AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0418210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0418210 MtrunA17_Chr3g0115801 73.474 426 31 11 1 364 1 406 1.08e-175 494
Msa0418210 MtrunA17_Chr8g0382201 71.020 245 44 1 147 364 241 485 3.58e-111 333
Msa0418210 MtrunA17_Chr1g0149111 37.555 229 124 5 148 361 186 410 3.20e-39 144
Msa0418210 MtrunA17_Chr1g0149111 33.333 186 104 6 190 362 135 313 1.09e-19 89.7
Msa0418210 MtrunA17_Chr3g0137941 38.053 226 127 4 148 361 169 393 4.17e-39 143
Msa0418210 MtrunA17_Chr3g0137941 33.520 179 99 5 193 358 121 292 1.03e-19 89.7
Msa0418210 MtrunA17_Chr4g0063561 37.778 225 128 4 148 361 171 394 1.35e-37 139
Msa0418210 MtrunA17_Chr4g0063561 31.551 187 107 6 190 362 119 298 1.01e-17 84.0
Msa0418210 MtrunA17_Chr7g0242311 37.778 225 120 8 147 361 142 356 4.83e-34 129
Msa0418210 MtrunA17_Chr4g0006851 37.838 222 118 8 147 358 144 355 5.50e-32 124
Msa0418210 MtrunA17_Chr4g0006851 29.775 178 110 3 194 358 89 264 3.38e-11 63.9
Msa0418210 MtrunA17_Chr8g0385571 35.294 238 129 7 147 364 273 505 2.99e-31 123
Msa0418210 MtrunA17_Chr8g0385571 30.435 184 107 6 194 362 227 404 2.29e-14 74.3
Msa0418210 MtrunA17_Chr7g0240341 31.513 238 135 6 147 361 82 314 1.09e-29 116
Msa0418210 MtrunA17_Chr7g0252401 31.646 237 136 6 147 364 253 482 2.43e-29 118
Msa0418210 MtrunA17_Chr7g0252401 30.939 181 110 5 191 358 204 382 4.93e-15 76.3
Msa0418210 MtrunA17_Chr3g0131501 32.203 236 141 7 146 364 250 483 3.19e-28 115
Msa0418210 MtrunA17_Chr3g0131501 29.891 184 108 6 194 362 205 382 7.89e-14 72.4
Msa0418210 MtrunA17_Chr6g0488081 29.876 241 145 5 147 363 68 308 2.48e-25 104
Msa0418210 MtrunA17_Chr6g0488081 26.562 192 114 4 192 358 17 206 2.65e-13 70.1
Msa0418210 MtrunA17_Chr5g0436041 33.051 236 135 7 147 361 88 321 7.05e-25 103
Msa0418210 MtrunA17_Chr5g0396801 29.961 257 138 6 147 364 88 341 4.62e-24 101
Msa0418210 MtrunA17_Chr5g0396801 26.882 186 117 4 192 358 36 221 2.17e-12 67.4
Msa0418210 MtrunA17_Chr8g0347451 29.688 256 142 6 147 364 101 356 5.93e-24 101
Msa0418210 MtrunA17_Chr8g0347451 27.807 187 116 3 194 361 51 237 2.59e-14 73.6
Msa0418210 MtrunA17_Chr4g0067231 26.860 242 143 6 147 355 79 319 6.73e-23 97.8
Msa0418210 MtrunA17_Chr4g0067231 24.757 206 122 4 186 358 2 207 8.36e-15 74.7
Msa0418210 MtrunA17_Chr3g0135861 27.642 246 147 4 149 363 86 331 8.66e-22 95.1
Msa0418210 MtrunA17_Chr3g0135861 28.643 199 108 5 192 359 33 228 3.82e-13 69.7
Msa0418210 MtrunA17_Chr2g0296061 26.721 247 139 8 147 356 78 319 1.95e-21 93.6
Msa0418210 MtrunA17_Chr2g0296061 26.667 150 87 3 138 264 165 314 4.07e-13 69.7
Msa0418210 MtrunA17_Chr2g0296061 24.155 207 122 5 185 358 2 206 4.38e-13 69.3
Msa0418210 MtrunA17_Chr4g0000261 24.390 246 155 5 148 364 113 356 1.79e-18 85.5
Msa0418210 MtrunA17_Chr4g0000261 27.979 193 108 5 193 358 65 253 6.42e-12 66.2
Msa0418210 MtrunA17_Chr3g0135801 27.826 230 145 6 150 360 94 321 2.33e-18 84.7
Msa0418210 MtrunA17_Chr6g0488341 26.840 231 144 5 147 363 14 233 5.35e-17 79.7
Msa0418210 MtrunA17_Chr8g0393031 27.313 227 134 8 147 349 74 293 5.60e-17 80.9
Msa0418210 MtrunA17_Chr8g0386871 27.004 237 158 5 140 364 357 590 9.70e-17 81.6
Msa0418210 MtrunA17_Chr8g0386871 27.551 196 127 5 178 361 299 491 2.68e-12 68.2
Msa0418210 MtrunA17_Chr5g0411411 27.778 234 147 7 149 361 65 297 1.26e-16 79.3
Msa0418210 MtrunA17_Chr6g0463041 26.556 241 129 5 171 363 2 242 1.28e-15 75.9
Msa0418210 MtrunA17_Chr8g0372531 26.033 242 153 8 147 363 67 307 1.43e-13 70.9
Msa0418210 MtrunA17_Chr2g0328891 27.928 222 131 10 151 349 126 341 1.95e-13 70.9
Msa0418210 MtrunA17_Chr8g0366791 26.496 234 150 7 149 361 65 297 1.99e-13 70.1
Msa0418210 MtrunA17_Chr5g0423111 28.448 232 143 5 147 357 72 301 8.34e-13 68.9
Msa0418210 MtrunA17_Chr4g0028531 30.469 128 79 3 146 265 169 294 3.05e-12 66.6
Msa0418210 MtrunA17_Chr4g0040341 27.477 222 132 10 151 349 135 350 5.85e-12 66.2
Msa0418210 MtrunA17_Chr7g0269701 29.688 192 100 7 196 361 24 206 7.80e-12 65.5
Msa0418210 MtrunA17_Chr1g0195101 26.087 230 147 7 147 357 74 299 9.27e-12 65.5
Msa0418210 MtrunA17_Chr8g0383321 32.402 179 96 6 189 359 47 208 3.81e-11 63.5
Msa0418210 MtrunA17_Chr7g0275411 25.385 260 160 8 131 361 81 335 3.89e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0418210 AT5G64970.2 72.653 245 40 1 147 364 57 301 1.31e-117 343
Msa0418210 AT5G64970.1 72.653 245 40 1 147 364 181 425 1.30e-116 345
Msa0418210 AT5G64970.3 70.982 224 38 1 147 343 181 404 1.68e-101 306
Msa0418210 AT1G78180.1 67.568 259 56 2 133 364 161 418 3.51e-101 305
Msa0418210 AT4G32400.1 35.965 228 127 5 149 361 162 385 2.61e-35 133
Msa0418210 AT4G32400.1 33.516 182 101 6 190 358 110 284 3.93e-18 85.5
Msa0418210 AT2G37890.1 31.513 238 134 6 148 361 100 332 2.04e-31 121
Msa0418210 AT3G53940.1 33.051 236 135 5 147 361 127 360 2.09e-31 122
Msa0418210 AT3G55640.1 32.500 240 133 7 147 362 92 326 2.92e-31 121
Msa0418210 AT3G55640.4 32.500 240 133 7 147 362 92 326 2.92e-31 121
Msa0418210 AT5G51050.1 32.766 235 136 5 147 364 269 498 1.35e-30 122
Msa0418210 AT5G51050.1 31.461 178 107 5 194 358 223 398 3.72e-15 77.0
Msa0418210 AT3G51870.1 33.333 219 132 6 147 358 146 357 3.11e-30 119
Msa0418210 AT5G01500.1 34.685 222 131 6 147 361 174 388 3.39e-30 120
Msa0418210 AT5G01500.1 29.091 165 102 4 207 358 132 294 6.11e-11 63.9
Msa0418210 AT5G07320.1 32.456 228 131 6 146 358 254 473 1.76e-28 115
Msa0418210 AT5G07320.1 29.630 162 94 5 210 358 225 379 3.91e-11 64.7
Msa0418210 AT5G61810.2 31.092 238 133 6 146 364 110 335 1.22e-27 111
Msa0418210 AT5G61810.1 31.092 238 133 6 146 364 253 478 6.91e-27 111
Msa0418210 AT4G26180.1 30.204 245 142 7 146 363 69 311 1.13e-26 108
Msa0418210 AT4G26180.1 26.316 190 117 3 192 358 19 208 5.57e-12 66.6
Msa0418210 AT4G01100.3 31.128 257 137 7 147 364 42 297 9.15e-26 105
Msa0418210 AT4G01100.3 29.139 151 84 3 228 358 28 175 2.01e-11 64.7
Msa0418210 AT4G01100.1 31.128 257 137 7 147 364 92 347 3.30e-25 105
Msa0418210 AT4G01100.1 28.342 187 108 5 194 358 43 225 2.09e-13 70.9
Msa0418210 AT4G01100.2 30.292 274 131 8 147 364 92 361 2.75e-23 100
Msa0418210 AT1G14560.1 29.796 245 142 7 149 363 78 322 8.40e-21 92.4
Msa0418210 AT1G14560.1 29.032 155 86 3 228 358 62 216 1.52e-11 65.1
Msa0418210 AT3G20240.1 25.610 246 146 8 148 361 99 339 2.88e-20 91.3
Msa0418210 AT3G20240.1 27.919 197 103 6 193 358 51 239 2.19e-11 65.1
Msa0418210 AT5G48970.2 26.800 250 138 7 147 356 14 258 5.27e-20 89.0
Msa0418210 AT5G48970.2 26.761 142 92 2 229 358 1 142 2.33e-13 70.1
Msa0418210 AT4G26180.2 28.889 225 131 7 146 343 69 291 5.76e-20 89.4
Msa0418210 AT4G26180.2 26.316 190 117 3 192 358 19 208 4.93e-12 66.2
Msa0418210 AT5G48970.1 26.800 250 138 7 147 356 85 329 2.09e-19 88.6
Msa0418210 AT5G48970.1 27.368 190 111 5 196 358 24 213 2.33e-15 76.6
Msa0418210 AT5G56450.1 27.755 245 155 6 134 360 85 325 8.74e-19 86.7
Msa0418210 AT3G55640.2 37.398 123 70 3 147 262 92 214 4.16e-18 83.6
Msa0418210 AT3G55640.3 37.398 123 70 3 147 262 92 214 4.16e-18 83.6
Msa0418210 AT3G53940.2 35.294 136 81 2 147 275 127 262 1.73e-17 82.4
Msa0418210 AT3G21390.1 23.577 246 152 5 147 356 80 325 2.57e-17 82.4
Msa0418210 AT3G21390.1 25.532 188 115 4 196 358 21 208 3.32e-14 73.2
Msa0418210 AT3G21390.2 23.577 246 152 5 147 356 102 347 3.41e-17 82.4
Msa0418210 AT3G21390.2 26.047 215 128 6 175 358 16 230 1.17e-15 77.8
Msa0418210 AT5G46800.2 27.386 241 144 7 148 361 63 299 4.50e-16 78.2
