Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469430 | XP_003601956.1 | 99.666 | 299 | 1 | 0 | 1 | 299 | 1 | 299 | 0.0 | 603 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469430 | G7J3S2 | 99.666 | 299 | 1 | 0 | 1 | 299 | 1 | 299 | 0.0 | 603 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016440 | Msa0469430 | 0.805059 | 1.602758e-49 | -8.615850e-47 |
| Msa0045620 | Msa0469430 | 0.805520 | 1.283209e-49 | -8.615850e-47 |
| Msa0055880 | Msa0469430 | 0.834631 | 2.680911e-56 | -8.615850e-47 |
| Msa0056000 | Msa0469430 | 0.833213 | 6.069301e-56 | -8.615850e-47 |
| Msa0086160 | Msa0469430 | 0.845118 | 4.956086e-59 | -8.615850e-47 |
| Msa0089540 | Msa0469430 | 0.816425 | 5.566206e-52 | -8.615850e-47 |
| Msa0123290 | Msa0469430 | 0.804555 | 2.042211e-49 | -8.615850e-47 |
| Msa0132460 | Msa0469430 | 0.828753 | 7.545295e-55 | -8.615850e-47 |
| Msa0134580 | Msa0469430 | 0.801672 | 8.062109e-49 | -8.615850e-47 |
| Msa0153510 | Msa0469430 | 0.837419 | 5.255751e-57 | -8.615850e-47 |
| Msa0182050 | Msa0469430 | 0.830820 | 2.368175e-55 | -8.615850e-47 |
| Msa0182100 | Msa0469430 | 0.835754 | 1.395643e-56 | -8.615850e-47 |
| Msa0188740 | Msa0469430 | 0.802864 | 4.583395e-49 | -8.615850e-47 |
| Msa0192300 | Msa0469430 | 0.836978 | 6.813823e-57 | -8.615850e-47 |
| Msa0374050 | Msa0469430 | 0.961540 | 8.051911e-120 | -8.615850e-47 |
| Msa0388520 | Msa0469430 | 0.822369 | 2.458227e-53 | -8.615850e-47 |
| Msa0398410 | Msa0469430 | 0.840109 | 1.059528e-57 | -8.615850e-47 |
| Msa0416210 | Msa0469430 | 0.803892 | 2.806201e-49 | -8.615850e-47 |
| Msa0423230 | Msa0469430 | 0.963137 | 1.019426e-121 | -8.615850e-47 |
| Msa0467250 | Msa0469430 | 0.814223 | 1.718343e-51 | -8.615850e-47 |
| Msa0469430 | Msa0511760 | 0.804192 | 2.430404e-49 | -8.615850e-47 |
| Msa0469430 | Msa0515110 | 0.984439 | 1.451345e-160 | -8.615850e-47 |
| Msa0469430 | Msa0552570 | 0.819112 | 1.378137e-52 | -8.615850e-47 |
| Msa0469430 | Msa0556620 | 0.839296 | 1.724845e-57 | -8.615850e-47 |
| Msa0469430 | Msa0573550 | 0.830326 | 3.127879e-55 | -8.615850e-47 |
| Msa0469430 | Msa0578010 | 0.802176 | 6.352554e-49 | -8.615850e-47 |
| Msa0469430 | Msa0587180 | 0.801995 | 6.921239e-49 | -8.615850e-47 |
| Msa0469430 | Msa0623310 | 0.805730 | 1.159100e-49 | -8.615850e-47 |
| Msa0469430 | Msa0673940 | 0.800049 | 1.729456e-48 | -8.615850e-47 |
| Msa0469430 | Msa0687370 | 0.806695 | 7.260939e-50 | -8.615850e-47 |
| Msa0469430 | Msa0708630 | 0.831349 | 1.755949e-55 | -8.615850e-47 |
| Msa0469430 | Msa0718560 | 0.801144 | 1.034061e-48 | -8.615850e-47 |
| Msa0469430 | Msa0926760 | 0.812364 | 4.399335e-51 | -8.615850e-47 |
| Msa0469430 | Msa0929700 | 0.825054 | 5.778001e-54 | -8.615850e-47 |
| Msa0469430 | Msa1001620 | 0.825713 | 4.034204e-54 | -8.615850e-47 |
| Msa0469430 | Msa1025200 | 0.823424 | 1.395362e-53 | -8.615850e-47 |
