AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0612730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0612730 MtrunA17_Chr4g0047451 88.061 913 45 8 1 849 1 913 0.0 1610
Msa0612730 MtrunA17_Chr5g0428751 28.698 791 430 24 33 725 43 797 3.85e-66 236
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0612730 AT1G65070.2 50.338 888 324 18 28 849 40 876 0.0 795
Msa0612730 AT1G65070.4 50.230 870 316 18 28 831 40 858 0.0 770
Msa0612730 AT1G65070.1 51.499 767 266 14 28 730 40 764 0.0 709
Msa0612730 AT1G65070.3 52.632 627 199 10 28 596 40 626 0.0 598
Msa0612730 AT5G54090.1 28.643 796 434 29 20 720 34 790 1.74e-62 226

Find 292 sgRNAs with CRISPR-Local

Find 507 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATAATTCATTGGACTTTC+TGG 0.056329 4_2:+61231659 None:intergenic
ATCAATCAAGTGACTAATTT+TGG 0.146698 4_2:-61231516 Msa0612730:three_prime_UTR
CAACAACAACTCGACCTTTC+TGG 0.168663 4_2:-61236487 Msa0612730:CDS
TCTGCTTGCTTATTCTTTAC+AGG 0.179462 4_2:-61231542 Msa0612730:three_prime_UTR
CATAAATAAACAAAAGTTAT+TGG 0.197355 4_2:-61230460 Msa0612730:three_prime_UTR
CTCTGGAGCAACATACTTTA+TGG 0.200265 4_2:-61235179 Msa0612730:CDS
CTCCGCTCTTGCTGCTGTTC+TGG 0.212629 4_2:+61233956 None:intergenic
AAACCTTGCAACCAACTTAT+AGG 0.224407 4_2:-61234087 Msa0612730:CDS
GCAAAATTGTAATTTCCTAA+TGG 0.255352 4_2:-61235470 Msa0612730:CDS
CGAAAAGCAACTAAAAGATT+TGG 0.258652 4_2:-61233251 Msa0612730:CDS
ACATCATATACTCCACAATT+TGG 0.262844 4_2:-61233118 Msa0612730:CDS
TTGTTTGCTGGTATTGTTAC+TGG 0.267337 4_2:-61230512 Msa0612730:three_prime_UTR
CTTGTTCTCATTGATGAAAT+TGG 0.280062 4_2:-61234274 Msa0612730:intron
ATAGTACCTAAACTGAAAAT+TGG 0.281975 4_2:+61234953 None:intergenic
CCAGAAAGTCCAATGAATTA+TGG 0.282003 4_2:-61231659 Msa0612730:CDS
ATCTGATTTGGGCTATTAAT+AGG 0.289526 4_2:+61231227 None:intergenic
GAAGAACACTCGCTGCTTCC+AGG 0.290821 4_2:-61236387 Msa0612730:CDS
CAGCAGCTTGGACCCGCTTT+TGG 0.291662 4_2:-61231577 Msa0612730:three_prime_UTR
TTGCATAGATTGCAATCTTT+TGG 0.292449 4_2:-61235425 Msa0612730:CDS
GTAATAGTGGGAATCTGATT+TGG 0.311339 4_2:+61231215 None:intergenic
GACCTTATCCTTGCAGATAT+TGG 0.312231 4_2:-61234542 Msa0612730:CDS
AGCAATGGTGATATTTATTA+TGG 0.313667 4_2:-61231881 Msa0612730:CDS
CAAAATTGTAATTTCCTAAT+GGG 0.314744 4_2:-61235469 Msa0612730:CDS
TTGCATCCTCTAACTCTTGT+TGG 0.316694 4_2:+61233305 None:intergenic
TTCAAATCTATTGCTTCTTT+CGG 0.318025 4_2:+61235154 None:intergenic
AGGTCAAACCAAGGAAGTTT+TGG 0.325111 4_2:+61234560 None:intergenic
AACCTTGCAACCAACTTATA+GGG 0.326348 4_2:-61234086 Msa0612730:CDS
TCATTAGATCAGAACGAAAA+AGG 0.327607 4_2:-61235369 Msa0612730:CDS
CTTGGCAGGCAGATGCATTC+CGG 0.328681 4_2:+61234589 None:intergenic
AGGTTTGATCGAGAAGCTTT+TGG 0.334460 4_2:+61236530 None:intergenic
AGGGATTGAGGGTTTGTTGA+TGG 0.339868 4_2:+61236735 None:intergenic
TGCTGTTAGCTTATTGCAAT+AGG 0.342564 4_2:+61231595 None:intergenic
TTCTTAGATGTTTGCACCGC+TGG 0.347990 4_2:+61231857 None:intergenic
GATCGACGCTTAGTAATAAA+TGG 0.355822 4_2:+61235274 None:intergenic
GGGATTGAGGGTTTGTTGAT+GGG 0.370731 4_2:+61236736 None:intergenic
GAAAAGCAACTAAAAGATTT+GGG 0.371137 4_2:-61233250 Msa0612730:CDS
AGCATTCACTTCCACTTCAA+TGG 0.372505 4_2:-61236608 Msa0612730:CDS
ATCAGAGATAAAATATTTGT+TGG 0.373046 4_2:-61235044 Msa0612730:CDS
AAGGAGAAGCGAGGGATTGA+GGG 0.374390 4_2:+61236724 None:intergenic
ACGGGCGTTGTTGGCGGCGG+AGG 0.376941 4_2:+61236582 None:intergenic
TCCTTGCAATACGTGGCCTT+TGG 0.378650 4_2:+61230688 None:intergenic
GATGCCCGGCCTGAGCTCAT+TGG 0.380731 4_2:+61230974 None:intergenic
TCTGAGTTGGGTAATGGAAA+TGG 0.381561 4_2:-61234776 Msa0612730:CDS
GAGTACGTCCGACGGGTAAA+CGG 0.383430 4_2:+61236563 None:intergenic
ATTACAAAGAGAACTGAATA+TGG 0.386756 4_2:+61231761 None:intergenic
AACTAGTTCTCCCACTCATC+AGG 0.387558 4_2:-61232939 Msa0612730:CDS
CAAGGTCTTCTGCCTCCCTT+TGG 0.387704 4_2:+61233371 None:intergenic
AGGGTTCTCTGGGGATGTAT+TGG 0.387828 4_2:-61234067 Msa0612730:intron
GTTCTGAATGCCAGCAGCTC+TGG 0.388227 4_2:-61235196 Msa0612730:intron
AACCAACTTATAGGGTTCTC+TGG 0.388468 4_2:-61234078 Msa0612730:CDS
GTAATACATGGGATGGGCAC+TGG 0.389103 4_2:-61231743 Msa0612730:CDS
TTGTAATTTCCTAATGGGCT+TGG 0.389277 4_2:-61235464 Msa0612730:CDS
TTAAGCATAGCGCAATCTAT+TGG 0.392431 4_2:-61234031 Msa0612730:intron
TTCTCCACTCGATGGAATAT+CGG 0.397517 4_2:+61230721 None:intergenic
AATTCTTCTGAGTTGGGTAA+TGG 0.397648 4_2:-61234782 Msa0612730:CDS
TCCTAATGGGCTTGGAGCGC+AGG 0.398236 4_2:-61235456 Msa0612730:CDS
ATCTCCCTAAGCTAAAAGTT+TGG 0.402641 4_2:+61231328 None:intergenic
GAAGGAGAAGCGAGGGATTG+AGG 0.404110 4_2:+61236723 None:intergenic
AATGCTCTATCAGTCATTAC+AGG 0.405453 4_2:-61233930 Msa0612730:CDS
GTTCATAATTTCTGCATGAA+TGG 0.405550 4_2:+61233865 None:intergenic
CAAGTCCGTGTGAAGGGATT+GGG 0.412733 4_2:-61233091 Msa0612730:CDS
GACGGGTAAACGGGCGTTGT+TGG 0.416611 4_2:+61236573 None:intergenic
GTCATCTCAGGACCTAATAC+TGG 0.416951 4_2:-61234665 Msa0612730:CDS
GGCCTAAGTGTACCTGCCTT+TGG 0.418520 4_2:-61230620 Msa0612730:three_prime_UTR
GCTGTTAGCTTATTGCAATA+GGG 0.420312 4_2:+61231596 None:intergenic
GTTGACTTCAAAATTAGATC+TGG 0.420665 4_2:-61234701 Msa0612730:CDS
GGGAGATCATAACAGAGAAT+AGG 0.421502 4_2:-61231285 Msa0612730:three_prime_UTR
TGCTGATCTAAGTACTTTGA+AGG 0.425952 4_2:-61234155 Msa0612730:CDS
TGCTCCAATGAGCTCAGGCC+GGG 0.426132 4_2:-61230978 Msa0612730:three_prime_UTR
TCAGTTCTCTTTGTAATACA+TGG 0.427691 4_2:-61231755 Msa0612730:CDS
ATTTGAACAACATGGAAGTT+AGG 0.428354 4_2:-61235138 Msa0612730:CDS
GGCAGAGCAGACTGTGGCTT+CGG 0.429255 4_2:-61230767 Msa0612730:three_prime_UTR
TAATAGTGGGAATCTGATTT+GGG 0.431781 4_2:+61231216 None:intergenic
TAGAGACCAAAGAAAATGAA+TGG 0.432265 4_2:+61231111 None:intergenic
TAATACATGGGATGGGCACT+GGG 0.432402 4_2:-61231742 Msa0612730:CDS
GTCTGGAAATTCTTCTGAGT+TGG 0.433211 4_2:-61234789 Msa0612730:CDS
GTAGCAGAAGCAAGGTTTGA+AGG 0.434423 4_2:+61236705 None:intergenic
GGAGATCATAACAGAGAATA+GGG 0.434447 4_2:-61231284 Msa0612730:three_prime_UTR
GGTGCAGTGGTGGTCTTGAT+TGG 0.437661 4_2:+61230867 None:intergenic
CTTCGAACGGTGCAAAGCTC+GGG 0.437748 4_2:+61236406 None:intergenic
TCCTGCGCTCCAAGCCCATT+AGG 0.439036 4_2:+61235455 None:intergenic
TCTGGAAATTCTTCTGAGTT+GGG 0.439306 4_2:-61234788 Msa0612730:CDS
GCCTATGCTCAATGGATGAA+TGG 0.441853 4_2:-61234983 Msa0612730:CDS
GCAAGTCCGTGTGAAGGGAT+TGG 0.444020 4_2:-61233092 Msa0612730:CDS
TGAGTGGGAGAACTAGTTGC+AGG 0.444981 4_2:+61232944 None:intergenic
CTCCAATATCTGCAAGGATA+AGG 0.447195 4_2:+61234540 None:intergenic
ACGGGTCCAACAAGAGTTAG+AGG 0.448882 4_2:-61233311 Msa0612730:CDS
TGCTGAGAGTTGCTTGCATA+TGG 0.449310 4_2:+61236627 None:intergenic
CCTATGCTCAATGGATGAAT+GGG 0.451608 4_2:-61234982 Msa0612730:CDS
ACAGTACATCCATAATTCAT+TGG 0.451719 4_2:+61231650 None:intergenic
TATGGCAAAGGAAGCTCAAC+GGG 0.452879 4_2:-61233329 Msa0612730:CDS
GAGCTCATTGGAGCACTCCT+TGG 0.453654 4_2:+61230986 None:intergenic
AGAAAAGTCCAAAACTTCCT+TGG 0.454680 4_2:-61234568 Msa0612730:CDS
GCATTCACTTCCACTTCAAT+GGG 0.457389 4_2:-61236607 Msa0612730:CDS
ACTAGAGTTGTGGTCATCTC+AGG 0.458908 4_2:-61234677 Msa0612730:CDS
AATCCTGGACTCTTTATTGA+AGG 0.459366 4_2:-61235338 Msa0612730:CDS
TAGACGTGAAACGATGCTTA+TGG 0.459950 4_2:-61233347 Msa0612730:CDS
CTTTAATTATTGAATTGAGT+TGG 0.464631 4_2:+61233221 None:intergenic
GTTAAAGGCTCAAGCTGAAA+AGG 0.465641 4_2:-61233894 Msa0612730:CDS
TTCAAACTCTGAAGCGGCCG+AGG 0.466077 4_2:-61235113 Msa0612730:CDS
ACCAACTTATAGGGTTCTCT+GGG 0.467907 4_2:-61234077 Msa0612730:CDS
TTCAATGAAAACGTTGGGCC+TGG 0.468162 4_2:-61234630 Msa0612730:CDS
CTTATTGCAATAGGGGAATG+AGG 0.468243 4_2:+61231604 None:intergenic
ACATACGTAAACACACTTGT+TGG 0.471238 4_2:-61231480 Msa0612730:three_prime_UTR
TTCTCATTCACAATCACCTT+CGG 0.473344 4_2:-61231167 Msa0612730:three_prime_UTR
AGCCACAGTCTGCTCTGCCA+CGG 0.473871 4_2:+61230771 None:intergenic
GGATTGAGGGTTTGTTGATG+GGG 0.474954 4_2:+61236737 None:intergenic
ATGAGGTTCAACGCCGTCTA+CGG 0.477102 4_2:-61231014 Msa0612730:three_prime_UTR
GCAGGATTCTTTGCACTTGG+TGG 0.477236 4_2:+61232962 None:intergenic
AGTACGTCCGACGGGTAAAC+GGG 0.478043 4_2:+61236564 None:intergenic
CCGCAGATATTGTAAGATAC+TGG 0.478412 4_2:+61234213 None:intergenic
GCCACAGTGGTAGAATTGCC+TGG 0.478854 4_2:-61233058 Msa0612730:CDS
GGGTAAACGGGCGTTGTTGG+CGG 0.478868 4_2:+61236576 None:intergenic