Msa0418210 AT5G46800.3 27.386 241 144 7 148 361 63 299 4.50e-16 78.2
Msa0418210 AT5G46800.1 27.386 241 144 7 148 361 63 299 4.50e-16 78.2
Msa0418210 AT4G11440.1 29.289 239 148 6 143 363 370 605 5.53e-16 79.7
Msa0418210 AT4G11440.1 30.198 202 120 6 177 358 298 498 4.45e-13 70.9
Msa0418210 AT4G11440.2 29.289 239 148 6 143 363 370 605 5.53e-16 79.7
Msa0418210 AT4G11440.2 30.198 202 120 6 177 358 298 498 4.45e-13 70.9
Msa0418210 AT1G14560.2 30.939 181 104 5 149 308 78 258 3.89e-15 75.9
Msa0418210 AT1G14560.2 29.032 155 86 3 228 358 62 216 1.60e-11 65.1
Msa0418210 AT1G25380.1 30.263 228 139 6 148 357 77 302 8.12e-15 75.5
Msa0418210 AT1G25380.2 30.263 228 139 6 148 357 77 302 8.12e-15 75.5
Msa0418210 AT1G14560.3 29.730 222 126 7 172 363 3 224 1.80e-14 72.4
Msa0418210 AT5G17400.1 26.364 220 139 7 150 349 73 289 1.11e-13 71.2
Msa0418210 AT4G27940.1 25.911 247 144 7 150 361 165 407 9.29e-13 69.3
Msa0418210 AT4G28390.1 26.941 219 137 8 151 349 143 358 1.73e-12 68.6
Msa0418210 AT4G28390.2 26.941 219 137 8 151 349 143 358 1.73e-12 68.6
Msa0418210 AT5G26200.1 23.922 255 152 8 144 358 82 334 2.55e-12 67.8
Msa0418210 AT5G66380.1 26.721 247 148 9 144 362 60 301 4.21e-12 66.6
Msa0418210 AT4G39460.2 33.143 175 92 5 189 355 53 210 6.04e-12 66.2
Msa0418210 AT4G39460.1 33.143 175 92 5 189 355 53 210 6.04e-12 66.2
Msa0418210 AT4G39460.3 33.143 175 92 5 189 355 53 210 6.04e-12 66.2
Msa0418210 AT5G58970.1 22.511 231 158 4 147 361 73 298 2.26e-11 64.7
Msa0418210 AT1G07030.1 25.991 227 144 8 148 358 95 313 9.38e-11 62.8

Find 136 sgRNAs with CRISPR-Local

Find 489 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATTGGGGTTGAAGAAAA+TGG 0.186752 3_2:-65867072 None:intergenic
TGAGGTTGAAAACATAATTT+TGG 0.224614 3_2:+65873153 Msa0418210:three_prime_UTR
TAAATGTTGATTATTGAAAA+AGG 0.242548 3_2:+65873856 Msa0418210:three_prime_UTR
CCGGGATTGGGATTGGAATT+GGG 0.243336 3_2:-65867086 None:intergenic
ACTTATTCCCAGCTTATTAC+AGG 0.250299 3_2:+65869932 Msa0418210:CDS
CTCTACCAGCAGAAAGCTTT+TGG 0.255138 3_2:+65873225 Msa0418210:three_prime_UTR
CAAGCAAGTTCCTTTGCTTT+AGG 0.259883 3_2:+65873395 Msa0418210:three_prime_UTR
AAACCGTTTGTATTGCAAAA+TGG 0.262834 3_2:+65867287 Msa0418210:CDS
TTTATTGCTGGTGCTGCTGC+TGG 0.268529 3_2:+65868818 Msa0418210:CDS
TCCGGGATTGGGATTGGAAT+TGG 0.271265 3_2:-65867087 None:intergenic
AGCAATAAACCTCTCAAAAT+TGG 0.279930 3_2:-65868804 None:intergenic
GCGGAACCCTTCGCCGTTGC+CGG 0.294057 3_2:-65867202 None:intergenic
CAAAATGAACAGTTCTGTTT+GGG 0.294965 3_2:+65873642 Msa0418210:three_prime_UTR
GCCTTTGATCAGCTAGAGTT+GGG 0.301546 3_2:+65869732 Msa0418210:CDS
AGTAGCTTATCGGTTATTCT+TGG 0.304069 3_2:+65873431 Msa0418210:three_prime_UTR
CCATGCAACAATGTCCTTAC+TGG 0.315349 3_2:-65869756 None:intergenic
TTTGGGAGAGGGAAGTGTTT+AGG 0.315620 3_2:+65873659 Msa0418210:three_prime_UTR
CGAGAATATGATATTGTTGT+TGG 0.316307 3_2:+65873085 Msa0418210:three_prime_UTR
CATACTTTCTTGATTGTGAT+TGG 0.326037 3_2:+65873697 Msa0418210:three_prime_UTR
TCAAAATGAACAGTTCTGTT+TGG 0.331022 3_2:+65873641 Msa0418210:three_prime_UTR
CATATTCTCGCTTATAAATC+AGG 0.331698 3_2:-65873072 None:intergenic
GAAACTTTGGGTGGTGTAAT+TGG 0.334173 3_2:+65869516 Msa0418210:CDS
TCCGCCAGGTGCCACTATCT+TGG 0.344178 3_2:-65869493 None:intergenic
TAATTCTTAAAGTAGCTTAT+CGG 0.346289 3_2:+65873421 Msa0418210:three_prime_UTR
ATATTTGATGTTGGCCTTTG+AGG 0.350606 3_2:+65873135 Msa0418210:three_prime_UTR
CTTTCTTTATTGTGATATAG+TGG 0.362576 3_2:-65873617 None:intergenic
TTGTTGCATGGGGCTATTGC+TGG 0.364598 3_2:+65869768 Msa0418210:CDS
CGGTTCGCAGAATATTTAGA+AGG 0.372550 3_2:-65868700 None:intergenic
AGCAAAGGAACTTGCTTGCT+TGG 0.376039 3_2:-65873390 None:intergenic
GGTGTCAAACGGTGTCGTTT+TGG 0.376691 3_2:+65867334 Msa0418210:CDS
TGCCTCCTCACCACTTCAAA+TGG 0.377301 3_2:-65869816 None:intergenic
GGCACCTGGCGGAGAAACTT+TGG 0.384109 3_2:+65869503 Msa0418210:CDS
AAACAACTACTTAGATTCTC+TGG 0.390111 3_2:+65868767 Msa0418210:CDS
CTTCAGTTTGAATCATGTAT+TGG 0.396950 3_2:-65869545 None:intergenic
TGATGACTTTCTCAGAAGTA+TGG 0.399137 3_2:-65873185 None:intergenic
TTATTGCTGGTGCTGCTGCT+GGG 0.413053 3_2:+65868819 Msa0418210:CDS
CGGGATTGGGATTGGAATTG+GGG 0.414437 3_2:-65867085 None:intergenic
AGAGGGAAGTGTTTAGGAGT+TGG 0.418807 3_2:+65873665 Msa0418210:three_prime_UTR
TGCAACTAAGTTTATGTGCC+TGG 0.424513 3_2:-65873270 None:intergenic
GTAGCTTATCGGTTATTCTT+GGG 0.427051 3_2:+65873432 Msa0418210:three_prime_UTR
TGTTCTGGTTTCACATGGAA+TGG 0.430635 3_2:-65873743 None:intergenic
GTGATATAGTGGCATGTATT+CGG 0.431678 3_2:-65873606 None:intergenic
CCATAAAAGACTGCACTAGA+AGG 0.436323 3_2:-65869618 None:intergenic
GAATTGGGGTTGAAGAAAAT+GGG 0.436592 3_2:-65867071 None:intergenic
GCACCTGGCGGAGAAACTTT+GGG 0.438440 3_2:+65869504 Msa0418210:CDS
TGCCTTTGATCAGCTAGAGT+TGG 0.440567 3_2:+65869731 Msa0418210:CDS
TGAAGATTTGATTCCGATGA+AGG 0.444586 3_2:-65867176 None:intergenic
AGAGAAGGTTTAGTAAAATC+AGG 0.445578 3_2:+65873518 Msa0418210:three_prime_UTR
AATAAGAAAGAATTAAATAA+TGG 0.450455 3_2:+65873795 Msa0418210:three_prime_UTR
GGCATTTCAGCCCTCTATGC+AGG 0.455367 3_2:+65869909 Msa0418210:CDS
ATTTAATACCTGTAATAAGC+TGG 0.455738 3_2:-65869940 None:intergenic
TGGTGAAGATGTTTCTGATA+AGG 0.457238 3_2:+65867307 Msa0418210:CDS
GAGAAACTTATTCACATGTA+TGG 0.463218 3_2:+65873580 Msa0418210:three_prime_UTR
AAGAACTTAATTTAGTAGAC+TGG 0.463964 3_2:-65869854 None:intergenic
GGAAGATTAGTAGTACTATT+CGG 0.474460 3_2:-65867254 None:intergenic
ACGGAATAAGCATTAGAATC+AGG 0.474678 3_2:-65873304 None:intergenic
AGCTAGAGTTGGGGCCAGTA+AGG 0.478052 3_2:+65869742 Msa0418210:CDS
AATGAAACGAACAAAGGAAT+CGG 0.485907 3_2:-65867141 None:intergenic
AACAAAGGAATCGGGAATTG+AGG 0.486618 3_2:-65867132 None:intergenic
ATACATGTGAATAAGTTTCT+CGG 0.487150 3_2:-65873578 None:intergenic
CAGTAAGGACATTGTTGCAT+GGG 0.487811 3_2:+65869757 Msa0418210:CDS
GCATTGGCTATATTTGATGT+TGG 0.490417 3_2:+65873126 Msa0418210:three_prime_UTR
TTCACCGCCGGCAACGGCGA+AGG 0.493917 3_2:+65867195 Msa0418210:CDS
TGGTTTCACATGGAATGGAT+TGG 0.495916 3_2:-65873738 None:intergenic
ACCACTTGAAAGACTTAAGC+TGG 0.503394 3_2:+65868586 Msa0418210:CDS
CCAGTAAGGACATTGTTGCA+TGG 0.504976 3_2:+65869756 Msa0418210:CDS
CGGCGAAGGGTTCCGCCGGT+TGG 0.505530 3_2:+65867209 Msa0418210:CDS
GGGAATAAGTCCTGCATAGA+GGG 0.511616 3_2:-65869919 None:intergenic
CCCAATTCCAATCCCAATCC+CGG 0.512529 3_2:+65867086 Msa0418210:CDS
GAACAGTTCTGTTTGGGAGA+GGG 0.513381 3_2:+65873648 Msa0418210:three_prime_UTR
ATGAAACGAACAAAGGAATC+GGG 0.523024 3_2:-65867140 None:intergenic
GCCTCCTCACCACTTCAAAT+GGG 0.526042 3_2:-65869815 None:intergenic
AAGCTGGAATATATTGTTCG+TGG 0.526261 3_2:+65868602 Msa0418210:CDS
TTTCACATGGAATGGATTGG+AGG 0.528178 3_2:-65873735 None:intergenic
ATAGATTCGGACCAAGATAG+TGG 0.529404 3_2:+65869482 Msa0418210:intron
TATTGCTGGTGCTGCTGCTG+GGG 0.530538 3_2:+65868820 Msa0418210:CDS
TCCAATCCCAATCCCGGAGG+GGG 0.530641 3_2:+65867092 Msa0418210:CDS
ACTTAGATTCTCTGGAAATG+AGG 0.532399 3_2:+65868775 Msa0418210:CDS
TTTAATACCTGTAATAAGCT+GGG 0.532838 3_2:-65869939 None:intergenic
TTCGTTACGAATTCCTTCAT+CGG 0.533641 3_2:+65867163 Msa0418210:CDS
TCACCGCCGGCAACGGCGAA+GGG 0.533874 3_2:+65867196 Msa0418210:CDS
TAAGCATTAGAATCAGGATC+TGG 0.534571 3_2:-65873298 None:intergenic
GATAAGGAGTCGGTGTCAAA+CGG 0.535236 3_2:+65867323 Msa0418210:CDS
CACAAGTAGAGTATCCAGTT+AGG 0.536825 3_2:-65873466 None:intergenic
CAAATCTTCACCGCCGGCAA+CGG 0.539331 3_2:+65867189 Msa0418210:CDS
CCAGTCCAAAAGCTTTCTGC+TGG 0.539839 3_2:-65873230 None:intergenic
TGAACAGTTCTGTTTGGGAG+AGG 0.546393 3_2:+65873647 Msa0418210:three_prime_UTR
