AlfalfaGEDB | Msa0490820

M. sativa cultivar zhongmu-4 / Msa0490820

KEGG: K02966
GO: GO:0000028 GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0005911 GO:0006996 GO:0008150 GO:0009506 GO:0009987 GO:0015935 GO:0016043 GO:0022607 GO:0022613 GO:0022618 GO:0022626 GO:0022627 GO:0030054 GO:0030312 GO:0032991 GO:0034622 GO:0042254 GO:0042255 GO:0042274 GO:0042788 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043933 GO:0044085 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0055044 GO:0065003 GO:0070925 GO:0071826 GO:0071840 GO:0071944 GO:1990904
PFAM: PF01090.22

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0490820	XP_013458956.1	99.301	143	1	0	1	143	1	143	1.66e-101	297

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0490820	sp\|Q9FNP8\|RS193_ARATH	83.099	142	24	0	1	142	1	142	1.33e-89	259

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0490820	A0A072UT55	99.301	143	1	0	1	143	1	143	7.91e-102	297

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0027580	Msa0490820	0.808322	3.278009e-50	-8.615850e-47
Msa0031510	Msa0490820	0.811956	5.401720e-51	-8.615850e-47
Msa0032810	Msa0490820	0.842486	2.511502e-58	-8.615850e-47
Msa0033880	Msa0490820	0.808909	2.456140e-50	-8.615850e-47
Msa0042280	Msa0490820	0.802281	6.044696e-49	-8.615850e-47
Msa0068020	Msa0490820	0.840467	8.545621e-58	-8.615850e-47
Msa0075340	Msa0490820	0.808749	2.657419e-50	-8.615850e-47
Msa0076040	Msa0490820	0.804254	2.359469e-49	-8.615850e-47
Msa0077010	Msa0490820	0.873883	1.040670e-67	-8.615850e-47
Msa0082280	Msa0490820	0.818206	2.212739e-52	-8.615850e-47
Msa0113240	Msa0490820	0.853039	3.109561e-61	-8.615850e-47
Msa0115370	Msa0490820	0.805004	1.645840e-49	-8.615850e-47
Msa0126520	Msa0490820	0.803628	3.184098e-49	-8.615850e-47
Msa0127850	Msa0490820	0.813121	3.004551e-51	-8.615850e-47
Msa0128860	Msa0490820	0.809297	2.028178e-50	-8.615850e-47
Msa0142110	Msa0490820	0.819615	1.058349e-52	-8.615850e-47
Msa0165950	Msa0490820	0.829741	4.344953e-55	-8.615850e-47
Msa0166750	Msa0490820	0.828244	1.001531e-54	-8.615850e-47
Msa0167480	Msa0490820	0.863328	2.693323e-64	-8.615850e-47
Msa0174000	Msa0490820	0.803774	2.968523e-49	-8.615850e-47
Msa0174730	Msa0490820	0.805577	1.248381e-49	-8.615850e-47
Msa0174770	Msa0490820	0.836535	8.841887e-57	-8.615850e-47
Msa0181610	Msa0490820	0.819433	1.164276e-52	-8.615850e-47
Msa0199690	Msa0490820	0.807809	4.215237e-50	-8.615850e-47
Msa0211840	Msa0490820	0.823905	1.077014e-53	-8.615850e-47
Msa0219120	Msa0490820	0.843445	1.394759e-58	-8.615850e-47
Msa0221030	Msa0490820	0.802856	4.599236e-49	-8.615850e-47
Msa0224560	Msa0490820	0.853125	2.938874e-61	-8.615850e-47
Msa0226460	Msa0490820	0.804411	2.187855e-49	-8.615850e-47
Msa0231100	Msa0490820	0.831111	2.008292e-55	-8.615850e-47
Msa0231710	Msa0490820	0.822526	2.260413e-53	-8.615850e-47
Msa0367910	Msa0490820	0.803413	3.528306e-49	-8.615850e-47
Msa0423750	Msa0490820	0.813760	2.174792e-51	-8.615850e-47
Msa0443390	Msa0490820	0.827871	1.231485e-54	-8.615850e-47
Msa0258850	Msa0490820	0.833813	4.298580e-56	-8.615850e-47
Msa0262480	Msa0490820	0.833268	5.880846e-56	-8.615850e-47
Msa0280430	Msa0490820	0.835610	1.517828e-56	-8.615850e-47
Msa0291520	Msa0490820	0.807082	6.013990e-50	-8.615850e-47
Msa0296250	Msa0490820	0.808040	3.764555e-50	-8.615850e-47
Msa0298200	Msa0490820	0.841534	4.484065e-58	-8.615850e-47
Msa0300350	Msa0490820	0.806097	9.706008e-50	-8.615850e-47
Msa0304590	Msa0490820	0.813880	2.045406e-51	-8.615850e-47
Msa0304660	Msa0490820	0.823114	1.648985e-53	-8.615850e-47
Msa0331700	Msa0490820	0.824703	6.990646e-54	-8.615850e-47
Msa0333190	Msa0490820	0.820861	5.485307e-53	-8.615850e-47
Msa0348830	Msa0490820	0.828395	9.208975e-55	-8.615850e-47
Msa0358770	Msa0490820	0.802325	5.919682e-49	-8.615850e-47
Msa0490820	Msa0498560	0.809267	2.058670e-50	-8.615850e-47
Msa0490820	Msa0526540	0.807970	3.896943e-50	-8.615850e-47
Msa0490820	Msa0531650	0.842644	2.279369e-58	-8.615850e-47
Msa0490820	Msa0534750	0.912237	2.451265e-83	-8.615850e-47
Msa0490820	Msa0561430	0.828271	9.863161e-55	-8.615850e-47
Msa0490820	Msa0571920	0.804732	1.876006e-49	-8.615850e-47
Msa0490820	Msa0576940	0.812441	4.233367e-51	-8.615850e-47
Msa0490820	Msa0581070	0.817481	3.224947e-52	-8.615850e-47