CAATGACATTGCGGTCGTGC+AGG 0.479424 4_2:-61234903 Msa0612730:CDS
TAAACGGGCGTTGTTGGCGG+CGG 0.480719 4_2:+61236579 None:intergenic
AGAGGATGCAAAATCTCAAA+TGG 0.483805 4_2:-61233293 Msa0612730:CDS
AATGAATGGGTATATATATG+AGG 0.485166 4_2:+61231125 None:intergenic
ATCTAAGTACTTTGAAGGAA+AGG 0.486923 4_2:-61234150 Msa0612730:CDS
GGGAATAGTCAACAATCTAC+TGG 0.487417 4_2:+61236426 None:intergenic
TCTAAGTACTTTGAAGGAAA+GGG 0.492540 4_2:-61234149 Msa0612730:CDS
GCCACAGTCTGCTCTGCCAC+GGG 0.492659 4_2:+61230772 None:intergenic
ATCAAGACCACCACTGCACC+GGG 0.492880 4_2:-61230864 Msa0612730:three_prime_UTR
GATAATGTCACACTAAGGTC+TGG 0.494415 4_2:-61234806 Msa0612730:CDS
ACTGCTTCAATGAAAACGTT+GGG 0.494465 4_2:-61234635 Msa0612730:CDS
CAAGAGCTGCCTATGCTCAA+TGG 0.496220 4_2:-61234991 Msa0612730:CDS
TCTTCGAACGGTGCAAAGCT+CGG 0.496479 4_2:+61236405 None:intergenic
AAAACACCCACGCCAAAAGC+GGG 0.496954 4_2:+61231565 None:intergenic
CCCTGTGCCCGGTGCAGTGG+TGG 0.497181 4_2:+61230857 None:intergenic
ACCACCACTGCACCGGGCAC+AGG 0.498572 4_2:-61230858 Msa0612730:three_prime_UTR
GTTGCAGGATTCTTTGCACT+TGG 0.499764 4_2:+61232959 None:intergenic
GATGGGGATGAAGAGGTTGC+AGG 0.501851 4_2:+61236753 None:intergenic
CTATTGTAGAAACCACTGAA+TGG 0.501864 4_2:-61231935 Msa0612730:intron
GGCAACGGGAGCCCTGTGCC+CGG 0.503828 4_2:+61230846 None:intergenic
GGTTATTAGCGCCGCAGAGA+AGG 0.503851 4_2:-61230650 Msa0612730:three_prime_UTR
CGATTTAACAGTAAATATTG+AGG 0.507073 4_2:-61234876 Msa0612730:CDS
ACCTGCTTTCCCTGATGAGT+GGG 0.510949 4_2:+61232929 None:intergenic
TCTCTTTGTAATACATGGGA+TGG 0.512107 4_2:-61231750 Msa0612730:CDS
TATGCGGCATCCATTACTCC+TGG 0.512692 4_2:-61234852 Msa0612730:CDS
CGCTGATTGTCATCTCAAGA+TGG 0.514272 4_2:+61231792 None:intergenic
GAACAAGGTGGAACTTATCA+TGG 0.516489 4_2:+61230917 None:intergenic
ACCACTGAATGGAAAATCCC+GGG 0.517125 4_2:-61231924 Msa0612730:CDS
AATCAAGACCACCACTGCAC+CGG 0.519330 4_2:-61230865 Msa0612730:three_prime_UTR
CTGTTAGCTTATTGCAATAG+GGG 0.520724 4_2:+61231597 None:intergenic
ATGCGATCAGCGCCACTGAT+GGG 0.523837 4_2:+61233142 None:intergenic
AACCCTATAAGTTGGTTGCA+AGG 0.524314 4_2:+61234084 None:intergenic
AGGAGTGCTCCAATGAGCTC+AGG 0.524655 4_2:-61230983 Msa0612730:three_prime_UTR
ACAGTGGCTACATTGGCAAC+GGG 0.525007 4_2:+61230832 None:intergenic
GCATCGTTTCACGTCTATCA+AGG 0.526470 4_2:+61233353 None:intergenic
CCACAGTGGTAGAATTGCCT+GGG 0.526487 4_2:-61233057 Msa0612730:CDS
TGTAGCCACTGTCTCGGAAA+CGG 0.526967 4_2:-61230821 Msa0612730:three_prime_UTR
CAAACTATCAAACAATTCCC+TGG 0.528874 4_2:+61236369 None:intergenic
TCCCACTCATCAGGGAAAGC+AGG 0.529174 4_2:-61232930 Msa0612730:intron
GAGCCCTGTGCCCGGTGCAG+TGG 0.530200 4_2:+61230854 None:intergenic
GGAGAATGCAGTTGCGCCAA+AGG 0.530252 4_2:-61230704 Msa0612730:three_prime_UTR
TGTGGCTTCGGCGTGGCAGA+AGG 0.530744 4_2:-61230755 Msa0612730:three_prime_UTR
TTCAGTTTAGGTACTATTGG+AGG 0.531767 4_2:-61234947 Msa0612730:intron
GTTCTGATCTAATGATCTCC+AGG 0.531958 4_2:+61235377 None:intergenic
ACTCAAAATTGCTCTTTCCT+CGG 0.533024 4_2:+61235096 None:intergenic
GTGCTCCAATGAGCTCAGGC+CGG 0.534332 4_2:-61230979 Msa0612730:three_prime_UTR
TGCCAATGTAGCCACTGTCT+CGG 0.535076 4_2:-61230827 Msa0612730:three_prime_UTR
AACCACTGAATGGAAAATCC+CGG 0.535658 4_2:-61231925 Msa0612730:CDS
CTTCCTTCAATAAAGAGTCC+AGG 0.535939 4_2:+61235335 None:intergenic
CAGTTCTCTTTGTAATACAT+GGG 0.538091 4_2:-61231754 Msa0612730:CDS
TCTTCAACGGTCTTGATGCC+CGG 0.538757 4_2:+61230960 None:intergenic
TTCCGAGACAGTGGCTACAT+TGG 0.539624 4_2:+61230825 None:intergenic
CGCCGCAGAGAAGGAACGTA+AGG 0.540264 4_2:-61230641 Msa0612730:three_prime_UTR
CCACCACTGCACCGGGCACA+GGG 0.541687 4_2:-61230857 Msa0612730:three_prime_UTR
GATTTGGGCTATTAATAGGA+AGG 0.544697 4_2:+61231231 None:intergenic
GTTTGTTGATGGGGATGAAG+AGG 0.545453 4_2:+61236746 None:intergenic
TAATTGACCATGCACAAAAG+TGG 0.545555 4_2:-61233994 Msa0612730:CDS
GGATTGGACTGAGTTGGACT+CGG 0.547239 4_2:+61236678 None:intergenic
GGAGAGCAAGTCCGTGTGAA+GGG 0.549755 4_2:-61233097 Msa0612730:CDS
GCTCTTGACAGTTTCTTCAA+CGG 0.549867 4_2:+61230947 None:intergenic
CCCCAGAGAACCCTATAAGT+TGG 0.550494 4_2:+61234076 None:intergenic
AAGGTTTGAAGGAGAAGCGA+GGG 0.550811 4_2:+61236716 None:intergenic
TTGTTGTTGAGGAATGAGTC+TGG 0.550825 4_2:+61236501 None:intergenic
AGAGACCAAAGAAAATGAAT+GGG 0.551146 4_2:+61231112 None:intergenic
TTATTGCAATAGGGGAATGA+GGG 0.552632 4_2:+61231605 None:intergenic
GCTTGCTTATTCTTTACAGG+AGG 0.553481 4_2:-61231539 Msa0612730:three_prime_UTR
CGGACTTGCTCTCCAAATTG+TGG 0.554429 4_2:+61233106 None:intergenic
TGGGGATGATGAAACAATCT+TGG 0.554483 4_2:-61233038 Msa0612730:intron
GTGGTGGTCTTGATTGGTAT+CGG 0.555766 4_2:+61230873 None:intergenic
GTTCATCTCTAAGTTACCCC+GGG 0.556248 4_2:+61231907 None:intergenic
TCTGCGGGAACATGTTAACT+TGG 0.556527 4_2:-61234197 Msa0612730:CDS
GTCTGTTGGAGTACGTCCGA+CGG 0.557543 4_2:+61236555 None:intergenic
AGAGACGACTCCAGGAGTAA+TGG 0.558135 4_2:+61234842 None:intergenic
AAGAACACTCGCTGCTTCCA+GGG 0.558472 4_2:-61236386 Msa0612730:CDS
AACCAGAACAGCAGCAAGAG+CGG 0.560885 4_2:-61233958 Msa0612730:CDS
CTCCTTGGCGTATCCGTAGA+CGG 0.561808 4_2:+61231001 None:intergenic
AGGTTGCAGGTGAGTTGCAT+CGG 0.562147 4_2:+61236766 None:intergenic
GATTTAACAGTAAATATTGA+GGG 0.563255 4_2:-61234875 Msa0612730:CDS
GTGTGGCGGAGAATCTCATC+GGG 0.563668 4_2:+61230895 None:intergenic
GCAATAAGCTAACAGCAGCT+TGG 0.564108 4_2:-61231589 Msa0612730:three_prime_UTR
TGCAGATATTGGAGATCACC+AGG 0.564613 4_2:-61234531 Msa0612730:intron
TCTGTTGGAGTACGTCCGAC+GGG 0.568179 4_2:+61236556 None:intergenic
TGATAGAGCAAGTGAAGACC+TGG 0.568238 4_2:-61235395 Msa0612730:CDS
CTCTTTGTAATACATGGGAT+GGG 0.569356 4_2:-61231749 Msa0612730:CDS
TCAAGTCATGTATTCCAGAA+AGG 0.570215 4_2:+61236473 None:intergenic
AGGTTGCAATTCTGTTGAAG+AGG 0.570911 4_2:-61234927 Msa0612730:CDS
GCATCACTTATGTCAAAAGC+CGG 0.571118 4_2:-61234608 Msa0612730:CDS
CAGTATCTTACAATATCTGC+GGG 0.572845 4_2:-61234212 Msa0612730:CDS
GACAGTGGCTACATTGGCAA+CGG 0.574058 4_2:+61230831 None:intergenic
ATCCTCTCAGTATGCACCAA+AGG 0.574127 4_2:+61230604 None:intergenic
ATAGCCTCAAAACTCTCGAA+TGG 0.578502 4_2:-61236654 Msa0612730:CDS
GTCTCCGATATTCCATCGAG+TGG 0.579004 4_2:-61230725 Msa0612730:three_prime_UTR
AGGAATGAGTCTGGCAGCGG+AGG 0.579503 4_2:+61236510 None:intergenic
TTCCTCCCAATCCCTTCACA+CGG 0.581458 4_2:+61233086 None:intergenic
GTACTTCTCCTTGCAATACG+TGG 0.582192 4_2:+61230681 None:intergenic
GCCACTGATGGGAGAACCAA+CGG 0.582829 4_2:+61233153 None:intergenic
TCTCAGTATGCACCAAAGGC+AGG 0.583262 4_2:+61230608 None:intergenic
AAGATTGTTTCATCATCCCC+AGG 0.584283 4_2:+61233040 None:intergenic
AACTGCTTCAATGAAAACGT+TGG 0.585712 4_2:-61234636 Msa0612730:CDS
TGGAGAGCAAGTCCGTGTGA+AGG 0.586036 4_2:-61233098 Msa0612730:CDS
GGGTATATATATGAGGAAAG+AGG 0.586179 4_2:+61231132 None:intergenic
TTACTTCAAGTGCGAGCCCG+TGG 0.587271 4_2:-61230788 Msa0612730:three_prime_UTR
TGAAACGATGCTTATGGCAA+AGG 0.587621 4_2:-61233341 Msa0612730:CDS
TTAGAGATGAACAGCAGCAA+TGG 0.589819 4_2:-61231896 Msa0612730:CDS
TGTTCATCTCTAAGTTACCC+CGG 0.590270 4_2:+61231906 None:intergenic
GCTATCGGATTGGACTGAGT+TGG 0.590319 4_2:+61236672 None:intergenic
ACTAGTTCTCCCACTCATCA+GGG 0.590763 4_2:-61232938 Msa0612730:CDS
GAAAGGTCGAGTTGTTGTTG+AGG 0.591657 4_2:+61236490 None:intergenic
TTGAGGAATGAGTCTGGCAG+CGG 0.591996 4_2:+61236507 None:intergenic
GCCGTTGGTTCTCCCATCAG+TGG 0.592897 4_2:-61233154 Msa0612730:CDS
TTTCAGATAATGTCACACTA+AGG 0.593354 4_2:-61234811 Msa0612730:CDS
TACCTGCTTTCCCTGATGAG+TGG 0.594282 4_2:+61232928 None:intergenic
GGCGGAGGAGCCCATTGAAG+TGG 0.595273 4_2:+61236597 None:intergenic
AATGCGATCAGCGCCACTGA+TGG 0.596091 4_2:+61233141 None:intergenic
CAACTGCATTCTCCACTCGA+TGG 0.599589 4_2:+61230713 None:intergenic
AATTGACCATGCACAAAAGT+GGG 0.600519 4_2:-61233993 Msa0612730:CDS
GGAGAATCTCATCGGGAACA+AGG 0.601030 4_2:+61230902 None:intergenic
TAGGCTTTCAAACTCTGAAG+CGG 0.601365 4_2:-61235119 Msa0612730:CDS
GAAGGGTGAAGCTAATGAGT+AGG 0.602642 4_2:+61231249 None:intergenic
ATCTCAGGACCTAATACTGG+AGG 0.603222 4_2:-61234662 Msa0612730:CDS
GCCAAAGGCCACGTATTGCA+AGG 0.606843 4_2:-61230689 Msa0612730:three_prime_UTR
ATTTGGGCTATTAATAGGAA+GGG 0.608624 4_2:+61231232 None:intergenic
ACAACTAATAATTCCTCATG+AGG 0.608696 4_2:-61231031 Msa0612730:three_prime_UTR
