50820836 | Msa0333190:CDS | 40.0% | |
| TGTACTGTGCTTAAGAGGAT+TGG | + | chr2_4:50820860-50820879 | Msa0333190:CDS | 40.0% | |
| GTACTGTGCTTAAGAGGATT+GGG | + | chr2_4:50820861-50820880 | Msa0333190:CDS | 40.0% | |
| TGTTCCAAATACGCCAAACT+CGG | - | chr2_4:50820887-50820906 | None:intergenic | 40.0% | |
| CCCACAAATCAAAATAGTCC+TGG | - | chr2_4:50820954-50820973 | None:intergenic | 40.0% | |
| ATTTGTGGGTATCCGAATGT+GGG | + | chr2_4:50820965-50820984 | Msa0333190:CDS | 40.0% | |
| AAGGAACTCTTTCCCACATT+CGG | - | chr2_4:50820980-50820999 | None:intergenic | 40.0% | |
| GACTTAGTGGTAAACGCATA+CGG | - | chr2_4:50821040-50821059 | None:intergenic | 40.0% | |
| ! | CATTGATACACCTGGGATTT+TGG | + | chr2_4:50821105-50821124 | Msa0333190:CDS | 40.0% |
| ! | ATACACCTGGGATTTTGGAT+AGG | + | chr2_4:50821110-50821129 | Msa0333190:CDS | 40.0% |
| AGCGGCAATATTGTTCTTCT+TGG | + | chr2_4:50821192-50821211 | Msa0333190:CDS | 40.0% | |
| TTGGATATATCAGGGTCTTG+TGG | + | chr2_4:50821211-50821230 | Msa0333190:CDS | 40.0% | |
| ! | TGGATATATCAGGGTCTTGT+GGG | + | chr2_4:50821212-50821231 | Msa0333190:CDS | 40.0% |
| TCCTCAGATAATCCATCCAA+CGG | - | chr2_4:50821334-50821353 | None:intergenic | 40.0% | |
| ATCTGAGGAGGATATGAAGT+TGG | + | chr2_4:50821345-50821364 | Msa0333190:CDS | 40.0% | |
| ! | TTGAAGACTTCGATTGGTCA+TGG | + | chr2_4:50821391-50821410 | Msa0333190:CDS | 40.0% |
| TCATCTTAATCTCAACCCTC+TGG | - | chr2_4:50821516-50821535 | None:intergenic | 40.0% | |
| AAATCAACGACTGTCTGAAC+AGG | + | chr2_4:50821545-50821564 | Msa0333190:CDS | 40.0% | |
| ! | TTTAGCTTCCAAAACTGCCA+GGG | - | chr2_4:50821626-50821645 | None:intergenic | 40.0% |
| GGAGAAGAGAAAAACTGAGA+AGG | + | chr2_4:50821666-50821685 | Msa0333190:CDS | 40.0% | |
| GAGAAAAACTGAGAAGGATC+TGG | + | chr2_4:50821672-50821691 | Msa0333190:CDS | 40.0% | |
| AAAAACTGAGAAGGATCTGG+AGG | + | chr2_4:50821675-50821694 | Msa0333190:CDS | 40.0% | |
| AAGGATCTGGAGGAAGAAAA+TGG | + | chr2_4:50821685-50821704 | Msa0333190:CDS | 40.0% | |
| TTGACCCTGACATTCTACAT+AGG | + | chr2_4:50821821-50821840 | Msa0333190:CDS | 40.0% | |
| TGACCCTGACATTCTACATA+GGG | + | chr2_4:50821822-50821841 | Msa0333190:CDS | 40.0% | |
| AAGAGTTGGAAAGAGAGGAA+GGG | + | chr2_4:50821848-50821867 | Msa0333190:CDS | 40.0% | |
| AGATGGAACTGAATTGACAC+CGG | + | chr2_4:50821909-50821928 | Msa0333190:CDS | 40.0% | |
| ! | AAGAGGCTTTAGCTGAGATT+AGG | + | chr2_4:50821938-50821957 | Msa0333190:CDS | 40.0% |
| ATTTCCTTGAAACGGTTGGT+CGG | - | chr2_4:50822020-50822039 | None:intergenic | 40.0% | |
| TCGAATTTCCTTGAAACGGT+TGG | - | chr2_4:50822024-50822043 | None:intergenic | 40.0% | |
| CGTTTCAAGGAAATTCGACA+AGG | + | chr2_4:50822026-50822045 | Msa0333190:CDS | 40.0% | |