| Msa0469430 | Msa1025220 | 0.828941 | 6.793368e-55 | -8.615850e-47 |
| Msa0469430 | Msa1026710 | 0.836856 | 7.321177e-57 | -8.615850e-47 |
| Msa0469430 | Msa1126690 | 0.813394 | 2.617441e-51 | -8.615850e-47 |
| Msa0469430 | Msa1144610 | 0.802763 | 4.808318e-49 | -8.615850e-47 |
| Msa0469430 | Msa1220580 | 0.800299 | 1.538086e-48 | -8.615850e-47 |
| Msa0469430 | Msa1227350 | 0.802734 | 4.874977e-49 | -8.615850e-47 |
| Msa0469430 | Msa1244920 | 0.804971 | 1.672268e-49 | -8.615850e-47 |
| Msa0469430 | Msa1255850 | 0.803097 | 4.101985e-49 | -8.615850e-47 |
| Msa0469430 | Msa1278030 | 0.818167 | 2.257988e-52 | -8.615850e-47 |
| Msa0469430 | Msa1296090 | 0.839191 | 1.835994e-57 | -8.615850e-47 |
| Msa0469430 | Msa1334560 | 0.804299 | 2.308814e-49 | -8.615850e-47 |
| Msa0469430 | Msa1347610 | 0.838204 | 3.304396e-57 | -8.615850e-47 |
| Msa0469430 | Msa1368170 | 0.855870 | 4.718310e-62 | -8.615850e-47 |
| Msa0469430 | Msa1385570 | 0.851176 | 1.052238e-60 | -8.615850e-47 |
| Msa0469430 | Msa1388890 | 0.809323 | 2.002524e-50 | -8.615850e-47 |
| Msa0469430 | Msa1403520 | 0.832773 | 7.806351e-56 | -8.615850e-47 |
| Msa0469430 | Msa1420830 | 0.845771 | 3.299447e-59 | -8.615850e-47 |
| Msa0469430 | Msa1424570 | 0.821354 | 4.222792e-53 | -8.615850e-47 |
| Msa0469430 | Msa1446510 | 0.819531 | 1.105947e-52 | -8.615850e-47 |
| Msa0270160 | Msa0469430 | 0.825947 | 3.550334e-54 | -8.615850e-47 |
| Msa0301250 | Msa0469430 | 0.838248 | 3.219123e-57 | -8.615850e-47 |
| Msa0313060 | Msa0469430 | 0.832776 | 7.795115e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469430 | MtrunA17_Chr3g0124021 | 99.666 | 299 | 1 | 0 | 1 | 299 | 1 | 299 | 0.0 | 603 |
| Msa0469430 | MtrunA17_Chr3g0115701 | 59.344 | 305 | 96 | 7 | 3 | 299 | 4 | 288 | 9.01e-108 | 315 |
| Msa0469430 | MtrunA17_Chr8g0382291 | 50.321 | 312 | 115 | 6 | 5 | 296 | 4 | 295 | 2.60e-89 | 270 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469430 | AT4G39860.3 | 62.963 | 297 | 109 | 1 | 3 | 299 | 4 | 299 | 5.49e-127 | 364 |
| Msa0469430 | AT4G39860.4 | 62.963 | 297 | 109 | 1 | 3 | 299 | 4 | 299 | 5.49e-127 | 364 |
| Msa0469430 | AT4G39860.1 | 62.963 | 297 | 109 | 1 | 3 | 299 | 4 | 299 | 5.49e-127 | 364 |
| Msa0469430 | AT4G39860.2 | 62.626 | 297 | 109 | 2 | 3 | 299 | 4 | 298 | 2.72e-124 | 357 |
| Msa0469430 | AT1G78150.1 | 52.508 | 299 | 112 | 5 | 3 | 299 | 4 | 274 | 1.59e-90 | 271 |
| Msa0469430 | AT1G78150.2 | 52.508 | 299 | 112 | 5 | 3 | 299 | 4 | 274 | 1.59e-90 | 271 |
| Msa0469430 | AT1G35780.1 | 50.980 | 306 | 118 | 7 | 3 | 299 | 4 | 286 | 6.96e-87 | 262 |
| Msa0469430 | AT1G78150.3 | 47.866 | 328 | 112 | 6 | 3 | 299 | 4 | 303 | 3.24e-84 | 255 |
| Msa0469430 | AT2G22270.1 | 44.615 | 325 | 140 | 11 | 10 | 299 | 9 | 328 | 1.40e-69 | 219 |
| Msa0469430 | AT2G22270.2 | 45.423 | 284 | 116 | 10 | 51 | 299 | 10 | 289 | 2.99e-59 | 191 |