ACAAAGGAATCGGGAATTGA+GGG 0.548362 3_2:-65867131 None:intergenic
TGAAGTTTCATGAACAGAGA+AGG 0.548830 3_2:+65873503 Msa0418210:three_prime_UTR
ATATGATATTGTTGTTGGAA+TGG 0.554892 3_2:+65873090 Msa0418210:three_prime_UTR
GCAACTAAGTTTATGTGCCT+GGG 0.555908 3_2:-65873269 None:intergenic
GAACCCTTCGCCGTTGCCGG+CGG 0.564005 3_2:-65867199 None:intergenic
TGGGAATAAGTCCTGCATAG+AGG 0.566782 3_2:-65869920 None:intergenic
CCACCCAAAGTTTCTCCGCC+AGG 0.569871 3_2:-65869507 None:intergenic
AGAATTAAAACCTAAAGCAA+AGG 0.572591 3_2:-65873405 None:intergenic
GATTGTTCTCAAAGTAGAGT+AGG 0.575263 3_2:+65873001 Msa0418210:CDS
AGTACCATCACTTATAAGCA+TGG 0.578373 3_2:+65869593 Msa0418210:CDS
GCTACAACTCAAGGTTTGAG+AGG 0.579884 3_2:+65868662 Msa0418210:intron
CACATGGAATGGATTGGAGG+GGG 0.579940 3_2:-65873732 None:intergenic
CAATACATGATTCAAACTGA+AGG 0.582238 3_2:+65869546 Msa0418210:CDS
TGAAATGTTCTGGTTTCACA+TGG 0.583582 3_2:-65873748 None:intergenic
ATATTGTTCGTGGTGAGAAG+AGG 0.584013 3_2:+65868612 Msa0418210:CDS
TCCAGCTTAAGTCTTTCAAG+TGG 0.587617 3_2:-65868587 None:intergenic
GGAGCCATGCTTATAAGTGA+TGG 0.588027 3_2:-65869597 None:intergenic
TTCACATGGAATGGATTGGA+GGG 0.589925 3_2:-65873734 None:intergenic
CCCCAACTCTAGCTGATCAA+AGG 0.592324 3_2:-65869733 None:intergenic
TTTGTCAAAATTGTGGAACA+AGG 0.592430 3_2:+65869885 Msa0418210:CDS
ACCCATTTGAAGTGGTGAGG+AGG 0.596577 3_2:+65869814 Msa0418210:CDS
CGGAATCAAATCTTCACCGC+CGG 0.601286 3_2:+65867183 Msa0418210:CDS
TGCTACATACCCATTTGAAG+TGG 0.602917 3_2:+65869806 Msa0418210:CDS
CGGACCAAGATAGTGGCACC+TGG 0.603892 3_2:+65869489 Msa0418210:CDS
GCAACGGCGAAGGGTTCCGC+CGG 0.608025 3_2:+65867205 Msa0418210:CDS
ATTCCAATCCCAATCCCGGA+GGG 0.611126 3_2:+65867090 Msa0418210:CDS
TCACCACGTACAGTATCAAG+TGG 0.614556 3_2:-65868866 None:intergenic
AAATGGGAAGAGAATGTGAA+TGG 0.619907 3_2:-65867055 None:intergenic
CTAAAATTAACAGCTTTGAA+CGG 0.620147 3_2:-65868725 None:intergenic
TCACATGGAATGGATTGGAG+GGG 0.623869 3_2:-65873733 None:intergenic
GTCAAAATTGTGGAACAAGG+AGG 0.624778 3_2:+65869888 Msa0418210:CDS
CACGTACAGTATCAAGTGGA+AGG 0.625172 3_2:-65868862 None:intergenic
AAGTAACTAATTGATGCTGA+AGG 0.627682 3_2:-65872960 None:intergenic
TTCCAATCCCAATCCCGGAG+GGG 0.632210 3_2:+65867091 Msa0418210:CDS
AGATGTTTCTGATAAGGAGT+CGG 0.634841 3_2:+65867313 Msa0418210:CDS
CCTTTGATCAGCTAGAGTTG+GGG 0.635456 3_2:+65869733 Msa0418210:CDS
CTGAGAAAGTCATCACGGTA+CGG 0.643042 3_2:+65873193 Msa0418210:three_prime_UTR
CATACCCATTTGAAGTGGTG+AGG 0.653731 3_2:+65869811 Msa0418210:CDS
TAACGAAATGAAACGAACAA+AGG 0.654015 3_2:-65867147 None:intergenic
TACTTCTGAGAAAGTCATCA+CGG 0.659449 3_2:+65873188 Msa0418210:three_prime_UTR
TGGGAAGAGAATGTGAATGG+TGG 0.669990 3_2:-65867052 None:intergenic
AGTAAGGACATTGTTGCATG+GGG 0.675534 3_2:+65869758 Msa0418210:CDS
AAGGTTAGGGCTAGAGAACG+CGG 0.685827 3_2:+65867362 Msa0418210:CDS
ACTTTCTCAGAAGTATGGAG+TGG 0.686796 3_2:-65873180 None:intergenic
CCTGGCGGAGAAACTTTGGG+TGG 0.690555 3_2:+65869507 Msa0418210:CDS
ACCAAGATAGTGGCACCTGG+CGG 0.692494 3_2:+65869492 Msa0418210:CDS
AATTCCAATCCCAATCCCGG+AGG 0.698633 3_2:+65867089 Msa0418210:CDS
ATTAACAGCTTTGAACGGAG+CGG 0.702918 3_2:-65868720 None:intergenic
GCTTTACAGTCAATATACCC+AGG 0.713430 3_2:+65873252 Msa0418210:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATTTATTTTTCTTGTTT+TGG - chr3_2:65871537-65871556 None:intergenic 10.0%
!!! TTTTCACAAATAAATTTATT+TGG + chr3_2:65871601-65871620 Msa0418210:intron 10.0%
!! TTTCACAAATAAATTTATTT+GGG + chr3_2:65871602-65871621 Msa0418210:intron 10.0%
!!! GGTTTTTATAATAAATTTTT+TGG + chr3_2:65872606-65872625 Msa0418210:intron 10.0%
!! AATAAGAAAGAATTAAATAA+TGG + chr3_2:65873795-65873814 Msa0418210:three_prime_UTR 10.0%
!! CAATCAAATATATCATATTT+AGG - chr3_2:65867734-65867753 None:intergenic 15.0%
!!! TTATTTTTACTAGCTTATAA+TGG - chr3_2:65867828-65867847 None:intergenic 15.0%
!!! ATTAAGTTGTTTATCTAAAT+AGG + chr3_2:65868080-65868099 Msa0418210:intron 15.0%
!!! TTAAGTTGTTTATCTAAATA+GGG + chr3_2:65868081-65868100 Msa0418210:intron 15.0%
!! TCTAAATAAATAATCAAATG+TGG - chr3_2:65868514-65868533 None:intergenic 15.0%
!!! ATTGATCTTATGAAATTTTA+CGG - chr3_2:65870307-65870326 None:intergenic 15.0%
!! ATAAAATATGTTTGTGAAAT+TGG - chr3_2:65870569-65870588 None:intergenic 15.0%
!! TTCACAAATAAATTTATTTG+GGG + chr3_2:65871603-65871622 Msa0418210:intron 15.0%
!! AAAAATAAAAATAATGCTTG+TGG + chr3_2:65871875-65871894 Msa0418210:intron 15.0%
!!! AATAAATTTTTTGGAAATGT+TGG + chr3_2:65872615-65872634 Msa0418210:intron 15.0%
!! CAGAAAAATAAATAAATGAA+AGG - chr3_2:65872859-65872878 None:intergenic 15.0%
!!! TTGTTTTTAATATGGAAAAT+GGG + chr3_2:65873820-65873839 Msa0418210:three_prime_UTR 15.0%
!!! TAAATGTTGATTATTGAAAA+AGG + chr3_2:65873856-65873875 Msa0418210:three_prime_UTR 15.0%
!!! TAAATTGTTTGAAACTCTTA+CGG + chr3_2:65868130-65868149 Msa0418210:intron 20.0%
!! AAACACAGAAAAAATATAAG+TGG - chr3_2:65868279-65868298 None:intergenic 20.0%
!! ATTAAATCAAGATGATTACT+AGG - chr3_2:65868478-65868497 None:intergenic 20.0%
!! TAGTAATCATCTTGATTTAA+TGG + chr3_2:65868477-65868496 Msa0418210:intron 20.0%
!!! TCTTTAACTTTCTTTAGTTA+AGG + chr3_2:65869012-65869031 Msa0418210:intron 20.0%
!!! TAGGTATAATTTGTTTCATA+TGG + chr3_2:65869202-65869221 Msa0418210:intron 20.0%
!! AATAATCAATATGAACAGAA+TGG - chr3_2:65870072-65870091 None:intergenic 20.0%
!! AATGTGATTAATGTTCATAT+AGG + chr3_2:65870137-65870156 Msa0418210:intron 20.0%
!! ATGTGATTAATGTTCATATA+GGG + chr3_2:65870138-65870157 Msa0418210:intron 20.0%
!!! TTGATCTTATGAAATTTTAC+GGG - chr3_2:65870306-65870325 None:intergenic 20.0%
!! AATACATTTCCATGATAAAA+AGG - chr3_2:65870350-65870369 None:intergenic 20.0%
!!! TTTCAGTATCATAGTATTTT+GGG - chr3_2:65870630-65870649 None:intergenic 20.0%
!! TATGATACTGAAACTTAATT+AGG + chr3_2:65870637-65870656 Msa0418210:intron 20.0%
!!! TAATGCTAATCTTCATTTTA+AGG + chr3_2:65871066-65871085 Msa0418210:intron 20.0%
!! AGTGCAATTAAATTACTTAA+AGG - chr3_2:65871320-65871339 None:intergenic 20.0%
!! TTTAAGTAATTTAATTGCAC+TGG + chr3_2:65871319-65871338 Msa0418210:intron 20.0%
!!! AAATAGACCTTTTTCTTTAA+TGG - chr3_2:65871758-65871777 None:intergenic 20.0%
!!! AAAATGAGTATGATTTTACA+AGG + chr3_2:65872083-65872102 Msa0418210:intron 20.0%
!!! TTTTATATTCTTTTGCAAGA+AGG - chr3_2:65872788-65872807 None:intergenic 20.0%
!! TTGACACAATTAAATAACTT+AGG + chr3_2:65872815-65872834 Msa0418210:intron 20.0%
!! TAATTCTTAAAGTAGCTTAT+CGG + chr3_2:65873421-65873440 Msa0418210:three_prime_UTR 20.0%
!!! TAATGGAGTTGTTTTTAATA+TGG + chr3_2:65873812-65873831 Msa0418210:three_prime_UTR 20.0%
!!! GTTGTTTTTAATATGGAAAA+TGG + chr3_2:65873819-65873838 Msa0418210:three_prime_UTR 20.0%
!!! TGTTTTTAATATGGAAAATG+GGG + chr3_2:65873821-65873840 Msa0418210:three_prime_UTR 20.0%
! ATAATACTACTAAGCATCTT+TGG + chr3_2:65867393-65867412 Msa0418210:intron 25.0%
!!! TCATAAGTTGATTTCAACTT+AGG + chr3_2:65867533-65867552 Msa0418210:intron 25.0%
! CTTATTGAATTTGCAATGTT+TGG + chr3_2:65867626-65867645 Msa0418210:intron 25.0%
! GTTTATATATTTGCAGTGTT+TGG + chr3_2:65867669-65867688 Msa0418210:intron 25.0%
!! TGAACTAGCTTATAAATATG+AGG + chr3_2:65867705-65867724 Msa0418210:intron 25.0%
! TTGACTAAAAAAAACTCGTT+TGG - chr3_2:65867880-65867899 None:intergenic 25.0%
!!! TCTTTTTAGGTAGAAGTTTA+TGG + chr3_2:65868163-65868182 Msa0418210:intron 25.0%
!! AAAATATAAGTGGAGTTTTG+AGG - chr3_2:65868269-65868288 None:intergenic 25.0%
!!! CTAAAATTAACAGCTTTGAA+CGG - chr3_2:65868728-65868747 None:intergenic 25.0%