Msa0490820	Msa0590940	0.900113	1.013261e-77	-8.615850e-47
Msa0490820	Msa0593700	0.806029	1.003116e-49	-8.615850e-47
Msa0490820	Msa0603750	0.806490	8.020285e-50	-8.615850e-47
Msa0490820	Msa0615580	0.823328	1.469703e-53	-8.615850e-47
Msa0490820	Msa0633570	0.814741	1.320374e-51	-8.615850e-47
Msa0490820	Msa0654870	0.807372	5.221366e-50	-8.615850e-47
Msa0490820	Msa0659990	0.814561	1.447360e-51	-8.615850e-47
Msa0490820	Msa0666230	0.822575	2.201752e-53	-8.615850e-47
Msa0490820	Msa0683780	0.864842	9.091599e-65	-8.615850e-47
Msa0490820	Msa0687630	0.807375	5.211861e-50	-8.615850e-47
Msa0490820	Msa0699190	0.832915	7.196455e-56	-8.615850e-47
Msa0490820	Msa0704660	0.802665	5.037390e-49	-8.615850e-47
Msa0490820	Msa0705000	0.807764	4.309028e-50	-8.615850e-47
Msa0490820	Msa0705040	0.823580	1.283319e-53	-8.615850e-47
Msa0490820	Msa0729200	0.826377	2.805054e-54	-8.615850e-47
Msa0490820	Msa0769590	0.828919	6.879625e-55	-8.615850e-47
Msa0490820	Msa0785130	0.823230	1.549434e-53	-8.615850e-47
Msa0490820	Msa0803020	-0.836413	9.498219e-57	-8.615850e-47
Msa0490820	Msa0806880	0.828493	8.719625e-55	-8.615850e-47
Msa0490820	Msa0817540	0.806880	6.634262e-50	-8.615850e-47
Msa0490820	Msa0906000	0.802325	5.918054e-49	-8.615850e-47
Msa0490820	Msa0943170	0.831508	1.604185e-55	-8.615850e-47
Msa0490820	Msa0945480	0.820514	6.588533e-53	-8.615850e-47
Msa0490820	Msa0963020	0.815643	8.320831e-52	-8.615850e-47
Msa0490820	Msa0994290	0.805246	1.464188e-49	-8.615850e-47
Msa0490820	Msa1019240	0.843081	1.744129e-58	-8.615850e-47
Msa0490820	Msa1019260	0.840816	6.924322e-58	-8.615850e-47
Msa0490820	Msa1025940	0.802521	5.392704e-49	-8.615850e-47
Msa0490820	Msa1083880	0.816724	4.771440e-52	-8.615850e-47
Msa0490820	Msa1104210	0.827388	1.607895e-54	-8.615850e-47
Msa0490820	Msa1125500	0.852019	6.074124e-61	-8.615850e-47
Msa0490820	Msa1125580	0.804394	2.206184e-49	-8.615850e-47
Msa0490820	Msa1126510	0.817351	3.449695e-52	-8.615850e-47
Msa0490820	Msa1131560	0.803551	3.302173e-49	-8.615850e-47
Msa0490820	Msa1165780	0.816086	6.629384e-52	-8.615850e-47
Msa0490820	Msa1166860	0.820106	8.174616e-53	-8.615850e-47
Msa0490820	Msa1166870	0.856009	4.298594e-62	-8.615850e-47
Msa0490820	Msa1179950	0.815360	9.621417e-52	-8.615850e-47
Msa0490820	Msa1179980	0.827016	1.973860e-54	-8.615850e-47
Msa0490820	Msa1184370	0.834667	2.625018e-56	-8.615850e-47
Msa0490820	Msa1185440	0.817798	2.735384e-52	-8.615850e-47
Msa0490820	Msa1201830	0.803417	3.521412e-49	-8.615850e-47
Msa0490820	Msa1208020	0.802700	4.954578e-49	-8.615850e-47
Msa0490820	Msa1211770	0.827939	1.185958e-54	-8.615850e-47
Msa0490820	Msa1227690	0.855083	8.002331e-62	-8.615850e-47
Msa0490820	Msa1270620	0.819376	1.200083e-52	-8.615850e-47
Msa0490820	Msa1270690	0.821796	3.336623e-53	-8.615850e-47
Msa0490820	Msa1294840	0.827695	1.357590e-54	-8.615850e-47
Msa0490820	Msa1306990	0.819087	1.396014e-52	-8.615850e-47
Msa0490820	Msa1310690	0.811385	7.187348e-51	-8.615850e-47
Msa0490820	Msa1345450	0.838419	2.908408e-57	-8.615850e-47
Msa0490820	Msa1349570	0.820523	6.557903e-53	-8.615850e-47
Msa0490820	Msa1362790	0.817352	3.448667e-52	-8.615850e-47
Msa0490820	Msa1363330	0.803738	3.020812e-49	-8.615850e-47
Msa0490820	Msa1369190	0.836641	8.309880e-57	-8.615850e-47
Msa0490820	Msa1370860	0.827993	1.150898e-54	-8.615850e-47
Msa0490820	Msa1379760	0.812848	3.448982e-51	-8.615850e-47
Msa0490820	Msa1386600	0.802073	6.670078e-49	-8.615850e-47
Msa0490820	Msa1404190	0.804729	1.878279e-49	-8.615850e-47
Msa0490820	Msa1413500	0.819221	1.301676e-52	-8.615850e-47
Msa0490820	Msa1442850	0.826139	3.195480e-54	-8.615850e-47
Msa0490820	Msa1450280	0.880061	7.485448e-70	-8.615850e-47
Msa0490820	Msa1456050	0.807932	3.969746e-50	-8.615850e-47
Msa0490820	Msa1457790	0.813868	2.058521e-51	-8.615850e-47
Msa0490820	Msa1462860	0.825988	3.471569e-54	-8.615850e-47
Msa0490820	Msa1465080	0.803628	3.183201e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0490820	MtrunA17_Chr3g0081741	99.301	143	1	0	1	143	1	143	1.52e-105	297
Msa0490820	MtrunA17_Chr8g0353881	88.811	143	16	0	1	143	1	143	1.29e-97	277
Msa0490820	MtrunA17_Chr3g0081771	83.333	84	12	1	60	143	10	91	5.74e-44	139

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa0490820	AT5G61170.1	83.099	142	24	1	142	1	142	1.35e-90	259
Msa0490820	AT3G02080.1	81.119	143	27	1	143	1	143	1.41e-90	259