| Msa0469430 | AT1G35780.2 | 49.367 | 237 | 87 | 7 | 71 | 299 | 1 | 212 | 1.08e-58 | 187 |
| Msa0469430 | AT1G35780.4 | 49.367 | 237 | 87 | 7 | 71 | 299 | 1 | 212 | 1.08e-58 | 187 |
| Msa0469430 | AT1G35780.3 | 49.367 | 237 | 87 | 7 | 71 | 299 | 1 | 212 | 1.08e-58 | 187 |
Find 96 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCGATGTCCTCAAATTTC+TGG | 0.079733 | 3_3:+71255041 | None:intergenic |
| TTAACAGGGTCTTTGATTTC+TGG | 0.136628 | 3_3:+71253797 | None:intergenic |
| CAGAAGTTTGCAGAGCTTTC+AGG | 0.210481 | 3_3:-71253926 | Msa0469430:CDS |
| GGGCAAAGTAATATCTTATT+TGG | 0.218414 | 3_3:-71253989 | Msa0469430:CDS |
| CTCTCAGCTTTGCCCTGCTC+AGG | 0.267205 | 3_3:+71253855 | None:intergenic |
| GAAATCAAAGACCCTGTTAA+AGG | 0.278225 | 3_3:-71253794 | Msa0469430:CDS |
| GGTATAGAGGTAGGCTTCTT+AGG | 0.279404 | 3_3:+71255267 | None:intergenic |
| CTCACTGGAAATGATATATT+TGG | 0.293153 | 3_3:-71255150 | Msa0469430:CDS |
| GGTTTGCGGGCACCTTTAAC+AGG | 0.293722 | 3_3:+71253782 | None:intergenic |
| TTCTTTGATGTCTTCTCAAC+AGG | 0.305067 | 3_3:+71253959 | None:intergenic |
| ATGGAACGCGGTACAATTTC+AGG | 0.309840 | 3_3:+71255120 | None:intergenic |
| TCCAGTGAGCTCCTTGGTCT+TGG | 0.319341 | 3_3:+71255164 | None:intergenic |
| GCATCTCAGCAAGCAATAAA+TGG | 0.332847 | 3_3:-71255330 | Msa0469430:intron |
| AATTCCGTGTGAACATTAGT+AGG | 0.335907 | 3_3:-71253673 | Msa0469430:three_prime_UTR |
| CTGAAAGCTCTGCAAACTTC+TGG | 0.342314 | 3_3:+71253927 | None:intergenic |
| CTTAGGACTAACACTTTCTT+CGG | 0.378680 | 3_3:+71255284 | None:intergenic |
| AACTAGCATACGCATATATC+AGG | 0.379428 | 3_3:-71255484 | Msa0469430:intron |
| CATGGCAGCTGCACGAACTT+TGG | 0.379756 | 3_3:-71255100 | Msa0469430:CDS |
| ACCGATGTCCTCAAATTTCT+GGG | 0.398231 | 3_3:+71255042 | None:intergenic |
| ATGTTCAATTATCAGCATCT+AGG | 0.418088 | 3_3:-71253644 | Msa0469430:three_prime_UTR |
| TTCCTGTAATTGTAGCCTGC+TGG | 0.421397 | 3_3:-71254013 | Msa0469430:intron |
| TATTAACATGAAATCTCAAC+TGG | 0.433636 | 3_3:-71253543 | Msa0469430:three_prime_UTR |
| ACTTTCAGCAAGCCATGCTC+AGG | 0.438294 | 3_3:-71255594 | Msa0469430:intron |
| TGGGACTTTGCAAACTGACT+TGG | 0.452037 | 3_3:-71255217 | Msa0469430:CDS |
| TTCACACTCAAAACAACAAT+GGG | 0.456072 | 3_3:-71256651 | Msa0469430:exon |
| TCTCAGCTTTGCCCTGCTCA+GGG | 0.467139 | 3_3:+71253856 | None:intergenic |
| GAGCTTCTTCTTCAGTGAGC+TGG | 0.469415 | 3_3:+71256484 | None:intergenic |
| CTTTGCTACCTCAGGTATAG+AGG | 0.474305 | 3_3:+71255254 | None:intergenic |
| GTCCTCAAATTTCTGGGAAG+AGG | 0.478841 | 3_3:+71255048 | None:intergenic |
| TCACGCTGCTTTGCTACCTC+AGG | 0.479040 | 3_3:+71255246 | None:intergenic |
| GCAATGCTGCTGTCTCCACC+AGG | 0.480965 | 3_3:+71253758 | None:intergenic |
| ATCAGAAGGCTGACGAGAGC+GGG | 0.481733 | 3_3:+71256533 | None:intergenic |
| CTGACGAGAGCGGGTGGCGG+AGG | 0.484128 | 3_3:+71256542 | None:intergenic |