| GCAGTTCACAACAGAAAGAA+TGG | + | chr2_4:50822053-50822072 | Msa0333190:CDS | 40.0% | |
| TCACAACAGAAAGAATGGGA+AGG | + | chr2_4:50822058-50822077 | Msa0333190:CDS | 40.0% | |
| ! | TCTTTTGAGCAGAATCCCTA+AGG | - | chr2_4:50822305-50822324 | None:intergenic | 40.0% |
| ! | GGCATTCTTGTTTCTCTTCT+TGG | - | chr2_4:50822358-50822377 | None:intergenic | 40.0% |
| ! | AAACCGAAGCACTTGTATAC+TGG | + | chr2_4:50822414-50822433 | Msa0333190:CDS | 40.0% |
| ACACCAACTGTTGTCCACAA+AGG | + | chr2_4:50820536-50820555 | Msa0333190:CDS | 45.0% | |
| TAGCCTTTGTGGACAACAGT+TGG | - | chr2_4:50820542-50820561 | None:intergenic | 45.0% | |
| ATCGATGAGTTTCCTCGTCT+TGG | + | chr2_4:50820644-50820663 | Msa0333190:CDS | 45.0% | |
| TCGATGAGTTTCCTCGTCTT+GGG | + | chr2_4:50820645-50820664 | Msa0333190:CDS | 45.0% | |
| GGATGTGTACTGTGCTTAAG+AGG | + | chr2_4:50820855-50820874 | Msa0333190:CDS | 45.0% | |
| ! | GAGTTTGGCGTATTTGGAAC+AGG | + | chr2_4:50820886-50820905 | Msa0333190:CDS | 45.0% |
| ! | TGGCGTATTTGGAACAGGTT+AGG | + | chr2_4:50820891-50820910 | Msa0333190:CDS | 45.0% |
| GATTTGTGGGTATCCGAATG+TGG | + | chr2_4:50820964-50820983 | Msa0333190:CDS | 45.0% | |
| TACCACTAAGTCGCTGTTTG+TGG | + | chr2_4:50821048-50821067 | Msa0333190:CDS | 45.0% | |
| ACCACTAAGTCGCTGTTTGT+GGG | + | chr2_4:50821049-50821068 | Msa0333190:CDS | 45.0% | |
| ! | GATTTTGGATAGGCCGTTTG+AGG | + | chr2_4:50821120-50821139 | Msa0333190:CDS | 45.0% |
| TGGGTATACTATTGCTCAGC+AGG | + | chr2_4:50821231-50821250 | Msa0333190:CDS | 45.0% | |
| GTATACTATTGCTCAGCAGG+CGG | + | chr2_4:50821234-50821253 | Msa0333190:CDS | 45.0% | |
| !! | GTTGGATGGATTATCTGAGG+AGG | + | chr2_4:50821333-50821352 | Msa0333190:CDS | 45.0% |
| !! | GAAGCGTTGAAGACTTCGAT+TGG | + | chr2_4:50821385-50821404 | Msa0333190:CDS | 45.0% |
| ! | AAGACTTCGATTGGTCATGG+AGG | + | chr2_4:50821394-50821413 | Msa0333190:CDS | 45.0% |
| TTCTTCAGTCAACGCACTCA+TGG | - | chr2_4:50821449-50821468 | None:intergenic | 45.0% | |
| !! | ATGAGTGCGTTGACTGAAGA+AGG | + | chr2_4:50821448-50821467 | Msa0333190:CDS | 45.0% |
| ! | GACTGAAGAAGGTGTGATTG+CGG | + | chr2_4:50821459-50821478 | Msa0333190:CDS | 45.0% |
| TGAGAGATTGCTGAACCAGA+GGG | + | chr2_4:50821498-50821517 | Msa0333190:CDS | 45.0% | |
| AAAACTGCCAGGGGAATACA+CGG | - | chr2_4:50821616-50821635 | None:intergenic | 45.0% | |
| TTAGCTTCCAAAACTGCCAG+GGG | - | chr2_4:50821625-50821644 | None:intergenic | 45.0% | |
| ! | CTTTAGCTTCCAAAACTGCC+AGG | - | chr2_4:50821627-50821646 | None:intergenic | 45.0% |
| GATCTGGAGGAAGAAAATGG+AGG | + | chr2_4:50821688-50821707 | Msa0333190:CDS | 45.0% | |
| CCACCCTATGTAGAATGTCA+GGG | - | chr2_4:50821828-50821847 | None:intergenic | 45.0% | |