Msa0490820	AT5G15520.1	83.453	139	23	1	139	1	139	9.55e-89	254

Find 70 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCACAAAGCACAACTGAATT+AGG	0.152804	3_4:-12521489	None:intergenic
TGTGAAGACTGCAAGGTTTA+AGG	0.181111	3_4:+12522554	Msa0490820:CDS
GGTGCATTCCAGAGGATTTA+TGG	0.279212	3_4:+12522792	Msa0490820:CDS
AAGCAAATGCTAGTTGTAAC+TGG	0.290090	3_4:-12523544	None:intergenic
GATCCAGATCCAATAGATAT+TGG	0.308683	3_4:+12521412	None:intergenic
TTCCAGTGGCAGGAGGGATT+TGG	0.312675	3_4:+12523233	Msa0490820:CDS
CACAAAGCACAACTGAATTA+GGG	0.332745	3_4:-12521488	None:intergenic
TTCACAATATCTGTCCATTC+TGG	0.341460	3_4:-12522537	None:intergenic
AGGGATTTGGACCAAGTTGC+TGG	0.349640	3_4:+12523246	Msa0490820:CDS
CCTTGGTGTCCATCTCAATA+AGG	0.385015	3_4:-12522908	None:intergenic
TCCCCTCAAGTAGATCTTCC+TGG	0.406265	3_4:-12522757	None:intergenic
GACTGCAAGGTTTAAGGAGT+TGG	0.416477	3_4:+12522560	Msa0490820:CDS
ATCCAGATCCAATAGATATT+GGG	0.423043	3_4:+12521413	None:intergenic
GATCCAATAGATATTGGGTT+CGG	0.436809	3_4:+12521418	None:intergenic
GTCCAAATCCCTCCTGCCAC+TGG	0.442468	3_4:-12523235	None:intergenic
GGCTTCCACCATAAATCCTC+TGG	0.445267	3_4:-12522800	None:intergenic
ATCCAATAGATATTGGGTTC+GGG	0.448247	3_4:+12521419	None:intergenic
ATCTACTTGAGGGGAGGACT+CGG	0.467280	3_4:+12522765	Msa0490820:CDS
GTGGGCGACTGCCATTCCTC+TGG	0.472369	3_4:-12522821	None:intergenic
TCTGCTCATCTCAAAAGATC+TGG	0.481965	3_4:+12521620	Msa0490820:CDS
AACATTGCAAGACGGTTGAT+AGG	0.483949	3_4:-12523502	None:intergenic
GTGCCGCAGCTTCCATGGCC+AGG	0.485644	3_4:+12522739	Msa0490820:intron
TGCATATTATCAAGCATGAA+TGG	0.488755	3_4:+12523587	Msa0490820:three_prime_UTR
GCTCTGACGTAGTACCAGTC+AGG	0.489319	3_4:-12522594	None:intergenic
TTGTGCTTTGTGAGTAGAGA+GGG	0.492581	3_4:+12521499	Msa0490820:five_prime_UTR
TAGTACCAGTCAGGGTCATA+AGG	0.498306	3_4:-12522585	None:intergenic
ACAAAACTCAACACAGATCA+AGG	0.498569	3_4:-12523285	None:intergenic
CTGCTCTTGCAGAAATGTGG+TGG	0.512063	3_4:-12522840	None:intergenic
CAAGTAGATCTTCCTGGCCA+TGG	0.517027	3_4:-12522751	None:intergenic
TGCTCTTGCAGAAATGTGGT+GGG	0.520015	3_4:-12522839	None:intergenic
GGCCAGGAAGATCTACTTGA+GGG	0.520468	3_4:+12522755	Msa0490820:CDS
GGAAGATCACTTCCAGTGGC+AGG	0.522712	3_4:+12523223	Msa0490820:CDS
AACAGTCCTTGCGGTAGCCA+TGG	0.523894	3_4:-12521561	None:intergenic
TAACAATACGTCCAGCAACT+TGG	0.533492	3_4:-12523257	None:intergenic
TGGCTCCTTATGACCCTGAC+TGG	0.535373	3_4:+12522580	Msa0490820:CDS
TCTGAAATGTGATGCTGTGA+GGG	0.536205	3_4:-12521463	None:intergenic
GACTGGTACTACGTCAGAGC+TGG	0.543992	3_4:+12522597	Msa0490820:CDS
AACAGATGGAGCTTCCAGAA+TGG	0.551656	3_4:+12522523	Msa0490820:intron
TTGAAGAATGTGGCGAGCAA+TGG	0.555153	3_4:-12522868	None:intergenic
GAACATGAACCTTATTGAGA+TGG	0.561257	3_4:+12522899	Msa0490820:CDS
TTGAGGGGAGGACTCGGTGT+TGG	0.561727	3_4:+12522771	Msa0490820:CDS
CTGAAATGTGATGCTGTGAG+GGG	0.578144	3_4:-12521462	None:intergenic
CCGCTGCTCTTGCAGAAATG+TGG	0.586275	3_4:-12522843	None:intergenic
TTCTGAAATGTGATGCTGTG+AGG	0.587211	3_4:-12521464	None:intergenic
AGCAAATGCTAGTTGTAACT+GGG	0.588462	3_4:-12523543	None:intergenic
TTTGCTTATTAACAATCATG+TGG	0.598815	3_4:+12523560	Msa0490820:three_prime_UTR
TCGGTGTTGGTGCATTCCAG+AGG	0.603387	3_4:+12522784	Msa0490820:CDS
TATGGTGGAAGCCAGAGGAA+TGG	0.608896	3_4:+12522810	Msa0490820:CDS
AGCTCGAGCAATCAAAGCAG+CGG	0.609025	3_4:+12521533	Msa0490820:five_prime_UTR
AGATCACTTCCAGTGGCAGG+AGG	0.615298	3_4:+12523226	Msa0490820:CDS
CAGATATTGTGAAGACTGCA+AGG	0.617924	3_4:+12522547	Msa0490820:CDS
CCACATTTCTGCAAGAGCAG+CGG	0.620770	3_4:+12522843	Msa0490820:CDS
GTTGTGCTTTGTGAGTAGAG+AGG	0.621686	3_4:+12521498	Msa0490820:five_prime_UTR
TCAAAGCAGCGGCACAACCA+TGG	0.626097	3_4:+12521544	Msa0490820:exon
CTCTGACGTAGTACCAGTCA+GGG	0.627550	3_4:-12522593	None:intergenic
TCATCTCAAAAGATCTGGCA+AGG	0.635281	3_4:+12521625	Msa0490820:CDS
GCACAACCATGGCTACCGCA+AGG	0.635383	3_4:+12521555	Msa0490820:exon
GGATTTATGGTGGAAGCCAG+AGG	0.643091	3_4:+12522805	Msa0490820:CDS
TGGCCAGGAAGATCTACTTG+AGG	0.644765	3_4:+12522754	Msa0490820:CDS
GATCACTTCCAGTGGCAGGA+GGG	0.646734	3_4:+12523227	Msa0490820:CDS
CTTATTGAGATGGACACCAA+GGG	0.649426	3_4:+12522909	Msa0490820:CDS
GGCAGGAAGATCACTTCCAG+TGG	0.650796	3_4:+12523219	Msa0490820:CDS
AGGAAGATCTACTTGAGGGG+AGG	0.656289	3_4:+12522759	Msa0490820:CDS