| GAATCAACAACAACGGGAGG+AGG | 0.485353 | 3_3:+71256564 | None:intergenic |
| CAAAGTTCGTGCAGCTGCCA+TGG | 0.485787 | 3_3:+71255101 | None:intergenic |
| CTTACTTAACAGTTAGAAGA+TGG | 0.487759 | 3_3:-71253566 | Msa0469430:three_prime_UTR |
| CGCGGTACAATTTCAGGAGG+AGG | 0.490011 | 3_3:+71255126 | None:intergenic |
| GCGGAGGAATCAACAACAAC+GGG | 0.491550 | 3_3:+71256558 | None:intergenic |
| CTGTAATTGTAGCCTGCTGG+TGG | 0.494796 | 3_3:-71254010 | Msa0469430:intron |
| TTCCATGGAGATGTTCCAGC+AGG | 0.495508 | 3_3:-71253893 | Msa0469430:CDS |
| GCAAAGCTGAGAGAAATAAC+TGG | 0.502572 | 3_3:-71253845 | Msa0469430:CDS |
| AATGCTGCTGTCTCCACCAG+GGG | 0.506313 | 3_3:+71253760 | None:intergenic |
| AACCTCTTCCCAGAAATTTG+AGG | 0.507551 | 3_3:-71255050 | Msa0469430:CDS |
| TGCACGAACTTTGGAATCAA+AGG | 0.509149 | 3_3:-71255091 | Msa0469430:CDS |
| AAGCTCAATCTCTCTCCAAA+AGG | 0.514977 | 3_3:-71256467 | Msa0469430:intron |
| GCCAAGACCAAGGAGCTCAC+TGG | 0.521289 | 3_3:-71255165 | Msa0469430:CDS |
| AATGTTTAAATCAGATCAGA+TGG | 0.522350 | 3_3:+71256785 | None:intergenic |
| AGTGTGAATGAATGAATGAA+TGG | 0.523951 | 3_3:+71256666 | None:intergenic |
| ATATTACTTTGCCCACCAGC+AGG | 0.525761 | 3_3:+71253998 | None:intergenic |
| AGGCTGACGAGAGCGGGTGG+CGG | 0.529442 | 3_3:+71256539 | None:intergenic |
| ATCATTTCCAGTGAGCTCCT+TGG | 0.534478 | 3_3:+71255158 | None:intergenic |
| TGAAATTGTACCGCGTTCCA+TGG | 0.543593 | 3_3:-71255118 | Msa0469430:CDS |
| TCAACAACAACGGGAGGAGG+AGG | 0.546104 | 3_3:+71256567 | None:intergenic |
| ATTCACACTCAAAACAACAA+TGG | 0.547288 | 3_3:-71256652 | Msa0469430:exon |
| ATCAAAGGAAAGCAAGGACA+TGG | 0.548897 | 3_3:-71255076 | Msa0469430:CDS |
| GTTTGCGGGCACCTTTAACA+GGG | 0.549073 | 3_3:+71253783 | None:intergenic |
| GAAGATTCTGCATCAGAAGC+CGG | 0.549556 | 3_3:-71255522 | Msa0469430:CDS |
| GCAAAGCAGCGTGAACTGAG+TGG | 0.567625 | 3_3:-71255237 | Msa0469430:CDS |
| TTGGTGTGTGTCTTTCTCAC+CGG | 0.575218 | 3_3:+71256621 | None:intergenic |
| ACACTTCCGATCTCCTCACT+TGG | 0.577893 | 3_3:-71256599 | Msa0469430:CDS |
| TTTGGAATCAAAGGAAAGCA+AGG | 0.578160 | 3_3:-71255082 | Msa0469430:CDS |
| TCCCAGAAATTTGAGGACAT+CGG | 0.579400 | 3_3:-71255043 | Msa0469430:CDS |
| ATCCTGCTGGAACATCTCCA+TGG | 0.579980 | 3_3:+71253891 | None:intergenic |
| GGCAGTGACATATTTGCTGA+TGG | 0.581577 | 3_3:-71253824 | Msa0469430:CDS |
| GCTACCTCAGGTATAGAGGT+AGG | 0.582241 | 3_3:+71255258 | None:intergenic |
| AAATATCATAATTTAGAGCA+AGG | 0.582571 | 3_3:+71253736 | None:intergenic |
| ATGAAAGAGATGAGTGGACA+TGG | 0.583015 | 3_3:-71255564 | Msa0469430:CDS |
| AGTGAGGAGATCGGAAGTGT+TGG | 0.589898 | 3_3:+71256602 | None:intergenic |
| ATTCCGTGTGAACATTAGTA+GGG | 0.590764 | 3_3:-71253672 | Msa0469430:three_prime_UTR |
| TTCCGATCTCCTCACTTGGT+CGG | 0.594758 | 3_3:-71256595 | Msa0469430:CDS |
| CAATGCTGCTGTCTCCACCA+GGG | 0.594808 | 3_3:+71253759 | None:intergenic |