| TCCACCCTATGTAGAATGTC+AGG | - | chr2_4:50821829-50821848 | None:intergenic | 45.0% | |
| TCTACATAGGGTGGAAGAGT+TGG | + | chr2_4:50821834-50821853 | Msa0333190:CDS | 45.0% | |
| GAAGAGTTGGAAAGAGAGGA+AGG | + | chr2_4:50821847-50821866 | Msa0333190:CDS | 45.0% | |
| TGGAAAGAGAGGAAGGGTTA+AGG | + | chr2_4:50821854-50821873 | Msa0333190:CDS | 45.0% | |
| ! | AGGCTTTAGCTGAGATTAGG+AGG | + | chr2_4:50821941-50821960 | Msa0333190:CDS | 45.0% |
| CAAGGAAATTCGACAAGGAC+AGG | + | chr2_4:50822031-50822050 | Msa0333190:CDS | 45.0% | |
| TCTTGGGCTTGATCCTTCTA+TGG | + | chr2_4:50822092-50822111 | Msa0333190:CDS | 45.0% | |
| AGCAGATCTGCATCTAGGAA+AGG | + | chr2_4:50822132-50822151 | Msa0333190:CDS | 45.0% | |
| GATCTGCATCTAGGAAAGGT+CGG | + | chr2_4:50822136-50822155 | Msa0333190:CDS | 45.0% | |
| ATCTAGGAAAGGTCGGAAGA+GGG | + | chr2_4:50822143-50822162 | Msa0333190:CDS | 45.0% | |
| TCACCAGAAGGAAGAAACGA+TGG | + | chr2_4:50822171-50822190 | Msa0333190:CDS | 45.0% | |
| CACCAGAAGGAAGAAACGAT+GGG | + | chr2_4:50822172-50822191 | Msa0333190:CDS | 45.0% | |
| ATCCCATCGTTTCTTCCTTC+TGG | - | chr2_4:50822177-50822196 | None:intergenic | 45.0% | |
| AGAAGGAAGAAACGATGGGA+TGG | + | chr2_4:50822176-50822195 | Msa0333190:CDS | 45.0% | |
| CAGGAACAACTTCATGTGGT+GGG | - | chr2_4:50822275-50822294 | None:intergenic | 45.0% | |
| TCTCCAGGAACAACTTCATG+TGG | - | chr2_4:50822279-50822298 | None:intergenic | 45.0% | |
| ACATGAAGTTGTTCCTGGAG+AGG | + | chr2_4:50822278-50822297 | Msa0333190:CDS | 45.0% | |
| CATGAAGTTGTTCCTGGAGA+GGG | + | chr2_4:50822279-50822298 | Msa0333190:CDS | 45.0% | |
| AGAAACAAGAATGCCAAGCG+TGG | + | chr2_4:50822363-50822382 | Msa0333190:CDS | 45.0% | |
| !! | TATACTGGAAAGCGCTCCAA+CGG | + | chr2_4:50822429-50822448 | Msa0333190:CDS | 45.0% |
| ACACCAACTGTTGTCCACAA+AGG | + | chr2_4:50820536-50820555 | Msa0333190:CDS | 45.0% | |
| TAGCCTTTGTGGACAACAGT+TGG | - | chr2_4:50820542-50820561 | None:intergenic | 45.0% | |
| ATCGATGAGTTTCCTCGTCT+TGG | + | chr2_4:50820644-50820663 | Msa0333190:CDS | 45.0% | |
| TCGATGAGTTTCCTCGTCTT+GGG | + | chr2_4:50820645-50820664 | Msa0333190:CDS | 45.0% | |
| GGATGTGTACTGTGCTTAAG+AGG | + | chr2_4:50820855-50820874 | Msa0333190:CDS | 45.0% | |
| ! | GAGTTTGGCGTATTTGGAAC+AGG | + | chr2_4:50820886-50820905 | Msa0333190:CDS | 45.0% |
| ! | TGGCGTATTTGGAACAGGTT+AGG | + | chr2_4:50820891-50820910 | Msa0333190:CDS | 45.0% |
| GATTTGTGGGTATCCGAATG+TGG | + | chr2_4:50820964-50820983 | Msa0333190:CDS | 45.0% | |
| TACCACTAAGTCGCTGTTTG+TGG | + | chr2_4:50821048-50821067 | Msa0333190:CDS | 45.0% | |
| ACCACTAAGTCGCTGTTTGT+GGG | + | chr2_4:50821049-50821068 | Msa0333190:CDS | 45.0% | |
| ! | GATTTTGGATAGGCCGTTTG+AGG | + | chr2_4:50821120-50821139 | Msa0333190:CDS | 45.0% |