CCTTATTGAGATGGACACCA+AGG	0.671459	3_4:+12522908	Msa0490820:CDS
GCATTCCAGAGGATTTATGG+TGG	0.673361	3_4:+12522795	Msa0490820:CDS
AACATCTTGAACAGTCCTTG+CGG	0.675305	3_4:-12521570	None:intergenic
TCTGCAACTGTTGAAGAATG+TGG	0.679137	3_4:-12522878	None:intergenic
GCCAGGAAGATCTACTTGAG+GGG	0.680202	3_4:+12522756	Msa0490820:CDS
GAAGATATAACATTGCAAGA+CGG	0.681959	3_4:-12523510	None:intergenic
TTATTGAGATGGACACCAAG+GGG	0.704884	3_4:+12522910	Msa0490820:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTTGTTAATTTAAACAA+GGG	-	chr3_4:12522659-12522678	None:intergenic	10.0%
!!!	TTTTTTTGTTAATTTAAACA+AGG	-	chr3_4:12522660-12522679	None:intergenic	10.0%
!!!	TTTTTTGTTAATTTAAACAA+GGG	-	chr3_4:12522659-12522678	None:intergenic	10.0%
!!!	TTTTTTTGTTAATTTAAACA+AGG	-	chr3_4:12522660-12522679	None:intergenic	10.0%
!!!	AAAACCAAAATGAAATTTTT+CGG	-	chr3_4:12521663-12521682	None:intergenic	15.0%
!!!	TTAATGTTATGTTTTATGTT+AGG	+	chr3_4:12521870-12521889	Msa0490820:intron	15.0%
!!!	ATCAAAAACATTTTTTTGTT+AGG	-	chr3_4:12521966-12521985	None:intergenic	15.0%
!!!	TTGTTTTTGTTAATCAAATT+AGG	+	chr3_4:12522167-12522186	Msa0490820:intron	15.0%
!!	TAATCTATGTAATTAGAATA+AGG	-	chr3_4:12522291-12522310	None:intergenic	15.0%
!!!	TTAACAAACAAGAATTTTAA+GGG	-	chr3_4:12523462-12523481	None:intergenic	15.0%
!!!	AAAACCAAAATGAAATTTTT+CGG	-	chr3_4:12521663-12521682	None:intergenic	15.0%
!!!	TTAATGTTATGTTTTATGTT+AGG	+	chr3_4:12521870-12521889	Msa0490820:intron	15.0%
!!!	ATCAAAAACATTTTTTTGTT+AGG	-	chr3_4:12521966-12521985	None:intergenic	15.0%
!!!	TTGTTTTTGTTAATCAAATT+AGG	+	chr3_4:12522167-12522186	Msa0490820:intron	15.0%
!!	TAATCTATGTAATTAGAATA+AGG	-	chr3_4:12522291-12522310	None:intergenic	15.0%
!!!	TTAACAAACAAGAATTTTAA+GGG	-	chr3_4:12523462-12523481	None:intergenic	15.0%
!!!	TTTTGGTTTTTTTTTTGAAG+AGG	+	chr3_4:12521711-12521730	Msa0490820:intron	20.0%
!!!	ATTTGTTTTGATTTGCTTAA+CGG	+	chr3_4:12521735-12521754	Msa0490820:intron	20.0%
!!!	TGTTTTTGATTTGATTTGAT+TGG	+	chr3_4:12521976-12521995	Msa0490820:intron	20.0%
!!!	CAAATTTTGAAAGTTCAAAA+GGG	-	chr3_4:12522259-12522278	None:intergenic	20.0%
!!!	ACAAATTTTGAAAGTTCAAA+AGG	-	chr3_4:12522260-12522279	None:intergenic	20.0%
!!	TTCTAATTACATAGATTACT+TGG	+	chr3_4:12522293-12522312	Msa0490820:intron	20.0%
!!	TCTAATTACATAGATTACTT+GGG	+	chr3_4:12522294-12522313	Msa0490820:intron	20.0%
!!	TTATAATGATACGAATGAAA+TGG	+	chr3_4:12522424-12522443	Msa0490820:intron	20.0%
!!	TTGTATAGTTCAAATTTAGT+TGG	+	chr3_4:12522455-12522474	Msa0490820:intron	20.0%
!!	TAACAAAAAAATAACTTTCG+AGG	+	chr3_4:12522669-12522688	Msa0490820:intron	20.0%
!!	AACAAAAAAATAACTTTCGA+GGG	+	chr3_4:12522670-12522689	Msa0490820:intron	20.0%
!!!	TAACTATTTGATTTACATAG+CGG	-	chr3_4:12523029-12523048	None:intergenic	20.0%
!!	AAAAACCAATGTTAAAAACA+TGG	-	chr3_4:12523187-12523206	None:intergenic	20.0%
!!!	ATTTTATTCACTGGAATTTT+TGG	+	chr3_4:12523429-12523448	Msa0490820:three_prime_UTR	20.0%
!!!	CTTAACAAACAAGAATTTTA+AGG	-	chr3_4:12523463-12523482	None:intergenic	20.0%
!!!	TTTTGGTTTTTTTTTTGAAG+AGG	+	chr3_4:12521711-12521730	Msa0490820:intron	20.0%
!!!	ATTTGTTTTGATTTGCTTAA+CGG	+	chr3_4:12521735-12521754	Msa0490820:intron	20.0%
!!!	TGTTTTTGATTTGATTTGAT+TGG	+	chr3_4:12521976-12521995	Msa0490820:intron	20.0%
!!!	CAAATTTTGAAAGTTCAAAA+GGG	-	chr3_4:12522259-12522278	None:intergenic	20.0%
!!!	ACAAATTTTGAAAGTTCAAA+AGG	-	chr3_4:12522260-12522279	None:intergenic	20.0%
!!	TTCTAATTACATAGATTACT+TGG	+	chr3_4:12522293-12522312	Msa0490820:intron	20.0%
!!	TCTAATTACATAGATTACTT+GGG	+	chr3_4:12522294-12522313	Msa0490820:intron	20.0%
!!	TTATAATGATACGAATGAAA+TGG	+	chr3_4:12522424-12522443	Msa0490820:intron	20.0%
!!	TTGTATAGTTCAAATTTAGT+TGG	+	chr3_4:12522455-12522474	Msa0490820:intron	20.0%
!!	TAACAAAAAAATAACTTTCG+AGG	+	chr3_4:12522669-12522688	Msa0490820:intron	20.0%
!!	AACAAAAAAATAACTTTCGA+GGG	+	chr3_4:12522670-12522689	Msa0490820:intron	20.0%
!!!	TAACTATTTGATTTACATAG+CGG	-	chr3_4:12523029-12523048	None:intergenic	20.0%
!!	AAAAACCAATGTTAAAAACA+TGG	-	chr3_4:12523187-12523206	None:intergenic	20.0%
!!!	ATTTTATTCACTGGAATTTT+TGG	+	chr3_4:12523429-12523448	Msa0490820:three_prime_UTR	20.0%
!!!	CTTAACAAACAAGAATTTTA+AGG	-	chr3_4:12523463-12523482	None:intergenic	20.0%
!!	TTCACCGAAAAATTTCATTT+TGG	+	chr3_4:12521656-12521675	Msa0490820:intron	25.0%