| TTCCGACCAAGTGAGGAGAT+CGG | 0.598387 | 3_3:+71256593 | None:intergenic |
| CGTGCAGCTGCCATGGAACG+CGG | 0.599947 | 3_3:+71255108 | None:intergenic |
| AACAACAATGGGAAGCACTC+CGG | 0.604363 | 3_3:-71256640 | Msa0469430:exon |
| TATAAAATGAAAGAGATGAG+TGG | 0.604599 | 3_3:-71255570 | Msa0469430:CDS |
| CAAAGCAGCGTGAACTGAGT+GGG | 0.604931 | 3_3:-71255236 | Msa0469430:CDS |
| ACCTTGCTGATTCTATCAGA+AGG | 0.610704 | 3_3:+71256519 | None:intergenic |
| AGAAGGCTGACGAGAGCGGG+TGG | 0.616356 | 3_3:+71256536 | None:intergenic |
| TATCAGAAGGCTGACGAGAG+CGG | 0.623249 | 3_3:+71256532 | None:intergenic |
| GAGGAATCAACAACAACGGG+AGG | 0.627908 | 3_3:+71256561 | None:intergenic |
| GAGGAACTTCCGACCAAGTG+AGG | 0.628730 | 3_3:+71256586 | None:intergenic |
| ATGCTGCTGTCTCCACCAGG+GGG | 0.629578 | 3_3:+71253761 | None:intergenic |
| TTACCCTACTAATGTTCACA+CGG | 0.631075 | 3_3:+71253669 | None:intergenic |
| GCGGTACAATTTCAGGAGGA+GGG | 0.631603 | 3_3:+71255127 | None:intergenic |
| TGAATGAATGAATGAATGGA+AGG | 0.634607 | 3_3:+71256670 | None:intergenic |
| AATGAATGAATGGAAGGTGA+AGG | 0.636407 | 3_3:+71256676 | None:intergenic |
| GCCTTCTGATAGAATCAGCA+AGG | 0.638816 | 3_3:-71256520 | Msa0469430:CDS |
| TGTAATTGTAGCCTGCTGGT+GGG | 0.644942 | 3_3:-71254009 | Msa0469430:intron |
| CTTTCAGCAAGCCATGCTCA+GGG | 0.644956 | 3_3:-71255593 | Msa0469430:intron |
| AATATCAAATGCCAAGACCA+AGG | 0.645109 | 3_3:-71255175 | Msa0469430:CDS |
| GGCGGAGGAATCAACAACAA+CGG | 0.655351 | 3_3:+71256557 | None:intergenic |
| TCAAAGGAAAGCAAGGACAT+GGG | 0.665351 | 3_3:-71255075 | Msa0469430:CDS |
| GAAGCCTACCTCTATACCTG+AGG | 0.688793 | 3_3:-71255262 | Msa0469430:CDS |
| GTTTAAATCAGATCAGATGG+TGG | 0.692644 | 3_3:+71256788 | None:intergenic |
| GAACGCGGTACAATTTCAGG+AGG | 0.704954 | 3_3:+71255123 | None:intergenic |
| TGGAAGGTGAAGGAACAACG+TGG | 0.784347 | 3_3:+71256686 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATTCAAATTGAAAATAAA+CGG | + | chr3_3:71254128-71254147 | None:intergenic | 15.0% |
| !!! | TCAAAATCTACTTTTAAATT+TGG | - | chr3_3:71254245-71254264 | Msa0469430:intron | 15.0% |
| !!! | TATAATATTTTCTTATGACA+TGG | - | chr3_3:71255423-71255442 | Msa0469430:intron | 15.0% |
| !!! | ACTCTTCATTTTTATTTTTT+TGG | - | chr3_3:71255591-71255610 | Msa0469430:intron | 15.0% |
| !!! | CTCTTCATTTTTATTTTTTT+GGG | - | chr3_3:71255592-71255611 | Msa0469430:intron | 15.0% |
| !!! | TCTTCATTTTTATTTTTTTG+GGG | - | chr3_3:71255593-71255612 | Msa0469430:intron | 15.0% |
| !!! | TAAAATTTAAGTCTGTTTTT+GGG | - | chr3_3:71255901-71255920 | Msa0469430:intron | 15.0% |
| !!! | ATCTGTTTCTTAATTTGAAA+TGG | - | chr3_3:71254015-71254034 | Msa0469430:intron | 20.0% |
| !!! | AAAAAAATCACTTTTTTGTG+TGG | + | chr3_3:71254469-71254488 | None:intergenic | 20.0% |
| !!! | ATTAGCTTTTTTCAAATACA+AGG | + | chr3_3:71254534-71254553 | None:intergenic | 20.0% |