AGCAATAGATTTGAACAACA+TGG 0.612310 4_2:-61235146 Msa0612730:CDS
GTCCGTGTGAAGGGATTGGG+AGG 0.612668 4_2:-61233088 Msa0612730:CDS
CCAGTATCTTACAATATCTG+CGG 0.612724 4_2:-61234213 Msa0612730:CDS
AGCAGACTGTGGCTTCGGCG+TGG 0.612873 4_2:-61230762 Msa0612730:three_prime_UTR
TCGGTTGAGTAGCAGAAGCA+AGG 0.613416 4_2:+61236697 None:intergenic
CGCTGCCGTTTCCGAGACAG+TGG 0.613874 4_2:+61230816 None:intergenic
GGATCTACGAGGTATGCGAC+TGG 0.616506 4_2:-61231828 Msa0612730:CDS
GCTTCTAAAAGCGCGTCACA+AGG 0.619119 4_2:-61234746 Msa0612730:CDS
CGCCGTCTACGGATACGCCA+AGG 0.620888 4_2:-61231003 Msa0612730:three_prime_UTR
AACAACGCCCGTTTACCCGT+CGG 0.621448 4_2:-61236571 Msa0612730:CDS
GGTGTGGCGGAGAATCTCAT+CGG 0.623115 4_2:+61230894 None:intergenic
CCCATTCATCCATTGAGCAT+AGG 0.623957 4_2:+61234982 None:intergenic
AAAGCTCATACTCCTGCCGT+TGG 0.625973 4_2:-61233169 Msa0612730:CDS
CAGTAAATATTGAGGGTATG+CGG 0.626418 4_2:-61234868 Msa0612730:CDS
GCATACTGAGAGGATAGCTA+AGG 0.626753 4_2:-61230596 Msa0612730:three_prime_UTR
TTATGGCAAAGGAAGCTCAA+CGG 0.627066 4_2:-61233330 Msa0612730:CDS
TTTGCTGGGTGAAAAGAACA+AGG 0.627244 4_2:-61231058 Msa0612730:three_prime_UTR
GCCCGTGGCAGAGCAGACTG+TGG 0.630848 4_2:-61230773 Msa0612730:three_prime_UTR
CAAGGTTTGAAGGAGAAGCG+AGG 0.631968 4_2:+61236715 None:intergenic
CACCAAAGGCAGGTACACTT+AGG 0.633721 4_2:+61230618 None:intergenic
AGACGGCGTTGAACCTCATG+AGG 0.634152 4_2:+61231018 None:intergenic
GAGGAGAACAAACGTACCGA+AGG 0.636718 4_2:+61231151 None:intergenic
TAGATCTGGAACTAGAGTTG+TGG 0.640587 4_2:-61234687 Msa0612730:CDS
AGCAGCGAGTGTTCTTCGAA+CGG 0.642225 4_2:+61236393 None:intergenic
CTGATGGGAGAACCAACGGC+AGG 0.643450 4_2:+61233157 None:intergenic
GGTGATCTCCAATATCTGCA+AGG 0.644964 4_2:+61234534 None:intergenic
CTTGATTGGTATCGGTGTGG+CGG 0.647869 4_2:+61230881 None:intergenic
TTCCAGTGAAAATTCCATTG+CGG 0.649211 4_2:+61234108 None:intergenic
CAATCTACTGGAAACAGCAA+CGG 0.653406 4_2:+61236438 None:intergenic
TGACCATGCACAAAAGTGGG+TGG 0.654188 4_2:-61233990 Msa0612730:CDS
GGGTAATGGAAATGGAACAA+TGG 0.655085 4_2:-61234768 Msa0612730:CDS
GAACAGCAGCAAGAGCGGAG+AGG 0.655853 4_2:-61233953 Msa0612730:CDS
TGCCTTTGGTGCATACTGAG+AGG 0.660122 4_2:-61230606 Msa0612730:three_prime_UTR
GCAAACATCTAAGAATACTG+TGG 0.660918 4_2:-61231849 Msa0612730:CDS
CAAGGAGAAGTACAATGCAA+CGG 0.662072 4_2:-61230671 Msa0612730:three_prime_UTR
GCTCTATCAGTCATTACAGG+AGG 0.665919 4_2:-61233927 Msa0612730:CDS
TGAAGAAACTGTCAAGAGCG+TGG 0.667370 4_2:-61230943 Msa0612730:three_prime_UTR
TCTCAGGACCTAATACTGGA+GGG 0.667789 4_2:-61234661 Msa0612730:CDS
CTGTCTCGGAAACGGCAGCG+AGG 0.672084 4_2:-61230813 Msa0612730:three_prime_UTR
ACTTAGATCAGCATAATGAG+TGG 0.681388 4_2:+61234165 None:intergenic
GGCCTTACGTTCCTTCTCTG+CGG 0.682119 4_2:+61230639 None:intergenic
CTATGCTCAATGGATGAATG+GGG 0.683732 4_2:-61234981 Msa0612730:CDS
GGTCTTGATTGGTATCGGTG+TGG 0.686331 4_2:+61230878 None:intergenic
CACAGTGGTAGAATTGCCTG+GGG 0.691114 4_2:-61233056 Msa0612730:CDS
TGATATTTATTATGGTCCAG+CGG 0.693969 4_2:-61231873 Msa0612730:CDS
AATTATGAACGTGTACTCTG+AGG 0.698166 4_2:-61233852 Msa0612730:intron
AATACATGGGATGGGCACTG+GGG 0.701367 4_2:-61231741 Msa0612730:CDS
GAATCTCATCGGGAACAAGG+TGG 0.702623 4_2:+61230905 None:intergenic
TGAAGAGGACAATGACATTG+CGG 0.707528 4_2:-61234912 Msa0612730:CDS
CCCAGGCAATTCTACCACTG+TGG 0.714085 4_2:+61233057 None:intergenic
GGGAGGAAAATTAGCCACAG+TGG 0.714859 4_2:-61233071 Msa0612730:CDS
GCAAGGATAAGGTCAAACCA+AGG 0.720894 4_2:+61234551 None:intergenic
CCACTGAATGGAAAATCCCG+GGG 0.744139 4_2:-61231923 Msa0612730:CDS
AAGAATACTGTGGATCTACG+AGG 0.748281 4_2:-61231839 Msa0612730:CDS
GGTTCAAAATGAGTGACACG+AGG 0.753470 4_2:+61231680 None:intergenic
CCAACTTATAGGGTTCTCTG+GGG 0.797932 4_2:-61234076 Msa0612730:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATCATG+TGG - chr4_2:61232795-61232814 Msa0612730:intron 10.0%
!!! AATTTAGAATTGATATATTT+TGG - chr4_2:61234726-61234745 Msa0612730:CDS 10.0%
!! AACAATGTTTAAAAAAATAA+AGG + chr4_2:61236691-61236710 None:intergenic 10.0%
!! ATAATGATTATCATACTATA+TGG + chr4_2:61233457-61233476 None:intergenic 15.0%
!!! ATTTCAGATAAACTTTAAAA+GGG + chr4_2:61233483-61233502 None:intergenic 15.0%
!! AATTTCAGATAAACTTTAAA+AGG + chr4_2:61233484-61233503 None:intergenic 15.0%
!! ATATAAGTAAAAGAAGTTAT+TGG - chr4_2:61234626-61234645 Msa0612730:CDS 15.0%
!!! AAGGTATTTTATATTTAATC+TGG - chr4_2:61234673-61234692 Msa0612730:CDS 15.0%
!!! TTACTATTTTAGTAAGAATT+GGG - chr4_2:61234843-61234862 Msa0612730:CDS 15.0%
!!! TTACTATTTTAGTAAGAATT+GGG - chr4_2:61234843-61234862 Msa0612730:CDS 15.0%
!!! AATTTTGTCTAAATCAAATT+AGG + chr4_2:61235146-61235165 None:intergenic 15.0%
!!! TTTTGTTTATTTATGAACAA+AGG + chr4_2:61236753-61236772 None:intergenic 15.0%
!! CATAAATAAACAAAAGTTAT+TGG - chr4_2:61236758-61236777 Msa0612730:CDS 15.0%
!! AAATAAAAGGAAACAGTTTA+TGG - chr4_2:61231105-61231124 Msa0612730:three_prime_UTR 20.0%
!! AATAAAAGGAAACAGTTTAT+GGG - chr4_2:61231106-61231125 Msa0612730:three_prime_UTR 20.0%
!! CAGATTATGAAAAGAAAAAA+AGG + chr4_2:61231476-61231495 None:intergenic 20.0%
!!! TTTTACTTTGGATTTGTAAA+AGG + chr4_2:61231662-61231681 None:intergenic 20.0%
!!! ATTTTTGTGAACTTTTACTT+TGG + chr4_2:61231674-61231693 None:intergenic 20.0%
!!! TGATGCAATTGTTTTTAATT+AGG - chr4_2:61231702-61231721 Msa0612730:CDS 20.0%
!! CAAAATTGTAATTTCCTAAT+GGG - chr4_2:61231749-61231768 Msa0612730:CDS 20.0%
!! ATCAGAGATAAAATATTTGT+TGG - chr4_2:61232174-61232193 Msa0612730:intron 20.0%
!! GATTTAACAGTAAATATTGA+GGG - chr4_2:61232343-61232362 Msa0612730:intron 20.0%
!! ATATTTAAATTAACAGCTCT+TGG + chr4_2:61233634-61233653 None:intergenic 20.0%
!! CTTTAATTATTGAATTGAGT+TGG + chr4_2:61234000-61234019 None:intergenic 20.0%
!! TTGCAAAATAACTTTCTTAA+TGG + chr4_2:61234406-61234425 None:intergenic 20.0%
!!! CTTATTATATTTGAAACTAG+AGG + chr4_2:61234493-61234512 None:intergenic 20.0%
!!! ATTATCTAAAATATTCTTCG+TGG - chr4_2:61234592-61234611 Msa0612730:CDS 20.0%
!! AAATACCTTTCAATAAAATG+TGG + chr4_2:61234662-61234681 None:intergenic 20.0%
!!! CATTTTTTCTTTTGAAGTAA+TGG - chr4_2:61234696-61234715 Msa0612730:CDS 20.0%
!!! GTTACTATTTTAGTAAGAAT+TGG - chr4_2:61234842-61234861 Msa0612730:CDS 20.0%
!!! TACTATTTTAGTAAGAATTG+GGG - chr4_2:61234844-61234863 Msa0612730:CDS 20.0%
!!! GTTACTATTTTAGTAAGAAT+TGG - chr4_2:61234842-61234861 Msa0612730:CDS 20.0%
!!! TACTATTTTAGTAAGAATTG+GGG - chr4_2:61234844-61234863 Msa0612730:CDS 20.0%
!!! TTAAGAAGCCAATTTTAAAA+AGG + chr4_2:61235123-61235142 None:intergenic 20.0%
!!! AAAAAGTATCAACAAAACAA+AGG + chr4_2:61235847-61235866 None:intergenic 20.0%
!!! TGTTTTGTTGATACTTTTTA+TGG - chr4_2:61235848-61235867 Msa0612730:intron 20.0%
!!! ATTTTTAGAAGAGTAATAGT+GGG + chr4_2:61236018-61236037 None:intergenic 20.0%
!!! TATTTTTAGAAGAGTAATAG+TGG + chr4_2:61236019-61236038 None:intergenic 20.0%
!!! TATTTTCTTATCTTTTTTGC+TGG - chr4_2:61236145-61236164 Msa0612730:intron 20.0%
!!! ATTTTCTTATCTTTTTTGCT+GGG - chr4_2:61236146-61236165 Msa0612730:intron 20.0%
!!! TTTTTTTAAACATTGTTTGC+TGG - chr4_2:61236694-61236713 Msa0612730:CDS 20.0%
!! TCAATAGTTTAAGACATGTT+TGG - chr4_2:61230935-61230954 Msa0612730:three_prime_UTR 25.0%
! TTTCAGACATTTCTAATTGA+TGG - chr4_2:61231220-61231239 Msa0612730:three_prime_UTR 25.0%
!! GTATTTTTCTTGACAAAGTT+CGG - chr4_2:61231541-61231560 Msa0612730:three_prime_UTR 25.0%
!! ATTTTGCAGTATTTCAAGAA+GGG + chr4_2:61231735-61231754 None:intergenic 25.0%
!! AATTTTGCAGTATTTCAAGA+AGG + chr4_2:61231736-61231755 None:intergenic 25.0%
! GCAAAATTGTAATTTCCTAA+TGG - chr4_2:61231748-61231767 Msa0612730:CDS 25.0%
!!! AAGTATCGTCTCAAATTTTT+CGG - chr4_2:61231903-61231922 Msa0612730:CDS 25.0%
! TTCAAATCTATTGCTTCTTT+CGG + chr4_2:61232067-61232086 None:intergenic 25.0%
! ATAGTACCTAAACTGAAAAT+TGG + chr4_2:61232268-61232287 None:intergenic 25.0%
!! ATTTTCAGTTTAGGTACTAT+TGG - chr4_2:61232268-61232287 Msa0612730:intron 25.0%
! CGATTTAACAGTAAATATTG+AGG - chr4_2:61232342-61232361 Msa0612730:intron 25.0%
! AAAAAAGTTCAGATATTACC+TGG + chr4_2:61232708-61232727 None:intergenic 25.0%
!! AAAATCTCTCAACTTTTAGT+GGG - chr4_2:61232873-61232892 Msa0612730:intron 25.0%
! TTATTATAGTTTCTTCTCCT+TGG - chr4_2:61233430-61233449 Msa0612730:intron 25.0%
! ATTAATAGATATCCAATCCT+CGG - chr4_2:61233602-61233621 Msa0612730:intron 25.0%