! ATGTGCAAGTTTATTCAATT+GGG - chr3_2:65868927-65868946 None:intergenic 25.0%
! AAACTATTTATGCAAAACAG+AGG - chr3_2:65869169-65869188 None:intergenic 25.0%
! AACAGGATATCAAACATATT+TGG - chr3_2:65869285-65869304 None:intergenic 25.0%
! TGTTGTAACATGCATTTATT+TGG + chr3_2:65869342-65869361 Msa0418210:intron 25.0%
! ATCAAGAATATGCATAAACA+TGG + chr3_2:65869696-65869715 Msa0418210:intron 25.0%
! TCAAGAATATGCATAAACAT+GGG + chr3_2:65869697-65869716 Msa0418210:intron 25.0%
! AAGAACTTAATTTAGTAGAC+TGG - chr3_2:65869857-65869876 None:intergenic 25.0%
! TTTAATACCTGTAATAAGCT+GGG - chr3_2:65869942-65869961 None:intergenic 25.0%
! ATTTAATACCTGTAATAAGC+TGG - chr3_2:65869943-65869962 None:intergenic 25.0%
!!! GTTTTTTGACTATTGCTATT+AGG + chr3_2:65870271-65870290 Msa0418210:intron 25.0%
!! TGATCTTATGAAATTTTACG+GGG - chr3_2:65870305-65870324 None:intergenic 25.0%
!! TGATAAAAAGGTTTTTGCTT+TGG - chr3_2:65870338-65870357 None:intergenic 25.0%
!! AAGCAAAAACCTTTTTATCA+TGG + chr3_2:65870338-65870357 Msa0418210:intron 25.0%
! ATCATGGAAATGTATTTACT+AGG + chr3_2:65870354-65870373 Msa0418210:intron 25.0%
! TCATGGAAATGTATTTACTA+GGG + chr3_2:65870355-65870374 Msa0418210:intron 25.0%
! ACCATGATATAAAATCTATG+CGG + chr3_2:65870378-65870397 Msa0418210:intron 25.0%
! AATATGTTTGTGAAATTGGT+AGG - chr3_2:65870565-65870584 None:intergenic 25.0%
!! GTTTCAGTATCATAGTATTT+TGG - chr3_2:65870631-65870650 None:intergenic 25.0%
!! TGGCATTTATGAATTTTGTA+TGG - chr3_2:65870686-65870705 None:intergenic 25.0%
!! GACAGTTTTCACAAATTAAT+AGG + chr3_2:65870947-65870966 Msa0418210:intron 25.0%
! ACAAATAAATTTATTTGGGG+TGG + chr3_2:65871606-65871625 Msa0418210:intron 25.0%
! ATTTAGTTGTTTGATGTTGA+TGG + chr3_2:65871774-65871793 Msa0418210:intron 25.0%
! GAGTCAAGATTATAATTTAG+TGG - chr3_2:65871834-65871853 None:intergenic 25.0%
!! GGCTTTTCTATTATAAAACT+GGG - chr3_2:65871920-65871939 None:intergenic 25.0%
!! AGGCTTTTCTATTATAAAAC+TGG - chr3_2:65871921-65871940 None:intergenic 25.0%
! AGAGAAATATGGAGAAAAAA+GGG - chr3_2:65872249-65872268 None:intergenic 25.0%
! AGAAAATTCAAAATACAGAG+AGG - chr3_2:65872427-65872446 None:intergenic 25.0%
!!! TGAGATCAATCAGTTTTATA+CGG + chr3_2:65873035-65873054 Msa0418210:three_prime_UTR 25.0%
!! ATATGATATTGTTGTTGGAA+TGG + chr3_2:65873090-65873109 Msa0418210:three_prime_UTR 25.0%
!! AATTATGTTTTCAACCTCAA+AGG - chr3_2:65873152-65873171 None:intergenic 25.0%
!! TGAGGTTGAAAACATAATTT+TGG + chr3_2:65873153-65873172 Msa0418210:three_prime_UTR 25.0%
! AGTTAACAAAAATGTGTAGA+CGG - chr3_2:65873326-65873345 None:intergenic 25.0%
!!! GTTGGTTTTTATCATTAGTA+TGG + chr3_2:65873362-65873381 Msa0418210:three_prime_UTR 25.0%
! AGAATTAAAACCTAAAGCAA+AGG - chr3_2:65873408-65873427 None:intergenic 25.0%
! ATACATGTGAATAAGTTTCT+CGG - chr3_2:65873581-65873600 None:intergenic 25.0%
! CTTTCTTTATTGTGATATAG+TGG - chr3_2:65873620-65873639 None:intergenic 25.0%
!!! ATTCATCTTTTGAAATGTTC+TGG - chr3_2:65873761-65873780 None:intergenic 25.0%
AATGAAACGAACAAAGGAAT+CGG - chr3_2:65867144-65867163 None:intergenic 30.0%
TAACGAAATGAAACGAACAA+AGG - chr3_2:65867150-65867169 None:intergenic 30.0%
GGAAGATTAGTAGTACTATT+CGG - chr3_2:65867257-65867276 None:intergenic 30.0%
!!! CAATACAAACGGTTTTGAAT+CGG - chr3_2:65867282-65867301 None:intergenic 30.0%
AAACCGTTTGTATTGCAAAA+TGG + chr3_2:65867287-65867306 Msa0418210:CDS 30.0%
! TCACCATTTTGCAATACAAA+CGG - chr3_2:65867293-65867312 None:intergenic 30.0%
!! TCGTTTTGGATAAAAAGGTT+AGG + chr3_2:65867348-65867367 Msa0418210:CDS 30.0%
!! CGTTTTGGATAAAAAGGTTA+GGG + chr3_2:65867349-65867368 Msa0418210:CDS 30.0%
ATTGTATTTGTGAGACTAGT+TGG + chr3_2:65867485-65867504 Msa0418210:intron 30.0%
AAATGAGCTTACAAGACATA+AGG + chr3_2:65867898-65867917 Msa0418210:intron 30.0%
CTGCAAGCTGATAAAAATAA+GGG - chr3_2:65867956-65867975 None:intergenic 30.0%
TCTGCAAGCTGATAAAAATA+AGG - chr3_2:65867957-65867976 None:intergenic 30.0%
CAGAAATAGCTTATGAAAAC+AGG + chr3_2:65867973-65867992 Msa0418210:intron 30.0%
AGAAACAAGAAACACAAGTT+AGG + chr3_2:65868321-65868340 Msa0418210:intron 30.0%
TTTAGGCAAAATCTAAGTGT+TGG + chr3_2:65868420-65868439 Msa0418210:intron 30.0%
AATCAAGATGATTACTAGGA+TGG - chr3_2:65868474-65868493 None:intergenic 30.0%
! CTATCTGAAATTCTGCTAAA+TGG + chr3_2:65868538-65868557 Msa0418210:intron 30.0%
AAACAACTACTTAGATTCTC+TGG + chr3_2:65868767-65868786 Msa0418210:CDS 30.0%
AGCAATAAACCTCTCAAAAT+TGG - chr3_2:65868807-65868826 None:intergenic 30.0%
!! AATTTTGAGAGGTTTATTGC+TGG + chr3_2:65868806-65868825 Msa0418210:CDS 30.0%
CATGTGCAAGTTTATTCAAT+TGG - chr3_2:65868928-65868947 None:intergenic 30.0%
ATGAACATGACTATTGATCT+TGG + chr3_2:65868945-65868964 Msa0418210:intron 30.0%
TCTTTAGTTAAGGAGACATT+TGG + chr3_2:65869022-65869041 Msa0418210:intron 30.0%
AGGAACATATATGGATACAA+GGG - chr3_2:65869149-65869168 None:intergenic 30.0%
!! ATTATGGAAGTACTTCAAAC+AGG - chr3_2:65869302-65869321 None:intergenic 30.0%
! TGTTTGAAGTACTTCCATAA+TGG + chr3_2:65869301-65869320 Msa0418210:intron 30.0%
TCTTACAACACATACCATTA+TGG - chr3_2:65869318-65869337 None:intergenic 30.0%
AAATGCATGTTACATGATTC+AGG - chr3_2:65869389-65869408 None:intergenic 30.0%
TACTGTGTGTCTTATAGATT+CGG + chr3_2:65869469-65869488 Msa0418210:intron 30.0%
CTTCAGTTTGAATCATGTAT+TGG - chr3_2:65869548-65869567 None:intergenic 30.0%
CAATACATGATTCAAACTGA+AGG + chr3_2:65869546-65869565 Msa0418210:CDS 30.0%
! AGCAACTTTTGTCAAAATTG+TGG + chr3_2:65869878-65869897 Msa0418210:CDS 30.0%
TTTGTCAAAATTGTGGAACA+AGG + chr3_2:65869885-65869904 Msa0418210:CDS 30.0%
!! TTTTGAATTCCTATTTGCTG+AGG + chr3_2:65870021-65870040 Msa0418210:intron 30.0%
GTTATAATTCCTCAGCAAAT+AGG - chr3_2:65870033-65870052 None:intergenic 30.0%
GCACATGGTAAAATGTAAAA+TGG - chr3_2:65870185-65870204 None:intergenic 30.0%
!! AATCTTCATTTTAAGGAACC+AGG + chr3_2:65871073-65871092 Msa0418210:intron 30.0%
GCTAAGAAATGTAAATTGGT+AGG - chr3_2:65871203-65871222 None:intergenic 30.0%
GCATGCTAAGAAATGTAAAT+TGG - chr3_2:65871207-65871226 None:intergenic 30.0%
!!! TTTTATGTTTTTTCCCAACC+AGG + chr3_2:65871349-65871368 Msa0418210:intron 30.0%
GTGCATGTTATTAGAGTTAA+AGG - chr3_2:65871376-65871395 None:intergenic 30.0%
! AAGCTAGCAAAATTTTCTGA+GGG + chr3_2:65871409-65871428 Msa0418210:intron 30.0%
TTCTCTGTGTACTTACTATA+AGG + chr3_2:65871501-65871520 Msa0418210:intron 30.0%
GGAAACTCAAAAAATGTCAA+CGG - chr3_2:65871727-65871746 None:intergenic 30.0%
! TTTTCTTTAATGGAGATGGA+CGG - chr3_2:65871748-65871767 None:intergenic 30.0%
TCCATCTCCATTAAAGAAAA+AGG + chr3_2:65871748-65871767 Msa0418210:intron 30.0%
! ACCTTTTTCTTTAATGGAGA+TGG - chr3_2:65871752-65871771 None:intergenic 30.0%
GAAATGGATAAAAATGATGG+AGG - chr3_2:65871941-65871960 None:intergenic 30.0%
GTGGAAATGGATAAAAATGA+TGG - chr3_2:65871944-65871963 None:intergenic 30.0%
! GATTTTACAAGGATATTCAG+TGG + chr3_2:65872094-65872113 Msa0418210:intron 30.0%
CAGAGAAATATGGAGAAAAA+AGG - chr3_2:65872250-65872269 None:intergenic 30.0%
TAGAAAGAAGCAGAGAAATA+TGG - chr3_2:65872260-65872279 None:intergenic 30.0%
! TGTTTCTCAGTTTCTGTTTT+TGG + chr3_2:65872485-65872504 Msa0418210:intron 30.0%
AAAGAAGCAAAACTCTGATT+TGG + chr3_2:65872585-65872604 Msa0418210:intron 30.0%
!!! TTTTTTGGAAATGTTGGACT+AGG + chr3_2:65872621-65872640 Msa0418210:intron 30.0%
GAAAGGAAAAATTCATCATG+TGG - chr3_2:65872842-65872861 None:intergenic 30.0%
!!! TGTTTTGATTTCTCTTTCTC+AGG + chr3_2:65872932-65872951 Msa0418210:intron 30.0%
AAGTAACTAATTGATGCTGA+AGG - chr3_2:65872963-65872982 None:intergenic 30.0%
CATATTCTCGCTTATAAATC+AGG - chr3_2:65873075-65873094 None:intergenic 30.0%