!!!	TTTGTTTTGATTTGCTTAAC+GGG	+	chr3_4:12521736-12521755	Msa0490820:intron	25.0%
!!	TTGTCGAATTAATCTGTTTT+AGG	+	chr3_4:12521770-12521789	Msa0490820:intron	25.0%
!!	GTTATGTTTTATGTTAGGTT+TGG	+	chr3_4:12521875-12521894	Msa0490820:intron	25.0%
!!!	GAACTTTCAAAATTTGTTGT+TGG	+	chr3_4:12522263-12522282	Msa0490820:intron	25.0%
!	CATCTGTTCATAACAAAATA+AGG	-	chr3_4:12522511-12522530	None:intergenic	25.0%
!!!	CTTATTTTGTTATGAACAGA+TGG	+	chr3_4:12522509-12522528	Msa0490820:intron	25.0%
!!!	GTGCTTTTATTTATAGTGAT+TGG	+	chr3_4:12523115-12523134	Msa0490820:intron	25.0%
!	TGTTAAAAACATGGTATGAA+GGG	-	chr3_4:12523178-12523197	None:intergenic	25.0%
!	ATGTTAAAAACATGGTATGA+AGG	-	chr3_4:12523179-12523198	None:intergenic	25.0%
!!!	TCATACCATGTTTTTAACAT+TGG	+	chr3_4:12523179-12523198	Msa0490820:intron	25.0%
!	TTTGCTTATTAACAATCATG+TGG	+	chr3_4:12523560-12523579	Msa0490820:three_prime_UTR	25.0%
!!	TTCACCGAAAAATTTCATTT+TGG	+	chr3_4:12521656-12521675	Msa0490820:intron	25.0%
!!!	TTTGTTTTGATTTGCTTAAC+GGG	+	chr3_4:12521736-12521755	Msa0490820:intron	25.0%
!!	TTGTCGAATTAATCTGTTTT+AGG	+	chr3_4:12521770-12521789	Msa0490820:intron	25.0%
!!	GTTATGTTTTATGTTAGGTT+TGG	+	chr3_4:12521875-12521894	Msa0490820:intron	25.0%
!!!	GAACTTTCAAAATTTGTTGT+TGG	+	chr3_4:12522263-12522282	Msa0490820:intron	25.0%
!	CATCTGTTCATAACAAAATA+AGG	-	chr3_4:12522511-12522530	None:intergenic	25.0%
!!!	CTTATTTTGTTATGAACAGA+TGG	+	chr3_4:12522509-12522528	Msa0490820:intron	25.0%
!!!	GTGCTTTTATTTATAGTGAT+TGG	+	chr3_4:12523115-12523134	Msa0490820:intron	25.0%
!	TGTTAAAAACATGGTATGAA+GGG	-	chr3_4:12523178-12523197	None:intergenic	25.0%
!	ATGTTAAAAACATGGTATGA+AGG	-	chr3_4:12523179-12523198	None:intergenic	25.0%
!!!	TCATACCATGTTTTTAACAT+TGG	+	chr3_4:12523179-12523198	Msa0490820:intron	25.0%
!	TTTGCTTATTAACAATCATG+TGG	+	chr3_4:12523560-12523579	Msa0490820:three_prime_UTR	25.0%
!!	GTGTATGATTCGATTTGTTT+TGG	+	chr3_4:12521694-12521713	Msa0490820:intron	30.0%
!	ACATTGCAATTTTCAACAAC+AGG	-	chr3_4:12522712-12522731	None:intergenic	30.0%
	AACTACTGCTAAACAAATGT+TGG	-	chr3_4:12523078-12523097	None:intergenic	30.0%
!!	TTGGTTTTTCTTTATCACAG+TGG	+	chr3_4:12523198-12523217	Msa0490820:intron	30.0%
!	TCTTGTCACATTTTATTCAC+TGG	+	chr3_4:12523420-12523439	Msa0490820:three_prime_UTR	30.0%
	GAAGATATAACATTGCAAGA+CGG	-	chr3_4:12523513-12523532	None:intergenic	30.0%
	TGCATATTATCAAGCATGAA+TGG	+	chr3_4:12523587-12523606	Msa0490820:three_prime_UTR	30.0%
!!	GTGTATGATTCGATTTGTTT+TGG	+	chr3_4:12521694-12521713	Msa0490820:intron	30.0%
!	ACATTGCAATTTTCAACAAC+AGG	-	chr3_4:12522712-12522731	None:intergenic	30.0%
	AACTACTGCTAAACAAATGT+TGG	-	chr3_4:12523078-12523097	None:intergenic	30.0%
!!	TTGGTTTTTCTTTATCACAG+TGG	+	chr3_4:12523198-12523217	Msa0490820:intron	30.0%
!	TCTTGTCACATTTTATTCAC+TGG	+	chr3_4:12523420-12523439	Msa0490820:three_prime_UTR	30.0%
	GAAGATATAACATTGCAAGA+CGG	-	chr3_4:12523513-12523532	None:intergenic	30.0%
	TGCATATTATCAAGCATGAA+TGG	+	chr3_4:12523587-12523606	Msa0490820:three_prime_UTR	30.0%
	CACAAAGCACAACTGAATTA+GGG	-	chr3_4:12521491-12521510	None:intergenic	35.0%
	TCACAAAGCACAACTGAATT+AGG	-	chr3_4:12521492-12521511	None:intergenic	35.0%
	TTACATAGATTACTTGGGCA+TGG	+	chr3_4:12522299-12522318	Msa0490820:intron	35.0%
	TTCACAATATCTGTCCATTC+TGG	-	chr3_4:12522540-12522559	None:intergenic	35.0%
!!	GTTTGATTTTGTGCATTTCC+TGG	+	chr3_4:12522632-12522651	Msa0490820:intron	35.0%
	GTTAATTTAAACAAGGGACC+AGG	-	chr3_4:12522653-12522672	None:intergenic	35.0%
	GAACATGAACCTTATTGAGA+TGG	+	chr3_4:12522899-12522918	Msa0490820:CDS	35.0%
	TACGGTTTACAATAGGGAAT+AGG	+	chr3_4:12522961-12522980	Msa0490820:intron	35.0%
	ACGGTTTACAATAGGGAATA+GGG	+	chr3_4:12522962-12522981	Msa0490820:intron	35.0%
	GCTAAACAAATGTTGGAATC+AGG	-	chr3_4:12523071-12523090	None:intergenic	35.0%
!	TTTTTCTTTATCACAGTGGC+AGG	+	chr3_4:12523202-12523221	Msa0490820:intron	35.0%
	ACAAAACTCAACACAGATCA+AGG	-	chr3_4:12523288-12523307	None:intergenic	35.0%
	AGCAAATGCTAGTTGTAACT+GGG	-	chr3_4:12523546-12523565	None:intergenic	35.0%
	AAGCAAATGCTAGTTGTAAC+TGG	-	chr3_4:12523547-12523566	None:intergenic	35.0%
	CACAAAGCACAACTGAATTA+GGG	-	chr3_4:12521491-12521510	None:intergenic	35.0%
	TCACAAAGCACAACTGAATT+AGG	-	chr3_4:12521492-12521511	None:intergenic	35.0%
	TTACATAGATTACTTGGGCA+TGG	+	chr3_4:12522299-12522318	Msa0490820:intron	35.0%