!! TAACGGCATTATGAAAATTT+TGG + chr4_2:61233673-61233692 None:intergenic 25.0%
! GAAAAGCAACTAAAAGATTT+GGG - chr4_2:61233968-61233987 Msa0612730:CDS 25.0%
! TTAATATAGTTAACCTGTCA+AGG - chr4_2:61234356-61234375 Msa0612730:CDS 25.0%
!! GAAATCCACATTTTATTGAA+AGG - chr4_2:61234654-61234673 Msa0612730:CDS 25.0%
! ATCCAAAAAAGTCTATGTTT+GGG + chr4_2:61234755-61234774 None:intergenic 25.0%
! TATCCAAAAAAGTCTATGTT+TGG + chr4_2:61234756-61234775 None:intergenic 25.0%
!! TTTTTGGATATATCCAATAG+CGG - chr4_2:61234766-61234785 Msa0612730:CDS 25.0%
! AAATAGTAACAAATACTCTC+CGG + chr4_2:61234832-61234851 None:intergenic 25.0%
! GTTGTTCTATCATGTAATTT+GGG - chr4_2:61234888-61234907 Msa0612730:CDS 25.0%
! AAATAGTAACAAATACTCTC+CGG + chr4_2:61234832-61234851 None:intergenic 25.0%
! GTTGTTCTATCATGTAATTT+GGG - chr4_2:61234888-61234907 Msa0612730:CDS 25.0%
! GGTATTTATTACAGAAAAAC+AGG + chr4_2:61235008-61235027 None:intergenic 25.0%
!! GTTTTTCTGTAATAAATACC+AGG - chr4_2:61235008-61235027 Msa0612730:CDS 25.0%
! CAATTTCCAAATATGATGTT+AGG + chr4_2:61235036-61235055 None:intergenic 25.0%
! CTAACATCATATTTGGAAAT+TGG - chr4_2:61235034-61235053 Msa0612730:CDS 25.0%
! TTCAGATCATCCTATAATAT+AGG - chr4_2:61235060-61235079 Msa0612730:CDS 25.0%
! ATTCAATGTGCCTATATTAT+AGG + chr4_2:61235073-61235092 None:intergenic 25.0%
!!! ATCTGTCTCCTTTTTAAAAT+TGG - chr4_2:61235112-61235131 Msa0612730:CDS 25.0%
! AGCAATGGTGATATTTATTA+TGG - chr4_2:61235337-61235356 Msa0612730:CDS 25.0%
! ATTACAAAGAGAACTGAATA+TGG + chr4_2:61235460-61235479 None:intergenic 25.0%
!! ATCAATCAAGTGACTAATTT+TGG - chr4_2:61235702-61235721 Msa0612730:intron 25.0%
! AATGAATGGGTATATATATG+AGG + chr4_2:61236096-61236115 None:intergenic 25.0%
!! ATATACCCATTCATTTTCTT+TGG - chr4_2:61236101-61236120 Msa0612730:intron 25.0%
! GTTTGATAGTTTGAAACACT+TGG - chr4_2:61230859-61230878 Msa0612730:three_prime_UTR 30.0%
ACTTATTTGAGCTAATCTAC+CGG + chr4_2:61231249-61231268 None:intergenic 30.0%
ACTATTACTTAGCGTATGTT+TGG + chr4_2:61231276-61231295 None:intergenic 30.0%
AGAAATTCTCTAAGCAATCA+AGG + chr4_2:61231340-61231359 None:intergenic 30.0%
TTGCTTAGAGAATTTCTGTA+TGG - chr4_2:61231343-61231362 Msa0612730:three_prime_UTR 30.0%
! ATCAACGTTTTTGATGTCTA+TGG - chr4_2:61231408-61231427 Msa0612730:three_prime_UTR 30.0%
! TCAACGTTTTTGATGTCTAT+GGG - chr4_2:61231409-61231428 Msa0612730:three_prime_UTR 30.0%
!!! CACTCTTTTAAGACCTTATT+GGG + chr4_2:61231594-61231613 None:intergenic 30.0%
!!! ACACTCTTTTAAGACCTTAT+TGG + chr4_2:61231595-61231614 None:intergenic 30.0%
! TTTTGCAGTATTTCAAGAAG+GGG + chr4_2:61231734-61231753 None:intergenic 30.0%
! TTGCATAGATTGCAATCTTT+TGG - chr4_2:61231793-61231812 Msa0612730:CDS 30.0%
TCATTAGATCAGAACGAAAA+AGG - chr4_2:61231849-61231868 Msa0612730:CDS 30.0%
AAAAAGGAACATAGAAATCC+TGG - chr4_2:61231865-61231884 Msa0612730:CDS 30.0%
! AGTATCGTCTCAAATTTTTC+GGG - chr4_2:61231904-61231923 Msa0612730:CDS 30.0%
AGCAATAGATTTGAACAACA+TGG - chr4_2:61232072-61232091 Msa0612730:intron 30.0%
ATTTGAACAACATGGAAGTT+AGG - chr4_2:61232080-61232099 Msa0612730:intron 30.0%
! GTATGTCCAATTTTCAGTTT+AGG - chr4_2:61232259-61232278 Msa0612730:intron 30.0%
TTTCAGATAATGTCACACTA+AGG - chr4_2:61232407-61232426 Msa0612730:intron 30.0%
!!! GATCTAATTTTGAAGTCAAC+TGG + chr4_2:61232517-61232536 None:intergenic 30.0%
! GTTGACTTCAAAATTAGATC+TGG - chr4_2:61232517-61232536 Msa0612730:intron 30.0%
! AGTTGAGAGATTTTGTTCAA+GGG + chr4_2:61232867-61232886 None:intergenic 30.0%
! AAGTTGAGAGATTTTGTTCA+AGG + chr4_2:61232868-61232887 None:intergenic 30.0%
! CAAAATCTCTCAACTTTTAG+TGG - chr4_2:61232872-61232891 Msa0612730:intron 30.0%
CTTGTTCTCATTGATGAAAT+TGG - chr4_2:61232944-61232963 Msa0612730:CDS 30.0%
! ATCTAAGTACTTTGAAGGAA+AGG - chr4_2:61233068-61233087 Msa0612730:CDS 30.0%
! TCTAAGTACTTTGAAGGAAA+GGG - chr4_2:61233069-61233088 Msa0612730:CDS 30.0%
CATTACAGGAGGAAAAAAAT+CGG - chr4_2:61233302-61233321 Msa0612730:CDS 30.0%
GTTCATAATTTCTGCATGAA+TGG + chr4_2:61233356-61233375 None:intergenic 30.0%
TTATCATACTATATGGACCA+AGG + chr4_2:61233450-61233469 None:intergenic 30.0%
GGATTGGATATCTATTAATG+AGG + chr4_2:61233601-61233620 None:intergenic 30.0%
TTAATAGATATCCAATCCTC+GGG - chr4_2:61233603-61233622 Msa0612730:intron 30.0%
! ATGAAAATTTTGGATGGAAG+AGG + chr4_2:61233663-61233682 None:intergenic 30.0%
! GGCATTATGAAAATTTTGGA+TGG + chr4_2:61233669-61233688 None:intergenic 30.0%
! TTTCATAATGCCGTTATTTC+TGG - chr4_2:61233677-61233696 Msa0612730:intron 30.0%
!! TTCATAATGCCGTTATTTCT+GGG - chr4_2:61233678-61233697 Msa0612730:intron 30.0%
GATCTTTGCAAAAGAAGAAA+AGG + chr4_2:61233828-61233847 None:intergenic 30.0%
! TTCTTTTGCAAAGATCCAAA+GGG - chr4_2:61233832-61233851 Msa0612730:intron 30.0%
CGAAAAGCAACTAAAAGATT+TGG - chr4_2:61233967-61233986 Msa0612730:CDS 30.0%
ACATCATATACTCCACAATT+TGG - chr4_2:61234100-61234119 Msa0612730:CDS 30.0%
AGTAATCTTATCTAGTGAGT+TGG - chr4_2:61234428-61234447 Msa0612730:intron 30.0%
GTAATCTTATCTAGTGAGTT+GGG - chr4_2:61234429-61234448 Msa0612730:intron 30.0%
TCCAAAAAAGTCTATGTTTG+GGG + chr4_2:61234754-61234773 None:intergenic 30.0%
AATTACATGATAGAACAACG+AGG + chr4_2:61234887-61234906 None:intergenic 30.0%
CGTTGTTCTATCATGTAATT+TGG - chr4_2:61234887-61234906 Msa0612730:CDS 30.0%
AATTACATGATAGAACAACG+AGG + chr4_2:61234887-61234906 None:intergenic 30.0%
CGTTGTTCTATCATGTAATT+TGG - chr4_2:61234887-61234906 Msa0612730:CDS 30.0%
TGATATTTATTATGGTCCAG+CGG - chr4_2:61235345-61235364 Msa0612730:CDS 30.0%
TCAGTTCTCTTTGTAATACA+TGG - chr4_2:61235463-61235482 Msa0612730:CDS 30.0%
CAGTTCTCTTTGTAATACAT+GGG - chr4_2:61235464-61235483 Msa0612730:CDS 30.0%
ACAGTACATCCATAATTCAT+TGG + chr4_2:61235571-61235590 None:intergenic 30.0%
!!! ATTTGCCAAACTTTTAGCTT+AGG - chr4_2:61235885-61235904 Msa0612730:intron 30.0%
!!! TTTGCCAAACTTTTAGCTTA+GGG - chr4_2:61235886-61235905 Msa0612730:intron 30.0%
!!! TCATACCAAACTTTTAGCTT+AGG - chr4_2:61235912-61235931 Msa0612730:intron 30.0%
!!! CATACCAAACTTTTAGCTTA+GGG - chr4_2:61235913-61235932 Msa0612730:intron 30.0%
TAATGAGTAGGCAAAAACAA+CGG + chr4_2:61235960-61235979 None:intergenic 30.0%
ATTTGGGCTATTAATAGGAA+GGG + chr4_2:61235989-61236008 None:intergenic 30.0%
!! ATCTGATTTGGGCTATTAAT+AGG + chr4_2:61235994-61236013 None:intergenic 30.0%
! TAATAGTGGGAATCTGATTT+GGG + chr4_2:61236005-61236024 None:intergenic 30.0%
AGAGACCAAAGAAAATGAAT+GGG + chr4_2:61236109-61236128 None:intergenic 30.0%
TAGAGACCAAAGAAAATGAA+TGG + chr4_2:61236110-61236129 None:intergenic 30.0%
ACAACTAATAATTCCTCATG+AGG - chr4_2:61236187-61236206 Msa0612730:intron 30.0%
TCAAGTCATGTATTCCAGAA+AGG + chr4_2:61230748-61230767 None:intergenic 35.0%
CAAACTATCAAACAATTCCC+TGG + chr4_2:61230852-61230871 None:intergenic 35.0%
CTGTATCTAATCATTCACAC+AGG - chr4_2:61230885-61230904 Msa0612730:three_prime_UTR 35.0%
TTTATTTCCATCATCTCTCG+AGG + chr4_2:61231092-61231111 None:intergenic 35.0%
!! CGAGAGATGATGGAAATAAA+AGG - chr4_2:61231092-61231111 Msa0612730:three_prime_UTR 35.0%
! GAAAGTGATGGAAACTGATT+GGG + chr4_2:61231167-61231186 None:intergenic 35.0%
! TGAAAGTGATGGAAACTGAT+TGG + chr4_2:61231168-61231187 None:intergenic 35.0%
!! ATAGCTCTATTGCTATTTCG+CGG + chr4_2:61231201-61231220 None:intergenic 35.0%
! CATTTCTAATTGATGGCTAC+CGG - chr4_2:61231227-61231246 Msa0612730:three_prime_UTR 35.0%
! AGCAGCTTCTTTTATGCATT+TGG - chr4_2:61231508-61231527 Msa0612730:three_prime_UTR 35.0%
! GCAGCTTCTTTTATGCATTT+GGG - chr4_2:61231509-61231528 Msa0612730:three_prime_UTR 35.0%
! TTCTTTTATGCATTTGGGCT+AGG - chr4_2:61231514-61231533 Msa0612730:three_prime_UTR 35.0%
CATAATGTCATGTCCCAATA+AGG - chr4_2:61231578-61231597 Msa0612730:three_prime_UTR 35.0%
! TCTAATTGCACTTGTGCTTT+TGG - chr4_2:61231624-61231643 Msa0612730:exon 35.0%
! CTAATTGCACTTGTGCTTTT+GGG - chr4_2:61231625-61231644 Msa0612730:exon 35.0%
!! TTGTAATTTCCTAATGGGCT+TGG - chr4_2:61231754-61231773 Msa0612730:CDS 35.0%
AATCCTGGACTCTTTATTGA+AGG - chr4_2:61231880-61231899 Msa0612730:CDS 35.0%
GATCGACGCTTAGTAATAAA+TGG + chr4_2:61231947-61231966 None:intergenic 35.0%
TATAGGTATTTGCTTCCAGA+AGG - chr4_2:61231995-61232014 Msa0612730:intron 35.0%
ACTCAAAATTGCTCTTTCCT+CGG + chr4_2:61232125-61232144 None:intergenic 35.0%
TTCAGTTTAGGTACTATTGG+AGG - chr4_2:61232271-61232290 Msa0612730:intron 35.0%