CGAGAATATGATATTGTTGT+TGG + chr3_2:65873085-65873104 Msa0418210:three_prime_UTR 30.0%
! TGGTAATTTTCAACTTGCAT+TGG + chr3_2:65873110-65873129 Msa0418210:three_prime_UTR 30.0%
GATAAAAACCAACTGCAAAT+GGG - chr3_2:65873355-65873374 None:intergenic 30.0%
TGATAAAAACCAACTGCAAA+TGG - chr3_2:65873356-65873375 None:intergenic 30.0%
AGAGAAGGTTTAGTAAAATC+AGG + chr3_2:65873518-65873537 Msa0418210:three_prime_UTR 30.0%
GAGAAACTTATTCACATGTA+TGG + chr3_2:65873580-65873599 Msa0418210:three_prime_UTR 30.0%
TCAAAATGAACAGTTCTGTT+TGG + chr3_2:65873641-65873660 Msa0418210:three_prime_UTR 30.0%
CAAAATGAACAGTTCTGTTT+GGG + chr3_2:65873642-65873661 Msa0418210:three_prime_UTR 30.0%
CATACTTTCTTGATTGTGAT+TGG + chr3_2:65873697-65873716 Msa0418210:three_prime_UTR 30.0%
AAATGGGAAGAGAATGTGAA+TGG - chr3_2:65867058-65867077 None:intergenic 35.0%
GAATTGGGGTTGAAGAAAAT+GGG - chr3_2:65867074-65867093 None:intergenic 35.0%
ATGAAACGAACAAAGGAATC+GGG - chr3_2:65867143-65867162 None:intergenic 35.0%
TTCGTTACGAATTCCTTCAT+CGG + chr3_2:65867163-65867182 Msa0418210:CDS 35.0%
TGAAGATTTGATTCCGATGA+AGG - chr3_2:65867179-65867198 None:intergenic 35.0%
! TGGTGAAGATGTTTCTGATA+AGG + chr3_2:65867307-65867326 Msa0418210:CDS 35.0%
! AGATGTTTCTGATAAGGAGT+CGG + chr3_2:65867313-65867332 Msa0418210:CDS 35.0%
CTATATCTGCAATGGTTTCT+AGG + chr3_2:65867423-65867442 Msa0418210:intron 35.0%
ATTTCAACTTAGGCTCTGTT+TGG + chr3_2:65867543-65867562 Msa0418210:intron 35.0%
!! TTACAAGCATTGACCCATAT+AGG - chr3_2:65868113-65868132 None:intergenic 35.0%
TGATTGCGATACTAATCCAA+TGG + chr3_2:65868202-65868221 Msa0418210:intron 35.0%
GATTGCGATACTAATCCAAT+GGG + chr3_2:65868203-65868222 Msa0418210:intron 35.0%
GCTGGTTAGGCAAAAAAATA+AGG + chr3_2:65868227-65868246 Msa0418210:intron 35.0%
! TTTGTTGTCGTTGAAGCTTT+AGG + chr3_2:65868403-65868422 Msa0418210:intron 35.0%
AAGCTGGAATATATTGTTCG+TGG + chr3_2:65868602-65868621 Msa0418210:CDS 35.0%
AAGTCAATTGCTACAACTCA+AGG + chr3_2:65868653-65868672 Msa0418210:intron 35.0%
! ACTTAGATTCTCTGGAAATG+AGG + chr3_2:65868775-65868794 Msa0418210:CDS 35.0%
! AGGAAACTACCAATTTTGAG+AGG + chr3_2:65868795-65868814 Msa0418210:CDS 35.0%
! TTAAGGAGACATTTGGAGTT+TGG + chr3_2:65869029-65869048 Msa0418210:intron 35.0%
! GAAACGTCATGCTTTATTGA+AGG - chr3_2:65869100-65869119 None:intergenic 35.0%
GAACATATATGGATACAAGG+GGG - chr3_2:65869147-65869166 None:intergenic 35.0%
GGAACATATATGGATACAAG+GGG - chr3_2:65869148-65869167 None:intergenic 35.0%
GAGGAACATATATGGATACA+AGG - chr3_2:65869150-65869169 None:intergenic 35.0%
GCAAAACAGAGGAACATATA+TGG - chr3_2:65869158-65869177 None:intergenic 35.0%
ACACATTCAGCATAATCACT+TGG + chr3_2:65869440-65869459 Msa0418210:intron 35.0%
! AGGCATCTTTTCTCTATACA+AGG + chr3_2:65869566-65869585 Msa0418210:CDS 35.0%
! GGCATCTTTTCTCTATACAA+GGG + chr3_2:65869567-65869586 Msa0418210:CDS 35.0%
AGTACCATCACTTATAAGCA+TGG + chr3_2:65869593-65869612 Msa0418210:CDS 35.0%
TTGATTCTTTGCTTTCCTTC+GGG - chr3_2:65869681-65869700 None:intergenic 35.0%
CTTGATTCTTTGCTTTCCTT+CGG - chr3_2:65869682-65869701 None:intergenic 35.0%
ACTTATTCCCAGCTTATTAC+AGG + chr3_2:65869932-65869951 Msa0418210:CDS 35.0%
AACATGACATTCTTGTGTTG+AGG - chr3_2:65870246-65870265 None:intergenic 35.0%
! GCCGCATAGATTTTATATCA+TGG - chr3_2:65870382-65870401 None:intergenic 35.0%
! ATAGAAGCATGCTTCCATTT+AGG + chr3_2:65870441-65870460 Msa0418210:intron 35.0%
! TTGACCAGATTTTGCCTAAA+TGG - chr3_2:65870458-65870477 None:intergenic 35.0%
ATTTAGGCAAAATCTGGTCA+AGG + chr3_2:65870457-65870476 Msa0418210:intron 35.0%
! TCCTTGACGTTTTATATCCA+TGG - chr3_2:65870723-65870742 None:intergenic 35.0%
ACAAAAGCAGAACTCAAAAC+AGG + chr3_2:65870891-65870910 Msa0418210:intron 35.0%
CAAAAGCAGAACTCAAAACA+GGG + chr3_2:65870892-65870911 Msa0418210:intron 35.0%
GAAATGTAAATTGGTAGGAG+CGG - chr3_2:65871198-65871217 None:intergenic 35.0%
GTTATTAGAGTTAAAGGACC+TGG - chr3_2:65871370-65871389 None:intergenic 35.0%
! GAAGCTAGCAAAATTTTCTG+AGG + chr3_2:65871408-65871427 Msa0418210:intron 35.0%
! AGCTAGCAAAATTTTCTGAG+GGG + chr3_2:65871410-65871429 Msa0418210:intron 35.0%
TAAAACTGGGCTTCTTTGAA+GGG - chr3_2:65871907-65871926 None:intergenic 35.0%
ATAAAACTGGGCTTCTTTGA+AGG - chr3_2:65871908-65871927 None:intergenic 35.0%
!!! GTTTTGATTGGTTAGGTTAG+AGG - chr3_2:65871978-65871997 None:intergenic 35.0%
AGTTTCAATTTCAACGTGGA+TGG - chr3_2:65872000-65872019 None:intergenic 35.0%
GAGTAGTTTCAATTTCAACG+TGG - chr3_2:65872004-65872023 None:intergenic 35.0%
GAAATATGGAGAAAAAAGGG+AGG - chr3_2:65872246-65872265 None:intergenic 35.0%
AACTATCATCCTCCTTTACA+CGG - chr3_2:65872328-65872347 None:intergenic 35.0%
! TAGTTAGTGATGGAAGTTCA+CGG + chr3_2:65872343-65872362 Msa0418210:intron 35.0%
!!! TCTCAGTTTCTGTTTTTGGT+AGG + chr3_2:65872489-65872508 Msa0418210:intron 35.0%
! ACGTTTTTATTGGAGTTGGA+TGG + chr3_2:65872719-65872738 Msa0418210:intron 35.0%
CTTAACTCTCAATACATGCA+CGG - chr3_2:65872763-65872782 None:intergenic 35.0%
GATTGTTCTCAAAGTAGAGT+AGG + chr3_2:65873001-65873020 Msa0418210:CDS 35.0%
!! GCATTGGCTATATTTGATGT+TGG + chr3_2:65873126-65873145 Msa0418210:three_prime_UTR 35.0%
!! ATATTTGATGTTGGCCTTTG+AGG + chr3_2:65873135-65873154 Msa0418210:three_prime_UTR 35.0%
TGATGACTTTCTCAGAAGTA+TGG - chr3_2:65873188-65873207 None:intergenic 35.0%
! TACTTCTGAGAAAGTCATCA+CGG + chr3_2:65873188-65873207 Msa0418210:three_prime_UTR 35.0%
TAAGCATTAGAATCAGGATC+TGG - chr3_2:65873301-65873320 None:intergenic 35.0%
ACGGAATAAGCATTAGAATC+AGG - chr3_2:65873307-65873326 None:intergenic 35.0%
! AGTAGCTTATCGGTTATTCT+TGG + chr3_2:65873431-65873450 Msa0418210:three_prime_UTR 35.0%
! GTAGCTTATCGGTTATTCTT+GGG + chr3_2:65873432-65873451 Msa0418210:three_prime_UTR 35.0%
TGAAGTTTCATGAACAGAGA+AGG + chr3_2:65873503-65873522 Msa0418210:three_prime_UTR 35.0%
GTGATATAGTGGCATGTATT+CGG - chr3_2:65873609-65873628 None:intergenic 35.0%
!! TGAAATGTTCTGGTTTCACA+TGG - chr3_2:65873751-65873770 None:intergenic 35.0%
GGAATTGGGGTTGAAGAAAA+TGG - chr3_2:65867075-65867094 None:intergenic 40.0%
ACAAAGGAATCGGGAATTGA+GGG - chr3_2:65867134-65867153 None:intergenic 40.0%
AACAAAGGAATCGGGAATTG+AGG - chr3_2:65867135-65867154 None:intergenic 40.0%
ACCGACAAAAAACAACCAAC+CGG - chr3_2:65867227-65867246 None:intergenic 40.0%
!!! TACAAACGGTTTTGAATCGG+CGG - chr3_2:65867279-65867298 None:intergenic 40.0%
!!! CGGTGTCGTTTTGGATAAAA+AGG + chr3_2:65867343-65867362 Msa0418210:CDS 40.0%
ACTACTAAGCATCTTTGGTC+TGG + chr3_2:65867398-65867417 Msa0418210:intron 40.0%
! GCTGATAAACTAGCTTGTAG+CGG + chr3_2:65867587-65867606 Msa0418210:intron 40.0%
AAATAGGGCCATAGCCTATA+TGG + chr3_2:65868096-65868115 Msa0418210:intron 40.0%
AATAGGGCCATAGCCTATAT+GGG + chr3_2:65868097-65868116 Msa0418210:intron 40.0%
GAAACTCTTACGGTAGATGT+TGG + chr3_2:65868140-65868159 Msa0418210:intron 40.0%
!!! CGGTAGATGTTGGTCTTTTT+AGG + chr3_2:65868150-65868169 Msa0418210:intron 40.0%
GTATCGCAATCATGAAGAGA+AGG - chr3_2:65868194-65868213 None:intergenic 40.0%
ACTGTCTTAGCTGTAAGGAT+AGG + chr3_2:65868346-65868365 Msa0418210:intron 40.0%
CTGTCTTAGCTGTAAGGATA+GGG + chr3_2:65868347-65868366 Msa0418210:intron 40.0%
CACATTCGACAAGAAGTTCA+AGG - chr3_2:65868377-65868396 None:intergenic 40.0%
CTTGAACTTCTTGTCGAATG+TGG + chr3_2:65868375-65868394 Msa0418210:intron 40.0%
! GAAGTGTTTCATGTGGTCTA+CGG - chr3_2:65868450-65868469 None:intergenic 40.0%
ACCACTTGAAAGACTTAAGC+TGG + chr3_2:65868586-65868605 Msa0418210:CDS 40.0%
TCCAGCTTAAGTCTTTCAAG+TGG - chr3_2:65868590-65868609 None:intergenic 40.0%