| !!! | CTCTAAAATAAAAAGCTATA+AGG | + | chr3_3:71254557-71254576 | None:intergenic | 20.0% |
| !!! | TCATATTTAAGTGTTAGTTT+AGG | + | chr3_3:71254621-71254640 | None:intergenic | 20.0% |
| !!! | AGAAAAAAATCTGAAACAAA+CGG | - | chr3_3:71254658-71254677 | Msa0469430:intron | 20.0% |
| !!! | ATTCACAATTTTCATAACAA+AGG | + | chr3_3:71254686-71254705 | None:intergenic | 20.0% |
| !! | TCAATTTGATGTTTGAAAAA+TGG | + | chr3_3:71254934-71254953 | None:intergenic | 20.0% |
| !!! | ATATTTAAATTTTGCATTCC+AGG | + | chr3_3:71255565-71255584 | None:intergenic | 20.0% |
| !!! | GTAAAATTTAAGTCTGTTTT+TGG | - | chr3_3:71255900-71255919 | Msa0469430:intron | 20.0% |
| !! | AAACACATAAAAGAAACAAA+TGG | + | chr3_3:71256138-71256157 | None:intergenic | 20.0% |
| !!! | AAATATCATAATTTAGAGCA+AGG | + | chr3_3:71256608-71256627 | None:intergenic | 20.0% |
| !! | ATAAAAATCCTACATCAAAA+GGG | + | chr3_3:71256648-71256667 | None:intergenic | 20.0% |
| !! | TATAAAAATCCTACATCAAA+AGG | + | chr3_3:71256649-71256668 | None:intergenic | 20.0% |
| ! | AATGTTTAAATCAGATCAGA+TGG | + | chr3_3:71253559-71253578 | None:intergenic | 25.0% |
| ! | AATTAAGAAACAGATCTATG+CGG | + | chr3_3:71254010-71254029 | None:intergenic | 25.0% |
| !!! | GAATTAAAGAAAGTGTTTTC+AGG | - | chr3_3:71254097-71254116 | Msa0469430:intron | 25.0% |
| ! | TTTAGTTGAATCAAGATTAG+TGG | - | chr3_3:71254172-71254191 | Msa0469430:intron | 25.0% |
| !! | GAAAAAAATCTGAAACAAAC+GGG | - | chr3_3:71254659-71254678 | Msa0469430:intron | 25.0% |
| !! | AAAAAAATCTGAAACAAACG+GGG | - | chr3_3:71254660-71254679 | Msa0469430:intron | 25.0% |
| ! | TATAAAATGAAAGAGATGAG+TGG | - | chr3_3:71254771-71254790 | Msa0469430:intron | 25.0% |
| !! | AGTTTTTGAATTAACAGAAC+CGG | + | chr3_3:71254841-71254860 | None:intergenic | 25.0% |
| ! | GCATATATCAGGTTTATATT+TGG | - | chr3_3:71254868-71254887 | Msa0469430:intron | 25.0% |
| ! | ATGTTTGAAAAATGGCTATA+AGG | + | chr3_3:71254926-71254945 | None:intergenic | 25.0% |
| ! | TTCAAACATCAAATTGAACT+CGG | - | chr3_3:71254937-71254956 | Msa0469430:intron | 25.0% |
| !!! | TCATTTTTATTTTTTTGGGG+TGG | - | chr3_3:71255596-71255615 | Msa0469430:intron | 25.0% |
| !!! | CATTTTTATTTTTTTGGGGT+GGG | - | chr3_3:71255597-71255616 | Msa0469430:intron | 25.0% |
| !!! | ATTTTTATTTTTTTGGGGTG+GGG | - | chr3_3:71255598-71255617 | Msa0469430:intron | 25.0% |
| !!! | TGTCTTTGAAATTTCTATGA+TGG | - | chr3_3:71255856-71255875 | Msa0469430:intron | 25.0% |
| ! | AAAGAAACAAATGGACAAAT+GGG | + | chr3_3:71256129-71256148 | None:intergenic | 25.0% |
| ! | AAAAGAAACAAATGGACAAA+TGG | + | chr3_3:71256130-71256149 | None:intergenic | 25.0% |
| !! | AAAACTATTTTCTCACAAAC+TGG | + | chr3_3:71256243-71256262 | None:intergenic | 25.0% |
| ! | AACTCGTAAGTCATAAATAT+GGG | + | chr3_3:71256285-71256304 | None:intergenic | 25.0% |