! CAGTAAATATTGAGGGTATG+CGG - chr4_2:61232350-61232369 Msa0612730:intron 35.0%
TCTGGAAATTCTTCTGAGTT+GGG - chr4_2:61232430-61232449 Msa0612730:intron 35.0%
! AATTCTTCTGAGTTGGGTAA+TGG - chr4_2:61232436-61232455 Msa0612730:intron 35.0%
AACTGCTTCAATGAAAACGT+TGG - chr4_2:61232582-61232601 Msa0612730:intron 35.0%
ACTGCTTCAATGAAAACGTT+GGG - chr4_2:61232583-61232602 Msa0612730:intron 35.0%
!!! AGGAAGTTTTGGACTTTTCT+TGG + chr4_2:61232650-61232669 None:intergenic 35.0%
AGAAAAGTCCAAAACTTCCT+TGG - chr4_2:61232650-61232669 Msa0612730:intron 35.0%
!! TATCCGTAAGTTTTTGGAAG+TGG - chr4_2:61232907-61232926 Msa0612730:intron 35.0%
!! GAGAACAAGTGATTGTTTTG+AGG + chr4_2:61232933-61232952 None:intergenic 35.0%
CTCATTGATGAAATTGGTAG+TGG - chr4_2:61232950-61232969 Msa0612730:CDS 35.0%
CCAGTATCTTACAATATCTG+CGG - chr4_2:61233005-61233024 Msa0612730:CDS 35.0%
CAGTATCTTACAATATCTGC+GGG - chr4_2:61233006-61233025 Msa0612730:CDS 35.0%
ACTTAGATCAGCATAATGAG+TGG + chr4_2:61233056-61233075 None:intergenic 35.0%
TGCTGATCTAAGTACTTTGA+AGG - chr4_2:61233063-61233082 Msa0612730:CDS 35.0%
!!! ATGTTTTGAAAATGCCGCAA+TGG - chr4_2:61233096-61233115 Msa0612730:CDS 35.0%
TTCCAGTGAAAATTCCATTG+CGG + chr4_2:61233113-61233132 None:intergenic 35.0%
AAACCTTGCAACCAACTTAT+AGG - chr4_2:61233131-61233150 Msa0612730:CDS 35.0%
AACCTTGCAACCAACTTATA+GGG - chr4_2:61233132-61233151 Msa0612730:CDS 35.0%
TTAAGCATAGCGCAATCTAT+TGG - chr4_2:61233187-61233206 Msa0612730:CDS 35.0%
TAATTGACCATGCACAAAAG+TGG - chr4_2:61233224-61233243 Msa0612730:CDS 35.0%
AATTGACCATGCACAAAAGT+GGG - chr4_2:61233225-61233244 Msa0612730:CDS 35.0%
AATGCTCTATCAGTCATTAC+AGG - chr4_2:61233288-61233307 Msa0612730:CDS 35.0%
GGAGGAAAAAAATCGGTTAA+AGG - chr4_2:61233309-61233328 Msa0612730:CDS 35.0%
AATTATGAACGTGTACTCTG+AGG - chr4_2:61233366-61233385 Msa0612730:CDS 35.0%
ACCAGAAAATCAAAGTGTGA+TGG - chr4_2:61233537-61233556 Msa0612730:intron 35.0%
!! TCCATCACACTTTGATTTTC+TGG + chr4_2:61233541-61233560 None:intergenic 35.0%
GGATATCTATTAATGAGGCA+CGG + chr4_2:61233596-61233615 None:intergenic 35.0%
TAATAGATATCCAATCCTCG+GGG - chr4_2:61233604-61233623 Msa0612730:intron 35.0%
!! TCATAATGCCGTTATTTCTG+GGG - chr4_2:61233679-61233698 Msa0612730:intron 35.0%
! ACCATTTTCCCCAGAAATAA+CGG + chr4_2:61233690-61233709 None:intergenic 35.0%
GAAGAAAAGGAAAAGAGTGA+GGG + chr4_2:61233815-61233834 None:intergenic 35.0%
AGAAGAAAAGGAAAAGAGTG+AGG + chr4_2:61233816-61233835 None:intergenic 35.0%
! CTTCTTTTGCAAAGATCCAA+AGG - chr4_2:61233831-61233850 Msa0612730:intron 35.0%
AGAGGATGCAAAATCTCAAA+TGG - chr4_2:61233925-61233944 Msa0612730:CDS 35.0%
! AGTATGAGCTTTTACAATGG+AGG + chr4_2:61234041-61234060 None:intergenic 35.0%
!! AGGAGTATGAGCTTTTACAA+TGG + chr4_2:61234044-61234063 None:intergenic 35.0%
GAAACAATCTTGGTACAGTA+TGG - chr4_2:61234190-61234209 Msa0612730:CDS 35.0%
!!! TCCCCAAACATAGACTTTTT+TGG - chr4_2:61234750-61234769 Msa0612730:CDS 35.0%
GGAGTATGTAAATAGCTAGA+GGG - chr4_2:61234791-61234810 Msa0612730:CDS 35.0%
GAGTATGTAAATAGCTAGAG+GGG - chr4_2:61234792-61234811 Msa0612730:CDS 35.0%
TATCATGTAATTTGGGTGAC+CGG - chr4_2:61234895-61234914 Msa0612730:CDS 35.0%
CAAATATGATGTTAGGAACC+TGG + chr4_2:61235029-61235048 None:intergenic 35.0%
CAGGTTCCTAACATCATATT+TGG - chr4_2:61235027-61235046 Msa0612730:CDS 35.0%
CTATTGTAGAAACCACTGAA+TGG - chr4_2:61235283-61235302 Msa0612730:CDS 35.0%
GCAAACATCTAAGAATACTG+TGG - chr4_2:61235369-61235388 Msa0612730:CDS 35.0%
TCTCTTTGTAATACATGGGA+TGG - chr4_2:61235468-61235487 Msa0612730:CDS 35.0%
CTCTTTGTAATACATGGGAT+GGG - chr4_2:61235469-61235488 Msa0612730:CDS 35.0%
CCATAATTCATTGGACTTTC+TGG + chr4_2:61235562-61235581 None:intergenic 35.0%
CCAGAAAGTCCAATGAATTA+TGG - chr4_2:61235559-61235578 Msa0612730:intron 35.0%
TTATTGCAATAGGGGAATGA+GGG + chr4_2:61235616-61235635 None:intergenic 35.0%
! CTGTTAGCTTATTGCAATAG+GGG + chr4_2:61235624-61235643 None:intergenic 35.0%
! GCTGTTAGCTTATTGCAATA+GGG + chr4_2:61235625-61235644 None:intergenic 35.0%
! TGCTGTTAGCTTATTGCAAT+AGG + chr4_2:61235626-61235645 None:intergenic 35.0%
TCTGCTTGCTTATTCTTTAC+AGG - chr4_2:61235676-61235695 Msa0612730:intron 35.0%
ACATACGTAAACACACTTGT+TGG - chr4_2:61235738-61235757 Msa0612730:intron 35.0%
ATCTCCCTAAGCTAAAAGTT+TGG + chr4_2:61235893-61235912 None:intergenic 35.0%
ATCTCCCTAAGCTAAAAGTT+TGG + chr4_2:61235893-61235912 None:intergenic 35.0%
GGAGATCATAACAGAGAATA+GGG - chr4_2:61235934-61235953 Msa0612730:intron 35.0%
GATTTGGGCTATTAATAGGA+AGG + chr4_2:61235990-61236009 None:intergenic 35.0%
! GTAATAGTGGGAATCTGATT+TGG + chr4_2:61236006-61236025 None:intergenic 35.0%
TTCTCATTCACAATCACCTT+CGG - chr4_2:61236051-61236070 Msa0612730:intron 35.0%
GGGTATATATATGAGGAAAG+AGG + chr4_2:61236089-61236108 None:intergenic 35.0%
! TTGTTTGCTGGTATTGTTAC+TGG - chr4_2:61236706-61236725 Msa0612730:CDS 35.0%
!!! TTCGAGAGTTTTGAGGCTAT+CGG + chr4_2:61230564-61230583 None:intergenic 40.0%
ATAGCCTCAAAACTCTCGAA+TGG - chr4_2:61230564-61230583 Msa0612730:three_prime_UTR 40.0%
! AGTTCCATTCGAGAGTTTTG+AGG + chr4_2:61230571-61230590 None:intergenic 40.0%
AGCATTCACTTCCACTTCAA+TGG - chr4_2:61230610-61230629 Msa0612730:three_prime_UTR 40.0%
GCATTCACTTCCACTTCAAT+GGG - chr4_2:61230611-61230630 Msa0612730:three_prime_UTR 40.0%
! AGGTTTGATCGAGAAGCTTT+TGG + chr4_2:61230691-61230710 None:intergenic 40.0%
! TTGTTGTTGAGGAATGAGTC+TGG + chr4_2:61230720-61230739 None:intergenic 40.0%
CAATCTACTGGAAACAGCAA+CGG + chr4_2:61230783-61230802 None:intergenic 40.0%
GGGAATAGTCAACAATCTAC+TGG + chr4_2:61230795-61230814 None:intergenic 40.0%
CATTCACACAGGTTTGAACT+TGG - chr4_2:61230896-61230915 Msa0612730:three_prime_UTR 40.0%
GGGCAATCTAATGAAAGTGA+TGG + chr4_2:61231179-61231198 None:intergenic 40.0%
!! TAGCTCTATTGCTATTTCGC+GGG + chr4_2:61231200-61231219 None:intergenic 40.0%
GCAATCAAGGAATCATGCAT+TGG + chr4_2:61231327-61231346 None:intergenic 40.0%
! GTTGATGTCGTTTAGAACCT+TGG + chr4_2:61231394-61231413 None:intergenic 40.0%
GTTCTGATCTAATGATCTCC+AGG + chr4_2:61231844-61231863 None:intergenic 40.0%
CTTCCTTCAATAAAGAGTCC+AGG + chr4_2:61231886-61231905 None:intergenic 40.0%
GCATTCAGAACTATACCTTC+TGG + chr4_2:61232013-61232032 None:intergenic 40.0%
!! CTCTGGAGCAACATACTTTA+TGG - chr4_2:61232039-61232058 Msa0612730:intron 40.0%
! TAGGCTTTCAAACTCTGAAG+CGG - chr4_2:61232099-61232118 Msa0612730:intron 40.0%
CCTATGCTCAATGGATGAAT+GGG - chr4_2:61232236-61232255 Msa0612730:intron 40.0%
CTATGCTCAATGGATGAATG+GGG - chr4_2:61232237-61232256 Msa0612730:intron 40.0%
AGGTTGCAATTCTGTTGAAG+AGG - chr4_2:61232291-61232310 Msa0612730:intron 40.0%
TGAAGAGGACAATGACATTG+CGG - chr4_2:61232306-61232325 Msa0612730:intron 40.0%
GATAATGTCACACTAAGGTC+TGG - chr4_2:61232412-61232431 Msa0612730:intron 40.0%
GTCTGGAAATTCTTCTGAGT+TGG - chr4_2:61232429-61232448 Msa0612730:intron 40.0%
!! TCTGAGTTGGGTAATGGAAA+TGG - chr4_2:61232442-61232461 Msa0612730:intron 40.0%
!! GGGTAATGGAAATGGAACAA+TGG - chr4_2:61232450-61232469 Msa0612730:intron 40.0%
!!! TTTTGAAGTCAACTGGCACA+GGG + chr4_2:61232510-61232529 None:intergenic 40.0%
!!! ATTTTGAAGTCAACTGGCAC+AGG + chr4_2:61232511-61232530 None:intergenic 40.0%
! TAGATCTGGAACTAGAGTTG+TGG - chr4_2:61232531-61232550 Msa0612730:intron 40.0%
! CTTTTGACATAAGTGATGCC+AGG + chr4_2:61232609-61232628 None:intergenic 40.0%
GCATCACTTATGTCAAAAGC+CGG - chr4_2:61232610-61232629 Msa0612730:intron 40.0%
!!! AGTTTTGGACTTTTCTTGGC+AGG + chr4_2:61232646-61232665 None:intergenic 40.0%
! AGGTCAAACCAAGGAAGTTT+TGG + chr4_2:61232661-61232680 None:intergenic 40.0%
GACCTTATCCTTGCAGATAT+TGG - chr4_2:61232676-61232695 Msa0612730:intron 40.0%
CTCCAATATCTGCAAGGATA+AGG + chr4_2:61232681-61232700 None:intergenic 40.0%
!! AAGGGACTGCAATTTTGAAG+GGG + chr4_2:61232849-61232868 None:intergenic 40.0%
! CAAGGGACTGCAATTTTGAA+GGG + chr4_2:61232850-61232869 None:intergenic 40.0%
! TCAAGGGACTGCAATTTTGA+AGG + chr4_2:61232851-61232870 None:intergenic 40.0%
! CTCACGTATCCGTAAGTTTT+TGG - chr4_2:61232901-61232920 Msa0612730:intron 40.0%
AGGCCACTTCCAAAAACTTA+CGG + chr4_2:61232913-61232932 None:intergenic 40.0%
CCGCAGATATTGTAAGATAC+TGG + chr4_2:61233008-61233027 None:intergenic 40.0%
!! AACCCTATAAGTTGGTTGCA+AGG + chr4_2:61233137-61233156 None:intergenic 40.0%
AACCAACTTATAGGGTTCTC+TGG - chr4_2:61233140-61233159 Msa0612730:CDS 40.0%