	TTCACAATATCTGTCCATTC+TGG	-	chr3_4:12522540-12522559	None:intergenic	35.0%
!!	GTTTGATTTTGTGCATTTCC+TGG	+	chr3_4:12522632-12522651	Msa0490820:intron	35.0%
	GTTAATTTAAACAAGGGACC+AGG	-	chr3_4:12522653-12522672	None:intergenic	35.0%
	GAACATGAACCTTATTGAGA+TGG	+	chr3_4:12522899-12522918	Msa0490820:CDS	35.0%
	TACGGTTTACAATAGGGAAT+AGG	+	chr3_4:12522961-12522980	Msa0490820:intron	35.0%
	ACGGTTTACAATAGGGAATA+GGG	+	chr3_4:12522962-12522981	Msa0490820:intron	35.0%
	GCTAAACAAATGTTGGAATC+AGG	-	chr3_4:12523071-12523090	None:intergenic	35.0%
!	TTTTTCTTTATCACAGTGGC+AGG	+	chr3_4:12523202-12523221	Msa0490820:intron	35.0%
	ACAAAACTCAACACAGATCA+AGG	-	chr3_4:12523288-12523307	None:intergenic	35.0%
	AGCAAATGCTAGTTGTAACT+GGG	-	chr3_4:12523546-12523565	None:intergenic	35.0%
	AAGCAAATGCTAGTTGTAAC+TGG	-	chr3_4:12523547-12523566	None:intergenic	35.0%
!	TCTGAAATGTGATGCTGTGA+GGG	-	chr3_4:12521466-12521485	None:intergenic	40.0%
!!	TTCTGAAATGTGATGCTGTG+AGG	-	chr3_4:12521467-12521486	None:intergenic	40.0%
	TTGTGCTTTGTGAGTAGAGA+GGG	+	chr3_4:12521499-12521518	Msa0490820:five_prime_UTR	40.0%
	AACATCTTGAACAGTCCTTG+CGG	-	chr3_4:12521573-12521592	None:intergenic	40.0%
	TCTGCTCATCTCAAAAGATC+TGG	+	chr3_4:12521620-12521639	Msa0490820:CDS	40.0%
	TCATCTCAAAAGATCTGGCA+AGG	+	chr3_4:12521625-12521644	Msa0490820:CDS	40.0%
	GTATTCAAGCTCTACTTCAC+TGG	+	chr3_4:12522390-12522409	Msa0490820:intron	40.0%
	CAGATATTGTGAAGACTGCA+AGG	+	chr3_4:12522547-12522566	Msa0490820:CDS	40.0%
	TGTGAAGACTGCAAGGTTTA+AGG	+	chr3_4:12522554-12522573	Msa0490820:CDS	40.0%
	TCTGCAACTGTTGAAGAATG+TGG	-	chr3_4:12522881-12522900	None:intergenic	40.0%
	CTTATTGAGATGGACACCAA+GGG	+	chr3_4:12522909-12522928	Msa0490820:CDS	40.0%
	TTATTGAGATGGACACCAAG+GGG	+	chr3_4:12522910-12522929	Msa0490820:CDS	40.0%
	GATAATGAGTTCTTACCCCT+TGG	-	chr3_4:12522928-12522947	None:intergenic	40.0%
!	TTATCCTTGTTAGCCTGCTA+CGG	+	chr3_4:12522943-12522962	Msa0490820:intron	40.0%
	TAACAATACGTCCAGCAACT+TGG	-	chr3_4:12523260-12523279	None:intergenic	40.0%
	AACATTGCAAGACGGTTGAT+AGG	-	chr3_4:12523505-12523524	None:intergenic	40.0%
!	TCTGAAATGTGATGCTGTGA+GGG	-	chr3_4:12521466-12521485	None:intergenic	40.0%
!!	TTCTGAAATGTGATGCTGTG+AGG	-	chr3_4:12521467-12521486	None:intergenic	40.0%
	TTGTGCTTTGTGAGTAGAGA+GGG	+	chr3_4:12521499-12521518	Msa0490820:five_prime_UTR	40.0%
	AACATCTTGAACAGTCCTTG+CGG	-	chr3_4:12521573-12521592	None:intergenic	40.0%
	TCTGCTCATCTCAAAAGATC+TGG	+	chr3_4:12521620-12521639	Msa0490820:CDS	40.0%
	TCATCTCAAAAGATCTGGCA+AGG	+	chr3_4:12521625-12521644	Msa0490820:CDS	40.0%
	GTATTCAAGCTCTACTTCAC+TGG	+	chr3_4:12522390-12522409	Msa0490820:intron	40.0%
	CAGATATTGTGAAGACTGCA+AGG	+	chr3_4:12522547-12522566	Msa0490820:CDS	40.0%
	TGTGAAGACTGCAAGGTTTA+AGG	+	chr3_4:12522554-12522573	Msa0490820:CDS	40.0%
	TCTGCAACTGTTGAAGAATG+TGG	-	chr3_4:12522881-12522900	None:intergenic	40.0%
	CTTATTGAGATGGACACCAA+GGG	+	chr3_4:12522909-12522928	Msa0490820:CDS	40.0%
	TTATTGAGATGGACACCAAG+GGG	+	chr3_4:12522910-12522929	Msa0490820:CDS	40.0%
	GATAATGAGTTCTTACCCCT+TGG	-	chr3_4:12522928-12522947	None:intergenic	40.0%
!	TTATCCTTGTTAGCCTGCTA+CGG	+	chr3_4:12522943-12522962	Msa0490820:intron	40.0%
	TAACAATACGTCCAGCAACT+TGG	-	chr3_4:12523260-12523279	None:intergenic	40.0%
	AACATTGCAAGACGGTTGAT+AGG	-	chr3_4:12523505-12523524	None:intergenic	40.0%
	CTGAAATGTGATGCTGTGAG+GGG	-	chr3_4:12521465-12521484	None:intergenic	45.0%
	GTTGTGCTTTGTGAGTAGAG+AGG	+	chr3_4:12521498-12521517	Msa0490820:five_prime_UTR	45.0%
	CATGGTTTCATCTCACGTGT+TGG	+	chr3_4:12522317-12522336	Msa0490820:intron	45.0%
	AACAGATGGAGCTTCCAGAA+TGG	+	chr3_4:12522523-12522542	Msa0490820:intron	45.0%
	GACTGCAAGGTTTAAGGAGT+TGG	+	chr3_4:12522560-12522579	Msa0490820:CDS	45.0%
	TAGTACCAGTCAGGGTCATA+AGG	-	chr3_4:12522588-12522607	None:intergenic	45.0%
	GGTGCATTCCAGAGGATTTA+TGG	+	chr3_4:12522792-12522811	Msa0490820:CDS	45.0%
	GCATTCCAGAGGATTTATGG+TGG	+	chr3_4:12522795-12522814	Msa0490820:CDS	45.0%
	TGCTCTTGCAGAAATGTGGT+GGG	-	chr3_4:12522842-12522861	None:intergenic	45.0%
	TTGAAGAATGTGGCGAGCAA+TGG	-	chr3_4:12522871-12522890	None:intergenic	45.0%
!!	CCTTGGTGTCCATCTCAATA+AGG	-	chr3_4:12522911-12522930	None:intergenic	45.0%
	CCTTATTGAGATGGACACCA+AGG	+	chr3_4:12522908-12522927	Msa0490820:CDS	45.0%