ATATTGTTCGTGGTGAGAAG+AGG + chr3_2:65868612-65868631 Msa0418210:CDS 40.0%
! CTCAAGGTTTGAGAGGTTTT+TGG + chr3_2:65868669-65868688 Msa0418210:intron 40.0%
!! AGGTTTGAGAGGTTTTTGGA+AGG + chr3_2:65868673-65868692 Msa0418210:intron 40.0%
!! GGTTTGAGAGGTTTTTGGAA+GGG + chr3_2:65868674-65868693 Msa0418210:intron 40.0%
!! GTTTGAGAGGTTTTTGGAAG+GGG + chr3_2:65868675-65868694 Msa0418210:CDS 40.0%
CGGTTCGCAGAATATTTAGA+AGG - chr3_2:65868703-65868722 None:intergenic 40.0%
!! ATTAACAGCTTTGAACGGAG+CGG - chr3_2:65868723-65868742 None:intergenic 40.0%
ACAGTGAGTCCATGTGATTA+TGG + chr3_2:65869230-65869249 Msa0418210:intron 40.0%
CAGTGAGTCCATGTGATTAT+GGG + chr3_2:65869231-65869250 Msa0418210:intron 40.0%
AACATGGTCCCATAATCACA+TGG - chr3_2:65869242-65869261 None:intergenic 40.0%
! GCTGATTTCAGCTTCTAACA+TGG - chr3_2:65869258-65869277 None:intergenic 40.0%
TGTTAGAAGCTGAAATCAGC+AGG + chr3_2:65869258-65869277 Msa0418210:intron 40.0%
ATAGATTCGGACCAAGATAG+TGG + chr3_2:65869482-65869501 Msa0418210:intron 40.0%
GAAACTTTGGGTGGTGTAAT+TGG + chr3_2:65869516-65869535 Msa0418210:CDS 40.0%
CCATAAAAGACTGCACTAGA+AGG - chr3_2:65869621-65869640 None:intergenic 40.0%
! CCTTCTAGTGCAGTCTTTTA+TGG + chr3_2:65869618-65869637 Msa0418210:CDS 40.0%
GAATATGCATAAACATGGGC+AGG + chr3_2:65869701-65869720 Msa0418210:intron 40.0%
CAGTAAGGACATTGTTGCAT+GGG + chr3_2:65869757-65869776 Msa0418210:CDS 40.0%
AGTAAGGACATTGTTGCATG+GGG + chr3_2:65869758-65869777 Msa0418210:CDS 40.0%
TGCTACATACCCATTTGAAG+TGG + chr3_2:65869806-65869825 Msa0418210:CDS 40.0%
GTCAAAATTGTGGAACAAGG+AGG + chr3_2:65869888-65869907 Msa0418210:CDS 40.0%
!! TTTTACCATGTGCTGATCAC+AGG + chr3_2:65870192-65870211 Msa0418210:intron 40.0%
AAGATCGAAGTTTAGACCAG+AGG - chr3_2:65870419-65870438 None:intergenic 40.0%
GCTTCCATTTAGGCAAAATC+TGG + chr3_2:65870451-65870470 Msa0418210:intron 40.0%
CAAAATCTGGTCAAGGTAGT+CGG + chr3_2:65870464-65870483 Msa0418210:intron 40.0%
! TCTTTTTCCTACGTAGGATC+AGG + chr3_2:65870489-65870508 Msa0418210:intron 40.0%
! CTTTTTCCTACGTAGGATCA+GGG + chr3_2:65870490-65870509 Msa0418210:intron 40.0%
TGTCACAAGATTGCAAATCG+CGG + chr3_2:65870516-65870535 Msa0418210:intron 40.0%
CAAATCGCGGAATTGTAACA+TGG + chr3_2:65870529-65870548 Msa0418210:intron 40.0%
!! CCATGGCTTTAGTTTGTTTG+TGG - chr3_2:65870706-65870725 None:intergenic 40.0%
CCACAAACAAACTAAAGCCA+TGG + chr3_2:65870703-65870722 Msa0418210:intron 40.0%
GCCATGGATATAAAACGTCA+AGG + chr3_2:65870719-65870738 Msa0418210:intron 40.0%
AGGGCAATTCAAACATGAGA+GGG + chr3_2:65870911-65870930 Msa0418210:intron 40.0%
TAAGCACACGAGACATGAAA+GGG - chr3_2:65871033-65871052 None:intergenic 40.0%
TTAAGCACACGAGACATGAA+AGG - chr3_2:65871034-65871053 None:intergenic 40.0%
!! CATTTTAAGGAACCAGGTTG+TGG + chr3_2:65871079-65871098 Msa0418210:intron 40.0%
TCGCAAGTCAAAGTGTAGAA+TGG - chr3_2:65871276-65871295 None:intergenic 40.0%
TAGAGTTAAAGGACCTGGTT+GGG - chr3_2:65871365-65871384 None:intergenic 40.0%
TTAGAGTTAAAGGACCTGGT+TGG - chr3_2:65871366-65871385 None:intergenic 40.0%
AATAACATGCACACAGTCAG+CGG + chr3_2:65871384-65871403 Msa0418210:intron 40.0%
!! GCTAGCAAAATTTTCTGAGG+GGG + chr3_2:65871411-65871430 Msa0418210:intron 40.0%
AAAAATGTCAACGGTGTGCA+CGG - chr3_2:65871718-65871737 None:intergenic 40.0%
! AAAACTGGGCTTCTTTGAAG+GGG - chr3_2:65871906-65871925 None:intergenic 40.0%
TAGGTTAGAGGTGAGTGTAA+GGG - chr3_2:65871966-65871985 None:intergenic 40.0%
TTAGGTTAGAGGTGAGTGTA+AGG - chr3_2:65871967-65871986 None:intergenic 40.0%
!!! GTGGATGGTTTTGATTGGTT+AGG - chr3_2:65871985-65872004 None:intergenic 40.0%
!!! TCAACGTGGATGGTTTTGAT+TGG - chr3_2:65871990-65872009 None:intergenic 40.0%
AAATGACTATGGAGTACAGG+CGG - chr3_2:65872033-65872052 None:intergenic 40.0%
CTGAAATGACTATGGAGTAC+AGG - chr3_2:65872036-65872055 None:intergenic 40.0%
!!! TTTTGGGGCTGAAATGACTA+TGG - chr3_2:65872044-65872063 None:intergenic 40.0%
! TCATCTTCCCAGCGATTTTT+GGG - chr3_2:65872060-65872079 None:intergenic 40.0%
! TTCATCTTCCCAGCGATTTT+TGG - chr3_2:65872061-65872080 None:intergenic 40.0%
CAAGGATATTCAGTGGAAGT+TGG + chr3_2:65872101-65872120 Msa0418210:intron 40.0%
GATATTCAGTGGAAGTTGGA+GGG + chr3_2:65872105-65872124 Msa0418210:intron 40.0%
ATATTCAGTGGAAGTTGGAG+GGG + chr3_2:65872106-65872125 Msa0418210:intron 40.0%
TAGTCACAAATTGCAGAGAC+TGG + chr3_2:65872143-65872162 Msa0418210:intron 40.0%
TGAGATGGAATGTTTCACGA+TGG + chr3_2:65872169-65872188 Msa0418210:intron 40.0%
AAAAAAGGGAGGTTCATGTC+CGG - chr3_2:65872235-65872254 None:intergenic 40.0%
!! TACCGATTCTTTCCGTGTAA+AGG + chr3_2:65872313-65872332 Msa0418210:intron 40.0%
CTCCTTTACACGGAAAGAAT+CGG - chr3_2:65872318-65872337 None:intergenic 40.0%
AGGAGGATGATAGTTAGTGA+TGG + chr3_2:65872333-65872352 Msa0418210:intron 40.0%
TATAGACGAGACTGTGAGAA+GGG - chr3_2:65872404-65872423 None:intergenic 40.0%
!! TTGGTAGGAGTATTGTGATG+AGG + chr3_2:65872504-65872523 Msa0418210:intron 40.0%
! GGAAATGTTGGACTAGGATA+TGG + chr3_2:65872627-65872646 Msa0418210:intron 40.0%
CCAATAAAAACGTGTCCATG+TGG - chr3_2:65872712-65872731 None:intergenic 40.0%
! CCACATGGACACGTTTTTAT+TGG + chr3_2:65872709-65872728 Msa0418210:intron 40.0%
! GGACACGTTTTTATTGGAGT+TGG + chr3_2:65872715-65872734 Msa0418210:intron 40.0%
CGTGCATGTATTGAGAGTTA+AGG + chr3_2:65872761-65872780 Msa0418210:intron 40.0%
! ACTTTCTCAGAAGTATGGAG+TGG - chr3_2:65873183-65873202 None:intergenic 40.0%
GCTTTACAGTCAATATACCC+AGG + chr3_2:65873252-65873271 Msa0418210:three_prime_UTR 40.0%
GCAACTAAGTTTATGTGCCT+GGG - chr3_2:65873272-65873291 None:intergenic 40.0%
TGCAACTAAGTTTATGTGCC+TGG - chr3_2:65873273-65873292 None:intergenic 40.0%
! CTTCTTTTCCCATTTGCAGT+TGG + chr3_2:65873344-65873363 Msa0418210:three_prime_UTR 40.0%
CAAGCAAGTTCCTTTGCTTT+AGG + chr3_2:65873395-65873414 Msa0418210:three_prime_UTR 40.0%
! CACAAGTAGAGTATCCAGTT+AGG - chr3_2:65873469-65873488 None:intergenic 40.0%
!! TTCACATGGAATGGATTGGA+GGG - chr3_2:65873737-65873756 None:intergenic 40.0%
!! TTTCACATGGAATGGATTGG+AGG - chr3_2:65873738-65873757 None:intergenic 40.0%
TGGTTTCACATGGAATGGAT+TGG - chr3_2:65873741-65873760 None:intergenic 40.0%
!! TGTTCTGGTTTCACATGGAA+TGG - chr3_2:65873746-65873765 None:intergenic 40.0%
TGGGAAGAGAATGTGAATGG+TGG - chr3_2:65867055-65867074 None:intergenic 45.0%
GACAAAAAACAACCAACCGG+CGG - chr3_2:65867224-65867243 None:intergenic 45.0%
!!! GCCGGTTGGTTGTTTTTTGT+CGG + chr3_2:65867223-65867242 Msa0418210:intron 45.0%
!!! ACAAACGGTTTTGAATCGGC+GGG - chr3_2:65867278-65867297 None:intergenic 45.0%
!! GATAAGGAGTCGGTGTCAAA+CGG + chr3_2:65867323-65867342 Msa0418210:CDS 45.0%
!! GTCTGGTGCTATATCTGCAA+TGG + chr3_2:65867415-65867434 Msa0418210:intron 45.0%
! GCATTGACCCATATAGGCTA+TGG - chr3_2:65868107-65868126 None:intergenic 45.0%
GATACTAATCCAATGGGTGC+TGG + chr3_2:65868209-65868228 Msa0418210:intron 45.0%
!! TAATCCAATGGGTGCTGGTT+AGG + chr3_2:65868214-65868233 Msa0418210:intron 45.0%
AGGTCACTGTCTTAGCTGTA+AGG + chr3_2:65868341-65868360 Msa0418210:intron 45.0%
!! GGATGGAGAAGTGTTTCATG+TGG - chr3_2:65868457-65868476 None:intergenic 45.0%
GCTACAACTCAAGGTTTGAG+AGG + chr3_2:65868662-65868681 Msa0418210:intron 45.0%
CACGTACAGTATCAAGTGGA+AGG - chr3_2:65868865-65868884 None:intergenic 45.0%
CTTCCACTTGATACTGTACG+TGG + chr3_2:65868863-65868882 Msa0418210:intron 45.0%
TCACCACGTACAGTATCAAG+TGG - chr3_2:65868869-65868888 None:intergenic 45.0%
! ATTCAGGTTCTGACACTGGT+TGG - chr3_2:65869373-65869392 None:intergenic 45.0%
! CATGATTCAGGTTCTGACAC+TGG - chr3_2:65869377-65869396 None:intergenic 45.0%