ACCAACTTATAGGGTTCTCT+GGG - chr4_2:61233141-61233160 Msa0612730:CDS 40.0%
GTTAAAGGCTCAAGCTGAAA+AGG - chr4_2:61233324-61233343 Msa0612730:CDS 40.0%
!! AAGTGTGATGGATGTTGTGA+AGG - chr4_2:61233549-61233568 Msa0612730:intron 40.0%
GACATTCAATTACAGACTGC+AGG + chr4_2:61233739-61233758 None:intergenic 40.0%
CTCATTGCTTTGCACTTTCT+TGG - chr4_2:61233775-61233794 Msa0612730:intron 40.0%
! TTTTGCAAAGATCCAAAGGG+AGG - chr4_2:61233835-61233854 Msa0612730:intron 40.0%
TAGACGTGAAACGATGCTTA+TGG - chr4_2:61233871-61233890 Msa0612730:CDS 40.0%
TGAAACGATGCTTATGGCAA+AGG - chr4_2:61233877-61233896 Msa0612730:CDS 40.0%
TTATGGCAAAGGAAGCTCAA+CGG - chr4_2:61233888-61233907 Msa0612730:CDS 40.0%
TTGCATCCTCTAACTCTTGT+TGG + chr4_2:61233916-61233935 None:intergenic 40.0%
AAGATTGTTTCATCATCCCC+AGG + chr4_2:61234181-61234200 None:intergenic 40.0%
TGGGGATGATGAAACAATCT+TGG - chr4_2:61234180-61234199 Msa0612730:CDS 40.0%
! ACTCTGTTTTCTTCCTTGAC+AGG + chr4_2:61234372-61234391 None:intergenic 40.0%
TGTCAAGGAAGAAAACAGAG+TGG - chr4_2:61234371-61234390 Msa0612730:intron 40.0%
TTGGGATAAGACAGTTAGAG+AGG - chr4_2:61234457-61234476 Msa0612730:intron 40.0%
GATAAGACAGTTAGAGAGGA+AGG - chr4_2:61234461-61234480 Msa0612730:intron 40.0%
TTGGATATATCCAATAGCGG+AGG - chr4_2:61234769-61234788 Msa0612730:CDS 40.0%
! TGGATATATCCAATAGCGGA+GGG - chr4_2:61234770-61234789 Msa0612730:CDS 40.0%
! GGGAGTATGTAAATAGCTAG+AGG - chr4_2:61234790-61234809 Msa0612730:CDS 40.0%
TTAGTAAGAATTGGGGCATG+TGG - chr4_2:61234851-61234870 Msa0612730:CDS 40.0%
TTAGTAAGAATTGGGGCATG+TGG - chr4_2:61234851-61234870 Msa0612730:CDS 40.0%
ACATTCAAGACCCAACAGAT+GGG + chr4_2:61235177-61235196 None:intergenic 40.0%
AACATTCAAGACCCAACAGA+TGG + chr4_2:61235178-61235197 None:intergenic 40.0%
TCTGTACACTAACGCTTTGA+AGG - chr4_2:61235208-61235227 Msa0612730:intron 40.0%
AACCACTGAATGGAAAATCC+CGG - chr4_2:61235293-61235312 Msa0612730:CDS 40.0%
TGTTCATCTCTAAGTTACCC+CGG + chr4_2:61235315-61235334 None:intergenic 40.0%
TTAGAGATGAACAGCAGCAA+TGG - chr4_2:61235322-61235341 Msa0612730:CDS 40.0%
AAGAATACTGTGGATCTACG+AGG - chr4_2:61235379-61235398 Msa0612730:CDS 40.0%
CTTATTGCAATAGGGGAATG+AGG + chr4_2:61235617-61235636 None:intergenic 40.0%
GCTTGCTTATTCTTTACAGG+AGG - chr4_2:61235679-61235698 Msa0612730:intron 40.0%
GGGAGATCATAACAGAGAAT+AGG - chr4_2:61235933-61235952 Msa0612730:intron 40.0%
TTTGCTGGGTGAAAAGAACA+AGG - chr4_2:61236160-61236179 Msa0612730:intron 40.0%
GCTCTTGACAGTTTCTTCAA+CGG + chr4_2:61236274-61236293 None:intergenic 40.0%
GAACAAGGTGGAACTTATCA+TGG + chr4_2:61236304-61236323 None:intergenic 40.0%
TTCTCCACTCGATGGAATAT+CGG + chr4_2:61236500-61236519 None:intergenic 40.0%
! CAAGGAGAAGTACAATGCAA+CGG - chr4_2:61236547-61236566 Msa0612730:intron 40.0%
! GTTTGTTGATGGGGATGAAG+AGG + chr4_2:61230475-61230494 None:intergenic 45.0%
!! GGATTGAGGGTTTGTTGATG+GGG + chr4_2:61230484-61230503 None:intergenic 45.0%
!! GGGATTGAGGGTTTGTTGAT+GGG + chr4_2:61230485-61230504 None:intergenic 45.0%
!! AGGGATTGAGGGTTTGTTGA+TGG + chr4_2:61230486-61230505 None:intergenic 45.0%
AAGGTTTGAAGGAGAAGCGA+GGG + chr4_2:61230505-61230524 None:intergenic 45.0%
GTAGCAGAAGCAAGGTTTGA+AGG + chr4_2:61230516-61230535 None:intergenic 45.0%
!!! GAGTTTTGAGGCTATCGGAT+TGG + chr4_2:61230559-61230578 None:intergenic 45.0%
TGCTGAGAGTTGCTTGCATA+TGG + chr4_2:61230594-61230613 None:intergenic 45.0%
!! AGAAGCTTTTGGCTGTCTGT+TGG + chr4_2:61230680-61230699 None:intergenic 45.0%
! GAAAGGTCGAGTTGTTGTTG+AGG + chr4_2:61230731-61230750 None:intergenic 45.0%
CAACAACAACTCGACCTTTC+TGG - chr4_2:61230731-61230750 Msa0612730:three_prime_UTR 45.0%
AAGCTATCCTCGAGAGATGA+TGG - chr4_2:61231082-61231101 Msa0612730:three_prime_UTR 45.0%
TGATGGAAACTGATTGGGAG+AGG + chr4_2:61231162-61231181 None:intergenic 45.0%
!! AGCTCTATTGCTATTTCGCG+GGG + chr4_2:61231199-61231218 None:intergenic 45.0%
TGATAGAGCAAGTGAAGACC+TGG - chr4_2:61231823-61231842 Msa0612730:CDS 45.0%
!!! TCGTCTCAAATTTTTCGGGC+TGG - chr4_2:61231908-61231927 Msa0612730:CDS 45.0%
!!! CGTCTCAAATTTTTCGGGCT+GGG - chr4_2:61231909-61231928 Msa0612730:CDS 45.0%
!!! GTCTCAAATTTTTCGGGCTG+GGG - chr4_2:61231910-61231929 Msa0612730:CDS 45.0%
!!! TCTCAAATTTTTCGGGCTGG+GGG - chr4_2:61231911-61231930 Msa0612730:CDS 45.0%
GCCTATGCTCAATGGATGAA+TGG - chr4_2:61232235-61232254 Msa0612730:intron 45.0%
CCCATTCATCCATTGAGCAT+AGG + chr4_2:61232239-61232258 None:intergenic 45.0%
!! TGTTTTCTAGAGACGACTCC+AGG + chr4_2:61232387-61232406 None:intergenic 45.0%
ACTAGAGTTGTGGTCATCTC+AGG - chr4_2:61232541-61232560 Msa0612730:intron 45.0%
GTCATCTCAGGACCTAATAC+TGG - chr4_2:61232553-61232572 Msa0612730:intron 45.0%
ATCTCAGGACCTAATACTGG+AGG - chr4_2:61232556-61232575 Msa0612730:intron 45.0%
TCTCAGGACCTAATACTGGA+GGG - chr4_2:61232557-61232576 Msa0612730:intron 45.0%
! GCAGTTTTCCCTCCAGTATT+AGG + chr4_2:61232568-61232587 None:intergenic 45.0%
TTCAATGAAAACGTTGGGCC+TGG - chr4_2:61232588-61232607 Msa0612730:intron 45.0%
GCAAGGATAAGGTCAAACCA+AGG + chr4_2:61232670-61232689 None:intergenic 45.0%
GGTGATCTCCAATATCTGCA+AGG + chr4_2:61232687-61232706 None:intergenic 45.0%
TGCAGATATTGGAGATCACC+AGG - chr4_2:61232687-61232706 Msa0612730:intron 45.0%
AGTGGAACTGATCCTTCAGA+AGG - chr4_2:61232968-61232987 Msa0612730:CDS 45.0%
AACTGATCCTTCAGAAGGTG+TGG - chr4_2:61232973-61232992 Msa0612730:CDS 45.0%
TCTGCGGGAACATGTTAACT+TGG - chr4_2:61233021-61233040 Msa0612730:intron 45.0%
! TGCCGCAATGGAATTTTCAC+TGG - chr4_2:61233108-61233127 Msa0612730:CDS 45.0%
CCAACTTATAGGGTTCTCTG+GGG - chr4_2:61233142-61233161 Msa0612730:CDS 45.0%
GCTCTATCAGTCATTACAGG+AGG - chr4_2:61233291-61233310 Msa0612730:CDS 45.0%
!! GCCGTTATTTCTGGGGAAAA+TGG - chr4_2:61233686-61233705 Msa0612730:intron 45.0%
AAGGAAAAGAGTGAGGGAGA+CGG + chr4_2:61233809-61233828 None:intergenic 45.0%
GCATCGTTTCACGTCTATCA+AGG + chr4_2:61233868-61233887 None:intergenic 45.0%
TATGGCAAAGGAAGCTCAAC+GGG - chr4_2:61233889-61233908 Msa0612730:CDS 45.0%
GTTGCAGGATTCTTTGCACT+TGG + chr4_2:61234262-61234281 None:intergenic 45.0%
! AACTAGTTCTCCCACTCATC+AGG - chr4_2:61234279-61234298 Msa0612730:CDS 45.0%
! ACTAGTTCTCCCACTCATCA+GGG - chr4_2:61234280-61234299 Msa0612730:CDS 45.0%
TTACATACTCCCTCCGCTAT+TGG + chr4_2:61234782-61234801 None:intergenic 45.0%
AAATAGCTAGAGGGGTTGAG+AGG - chr4_2:61234800-61234819 Msa0612730:CDS 45.0%
AATAGCTAGAGGGGTTGAGA+GGG - chr4_2:61234801-61234820 Msa0612730:CDS 45.0%
ACCACTGAATGGAAAATCCC+GGG - chr4_2:61235294-61235313 Msa0612730:CDS 45.0%
GTTCATCTCTAAGTTACCCC+GGG + chr4_2:61235314-61235333 None:intergenic 45.0%
TTCTTAGATGTTTGCACCGC+TGG + chr4_2:61235364-61235383 None:intergenic 45.0%
! CGCTGATTGTCATCTCAAGA+TGG + chr4_2:61235429-61235448 None:intergenic 45.0%
TAATACATGGGATGGGCACT+GGG - chr4_2:61235476-61235495 Msa0612730:CDS 45.0%
GGTTCAAAATGAGTGACACG+AGG + chr4_2:61235541-61235560 None:intergenic 45.0%
GCAATAAGCTAACAGCAGCT+TGG - chr4_2:61235629-61235648 Msa0612730:intron 45.0%
AAAAACACCCACGCCAAAAG+CGG + chr4_2:61235657-61235676 None:intergenic 45.0%
GAAGGGTGAAGCTAATGAGT+AGG + chr4_2:61235972-61235991 None:intergenic 45.0%
TGAAGAAACTGTCAAGAGCG+TGG - chr4_2:61236275-61236294 Msa0612730:intron 45.0%
! GTGGTGGTCTTGATTGGTAT+CGG + chr4_2:61236348-61236367 None:intergenic 45.0%
GTACTTCTCCTTGCAATACG+TGG + chr4_2:61236540-61236559 None:intergenic 45.0%
ATCCTCTCAGTATGCACCAA+AGG + chr4_2:61236617-61236636 None:intergenic 45.0%
GCATACTGAGAGGATAGCTA+AGG - chr4_2:61236622-61236641 Msa0612730:CDS 45.0%
AAGGAGAAGCGAGGGATTGA+GGG + chr4_2:61230497-61230516 None:intergenic 50.0%
CAAGGTTTGAAGGAGAAGCG+AGG + chr4_2:61230506-61230525 None:intergenic 50.0%
TCGGTTGAGTAGCAGAAGCA+AGG + chr4_2:61230524-61230543 None:intergenic 50.0%
! GGATTGGACTGAGTTGGACT+CGG + chr4_2:61230543-61230562 None:intergenic 50.0%
! GCTATCGGATTGGACTGAGT+TGG + chr4_2:61230549-61230568 None:intergenic 50.0%
TTGAGGAATGAGTCTGGCAG+CGG + chr4_2:61230714-61230733 None:intergenic 50.0%
TCTTCGAACGGTGCAAAGCT+CGG + chr4_2:61230816-61230835 None:intergenic 50.0%
AGCAGCGAGTGTTCTTCGAA+CGG + chr4_2:61230828-61230847 None:intergenic 50.0%
AAGAACACTCGCTGCTTCCA+GGG - chr4_2:61230832-61230851 Msa0612730:three_prime_UTR 50.0%
TTCGATAAGCTGTGCGACCA+AGG - chr4_2:61231374-61231393 Msa0612730:three_prime_UTR 50.0%