| TGGGTATACTATTGCTCAGC+AGG | + | chr2_4:50821231-50821250 | Msa0333190:CDS | 45.0% | |
| GTATACTATTGCTCAGCAGG+CGG | + | chr2_4:50821234-50821253 | Msa0333190:CDS | 45.0% | |
| !! | GTTGGATGGATTATCTGAGG+AGG | + | chr2_4:50821333-50821352 | Msa0333190:CDS | 45.0% |
| !! | GAAGCGTTGAAGACTTCGAT+TGG | + | chr2_4:50821385-50821404 | Msa0333190:CDS | 45.0% |
| ! | AAGACTTCGATTGGTCATGG+AGG | + | chr2_4:50821394-50821413 | Msa0333190:CDS | 45.0% |
| TTCTTCAGTCAACGCACTCA+TGG | - | chr2_4:50821449-50821468 | None:intergenic | 45.0% | |
| !! | ATGAGTGCGTTGACTGAAGA+AGG | + | chr2_4:50821448-50821467 | Msa0333190:CDS | 45.0% |
| ! | GACTGAAGAAGGTGTGATTG+CGG | + | chr2_4:50821459-50821478 | Msa0333190:CDS | 45.0% |
| TGAGAGATTGCTGAACCAGA+GGG | + | chr2_4:50821498-50821517 | Msa0333190:CDS | 45.0% | |
| AAAACTGCCAGGGGAATACA+CGG | - | chr2_4:50821616-50821635 | None:intergenic | 45.0% | |
| TTAGCTTCCAAAACTGCCAG+GGG | - | chr2_4:50821625-50821644 | None:intergenic | 45.0% | |
| ! | CTTTAGCTTCCAAAACTGCC+AGG | - | chr2_4:50821627-50821646 | None:intergenic | 45.0% |
| GATCTGGAGGAAGAAAATGG+AGG | + | chr2_4:50821688-50821707 | Msa0333190:CDS | 45.0% | |
| CCACCCTATGTAGAATGTCA+GGG | - | chr2_4:50821828-50821847 | None:intergenic | 45.0% | |
| TCCACCCTATGTAGAATGTC+AGG | - | chr2_4:50821829-50821848 | None:intergenic | 45.0% | |
| TCTACATAGGGTGGAAGAGT+TGG | + | chr2_4:50821834-50821853 | Msa0333190:CDS | 45.0% | |
| GAAGAGTTGGAAAGAGAGGA+AGG | + | chr2_4:50821847-50821866 | Msa0333190:CDS | 45.0% | |
| TGGAAAGAGAGGAAGGGTTA+AGG | + | chr2_4:50821854-50821873 | Msa0333190:CDS | 45.0% | |
| ! | AGGCTTTAGCTGAGATTAGG+AGG | + | chr2_4:50821941-50821960 | Msa0333190:CDS | 45.0% |
| CAAGGAAATTCGACAAGGAC+AGG | + | chr2_4:50822031-50822050 | Msa0333190:CDS | 45.0% | |
| TCTTGGGCTTGATCCTTCTA+TGG | + | chr2_4:50822092-50822111 | Msa0333190:CDS | 45.0% | |
| AGCAGATCTGCATCTAGGAA+AGG | + | chr2_4:50822132-50822151 | Msa0333190:CDS | 45.0% | |
| GATCTGCATCTAGGAAAGGT+CGG | + | chr2_4:50822136-50822155 | Msa0333190:CDS | 45.0% | |
| ATCTAGGAAAGGTCGGAAGA+GGG | + | chr2_4:50822143-50822162 | Msa0333190:CDS | 45.0% | |
| TCACCAGAAGGAAGAAACGA+TGG | + | chr2_4:50822171-50822190 | Msa0333190:CDS | 45.0% | |
| CACCAGAAGGAAGAAACGAT+GGG | + | chr2_4:50822172-50822191 | Msa0333190:CDS | 45.0% | |
| ATCCCATCGTTTCTTCCTTC+TGG | - | chr2_4:50822177-50822196 | None:intergenic | 45.0% | |
| AGAAGGAAGAAACGATGGGA+TGG | + | chr2_4:50822176-50822195 | Msa0333190:CDS | 45.0% | |
| CAGGAACAACTTCATGTGGT+GGG | - | chr2_4:50822275-50822294 | None:intergenic | 45.0% | |
| TCTCCAGGAACAACTTCATG+TGG | - | chr2_4:50822279-50822298 | None:intergenic | 45.0% | |