GGAGCCATGCTTATAAGTGA+TGG - chr3_2:65869600-65869619 None:intergenic 45.0%
TCTTATCTGCATTCACCCGA+AGG + chr3_2:65869663-65869682 Msa0418210:intron 45.0%
TGCCTTTGATCAGCTAGAGT+TGG + chr3_2:65869731-65869750 Msa0418210:CDS 45.0%
GCCTTTGATCAGCTAGAGTT+GGG + chr3_2:65869732-65869751 Msa0418210:CDS 45.0%
CCTTTGATCAGCTAGAGTTG+GGG + chr3_2:65869733-65869752 Msa0418210:CDS 45.0%
CCATGCAACAATGTCCTTAC+TGG - chr3_2:65869759-65869778 None:intergenic 45.0%
CCAGTAAGGACATTGTTGCA+TGG + chr3_2:65869756-65869775 Msa0418210:CDS 45.0%
! CATACCCATTTGAAGTGGTG+AGG + chr3_2:65869811-65869830 Msa0418210:CDS 45.0%
GGGAATAAGTCCTGCATAGA+GGG - chr3_2:65869922-65869941 None:intergenic 45.0%
TGGGAATAAGTCCTGCATAG+AGG - chr3_2:65869923-65869942 None:intergenic 45.0%
!! GATCACAGGCTAGCTCTATA+TGG + chr3_2:65870206-65870225 Msa0418210:intron 45.0%
GCTTTATGATTGCCTTCCTC+TGG + chr3_2:65870400-65870419 Msa0418210:intron 45.0%
TCGAAGTTTAGACCAGAGGA+AGG - chr3_2:65870415-65870434 None:intergenic 45.0%
! TCGGAGTCTTTTTCCTACGT+AGG + chr3_2:65870483-65870502 Msa0418210:intron 45.0%
GGAAAGGGTCACACATCAAA+CGG + chr3_2:65870779-65870798 Msa0418210:intron 45.0%
GAAAGGGTCACACATCAAAC+GGG + chr3_2:65870780-65870799 Msa0418210:intron 45.0%
TCTATGCATGCCTGATGCAA+AGG + chr3_2:65870820-65870839 Msa0418210:intron 45.0%
CTATGCATGCCTGATGCAAA+GGG + chr3_2:65870821-65870840 Msa0418210:intron 45.0%
CAGGGCAATTCAAACATGAG+AGG + chr3_2:65870910-65870929 Msa0418210:intron 45.0%
! ATGAGAGGGAGTACGACAAA+TGG + chr3_2:65870925-65870944 Msa0418210:intron 45.0%
CAGAGCAGTTATCCACAGAT+CGG - chr3_2:65871107-65871126 None:intergenic 45.0%
AAACACAGCGAAACCTAGCA+TGG + chr3_2:65871237-65871256 Msa0418210:intron 45.0%
CGATTTGACTACCACGATTG+CGG + chr3_2:65871293-65871312 Msa0418210:intron 45.0%
TACTTAAAGGACCGCAATCG+TGG - chr3_2:65871307-65871326 None:intergenic 45.0%
AAAATGTCAACGGTGTGCAC+GGG - chr3_2:65871717-65871736 None:intergenic 45.0%
TATGGAGTACAGGCGGATAA+TGG - chr3_2:65872026-65872045 None:intergenic 45.0%
ATTTCAGCCCCAAAAATCGC+TGG + chr3_2:65872049-65872068 Msa0418210:intron 45.0%
TTTCAGCCCCAAAAATCGCT+GGG + chr3_2:65872050-65872069 Msa0418210:intron 45.0%
! CATCTTCCCAGCGATTTTTG+GGG - chr3_2:65872059-65872078 None:intergenic 45.0%
GGATATTCAGTGGAAGTTGG+AGG + chr3_2:65872104-65872123 Msa0418210:intron 45.0%
TATTCAGTGGAAGTTGGAGG+GGG + chr3_2:65872107-65872126 Msa0418210:intron 45.0%
TCACAAATTGCAGAGACTGG+TGG + chr3_2:65872146-65872165 Msa0418210:intron 45.0%
GATGGAATGTTTCACGATGG+TGG + chr3_2:65872172-65872191 Msa0418210:intron 45.0%
! AATGTTTCACGATGGTGGCA+GGG + chr3_2:65872177-65872196 Msa0418210:intron 45.0%
CGATTCTTTCCGTGTAAAGG+AGG + chr3_2:65872316-65872335 Msa0418210:intron 45.0%
GTATAGACGAGACTGTGAGA+AGG - chr3_2:65872405-65872424 None:intergenic 45.0%
GAGTTTGAGAGAGAGAGAAG+AGG - chr3_2:65872458-65872477 None:intergenic 45.0%
! GAGTATTGTGATGAGGAGTC+AGG + chr3_2:65872511-65872530 Msa0418210:intron 45.0%
! TTGCTTCTTTTCCCATCGCT+GGG - chr3_2:65872575-65872594 None:intergenic 45.0%
! TTTGCTTCTTTTCCCATCGC+TGG - chr3_2:65872576-65872595 None:intergenic 45.0%
! GTTGGACTAGGATATGGTGT+AGG + chr3_2:65872633-65872652 Msa0418210:intron 45.0%
CTGAGAAAGTCATCACGGTA+CGG + chr3_2:65873193-65873212 Msa0418210:three_prime_UTR 45.0%
! CTCTACCAGCAGAAAGCTTT+TGG + chr3_2:65873225-65873244 Msa0418210:three_prime_UTR 45.0%
! AGCAAAGGAACTTGCTTGCT+TGG - chr3_2:65873393-65873412 None:intergenic 45.0%
!!! GGGCATTTTTTGCACCTAAC+TGG + chr3_2:65873452-65873471 Msa0418210:three_prime_UTR 45.0%
TGAACAGTTCTGTTTGGGAG+AGG + chr3_2:65873647-65873666 Msa0418210:three_prime_UTR 45.0%
GAACAGTTCTGTTTGGGAGA+GGG + chr3_2:65873648-65873667 Msa0418210:three_prime_UTR 45.0%
!! TTTGGGAGAGGGAAGTGTTT+AGG + chr3_2:65873659-65873678 Msa0418210:three_prime_UTR 45.0%
!! AGAGGGAAGTGTTTAGGAGT+TGG + chr3_2:65873665-65873684 Msa0418210:three_prime_UTR 45.0%
!! TCACATGGAATGGATTGGAG+GGG - chr3_2:65873736-65873755 None:intergenic 45.0%
!! TAGTTTAATAAAAAAATAAT+AGG + chr3_2:65869183-65869202 Msa0418210:intron 5.0%
!!! TTTTATTTTTTCTATATATT+TGG - chr3_2:65871437-65871456 None:intergenic 5.0%
!!! ACAAATTTATTAAAATTTTA+TGG - chr3_2:65872915-65872934 None:intergenic 5.0%
CGGGATTGGGATTGGAATTG+GGG - chr3_2:65867088-65867107 None:intergenic 50.0%
CCGGGATTGGGATTGGAATT+GGG - chr3_2:65867089-65867108 None:intergenic 50.0%
CCCAATTCCAATCCCAATCC+CGG + chr3_2:65867086-65867105 Msa0418210:CDS 50.0%
TCCGGGATTGGGATTGGAAT+TGG - chr3_2:65867090-65867109 None:intergenic 50.0%
AATTCCAATCCCAATCCCGG+AGG + chr3_2:65867089-65867108 Msa0418210:CDS 50.0%
ATTCCAATCCCAATCCCGGA+GGG + chr3_2:65867090-65867109 Msa0418210:CDS 50.0%
CGGAATCAAATCTTCACCGC+CGG + chr3_2:65867183-65867202 Msa0418210:CDS 50.0%
!!! GGTGTCAAACGGTGTCGTTT+TGG + chr3_2:65867334-65867353 Msa0418210:CDS 50.0%
AAGGTTAGGGCTAGAGAACG+CGG + chr3_2:65867362-65867381 Msa0418210:CDS 50.0%
TTTGCCTAACCAGCACCCAT+TGG - chr3_2:65868221-65868240 None:intergenic 50.0%
GTGTTTCATGTGGTCTACGG+TGG - chr3_2:65868447-65868466 None:intergenic 50.0%
!! TTTATTGCTGGTGCTGCTGC+TGG + chr3_2:65868818-65868837 Msa0418210:CDS 50.0%
!! TTATTGCTGGTGCTGCTGCT+GGG + chr3_2:65868819-65868838 Msa0418210:CDS 50.0%
CCCCAACTCTAGCTGATCAA+AGG - chr3_2:65869736-65869755 None:intergenic 50.0%
TTGTTGCATGGGGCTATTGC+TGG + chr3_2:65869768-65869787 Msa0418210:CDS 50.0%
! ACCCATTTGAAGTGGTGAGG+AGG + chr3_2:65869814-65869833 Msa0418210:CDS 50.0%
GCCTCCTCACCACTTCAAAT+GGG - chr3_2:65869818-65869837 None:intergenic 50.0%
TGCCTCCTCACCACTTCAAA+TGG - chr3_2:65869819-65869838 None:intergenic 50.0%
TTTCCTACGTAGGATCAGGG+AGG + chr3_2:65870493-65870512 Msa0418210:intron 50.0%
AGAGCAGTGCAGAGAACAGA+GGG + chr3_2:65870758-65870777 Msa0418210:intron 50.0%
AGTGCAGAGAACAGAGGGAA+AGG + chr3_2:65870763-65870782 Msa0418210:intron 50.0%
GTGCAGAGAACAGAGGGAAA+GGG + chr3_2:65870764-65870783 Msa0418210:intron 50.0%
GGCATGCATAGACTCACACA+AGG - chr3_2:65870812-65870831 None:intergenic 50.0%
AAAGGGTCGTGCATGCATGA+TGG + chr3_2:65870838-65870857 Msa0418210:intron 50.0%
AAGGGTCGTGCATGCATGAT+GGG + chr3_2:65870839-65870858 Msa0418210:intron 50.0%
!! GCATGATTCCACCGGTTCTA+CGG + chr3_2:65871154-65871173 Msa0418210:intron 50.0%
GTAAATTGGTAGGAGCGGCT+GGG - chr3_2:65871193-65871212 None:intergenic 50.0%
TGTAAATTGGTAGGAGCGGC+TGG - chr3_2:65871194-65871213 None:intergenic 50.0%
TGAGACTTTGCGACCATGCT+AGG - chr3_2:65871253-65871272 None:intergenic 50.0%
GGTGAGTGTAAGGGTGGAAA+TGG - chr3_2:65871957-65871976 None:intergenic 50.0%
GTTAGAGGTGAGTGTAAGGG+TGG - chr3_2:65871963-65871982 None:intergenic 50.0%
! GAATGTTTCACGATGGTGGC+AGG + chr3_2:65872176-65872195 Msa0418210:intron 50.0%
GGAAGTTCACGGTGCATAGA+TGG + chr3_2:65872354-65872373 Msa0418210:intron 50.0%
AGTTCACGGTGCATAGATGG+TGG + chr3_2:65872357-65872376 Msa0418210:intron 50.0%
GTTCACGGTGCATAGATGGT+GGG + chr3_2:65872358-65872377 Msa0418210:intron 50.0%
!! GTGCATAGATGGTGGGCTAT+GGG + chr3_2:65872365-65872384 Msa0418210:intron 50.0%
TGATGAGGAGTCAGGTCTGT+TGG + chr3_2:65872519-65872538 Msa0418210:intron 50.0%
TCAGCATCGTAACGTCCACA+TGG + chr3_2:65872694-65872713 Msa0418210:intron 50.0%
CCAGTCCAAAAGCTTTCTGC+TGG - chr3_2:65873233-65873252 None:intergenic 50.0%
! CCAGCAGAAAGCTTTTGGAC+TGG + chr3_2:65873230-65873249 Msa0418210:three_prime_UTR 50.0%
!! CACATGGAATGGATTGGAGG+GGG - chr3_2:65873735-65873754 None:intergenic 50.0%
TTCCAATCCCAATCCCGGAG+GGG + chr3_2:65867091-65867110 Msa0418210:CDS 55.0%
AGAAATAAGCCTCCCCCTCC+GGG - chr3_2:65867107-65867126 None:intergenic 55.0%