! CGTCGATCTAGAATGTGCGT+GGG - chr4_2:61231959-61231978 Msa0612730:intron 50.0%
TAGAATGTGCGTGGGCATCA+GGG - chr4_2:61231967-61231986 Msa0612730:intron 50.0%
CAAGAGCTGCCTATGCTCAA+TGG - chr4_2:61232227-61232246 Msa0612730:intron 50.0%
TATGCGGCATCCATTACTCC+TGG - chr4_2:61232366-61232385 Msa0612730:intron 50.0%
AGAGACGACTCCAGGAGTAA+TGG + chr4_2:61232379-61232398 None:intergenic 50.0%
! GCTTCTAAAAGCGCGTCACA+AGG - chr4_2:61232472-61232491 Msa0612730:intron 50.0%
GAAAGAGCCACACCTTCTGA+AGG + chr4_2:61232983-61233002 None:intergenic 50.0%
CCCCAGAGAACCCTATAAGT+TGG + chr4_2:61233145-61233164 None:intergenic 50.0%
! AGGGTTCTCTGGGGATGTAT+TGG - chr4_2:61233151-61233170 Msa0612730:CDS 50.0%
TGACCATGCACAAAAGTGGG+TGG - chr4_2:61233228-61233247 Msa0612730:CDS 50.0%
!! TCTCCACCCACTTTTGTGCA+TGG + chr4_2:61233234-61233253 None:intergenic 50.0%
AACCAGAACAGCAGCAAGAG+CGG - chr4_2:61233260-61233279 Msa0612730:intron 50.0%
ACGGGTCCAACAAGAGTTAG+AGG - chr4_2:61233907-61233926 Msa0612730:CDS 50.0%
AAAGCTCATACTCCTGCCGT+TGG - chr4_2:61234049-61234068 Msa0612730:intron 50.0%
! CGGACTTGCTCTCCAAATTG+TGG + chr4_2:61234115-61234134 None:intergenic 50.0%
CAAGTCCGTGTGAAGGGATT+GGG - chr4_2:61234127-61234146 Msa0612730:CDS 50.0%
TTCCTCCCAATCCCTTCACA+CGG + chr4_2:61234135-61234154 None:intergenic 50.0%
GGGAGGAAAATTAGCCACAG+TGG - chr4_2:61234147-61234166 Msa0612730:CDS 50.0%
CCACAGTGGTAGAATTGCCT+GGG - chr4_2:61234161-61234180 Msa0612730:CDS 50.0%
CACAGTGGTAGAATTGCCTG+GGG - chr4_2:61234162-61234181 Msa0612730:CDS 50.0%
GCAGGATTCTTTGCACTTGG+TGG + chr4_2:61234259-61234278 None:intergenic 50.0%
TGAGTGGGAGAACTAGTTGC+AGG + chr4_2:61234277-61234296 None:intergenic 50.0%
ACCTGCTTTCCCTGATGAGT+GGG + chr4_2:61234292-61234311 None:intergenic 50.0%
TACCTGCTTTCCCTGATGAG+TGG + chr4_2:61234293-61234312 None:intergenic 50.0%
ATTTGCACCTGCCCATCTGT+TGG - chr4_2:61235163-61235182 Msa0612730:CDS 50.0%
TTTGCACCTGCCCATCTGTT+GGG - chr4_2:61235164-61235183 Msa0612730:CDS 50.0%
CCACTGAATGGAAAATCCCG+GGG - chr4_2:61235295-61235314 Msa0612730:CDS 50.0%
GTAATACATGGGATGGGCAC+TGG - chr4_2:61235475-61235494 Msa0612730:CDS 50.0%
! AATACATGGGATGGGCACTG+GGG - chr4_2:61235477-61235496 Msa0612730:CDS 50.0%
AAAACACCCACGCCAAAAGC+GGG + chr4_2:61235656-61235675 None:intergenic 50.0%
GAGGAGAACAAACGTACCGA+AGG + chr4_2:61236070-61236089 None:intergenic 50.0%
ATGAGGTTCAACGCCGTCTA+CGG - chr4_2:61236204-61236223 Msa0612730:intron 50.0%
TCTTCAACGGTCTTGATGCC+CGG + chr4_2:61236261-61236280 None:intergenic 50.0%
GAATCTCATCGGGAACAAGG+TGG + chr4_2:61236316-61236335 None:intergenic 50.0%
GGAGAATCTCATCGGGAACA+AGG + chr4_2:61236319-61236338 None:intergenic 50.0%
!! CTTGATTGGTATCGGTGTGG+CGG + chr4_2:61236340-61236359 None:intergenic 50.0%
!! GGTCTTGATTGGTATCGGTG+TGG + chr4_2:61236343-61236362 None:intergenic 50.0%
AATCAAGACCACCACTGCAC+CGG - chr4_2:61236353-61236372 Msa0612730:intron 50.0%
ACAGTGGCTACATTGGCAAC+GGG + chr4_2:61236389-61236408 None:intergenic 50.0%
GACAGTGGCTACATTGGCAA+CGG + chr4_2:61236390-61236409 None:intergenic 50.0%
TGCCAATGTAGCCACTGTCT+CGG - chr4_2:61236391-61236410 Msa0612730:CDS 50.0%
TTCCGAGACAGTGGCTACAT+TGG + chr4_2:61236396-61236415 None:intergenic 50.0%
TGTAGCCACTGTCTCGGAAA+CGG - chr4_2:61236397-61236416 Msa0612730:CDS 50.0%
GTCTCCGATATTCCATCGAG+TGG - chr4_2:61236493-61236512 Msa0612730:CDS 50.0%
CAACTGCATTCTCCACTCGA+TGG + chr4_2:61236508-61236527 None:intergenic 50.0%
TCCTTGCAATACGTGGCCTT+TGG + chr4_2:61236533-61236552 None:intergenic 50.0%
CACCAAAGGCAGGTACACTT+AGG + chr4_2:61236603-61236622 None:intergenic 50.0%
TCTCAGTATGCACCAAAGGC+AGG + chr4_2:61236613-61236632 None:intergenic 50.0%
! TGCCTTTGGTGCATACTGAG+AGG - chr4_2:61236612-61236631 Msa0612730:CDS 50.0%
GATGGGGATGAAGAGGTTGC+AGG + chr4_2:61230468-61230487 None:intergenic 55.0%
GAAGGAGAAGCGAGGGATTG+AGG + chr4_2:61230498-61230517 None:intergenic 55.0%
AACAACGCCCGTTTACCCGT+CGG - chr4_2:61230647-61230666 Msa0612730:three_prime_UTR 55.0%
AGTACGTCCGACGGGTAAAC+GGG + chr4_2:61230657-61230676 None:intergenic 55.0%
GAGTACGTCCGACGGGTAAA+CGG + chr4_2:61230658-61230677 None:intergenic 55.0%
TCTGTTGGAGTACGTCCGAC+GGG + chr4_2:61230665-61230684 None:intergenic 55.0%
GTCTGTTGGAGTACGTCCGA+CGG + chr4_2:61230666-61230685 None:intergenic 55.0%
CTTCGAACGGTGCAAAGCTC+GGG + chr4_2:61230815-61230834 None:intergenic 55.0%
GAAGAACACTCGCTGCTTCC+AGG - chr4_2:61230831-61230850 Msa0612730:three_prime_UTR 55.0%
! GCGTCGATCTAGAATGTGCG+TGG - chr4_2:61231958-61231977 Msa0612730:intron 55.0%
CTAGAATGTGCGTGGGCATC+AGG - chr4_2:61231966-61231985 Msa0612730:intron 55.0%
TGGGCATCAGGGCTTCGTAT+AGG - chr4_2:61231978-61231997 Msa0612730:intron 55.0%
! GTTCTGAATGCCAGCAGCTC+TGG - chr4_2:61232022-61232041 Msa0612730:intron 55.0%
GTATGTTGCTCCAGAGCTGC+TGG + chr4_2:61232035-61232054 None:intergenic 55.0%
!! TTCAAACTCTGAAGCGGCCG+AGG - chr4_2:61232105-61232124 Msa0612730:intron 55.0%
CAATGACATTGCGGTCGTGC+AGG - chr4_2:61232315-61232334 Msa0612730:intron 55.0%
CTTGGCAGGCAGATGCATTC+CGG + chr4_2:61232632-61232651 None:intergenic 55.0%
TGAGGCACGGCATGATGTGT+TGG + chr4_2:61233583-61233602 None:intergenic 55.0%
TCTTGGCTATCCCCGAGGAT+TGG + chr4_2:61233617-61233636 None:intergenic 55.0%
GAGTGAGGGAGACGGATAGA+CGG + chr4_2:61233801-61233820 None:intergenic 55.0%
CAAGGTCTTCTGCCTCCCTT+TGG + chr4_2:61233850-61233869 None:intergenic 55.0%
GCCACTGATGGGAGAACCAA+CGG + chr4_2:61234068-61234087 None:intergenic 55.0%
ATGCGATCAGCGCCACTGAT+GGG + chr4_2:61234079-61234098 None:intergenic 55.0%
AATGCGATCAGCGCCACTGA+TGG + chr4_2:61234080-61234099 None:intergenic 55.0%
TGGAGAGCAAGTCCGTGTGA+AGG - chr4_2:61234120-61234139 Msa0612730:CDS 55.0%
GGAGAGCAAGTCCGTGTGAA+GGG - chr4_2:61234121-61234140 Msa0612730:CDS 55.0%
GCAAGTCCGTGTGAAGGGAT+TGG - chr4_2:61234126-61234145 Msa0612730:CDS 55.0%
GCCACAGTGGTAGAATTGCC+TGG - chr4_2:61234160-61234179 Msa0612730:CDS 55.0%
CCCAGGCAATTCTACCACTG+TGG + chr4_2:61234164-61234183 None:intergenic 55.0%
TCCCACTCATCAGGGAAAGC+AGG - chr4_2:61234288-61234307 Msa0612730:CDS 55.0%
TCAAGACCCAACAGATGGGC+AGG + chr4_2:61235173-61235192 None:intergenic 55.0%
! CCCCGGGATTTTCCATTCAG+TGG + chr4_2:61235298-61235317 None:intergenic 55.0%
GGATCTACGAGGTATGCGAC+TGG - chr4_2:61235390-61235409 Msa0612730:CDS 55.0%
! AGACGGCGTTGAACCTCATG+AGG + chr4_2:61236203-61236222 None:intergenic 55.0%
CTCCTTGGCGTATCCGTAGA+CGG + chr4_2:61236220-61236239 None:intergenic 55.0%
! GAGCTCATTGGAGCACTCCT+TGG + chr4_2:61236235-61236254 None:intergenic 55.0%
!! AGGAGTGCTCCAATGAGCTC+AGG - chr4_2:61236235-61236254 Msa0612730:intron 55.0%
! GTGTGGCGGAGAATCTCATC+GGG + chr4_2:61236326-61236345 None:intergenic 55.0%
! GGTGTGGCGGAGAATCTCAT+CGG + chr4_2:61236327-61236346 None:intergenic 55.0%
! GGTGCAGTGGTGGTCTTGAT+TGG + chr4_2:61236354-61236373 None:intergenic 55.0%
ATCAAGACCACCACTGCACC+GGG - chr4_2:61236354-61236373 Msa0612730:intron 55.0%
TTACTTCAAGTGCGAGCCCG+TGG - chr4_2:61236430-61236449 Msa0612730:CDS 55.0%
GGAGAATGCAGTTGCGCCAA+AGG - chr4_2:61236514-61236533 Msa0612730:CDS 55.0%
GCCAAAGGCCACGTATTGCA+AGG - chr4_2:61236529-61236548 Msa0612730:CDS 55.0%
GGTTATTAGCGCCGCAGAGA+AGG - chr4_2:61236568-61236587 Msa0612730:intron 55.0%
GGCCTTACGTTCCTTCTCTG+CGG + chr4_2:61236582-61236601 None:intergenic 55.0%
GGCCTAAGTGTACCTGCCTT+TGG - chr4_2:61236598-61236617 Msa0612730:CDS 55.0%
! TAAACGGGCGTTGTTGGCGG+CGG + chr4_2:61230642-61230661 None:intergenic 60.0%
! GGGTAAACGGGCGTTGTTGG+CGG + chr4_2:61230645-61230664 None:intergenic 60.0%
! GACGGGTAAACGGGCGTTGT+TGG + chr4_2:61230648-61230667 None:intergenic 60.0%
AGGAATGAGTCTGGCAGCGG+AGG + chr4_2:61230711-61230730 None:intergenic 60.0%
!! TCCTAATGGGCTTGGAGCGC+AGG - chr4_2:61231762-61231781 Msa0612730:CDS 60.0%
TCCTGCGCTCCAAGCCCATT+AGG + chr4_2:61231766-61231785 None:intergenic 60.0%
CTCCGCTCTTGCTGCTGTTC+TGG + chr4_2:61233265-61233284 None:intergenic 60.0%
GAACAGCAGCAAGAGCGGAG+AGG - chr4_2:61233265-61233284 Msa0612730:intron 60.0%
ACAGCTCTTGGCTATCCCCG+AGG + chr4_2:61233622-61233641 None:intergenic 60.0%
CTGATGGGAGAACCAACGGC+AGG + chr4_2:61234064-61234083 None:intergenic 60.0%
!! GCCGTTGGTTCTCCCATCAG+TGG - chr4_2:61234064-61234083 Msa0612730:intron 60.0%
GTCCGTGTGAAGGGATTGGG+AGG - chr4_2:61234130-61234149 Msa0612730:CDS 60.0%