| ACATGAAGTTGTTCCTGGAG+AGG | + | chr2_4:50822278-50822297 | Msa0333190:CDS | 45.0% | |
| CATGAAGTTGTTCCTGGAGA+GGG | + | chr2_4:50822279-50822298 | Msa0333190:CDS | 45.0% | |
| AGAAACAAGAATGCCAAGCG+TGG | + | chr2_4:50822363-50822382 | Msa0333190:CDS | 45.0% | |
| !! | TATACTGGAAAGCGCTCCAA+CGG | + | chr2_4:50822429-50822448 | Msa0333190:CDS | 45.0% |
| CGATGAGTTTCCTCGTCTTG+GGG | + | chr2_4:50820646-50820665 | Msa0333190:CDS | 50.0% | |
| TGCTTGAAGGTTGCTGCTCT+TGG | + | chr2_4:50820830-50820849 | Msa0333190:CDS | 50.0% | |
| GCTTGAAGGTTGCTGCTCTT+GGG | + | chr2_4:50820831-50820850 | Msa0333190:CDS | 50.0% | |
| TAAGAGGATTGGGCCGAGTT+TGG | + | chr2_4:50820871-50820890 | Msa0333190:CDS | 50.0% | |
| GGAACAGGTTAGGCAGCATA+TGG | + | chr2_4:50820901-50820920 | Msa0333190:CDS | 50.0% | |
| AGGTTAGGCAGCATATGGCT+AGG | + | chr2_4:50820906-50820925 | Msa0333190:CDS | 50.0% | |
| ACCCACAAACAGCGACTTAG+TGG | - | chr2_4:50821053-50821072 | None:intergenic | 50.0% | |
| GTCGCTGTTTGTGGGTCATA+CGG | + | chr2_4:50821057-50821076 | Msa0333190:CDS | 50.0% | |
| AACGGCCTATCCAAAATCCC+AGG | - | chr2_4:50821118-50821137 | None:intergenic | 50.0% | |
| TGGATAGGCCGTTTGAGGAT+CGG | + | chr2_4:50821125-50821144 | Msa0333190:CDS | 50.0% | |
| TGCTCTTGCGCATTTGAGAG+CGG | + | chr2_4:50821174-50821193 | Msa0333190:CDS | 50.0% | |
| !! | CAAGACTGATTTGCAGCCGT+TGG | + | chr2_4:50821315-50821334 | Msa0333190:CDS | 50.0% |
| !! | ACTGATTTGCAGCCGTTGGA+TGG | + | chr2_4:50821319-50821338 | Msa0333190:CDS | 50.0% |
| !! | GCCGTTGGATGGATTATCTG+AGG | + | chr2_4:50821330-50821349 | Msa0333190:CDS | 50.0% |
| CTGGTTCAGCAATCTCTCAC+AGG | - | chr2_4:50821497-50821516 | None:intergenic | 50.0% | |
| GTGAGAGATTGCTGAACCAG+AGG | + | chr2_4:50821497-50821516 | Msa0333190:CDS | 50.0% | |
| TCCTTCTGGTCACGTGGTTT+CGG | - | chr2_4:50821586-50821605 | None:intergenic | 50.0% | |
| TACACGGAGGTCTTTCCTTC+TGG | - | chr2_4:50821600-50821619 | None:intergenic | 50.0% | |
| ! | GTGTATTCCCCTGGCAGTTT+TGG | + | chr2_4:50821615-50821634 | Msa0333190:CDS | 50.0% |
| ! | GAGGAAGAAAATGGAGGTGC+TGG | + | chr2_4:50821694-50821713 | Msa0333190:CDS | 50.0% |
| CCCTGACATTCTACATAGGG+TGG | + | chr2_4:50821825-50821844 | Msa0333190:CDS | 50.0% | |
| GGTGGAAGAGTTGGAAAGAG+AGG | + | chr2_4:50821843-50821862 | Msa0333190:CDS | 50.0% | |
| AAGAGAGGAAGGGTTAAGGC+AGG | + | chr2_4:50821858-50821877 | Msa0333190:CDS | 50.0% | |
| ATTGACACCGGAACAGCAAG+AGG | + | chr2_4:50821921-50821940 | Msa0333190:CDS | 50.0% | |
| !! | GCTAAAGCCTCTTGCTGTTC+CGG | - | chr2_4:50821931-50821950 | None:intergenic | 50.0% |
| TGCGTAGCAGATCTGCATCT+AGG | + | chr2_4:50822127-50822146 | Msa0333190:CDS | 50.0% | |
| CATCTAGGAAAGGTCGGAAG+AGG | + | chr2_4:50822142-50822161 | Msa0333190:CDS | 50.0% | |