| ! | TAACTCGTAAGTCATAAATA+TGG | + | chr3_3:71256286-71256305 | None:intergenic | 25.0% |
| ! | TAAAAATCCTACATCAAAAG+GGG | + | chr3_3:71256647-71256666 | None:intergenic | 25.0% |
| ! | TATTAACATGAAATCTCAAC+TGG | - | chr3_3:71256798-71256817 | Msa0469430:five_prime_UTR | 25.0% |
| TGAATGAATGAATGAATGGA+AGG | + | chr3_3:71253674-71253693 | None:intergenic | 30.0% | |
| AGTGTGAATGAATGAATGAA+TGG | + | chr3_3:71253678-71253697 | None:intergenic | 30.0% | |
| ATTCACACTCAAAACAACAA+TGG | - | chr3_3:71253689-71253708 | Msa0469430:three_prime_UTR | 30.0% | |
| TTCACACTCAAAACAACAAT+GGG | - | chr3_3:71253690-71253709 | Msa0469430:three_prime_UTR | 30.0% | |
| !! | AAATGAAAGTACGTACCTTT+TGG | + | chr3_3:71253892-71253911 | None:intergenic | 30.0% |
| GTAAAAGATCTGATCTGAAA+AGG | + | chr3_3:71253926-71253945 | None:intergenic | 30.0% | |
| !!! | AGCTTTTTTCAAATACAAGG+AGG | + | chr3_3:71254531-71254550 | None:intergenic | 30.0% |
| GAAAATTGTGAATCTAAGCT+AGG | - | chr3_3:71254693-71254712 | Msa0469430:intron | 30.0% | |
| CTCACTGGAAATGATATATT+TGG | - | chr3_3:71255191-71255210 | Msa0469430:CDS | 30.0% | |
| TTCTAATGTAAGTGTCTTCT+AGG | - | chr3_3:71255328-71255347 | Msa0469430:intron | 30.0% | |
| TTATCGATATGAATTGAGCT+AGG | - | chr3_3:71255446-71255465 | Msa0469430:intron | 30.0% | |
| AAGATTCAGGTAGTTGTTAA+TGG | + | chr3_3:71255491-71255510 | None:intergenic | 30.0% | |
| !!! | TTTTTATTTTTTTGGGGTGG+GGG | - | chr3_3:71255599-71255618 | Msa0469430:intron | 30.0% |
| !! | TGGCTTCAATTTAATTTGAC+AGG | + | chr3_3:71255791-71255810 | None:intergenic | 30.0% |
| AAGACAATGTAACAAACTGA+TGG | + | chr3_3:71255842-71255861 | None:intergenic | 30.0% | |
| TAAGATGTGTGTGTTATGTT+TGG | - | chr3_3:71255970-71255989 | Msa0469430:intron | 30.0% | |
| ! | ATTTGGCAAAAGCTACATTT+TGG | + | chr3_3:71256048-71256067 | None:intergenic | 30.0% |
| ACTCGTAAGTCATAAATATG+GGG | + | chr3_3:71256284-71256303 | None:intergenic | 30.0% | |
| GGGCAAAGTAATATCTTATT+TGG | - | chr3_3:71256352-71256371 | Msa0469430:intron | 30.0% | |
| ! | TCAGGCAATAATATTTTCCA+TGG | - | chr3_3:71256433-71256452 | Msa0469430:intron | 30.0% |
| ATGTTCAATTATCAGCATCT+AGG | - | chr3_3:71256697-71256716 | Msa0469430:five_prime_UTR | 30.0% | |
| CTTACTTAACAGTTAGAAGA+TGG | - | chr3_3:71256775-71256794 | Msa0469430:five_prime_UTR | 30.0% | |
| GTTTAAATCAGATCAGATGG+TGG | + | chr3_3:71253556-71253575 | None:intergenic | 35.0% | |
| AATGAATGAATGGAAGGTGA+AGG | + | chr3_3:71253668-71253687 | None:intergenic | 35.0% | |
| AAGATCTGATCTGAAAAGGA+AGG | + | chr3_3:71253922-71253941 | None:intergenic | 35.0% | |
| GATCGAAGAACGATCAAAAA+AGG | + | chr3_3:71253962-71253981 | None:intergenic | 35.0% | |
| ATGCAATCTGCAATCTTATG+TGG | - | chr3_3:71254149-71254168 | Msa0469430:intron | 35.0% | |
| ACACATTCACGTAGTTAACA+TGG | + | chr3_3:71254300-71254319 | None:intergenic | 35.0% | |