	TAAACCGTAGCAGGCTAACA+AGG	-	chr3_4:12522950-12522969	None:intergenic	45.0%
	AGCCTGCTACGGTTTACAAT+AGG	+	chr3_4:12522954-12522973	Msa0490820:intron	45.0%
	GCCTGCTACGGTTTACAATA+GGG	+	chr3_4:12522955-12522974	Msa0490820:intron	45.0%
	TCCCTATTGTAAACCGTAGC+AGG	-	chr3_4:12522959-12522978	None:intergenic	45.0%
	CTGAAATGTGATGCTGTGAG+GGG	-	chr3_4:12521465-12521484	None:intergenic	45.0%
	GTTGTGCTTTGTGAGTAGAG+AGG	+	chr3_4:12521498-12521517	Msa0490820:five_prime_UTR	45.0%
	CATGGTTTCATCTCACGTGT+TGG	+	chr3_4:12522317-12522336	Msa0490820:intron	45.0%
	AACAGATGGAGCTTCCAGAA+TGG	+	chr3_4:12522523-12522542	Msa0490820:intron	45.0%
	GACTGCAAGGTTTAAGGAGT+TGG	+	chr3_4:12522560-12522579	Msa0490820:CDS	45.0%
	TAGTACCAGTCAGGGTCATA+AGG	-	chr3_4:12522588-12522607	None:intergenic	45.0%
	GGTGCATTCCAGAGGATTTA+TGG	+	chr3_4:12522792-12522811	Msa0490820:CDS	45.0%
	GCATTCCAGAGGATTTATGG+TGG	+	chr3_4:12522795-12522814	Msa0490820:CDS	45.0%
	TGCTCTTGCAGAAATGTGGT+GGG	-	chr3_4:12522842-12522861	None:intergenic	45.0%
	TTGAAGAATGTGGCGAGCAA+TGG	-	chr3_4:12522871-12522890	None:intergenic	45.0%
!!	CCTTGGTGTCCATCTCAATA+AGG	-	chr3_4:12522911-12522930	None:intergenic	45.0%
	CCTTATTGAGATGGACACCA+AGG	+	chr3_4:12522908-12522927	Msa0490820:CDS	45.0%
	TAAACCGTAGCAGGCTAACA+AGG	-	chr3_4:12522950-12522969	None:intergenic	45.0%
	AGCCTGCTACGGTTTACAAT+AGG	+	chr3_4:12522954-12522973	Msa0490820:intron	45.0%
	GCCTGCTACGGTTTACAATA+GGG	+	chr3_4:12522955-12522974	Msa0490820:intron	45.0%
	TCCCTATTGTAAACCGTAGC+AGG	-	chr3_4:12522959-12522978	None:intergenic	45.0%
	AGCTCGAGCAATCAAAGCAG+CGG	+	chr3_4:12521533-12521552	Msa0490820:five_prime_UTR	50.0%
	CTCTGACGTAGTACCAGTCA+GGG	-	chr3_4:12522596-12522615	None:intergenic	50.0%
!	TTTTTGTGCCGCAGCTTCCA+TGG	+	chr3_4:12522734-12522753	Msa0490820:intron	50.0%
	CAAGTAGATCTTCCTGGCCA+TGG	-	chr3_4:12522754-12522773	None:intergenic	50.0%
	TGGCCAGGAAGATCTACTTG+AGG	+	chr3_4:12522754-12522773	Msa0490820:CDS	50.0%
	GGCCAGGAAGATCTACTTGA+GGG	+	chr3_4:12522755-12522774	Msa0490820:CDS	50.0%
	GCCAGGAAGATCTACTTGAG+GGG	+	chr3_4:12522756-12522775	Msa0490820:CDS	50.0%
	TCCCCTCAAGTAGATCTTCC+TGG	-	chr3_4:12522760-12522779	None:intergenic	50.0%
	AGGAAGATCTACTTGAGGGG+AGG	+	chr3_4:12522759-12522778	Msa0490820:CDS	50.0%
	ATCTACTTGAGGGGAGGACT+CGG	+	chr3_4:12522765-12522784	Msa0490820:CDS	50.0%
	GGCTTCCACCATAAATCCTC+TGG	-	chr3_4:12522803-12522822	None:intergenic	50.0%
!	GGATTTATGGTGGAAGCCAG+AGG	+	chr3_4:12522805-12522824	Msa0490820:CDS	50.0%
!	TATGGTGGAAGCCAGAGGAA+TGG	+	chr3_4:12522810-12522829	Msa0490820:CDS	50.0%
	CTGCTCTTGCAGAAATGTGG+TGG	-	chr3_4:12522843-12522862	None:intergenic	50.0%
	CCACATTTCTGCAAGAGCAG+CGG	+	chr3_4:12522843-12522862	Msa0490820:CDS	50.0%
	AGGGATTTGGACCAAGTTGC+TGG	+	chr3_4:12523246-12523265	Msa0490820:CDS	50.0%
	AGCTCGAGCAATCAAAGCAG+CGG	+	chr3_4:12521533-12521552	Msa0490820:five_prime_UTR	50.0%
	CTCTGACGTAGTACCAGTCA+GGG	-	chr3_4:12522596-12522615	None:intergenic	50.0%
!	TTTTTGTGCCGCAGCTTCCA+TGG	+	chr3_4:12522734-12522753	Msa0490820:intron	50.0%
	CAAGTAGATCTTCCTGGCCA+TGG	-	chr3_4:12522754-12522773	None:intergenic	50.0%
	TGGCCAGGAAGATCTACTTG+AGG	+	chr3_4:12522754-12522773	Msa0490820:CDS	50.0%
	GGCCAGGAAGATCTACTTGA+GGG	+	chr3_4:12522755-12522774	Msa0490820:CDS	50.0%
	GCCAGGAAGATCTACTTGAG+GGG	+	chr3_4:12522756-12522775	Msa0490820:CDS	50.0%
	TCCCCTCAAGTAGATCTTCC+TGG	-	chr3_4:12522760-12522779	None:intergenic	50.0%
	AGGAAGATCTACTTGAGGGG+AGG	+	chr3_4:12522759-12522778	Msa0490820:CDS	50.0%
	ATCTACTTGAGGGGAGGACT+CGG	+	chr3_4:12522765-12522784	Msa0490820:CDS	50.0%
	GGCTTCCACCATAAATCCTC+TGG	-	chr3_4:12522803-12522822	None:intergenic	50.0%
!	GGATTTATGGTGGAAGCCAG+AGG	+	chr3_4:12522805-12522824	Msa0490820:CDS	50.0%
!	TATGGTGGAAGCCAGAGGAA+TGG	+	chr3_4:12522810-12522829	Msa0490820:CDS	50.0%
	CTGCTCTTGCAGAAATGTGG+TGG	-	chr3_4:12522843-12522862	None:intergenic	50.0%
	CCACATTTCTGCAAGAGCAG+CGG	+	chr3_4:12522843-12522862	Msa0490820:CDS	50.0%
	AGGGATTTGGACCAAGTTGC+TGG	+	chr3_4:12523246-12523265	Msa0490820:CDS	50.0%
	TCAAAGCAGCGGCACAACCA+TGG	+	chr3_4:12521544-12521563	Msa0490820:exon	55.0%
	AACAGTCCTTGCGGTAGCCA+TGG	-	chr3_4:12521564-12521583	None:intergenic	55.0%
	TGGCTCCTTATGACCCTGAC+TGG	+	chr3_4:12522580-12522599	Msa0490820:CDS	55.0%
	GCTCTGACGTAGTACCAGTC+AGG	-	chr3_4:12522597-12522616	None:intergenic	55.0%