| AAGAGGGAGAGATCACCAGA+AGG | + | chr2_4:50822159-50822178 | Msa0333190:CDS | 50.0% | |
| !! | CTGAGACGCTGTTTCTTGCT+AGG | - | chr2_4:50822219-50822238 | None:intergenic | 50.0% |
| GTAGATCACTGTCTCGTTCC+AGG | + | chr2_4:50822238-50822257 | Msa0333190:CDS | 50.0% | |
| ATCACTGTCTCGTTCCAGGT+CGG | + | chr2_4:50822242-50822261 | Msa0333190:CDS | 50.0% | |
| !! | AACAACTTCATGTGGTGGGC+GGG | - | chr2_4:50822271-50822290 | None:intergenic | 50.0% |
| ! | GAACAACTTCATGTGGTGGG+CGG | - | chr2_4:50822272-50822291 | None:intergenic | 50.0% |
| CCAGGAACAACTTCATGTGG+TGG | - | chr2_4:50822276-50822295 | None:intergenic | 50.0% | |
| CCACCACATGAAGTTGTTCC+TGG | + | chr2_4:50822273-50822292 | Msa0333190:CDS | 50.0% | |
| TCTATCAGCTTCTCCACGCT+TGG | - | chr2_4:50822379-50822398 | None:intergenic | 50.0% | |
| CGATGAGTTTCCTCGTCTTG+GGG | + | chr2_4:50820646-50820665 | Msa0333190:CDS | 50.0% | |
| TGCTTGAAGGTTGCTGCTCT+TGG | + | chr2_4:50820830-50820849 | Msa0333190:CDS | 50.0% | |
| GCTTGAAGGTTGCTGCTCTT+GGG | + | chr2_4:50820831-50820850 | Msa0333190:CDS | 50.0% | |
| TAAGAGGATTGGGCCGAGTT+TGG | + | chr2_4:50820871-50820890 | Msa0333190:CDS | 50.0% | |
| GGAACAGGTTAGGCAGCATA+TGG | + | chr2_4:50820901-50820920 | Msa0333190:CDS | 50.0% | |
| AGGTTAGGCAGCATATGGCT+AGG | + | chr2_4:50820906-50820925 | Msa0333190:CDS | 50.0% | |
| ACCCACAAACAGCGACTTAG+TGG | - | chr2_4:50821053-50821072 | None:intergenic | 50.0% | |
| GTCGCTGTTTGTGGGTCATA+CGG | + | chr2_4:50821057-50821076 | Msa0333190:CDS | 50.0% | |
| AACGGCCTATCCAAAATCCC+AGG | - | chr2_4:50821118-50821137 | None:intergenic | 50.0% | |
| TGGATAGGCCGTTTGAGGAT+CGG | + | chr2_4:50821125-50821144 | Msa0333190:CDS | 50.0% | |
| TGCTCTTGCGCATTTGAGAG+CGG | + | chr2_4:50821174-50821193 | Msa0333190:CDS | 50.0% | |
| !! | CAAGACTGATTTGCAGCCGT+TGG | + | chr2_4:50821315-50821334 | Msa0333190:CDS | 50.0% |
| !! | ACTGATTTGCAGCCGTTGGA+TGG | + | chr2_4:50821319-50821338 | Msa0333190:CDS | 50.0% |
| !! | GCCGTTGGATGGATTATCTG+AGG | + | chr2_4:50821330-50821349 | Msa0333190:CDS | 50.0% |
| CTGGTTCAGCAATCTCTCAC+AGG | - | chr2_4:50821497-50821516 | None:intergenic | 50.0% | |
| GTGAGAGATTGCTGAACCAG+AGG | + | chr2_4:50821497-50821516 | Msa0333190:CDS | 50.0% | |
| TCCTTCTGGTCACGTGGTTT+CGG | - | chr2_4:50821586-50821605 | None:intergenic | 50.0% | |
| TACACGGAGGTCTTTCCTTC+TGG | - | chr2_4:50821600-50821619 | None:intergenic | 50.0% | |
| ! | GTGTATTCCCCTGGCAGTTT+TGG | + | chr2_4:50821615-50821634 | Msa0333190:CDS | 50.0% |
| ! | GAGGAAGAAAATGGAGGTGC+TGG | + | chr2_4:50821694-50821713 | Msa0333190:CDS | 50.0% |
| CCCTGACATTCTACATAGGG+TGG | + | chr2_4:50821825-50821844 | Msa0333190:CDS | 50.0% | |