AGGGGTTGAGAGGGAGAGAC+CGG - chr4_2:61234810-61234829 Msa0612730:CDS 60.0%
! CAGCAGCTTGGACCCGCTTT+TGG - chr4_2:61235641-61235660 Msa0612730:intron 60.0%
!! CTTGGACCCGCTTTTGGCGT+GGG - chr4_2:61235647-61235666 Msa0612730:intron 60.0%
GTGCTCCAATGAGCTCAGGC+CGG - chr4_2:61236239-61236258 Msa0612730:intron 60.0%
TGCTCCAATGAGCTCAGGCC+GGG - chr4_2:61236240-61236259 Msa0612730:intron 60.0%
AGCCACAGTCTGCTCTGCCA+CGG + chr4_2:61236450-61236469 None:intergenic 60.0%
GGCAGAGCAGACTGTGGCTT+CGG - chr4_2:61236451-61236470 Msa0612730:CDS 60.0%
CGCCGCAGAGAAGGAACGTA+AGG - chr4_2:61236577-61236596 Msa0612730:CDS 60.0%
GGCGGAGGAGCCCATTGAAG+TGG + chr4_2:61230624-61230643 None:intergenic 65.0%
!! GCTTGGACCCGCTTTTGGCG+TGG - chr4_2:61235646-61235665 Msa0612730:intron 65.0%
CGCCGTCTACGGATACGCCA+AGG - chr4_2:61236215-61236234 Msa0612730:intron 65.0%
GATGCCCGGCCTGAGCTCAT+TGG + chr4_2:61236247-61236266 None:intergenic 65.0%
! CGCTGCCGTTTCCGAGACAG+TGG + chr4_2:61236405-61236424 None:intergenic 65.0%
CTGTCTCGGAAACGGCAGCG+AGG - chr4_2:61236405-61236424 Msa0612730:CDS 65.0%
GCCACAGTCTGCTCTGCCAC+GGG + chr4_2:61236449-61236468 None:intergenic 65.0%
AGCAGACTGTGGCTTCGGCG+TGG - chr4_2:61236456-61236475 Msa0612730:CDS 65.0%
TGTGGCTTCGGCGTGGCAGA+AGG - chr4_2:61236463-61236482 Msa0612730:CDS 65.0%
ACCACCACTGCACCGGGCAC+AGG - chr4_2:61236360-61236379 Msa0612730:intron 70.0%
CCACCACTGCACCGGGCACA+GGG - chr4_2:61236361-61236380 Msa0612730:intron 70.0%
GCCCGTGGCAGAGCAGACTG+TGG - chr4_2:61236445-61236464 Msa0612730:CDS 70.0%
! ACGGGCGTTGTTGGCGGCGG+AGG + chr4_2:61230639-61230658 None:intergenic 75.0%
CCCTGTGCCCGGTGCAGTGG+TGG + chr4_2:61236364-61236383 None:intergenic 75.0%
GAGCCCTGTGCCCGGTGCAG+TGG + chr4_2:61236367-61236386 None:intergenic 75.0%
GGCAACGGGAGCCCTGTGCC+CGG + chr4_2:61236375-61236394 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 61230455 61236785 61230455 ID=Msa0612730;Name=Msa0612730
chr4_2 mRNA 61230455 61236785 61230455 ID=Msa0612730-mRNA-1;Parent=Msa0612730;Name=Msa0612730-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.33|0.15|1|0.25|0|13|1152|849
chr4_2 exon 61230455 61231306 61230455 ID=Msa0612730-mRNA-1:exon:16641;Parent=Msa0612730-mRNA-1
chr4_2 exon 61231334 61231948 61231334 ID=Msa0612730-mRNA-1:exon:16640;Parent=Msa0612730-mRNA-1
chr4_2 exon 61232931 61233032 61232931 ID=Msa0612730-mRNA-1:exon:16639;Parent=Msa0612730-mRNA-1
chr4_2 exon 61233039 61233278 61233039 ID=Msa0612730-mRNA-1:exon:16638;Parent=Msa0612730-mRNA-1
chr4_2 exon 61233288 61233395 61233288 ID=Msa0612730-mRNA-1:exon:16637;Parent=Msa0612730-mRNA-1
chr4_2 exon 61233853 61234043 61233853 ID=Msa0612730-mRNA-1:exon:16636;Parent=Msa0612730-mRNA-1
chr4_2 exon 61234068 61234250 61234068 ID=Msa0612730-mRNA-1:exon:16635;Parent=Msa0612730-mRNA-1
chr4_2 exon 61234275 61234377 61234275 ID=Msa0612730-mRNA-1:exon:16634;Parent=Msa0612730-mRNA-1
chr4_2 exon 61234532 61234959 61234532 ID=Msa0612730-mRNA-1:exon:16633;Parent=Msa0612730-mRNA-1
chr4_2 exon 61234966 61235204 61234966 ID=Msa0612730-mRNA-1:exon:16632;Parent=Msa0612730-mRNA-1
chr4_2 exon 61235268 61235516 61235268 ID=Msa0612730-mRNA-1:exon:16631;Parent=Msa0612730-mRNA-1
chr4_2 exon 61236382 61236556 61236382 ID=Msa0612730-mRNA-1:exon:16630;Parent=Msa0612730-mRNA-1
chr4_2 exon 61236569 61236785 61236569 ID=Msa0612730-mRNA-1:exon:16629;Parent=Msa0612730-mRNA-1
chr4_2 CDS 61236569 61236785 61236569 ID=Msa0612730-mRNA-1:cds;Parent=Msa0612730-mRNA-1
chr4_2 CDS 61236382 61236556 61236382 ID=Msa0612730-mRNA-1:cds;Parent=Msa0612730-mRNA-1
chr4_2 CDS 61235268 61235516 61235268 ID=Msa0612730-mRNA-1:cds;Parent=Msa0612730-mRNA-1
chr4_2 CDS 61234966 61235204 61234966 ID=Msa0612730-mRNA-1:cds;Parent=Msa0612730-mRNA-1
chr4_2 CDS 61234532 61234959 61234532 ID=Msa0612730-mRNA-1:cds;Parent=Msa0612730-mRNA-1
chr4_2 CDS 61234275 61234377 61234275 ID=Msa0612730-mRNA-1:cds;Parent=Msa0612730-mRNA-1
chr4_2 CDS 61234068 61234250 61234068 ID=Msa0612730-mRNA-1:cds;Parent=Msa0612730-mRNA-1
chr4_2 CDS 61233853 61234043 61233853 ID=Msa0612730-mRNA-1:cds;Parent=Msa0612730-mRNA-1
chr4_2 CDS 61233288 61233395 61233288 ID=Msa0612730-mRNA-1:cds;Parent=Msa0612730-mRNA-1
chr4_2 CDS 61233039 61233278 61233039 ID=Msa0612730-mRNA-1:cds;Parent=Msa0612730-mRNA-1
chr4_2 CDS 61232931 61233032 61232931 ID=Msa0612730-mRNA-1:cds;Parent=Msa0612730-mRNA-1
chr4_2 CDS 61231634 61231948 61231634 ID=Msa0612730-mRNA-1:cds;Parent=Msa0612730-mRNA-1
chr4_2 three_prime_UTR 61231334 61231633 61231334 ID=Msa0612730-mRNA-1:three_prime_utr;Parent=Msa0612730-mRNA-1
chr4_2 three_prime_UTR 61230455 61231306 61230455 ID=Msa0612730-mRNA-1:three_prime_utr;Parent=Msa0612730-mRNA-1
Gene Sequence

>Msa0612730

ATGCAACTCACCTGCAACCTCTTCATCCCCATCAACAAACCCTCAATCCCTCGCTTCTCCTTCAAACCTTGCTTCTGCTACTCAACCGAGTCCAACTCAGTCCAATCCGATAGCCTCAAAACTCTCGAATGGAACTCCATATGCAAGCAACTCTCAGCATTCACTTCCACTTCAATGGGCTCCTCCGCCGCCAACAACGCCCGTTTACCCGTCGGACACAGCCAAAAGCTTCTCGATCAAACCTCCGCTGCCAGACTCATTCCTCAACAACAACTCGACCTTTCTGGAATACATGACTTGACTGACATTCTCTCCGTTGCTGTTTCCAGTAGATTGTTGACTATTCCCGAGCTTTGCACCGTTCGAAGAACACTCGCTGCTTCCAGGGAATTGTACTCACCCCTTCTTGAAATACTGCAAAATTGTAATTTCCTAATGGGCTTGGAGCGCAGGATAGAATTTTGCATAGATTGCAATCTTTTGGTAATTCTTGATAGAGCAAGTGAAGACCTGGAGATCATTAGATCAGAACGAAAAAGGAACATAGAAATCCTGGACTCTTTATTGAAGGAAGTATCGTCTCAAATTTTTCGGGCTGGGGGTATTGACAGACCATTTATTACTAAGCGTCGATCTAGAATCAGCTCTGGAGCAACATACTTTATGGAACCGAAAGAAGCAATAGATTTGAACAACATGGAAGTTAGGCTTTCAAACTCTGAAGCGGCCGAGGAAAGAGCAATTTTGAGTATGCTTGCATCTGAAATAGCAAATTCAGAATCAGAGATAAAATATTTGTTGGATAAAATTCTTGAGATTGATCTTGCTTTTGCAAGAGCTGCCTATGCTCAATGGATGAATGGGGTATGTCCAATTTTCAGTACTATTGGAGGTTGCAATTCTGTTGAAGAGGACAATGACATTGCGGTCGTGCAGGATGACGATTTAACAGTAAATATTGAGGGTATGCGGCATCCATTACTCCTGGAGTCGTCTCTAGAAAACATTTCAGATAATGTCACACTAAGGTCTGGAAATTCTTCTGAGTTGGGTAATGGAAATGGAACAATGGCTTCTAAAAGCGCGTCACAAGGCATAACAGACTTCCCTGTGCCAGTTGACTTCAAAATTAGATCTGGAACTAGAGTTGTGGTCATCTCAGGACCTAATACTGGAGGGAAAACTGCTTCAATGAAAACGTTGGGCCTGGCATCACTTATGTCAAAAGCCGGAATGCATCTGCCTGCCAAGAAAAGTCCAAAACTTCCTTGGTTTGACCTTATCCTTGCAGATATTGGAGATCACCAGTCCCTTGAACAAAATCTCTCAACTTTTAGTGGGCACATCTCACGTATCCGTAAGTTTTTGGAAGTGGCCTCAAAACAATCACTTGTTCTCATTGATGAAATTGGTGTGGCTCTTTCTGCCAGTATCTTACAATATCTGCGGGAACATGTTAACTTGGCTGTTGTGACCACTCATTATGCTGATCTAAGTACTTTGAAGGAAAGGGATACATGTTTTGAAAATGCCGCAATGGAATTTTCACTGGAAACCTTGCAACCAACTTATAGGGTTCTCTGGGGATGTATTGCGCAATCTATTGGCTTTGATAAAAATATAATTGACCATGCACAAAAGTGGGTGGAGAAATTAAAACCAGAACAGCAGCAAGAGCGGAGAGGAATGCTCTATCAGTCATTACAGGAGGAAAAAAATCGGTTAAAGGCTCAAGCTGAAAAGGCTGCTTCCATTCATGCAGAAATTATGAACGTGTACTCTGAGATCCAAAGGGAGGCAGAAGACCTTGATAGACGTGAAACGATGCTTATGGCAAAGGAAGCTCAACGGGTCCAACAAGAGTTAGAGGATGCAAAATCTCAAATGGAAATTAAATTCGAAAAGCAACTAAAAGATTTGGGACGCAACCAACTCAATTCAATAATTAAAGAATCTGAAACTGCAATTGCCTCCATTGTAAAAGCTCATACTCCTGCCGTTGGTTCTCCCATCAGTGGCGCTGATCGCATTACATCATATACTCCACAATTTGGAGAGCAAGTCCGTGTGAAGGGATTGGGAGGAAAATTAGCCACAGTGGTAGAATTGCCTGGGGATGATGAAACAATCTTGTATGGTAAAGTGAAAGTACGTGTGAAGAAAAATCGCATCAGAGCTATTCCACCAAGTGCAAAGAATCCTGCAACTAGTTCTCCCACTCATCAGGGAAAGCAGAAACCACTGAATGGAAAATCCCGGGGTAACTTAGAGATGAACAGCAGCAATGGTGATATTTATTATGGTCCAGCGGTGCAAACATCTAAGAATACTGTGGATCTACGAGGTATGCGACTGGAAGAAGCTGCGATCCATCTTGAGATGACAATCAGCGCAAGTCAGCCATATTCAGTTCTCTTTGTAATACATGGGATGGGCACTGGGGCTGTTAAAGATCGTGCACTTGCTATTCTGCAAAAGCATCCTCGTGTCACTCATTTTGAACCAGAAAGTCCAATGAATTATGGATGTACTGTTGCACGTGTTAAGTGA
Protein sequence

>Msa0612730

MQLTCNLFIPINKPSIPRFSFKPCFCYSTESNSVQSDSLKTLEWNSICKQLSAFTSTSMGSSAANNARLPVGHSQKLLDQTSAARLIPQQQLDLSGIHDLTDILSVAVSSRLLTIPELCTVRRTLAASRELYSPLLEILQNCNFLMGLERRIEFCIDCNLLVILDRASEDLEIIRSERKRNIEILDSLLKEVSSQIFRAGGIDRPFITKRRSRISSGATYFMEPKEAIDLNNMEVRLSNSEAAEERAILSMLASEIANSESEIKYLLDKILEIDLAFARAAYAQWMNGVCPIFSTIGGCNSVEEDNDIAVVQDDDLTVNIEGMRHPLLLESSLENISDNVTLRSGNSSELGNGNGTMASKSASQGITDFPVPVDFKIRSGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKSPKLPWFDLILADIGDHQSLEQNLSTFSGHISRIRKFLEVASKQSLVLIDEIGVALSASILQYLREHVNLAVVTTHYADLSTLKERDTCFENAAMEFSLETLQPTYRVLWGCIAQSIGFDKNIIDHAQKWVEKLKPEQQQERRGMLYQSLQEEKNRLKAQAEKAASIHAEIMNVYSEIQREAEDLDRRETMLMAKEAQRVQQELEDAKSQMEIKFEKQLKDLGRNQLNSIIKESETAIASIVKAHTPAVGSPISGADRITSYTPQFGEQVRVKGLGGKLATVVELPGDDETILYGKVKVRVKKNRIRAIPPSAKNPATSSPTHQGKQKPLNGKSRGNLEMNSSNGDIYYGPAVQTSKNTVDLRGMRLEEAAIHLEMTISASQPYSVLFVIHGMGTGAVKDRALAILQKHPRVTHFEPESPMNYGCTVARVK*