	GACTGGTACTACGTCAGAGC+TGG	+	chr3_4:12522597-12522616	Msa0490820:CDS	55.0%
!!	TCGGTGTTGGTGCATTCCAG+AGG	+	chr3_4:12522784-12522803	Msa0490820:CDS	55.0%
	CCGCTGCTCTTGCAGAAATG+TGG	-	chr3_4:12522846-12522865	None:intergenic	55.0%
	GGCAGGAAGATCACTTCCAG+TGG	+	chr3_4:12523219-12523238	Msa0490820:CDS	55.0%
	GGAAGATCACTTCCAGTGGC+AGG	+	chr3_4:12523223-12523242	Msa0490820:CDS	55.0%
	AGATCACTTCCAGTGGCAGG+AGG	+	chr3_4:12523226-12523245	Msa0490820:CDS	55.0%
	GATCACTTCCAGTGGCAGGA+GGG	+	chr3_4:12523227-12523246	Msa0490820:CDS	55.0%
	TTCCAGTGGCAGGAGGGATT+TGG	+	chr3_4:12523233-12523252	Msa0490820:CDS	55.0%
	TCAAAGCAGCGGCACAACCA+TGG	+	chr3_4:12521544-12521563	Msa0490820:exon	55.0%
	AACAGTCCTTGCGGTAGCCA+TGG	-	chr3_4:12521564-12521583	None:intergenic	55.0%
	TGGCTCCTTATGACCCTGAC+TGG	+	chr3_4:12522580-12522599	Msa0490820:CDS	55.0%
	GCTCTGACGTAGTACCAGTC+AGG	-	chr3_4:12522597-12522616	None:intergenic	55.0%
	GACTGGTACTACGTCAGAGC+TGG	+	chr3_4:12522597-12522616	Msa0490820:CDS	55.0%
!!	TCGGTGTTGGTGCATTCCAG+AGG	+	chr3_4:12522784-12522803	Msa0490820:CDS	55.0%
	CCGCTGCTCTTGCAGAAATG+TGG	-	chr3_4:12522846-12522865	None:intergenic	55.0%
	GGCAGGAAGATCACTTCCAG+TGG	+	chr3_4:12523219-12523238	Msa0490820:CDS	55.0%
	GGAAGATCACTTCCAGTGGC+AGG	+	chr3_4:12523223-12523242	Msa0490820:CDS	55.0%
	AGATCACTTCCAGTGGCAGG+AGG	+	chr3_4:12523226-12523245	Msa0490820:CDS	55.0%
	GATCACTTCCAGTGGCAGGA+GGG	+	chr3_4:12523227-12523246	Msa0490820:CDS	55.0%
	TTCCAGTGGCAGGAGGGATT+TGG	+	chr3_4:12523233-12523252	Msa0490820:CDS	55.0%
	GCACAACCATGGCTACCGCA+AGG	+	chr3_4:12521555-12521574	Msa0490820:exon	60.0%
	CTTCCTGGCCATGGAAGCTG+CGG	-	chr3_4:12522745-12522764	None:intergenic	60.0%
!!	TTGAGGGGAGGACTCGGTGT+TGG	+	chr3_4:12522771-12522790	Msa0490820:CDS	60.0%
	GTCCAAATCCCTCCTGCCAC+TGG	-	chr3_4:12523238-12523257	None:intergenic	60.0%
	GCACAACCATGGCTACCGCA+AGG	+	chr3_4:12521555-12521574	Msa0490820:exon	60.0%
	CTTCCTGGCCATGGAAGCTG+CGG	-	chr3_4:12522745-12522764	None:intergenic	60.0%
!!	TTGAGGGGAGGACTCGGTGT+TGG	+	chr3_4:12522771-12522790	Msa0490820:CDS	60.0%
	GTCCAAATCCCTCCTGCCAC+TGG	-	chr3_4:12523238-12523257	None:intergenic	60.0%
	GTGGGCGACTGCCATTCCTC+TGG	-	chr3_4:12522824-12522843	None:intergenic	65.0%
	GTGGGCGACTGCCATTCCTC+TGG	-	chr3_4:12522824-12522843	None:intergenic	65.0%
	GTGCCGCAGCTTCCATGGCC+AGG	+	chr3_4:12522739-12522758	Msa0490820:intron	70.0%
	GTGCCGCAGCTTCCATGGCC+AGG	+	chr3_4:12522739-12522758	Msa0490820:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_4	gene	12521425	12523611	12521425	ID=Msa0490820;Name=Msa0490820
chr3_4	mRNA	12521425	12523611	12521425	ID=Msa0490820-mRNA-1;Parent=Msa0490820;Name=Msa0490820-mRNA-1;_AED=0.06;_eAED=0.06;_QI=138\|1\|1\|1\|1\|1\|4\|321\|143
chr3_4	exon	12521425	12521646	12521425	ID=Msa0490820-mRNA-1:exon:3862;Parent=Msa0490820-mRNA-1
chr3_4	exon	12522528	12522618	12522528	ID=Msa0490820-mRNA-1:exon:3863;Parent=Msa0490820-mRNA-1
chr3_4	exon	12522748	12522931	12522748	ID=Msa0490820-mRNA-1:exon:3864;Parent=Msa0490820-mRNA-1
chr3_4	exon	12523218	12523611	12523218	ID=Msa0490820-mRNA-1:exon:3865;Parent=Msa0490820-mRNA-1
chr3_4	five_prime_UTR	12521425	12521562	12521425	ID=Msa0490820-mRNA-1:five_prime_utr;Parent=Msa0490820-mRNA-1
chr3_4	CDS	12521563	12521646	12521563	ID=Msa0490820-mRNA-1:cds;Parent=Msa0490820-mRNA-1
chr3_4	CDS	12522528	12522618	12522528	ID=Msa0490820-mRNA-1:cds;Parent=Msa0490820-mRNA-1
chr3_4	CDS	12522748	12522931	12522748	ID=Msa0490820-mRNA-1:cds;Parent=Msa0490820-mRNA-1
chr3_4	CDS	12523218	12523290	12523218	ID=Msa0490820-mRNA-1:cds;Parent=Msa0490820-mRNA-1
chr3_4	three_prime_UTR	12523291	12523611	12523291	ID=Msa0490820-mRNA-1:three_prime_utr;Parent=Msa0490820-mRNA-1

Gene Sequence

>Msa0490820

ATGGCTACCGCAAGGACTGTTCAAGATGTTTCTTCACACGAGTTTGTCAAAGCTTACTCTGCTCATCTCAAAAGATCTGGCAAGATGGAGCTTCCAGAATGGACAGATATTGTGAAGACTGCAAGGTTTAAGGAGTTGGCTCCTTATGACCCTGACTGGTACTACGTCAGAGCTGCTTCCATGGCCAGGAAGATCTACTTGAGGGGAGGACTCGGTGTTGGTGCATTCCAGAGGATTTATGGTGGAAGCCAGAGGAATGGCAGTCGCCCACCACATTTCTGCAAGAGCAGCGGTTCCATTGCTCGCCACATTCTTCAACAGTTGCAGAACATGAACCTTATTGAGATGGACACCAAGGGTGGCAGGAAGATCACTTCCAGTGGCAGGAGGGATTTGGACCAAGTTGCTGGACGTATTGTTATTGCACCTTGA

Protein sequence

>Msa0490820

MATARTVQDVSSHEFVKAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNLIEMDTKGGRKITSSGRRDLDQVAGRIVIAP*