| GGTGGAAGAGTTGGAAAGAG+AGG | + | chr2_4:50821843-50821862 | Msa0333190:CDS | 50.0% | |
| AAGAGAGGAAGGGTTAAGGC+AGG | + | chr2_4:50821858-50821877 | Msa0333190:CDS | 50.0% | |
| ATTGACACCGGAACAGCAAG+AGG | + | chr2_4:50821921-50821940 | Msa0333190:CDS | 50.0% | |
| !! | GCTAAAGCCTCTTGCTGTTC+CGG | - | chr2_4:50821931-50821950 | None:intergenic | 50.0% |
| TGCGTAGCAGATCTGCATCT+AGG | + | chr2_4:50822127-50822146 | Msa0333190:CDS | 50.0% | |
| CATCTAGGAAAGGTCGGAAG+AGG | + | chr2_4:50822142-50822161 | Msa0333190:CDS | 50.0% | |
| AAGAGGGAGAGATCACCAGA+AGG | + | chr2_4:50822159-50822178 | Msa0333190:CDS | 50.0% | |
| !! | CTGAGACGCTGTTTCTTGCT+AGG | - | chr2_4:50822219-50822238 | None:intergenic | 50.0% |
| GTAGATCACTGTCTCGTTCC+AGG | + | chr2_4:50822238-50822257 | Msa0333190:CDS | 50.0% | |
| ATCACTGTCTCGTTCCAGGT+CGG | + | chr2_4:50822242-50822261 | Msa0333190:CDS | 50.0% | |
| !! | AACAACTTCATGTGGTGGGC+GGG | - | chr2_4:50822271-50822290 | None:intergenic | 50.0% |
| ! | GAACAACTTCATGTGGTGGG+CGG | - | chr2_4:50822272-50822291 | None:intergenic | 50.0% |
| CCAGGAACAACTTCATGTGG+TGG | - | chr2_4:50822276-50822295 | None:intergenic | 50.0% | |
| CCACCACATGAAGTTGTTCC+TGG | + | chr2_4:50822273-50822292 | Msa0333190:CDS | 50.0% | |
| TCTATCAGCTTCTCCACGCT+TGG | - | chr2_4:50822379-50822398 | None:intergenic | 50.0% | |
| GGATGAATGTCCCCAAGACG+AGG | - | chr2_4:50820659-50820678 | None:intergenic | 55.0% | |
| TGAAGGTTGCTGCTCTTGGG+AGG | + | chr2_4:50820834-50820853 | Msa0333190:CDS | 55.0% | |
| TGGGCCGAGTTTGGCGTATT+TGG | + | chr2_4:50820880-50820899 | Msa0333190:CDS | 55.0% | |
| ! | TTCGATTGGTCATGGAGGCG+AGG | + | chr2_4:50821399-50821418 | Msa0333190:CDS | 55.0% |
| ! | TCGATTGGTCATGGAGGCGA+GGG | + | chr2_4:50821400-50821419 | Msa0333190:CDS | 55.0% |
| TCCGAAACCACGTGACCAGA+AGG | + | chr2_4:50821582-50821601 | Msa0333190:CDS | 55.0% | |
| GGTCTTTCCTTCTGGTCACG+TGG | - | chr2_4:50821592-50821611 | None:intergenic | 55.0% | |
| AAGACCTCCGTGTATTCCCC+TGG | + | chr2_4:50821606-50821625 | Msa0333190:CDS | 55.0% | |
| AGCTAAGCAAGCAGCTGCTG+AGG | + | chr2_4:50821645-50821664 | Msa0333190:CDS | 55.0% | |
| AGAGCCGACCAACCGTTTCA+AGG | + | chr2_4:50822013-50822032 | Msa0333190:CDS | 55.0% | |
| GAAGGCAGCTGTCGTCTCTT+GGG | + | chr2_4:50822076-50822095 | Msa0333190:CDS | 55.0% | |
| TTGTTCCTGGAGAGGGCCTT+AGG | + | chr2_4:50822286-50822305 | Msa0333190:CDS | 55.0% | |
| TGTTCCTGGAGAGGGCCTTA+GGG | + | chr2_4:50822287-50822306 | Msa0333190:CDS | 55.0% | |
| GCTCCAACGGAAAGACAGAC+AGG | + | chr2_4:50822442-50822461 | Msa0333190:CDS | 55.0% | |
| GGATGAATGTCCCCAAGACG+AGG | - | chr2_4:50820659-50820678 | None:intergenic | 55.0% | |
| TGAAGGTTGCTGCTCTTGGG+AGG | + | chr2_4:50820834-50820853 | Msa0333190:CDS | 55.0% | |