GAGAAATAAGCCTCCCCCTC+CGG - chr3_2:65867108-65867127 None:intergenic 55.0%
CAAATCTTCACCGCCGGCAA+CGG + chr3_2:65867189-65867208 Msa0418210:CDS 55.0%
!! TATTGCTGGTGCTGCTGCTG+GGG + chr3_2:65868820-65868839 Msa0418210:CDS 55.0%
! CAGGTTCTGACACTGGTTGG+AGG - chr3_2:65869370-65869389 None:intergenic 55.0%
! ACCAAGATAGTGGCACCTGG+CGG + chr3_2:65869492-65869511 Msa0418210:CDS 55.0%
GCACCTGGCGGAGAAACTTT+GGG + chr3_2:65869504-65869523 Msa0418210:CDS 55.0%
AGCTAGAGTTGGGGCCAGTA+AGG + chr3_2:65869742-65869761 Msa0418210:CDS 55.0%
GGCATTTCAGCCCTCTATGC+AGG + chr3_2:65869909-65869928 Msa0418210:CDS 55.0%
! GCTAGCCTGTGATCAGCACA+TGG - chr3_2:65870200-65870219 None:intergenic 55.0%
ACACCTCCCTGATCCTACGT+AGG - chr3_2:65870499-65870518 None:intergenic 55.0%
CAGAGCAGTGCAGAGAACAG+AGG + chr3_2:65870757-65870776 Msa0418210:intron 55.0%
CATGCACGACCCTTTGCATC+AGG - chr3_2:65870833-65870852 None:intergenic 55.0%
! GTCGTGCATGCATGATGGGA+AGG + chr3_2:65870843-65870862 Msa0418210:intron 55.0%
CACAGATCGGATCCACAACC+TGG - chr3_2:65871094-65871113 None:intergenic 55.0%
CAGGTTGTGGATCCGATCTG+TGG + chr3_2:65871092-65871111 Msa0418210:intron 55.0%
GTCATGGAGAGCCGTAGAAC+CGG - chr3_2:65871168-65871187 None:intergenic 55.0%
TGGAAGTTGGAGGGGGTTGT+TGG + chr3_2:65872114-65872133 Msa0418210:intron 55.0%
! TGCAGAGACTGGTGGTGAGA+TGG + chr3_2:65872154-65872173 Msa0418210:intron 55.0%
!! GGTGCATAGATGGTGGGCTA+TGG + chr3_2:65872364-65872383 Msa0418210:intron 55.0%
CATCGCTGGGAAGCAAAGAG+GGG - chr3_2:65872562-65872581 None:intergenic 55.0%
CCATCGCTGGGAAGCAAAGA+GGG - chr3_2:65872563-65872582 None:intergenic 55.0%
CCTCTTTGCTTCCCAGCGAT+GGG + chr3_2:65872561-65872580 Msa0418210:intron 55.0%
TCCAATCCCAATCCCGGAGG+GGG + chr3_2:65867092-65867111 Msa0418210:CDS 60.0%
! CGGACCAAGATAGTGGCACC+TGG + chr3_2:65869489-65869508 Msa0418210:CDS 60.0%
!! TCCGCCAGGTGCCACTATCT+TGG - chr3_2:65869496-65869515 None:intergenic 60.0%
GGCACCTGGCGGAGAAACTT+TGG + chr3_2:65869503-65869522 Msa0418210:CDS 60.0%
CCACCCAAAGTTTCTCCGCC+AGG - chr3_2:65869510-65869529 None:intergenic 60.0%
CCTGGCGGAGAAACTTTGGG+TGG + chr3_2:65869507-65869526 Msa0418210:CDS 60.0%
ATGGAGAGCCGTAGAACCGG+TGG - chr3_2:65871165-65871184 None:intergenic 60.0%
TAGGAGCGGCTGGGTTGTCA+TGG - chr3_2:65871184-65871203 None:intergenic 60.0%
! CACGATGGTGGCAGGGAGTT+TGG + chr3_2:65872184-65872203 Msa0418210:intron 60.0%
TGGCAGGGAGTTTGGACCCA+CGG + chr3_2:65872192-65872211 Msa0418210:intron 60.0%
GAGTTTGGACCCACGGGACA+CGG + chr3_2:65872199-65872218 Msa0418210:intron 60.0%
AGTTTGGACCCACGGGACAC+GGG + chr3_2:65872200-65872219 Msa0418210:intron 60.0%
GGGAGGTTCATGTCCGGCAT+TGG - chr3_2:65872229-65872248 None:intergenic 60.0%
CCCTCTTTGCTTCCCAGCGA+TGG + chr3_2:65872560-65872579 Msa0418210:intron 60.0%
CCCATCGCTGGGAAGCAAAG+AGG - chr3_2:65872564-65872583 None:intergenic 60.0%
TCCCCCTCCGGGATTGGGAT+TGG - chr3_2:65867096-65867115 None:intergenic 65.0%
AATCCCAATCCCGGAGGGGG+AGG + chr3_2:65867095-65867114 Msa0418210:CDS 65.0%
AAGCCTCCCCCTCCGGGATT+GGG - chr3_2:65867101-65867120 None:intergenic 65.0%
TAAGCCTCCCCCTCCGGGAT+TGG - chr3_2:65867102-65867121 None:intergenic 65.0%
GCAGCACGCAGCAGCAGTGA+CGG + chr3_2:65870865-65870884 Msa0418210:intron 65.0%
GGAATCATGCGCGCTCGCTG+AGG - chr3_2:65871144-65871163 None:intergenic 65.0%
GCGAGCGCGCATGATTCCAC+CGG + chr3_2:65871146-65871165 Msa0418210:intron 65.0%
GGCAGGGAGTTTGGACCCAC+GGG + chr3_2:65872193-65872212 Msa0418210:intron 65.0%
GTTTGGACCCACGGGACACG+GGG + chr3_2:65872201-65872220 Msa0418210:intron 65.0%
ATTGGAGCCCCGTGTCCCGT+GGG - chr3_2:65872211-65872230 None:intergenic 65.0%
TTCACCGCCGGCAACGGCGA+AGG + chr3_2:65867195-65867214 Msa0418210:CDS 70.0%
TCACCGCCGGCAACGGCGAA+GGG + chr3_2:65867196-65867215 Msa0418210:CDS 70.0%
GAACCCTTCGCCGTTGCCGG+CGG - chr3_2:65867202-65867221 None:intergenic 70.0%
GCGGAACCCTTCGCCGTTGC+CGG - chr3_2:65867205-65867224 None:intergenic 70.0%
GCAACGGCGAAGGGTTCCGC+CGG + chr3_2:65867205-65867224 Msa0418210:CDS 70.0%
CATTGGAGCCCCGTGTCCCG+TGG - chr3_2:65872212-65872231 None:intergenic 70.0%
GGGACACGGGGCTCCAATGC+CGG + chr3_2:65872213-65872232 Msa0418210:intron 70.0%
CGGCGAAGGGTTCCGCCGGT+TGG + chr3_2:65867209-65867228 Msa0418210:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 65867020 65873895 65867020 ID=Msa0418210;Name=Msa0418210
chr3_2 mRNA 65867020 65873895 65867020 ID=Msa0418210-mRNA-1;Parent=Msa0418210;Name=Msa0418210-mRNA-1;_AED=0.08;_eAED=0.11;_QI=0|0.33|0.14|1|0.16|0.14|7|873|364
chr3_2 exon 65867020 65867240 65867020 ID=Msa0418210-mRNA-1:exon:14867;Parent=Msa0418210-mRNA-1
chr3_2 exon 65867250 65867383 65867250 ID=Msa0418210-mRNA-1:exon:14868;Parent=Msa0418210-mRNA-1
chr3_2 exon 65868574 65868654 65868574 ID=Msa0418210-mRNA-1:exon:14869;Parent=Msa0418210-mRNA-1
chr3_2 exon 65868675 65868877 65868675 ID=Msa0418210-mRNA-1:exon:14870;Parent=Msa0418210-mRNA-1
chr3_2 exon 65869486 65869641 65869486 ID=Msa0418210-mRNA-1:exon:14871;Parent=Msa0418210-mRNA-1
chr3_2 exon 65869723 65869953 65869723 ID=Msa0418210-mRNA-1:exon:14872;Parent=Msa0418210-mRNA-1
chr3_2 exon 65872954 65873895 65872954 ID=Msa0418210-mRNA-1:exon:14873;Parent=Msa0418210-mRNA-1
chr3_2 CDS 65867020 65867240 65867020 ID=Msa0418210-mRNA-1:cds;Parent=Msa0418210-mRNA-1
chr3_2 CDS 65867250 65867383 65867250 ID=Msa0418210-mRNA-1:cds;Parent=Msa0418210-mRNA-1
chr3_2 CDS 65868574 65868654 65868574 ID=Msa0418210-mRNA-1:cds;Parent=Msa0418210-mRNA-1
chr3_2 CDS 65868675 65868877 65868675 ID=Msa0418210-mRNA-1:cds;Parent=Msa0418210-mRNA-1
chr3_2 CDS 65869486 65869641 65869486 ID=Msa0418210-mRNA-1:cds;Parent=Msa0418210-mRNA-1
chr3_2 CDS 65869723 65869953 65869723 ID=Msa0418210-mRNA-1:cds;Parent=Msa0418210-mRNA-1
chr3_2 CDS 65872954 65873022 65872954 ID=Msa0418210-mRNA-1:cds;Parent=Msa0418210-mRNA-1
chr3_2 three_prime_UTR 65873023 65873895 65873023 ID=Msa0418210-mRNA-1:three_prime_utr;Parent=Msa0418210-mRNA-1
Gene Sequence

>Msa0418210

ATGACGACAATGCTAGAAAGCAACATTTGCAACCACCATTCACATTCTCTTCCCATTTTCTTCAACCCCAATTCCAATCCCAATCCCGGAGGGGGAGGCTTATTTCTCGAACCCTCAATTCCCGATTCCTTTGTTCGTTTCATTTCGTTACGAATTCCTTCATCGGAATCAAATCTTCACCGCCGGCAACGGCGAAGGGTTCCGCCGGTTGGTTGTTTTTTTTTACCGAATAGTACTACTAATCTTCCCGCCGATTCAAAACCGTTTGTATTGCAAAATGGTGAAGATGTTTCTGATAAGGAGTCGGTGTCAAACGGTGTCGTTTTGGATAAAAAGGTTAGGGCTAGAGAACGCGAACTTGTGTTGCACCACTTGAAAGACTTAAGCTGGAATATATTGTTCGTGGTGAGAAGAGGAATATCTTTGAGCTTATTAAGTTTGAGAGGTTTTTGGAAGGGGAACCTTCTAAATATTCTGCGAACCGCTCCGTTCAAAGCTGTTAATTTTAGTGCTTACGACACATATAGAAAACAACTACTTAGATTCTCTGGAAATGAGGAAACTACCAATTTTGAGAGGTTTATTGCTGGTGCTGCTGCTGGGGTTACTGCTACTATTATTTGCCTTCCACTTGATACTATTCGGACCAAGATAGTGGCACCTGGCGGAGAAACTTTGGGTGGTGTAATTGGTGCTTTCCAATACATGATTCAAACTGAAGGCATCTTTTCTCTATACAAGGGTTTAGTACCATCACTTATAAGCATGGCTCCTTCTAGTGCAGTCTTTTATGGTGAACTGAGTGCCTTTGATCAGCTAGAGTTGGGGCCAGTAAGGACATTGTTGCATGGGGCTATTGCTGGTGCATGTGCAGAAGCTGCTACATACCCATTTGAAGTGGTGAGGAGGCAGCTTCAATTGCAAGTCCAGTCTACTAAATTAAGTTCTTTAGCAACTTTTGTCAAAATTGTGGAACAAGGAGGCATTTCAGCCCTCTATGCAGGACTTATTCCCAGCTTATTACAGGTACTTCCTTCAGCATCAATTAGTTACTTTGTGTATGAGTTTATGAAGATTGTTCTCAAAGTAGAGTAG
Protein sequence

>Msa0418210

MTTMLESNICNHHSHSLPIFFNPNSNPNPGGGGLFLEPSIPDSFVRFISLRIPSSESNLHRRQRRRVPPVGCFFLPNSTTNLPADSKPFVLQNGEDVSDKESVSNGVVLDKKVRARERELVLHHLKDLSWNILFVVRRGISLSLLSLRGFWKGNLLNILRTAPFKAVNFSAYDTYRKQLLRFSGNEETTNFERFIAGAAAGVTATIICLPLDTIRTKIVAPGGETLGGVIGAFQYMIQTEGIFSLYKGLVPSLISMAPSSAVFYGELSAFDQLELGPVRTLLHGAIAGACAEAATYPFEVVRRQLQLQVQSTKLSSLATFVKIVEQGGISALYAGLIPSLLQVLPSASISYFVYEFMKIVLKVE*