| TGGGCCGAGTTTGGCGTATT+TGG | + | chr2_4:50820880-50820899 | Msa0333190:CDS | 55.0% | |
| ! | TTCGATTGGTCATGGAGGCG+AGG | + | chr2_4:50821399-50821418 | Msa0333190:CDS | 55.0% |
| ! | TCGATTGGTCATGGAGGCGA+GGG | + | chr2_4:50821400-50821419 | Msa0333190:CDS | 55.0% |
| TCCGAAACCACGTGACCAGA+AGG | + | chr2_4:50821582-50821601 | Msa0333190:CDS | 55.0% | |
| GGTCTTTCCTTCTGGTCACG+TGG | - | chr2_4:50821592-50821611 | None:intergenic | 55.0% | |
| AAGACCTCCGTGTATTCCCC+TGG | + | chr2_4:50821606-50821625 | Msa0333190:CDS | 55.0% | |
| AGCTAAGCAAGCAGCTGCTG+AGG | + | chr2_4:50821645-50821664 | Msa0333190:CDS | 55.0% | |
| AGAGCCGACCAACCGTTTCA+AGG | + | chr2_4:50822013-50822032 | Msa0333190:CDS | 55.0% | |
| GAAGGCAGCTGTCGTCTCTT+GGG | + | chr2_4:50822076-50822095 | Msa0333190:CDS | 55.0% | |
| TTGTTCCTGGAGAGGGCCTT+AGG | + | chr2_4:50822286-50822305 | Msa0333190:CDS | 55.0% | |
| TGTTCCTGGAGAGGGCCTTA+GGG | + | chr2_4:50822287-50822306 | Msa0333190:CDS | 55.0% | |
| GCTCCAACGGAAAGACAGAC+AGG | + | chr2_4:50822442-50822461 | Msa0333190:CDS | 55.0% | |
| ! | CGATTGGTCATGGAGGCGAG+GGG | + | chr2_4:50821401-50821420 | Msa0333190:CDS | 60.0% |
| ACTGCCAGGGGAATACACGG+AGG | - | chr2_4:50821613-50821632 | None:intergenic | 60.0% | |
| GGAAGGCAGCTGTCGTCTCT+TGG | + | chr2_4:50822075-50822094 | Msa0333190:CDS | 60.0% | |
| GAATCCCTAAGGCCCTCTCC+AGG | - | chr2_4:50822294-50822313 | None:intergenic | 60.0% | |
| GCGCCTGTCTGTCTTTCCGT+TGG | - | chr2_4:50822448-50822467 | None:intergenic | 60.0% | |
| ! | CGATTGGTCATGGAGGCGAG+GGG | + | chr2_4:50821401-50821420 | Msa0333190:CDS | 60.0% |
| ACTGCCAGGGGAATACACGG+AGG | - | chr2_4:50821613-50821632 | None:intergenic | 60.0% | |
| GGAAGGCAGCTGTCGTCTCT+TGG | + | chr2_4:50822075-50822094 | Msa0333190:CDS | 60.0% | |
| GAATCCCTAAGGCCCTCTCC+AGG | - | chr2_4:50822294-50822313 | None:intergenic | 60.0% | |
| GCGCCTGTCTGTCTTTCCGT+TGG | - | chr2_4:50822448-50822467 | None:intergenic | 60.0% | |
| ! | TGGTGGGCGGGAGACCGACC+TGG | - | chr2_4:50822259-50822278 | None:intergenic | 75.0% |
| ! | TGGTGGGCGGGAGACCGACC+TGG | - | chr2_4:50822259-50822278 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 50820449 | 50822470 | 50820449 | ID=Msa0333190;Name=Msa0333190 |
| chr2_4 | mRNA | 50820449 | 50822470 | 50820449 | ID=Msa0333190-mRNA-1;Parent=Msa0333190;Name=Msa0333190-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|-1|0|1|-1|1|1|0|673 |
| chr2_4 | exon | 50820449 | 50822470 | 50820449 | ID=Msa0333190-mRNA-1:exon:15151;Parent=Msa0333190-mRNA-1 |
| chr2_4 | CDS | 50820449 | 50822470 | 50820449 | ID=Msa0333190-mRNA-1:cds;Parent=Msa0333190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