| ! | TTCATTTTATACCCTGAGCA+TGG | + | chr3_3:71254762-71254781 | None:intergenic | 35.0% |
| ! | GAGTGGACATGGTATATTTT+CGG | - | chr3_3:71254788-71254807 | Msa0469430:intron | 35.0% |
| ! | CATGGTATATTTTCGGACAA+TGG | - | chr3_3:71254795-71254814 | Msa0469430:intron | 35.0% |
| AACTAGCATACGCATATATC+AGG | - | chr3_3:71254857-71254876 | Msa0469430:intron | 35.0% | |
| CTTAGGACTAACACTTTCTT+CGG | + | chr3_3:71255060-71255079 | None:intergenic | 35.0% | |
| AATATCAAATGCCAAGACCA+AGG | - | chr3_3:71255166-71255185 | Msa0469430:CDS | 35.0% | |
| ! | TTTGGAATCAAAGGAAAGCA+AGG | - | chr3_3:71255259-71255278 | Msa0469430:CDS | 35.0% |
| AACAACTACCTGAATCTTAG+TGG | - | chr3_3:71255493-71255512 | Msa0469430:CDS | 35.0% | |
| !!! | TAGGGGGTAAGATTTTAGTT+TGG | - | chr3_3:71255623-71255642 | Msa0469430:intron | 35.0% |
| !!! | AGGGGGTAAGATTTTAGTTT+GGG | - | chr3_3:71255624-71255643 | Msa0469430:intron | 35.0% |
| !!! | TAAGATTTTAGTTTGGGGGT+TGG | - | chr3_3:71255630-71255649 | Msa0469430:intron | 35.0% |
| !!! | AAGATTTTAGTTTGGGGGTT+GGG | - | chr3_3:71255631-71255650 | Msa0469430:intron | 35.0% |
| !!! | TTAAGTCTGTTTTTGGGTGT+TGG | - | chr3_3:71255907-71255926 | Msa0469430:intron | 35.0% |
| !!! | TAAGTCTGTTTTTGGGTGTT+GGG | - | chr3_3:71255908-71255927 | Msa0469430:intron | 35.0% |
| GTGTGTTATGTTTGGATTGA+CGG | - | chr3_3:71255978-71255997 | Msa0469430:intron | 35.0% | |
| ! | TGTAGCTTTTGCCAAATTCT+TGG | - | chr3_3:71256051-71256070 | Msa0469430:intron | 35.0% |
| GAGATTGACGAAATCACAAT+TGG | + | chr3_3:71256080-71256099 | None:intergenic | 35.0% | |
| ATAAGCAGTAGGTACTTTGT+AGG | + | chr3_3:71256187-71256206 | None:intergenic | 35.0% | |
| TGTTGAGCTAAATAAGCAGT+AGG | + | chr3_3:71256198-71256217 | None:intergenic | 35.0% | |
| ! | CTATTTTCTCACAAACTGGA+CGG | + | chr3_3:71256239-71256258 | None:intergenic | 35.0% |
| CTACAATTACAGGAAAAGGA+AGG | + | chr3_3:71256323-71256342 | None:intergenic | 35.0% | |
| TTCTTTGATGTCTTCTCAAC+AGG | + | chr3_3:71256385-71256404 | None:intergenic | 35.0% | |
| ! | TTAACAGGGTCTTTGATTTC+TGG | + | chr3_3:71256547-71256566 | None:intergenic | 35.0% |
| GAAATCAAAGACCCTGTTAA+AGG | - | chr3_3:71256547-71256566 | Msa0469430:CDS | 35.0% | |
| AATTCCGTGTGAACATTAGT+AGG | - | chr3_3:71256668-71256687 | Msa0469430:five_prime_UTR | 35.0% | |
| ATTCCGTGTGAACATTAGTA+GGG | - | chr3_3:71256669-71256688 | Msa0469430:five_prime_UTR | 35.0% | |
| TTACCCTACTAATGTTCACA+CGG | + | chr3_3:71256675-71256694 | None:intergenic | 35.0% | |
| !! | ACCTTGCTGATTCTATCAGA+AGG | + | chr3_3:71253825-71253844 | None:intergenic | 40.0% |
| AAGCTCAATCTCTCTCCAAA+AGG | - | chr3_3:71253874-71253893 | Msa0469430:CDS | 40.0% | |
| ATCGTTGGATTGAGATCAGA+CGG | + | chr3_3:71254272-71254291 | None:intergenic | 40.0% | |
| GTTAACATGGATGTGATCGT+TGG | + | chr3_3:71254287-71254306 | None:intergenic | 40.0% | |
| TGTGAATCTAAGCTAGGAGA+TGG | - | chr3_3:71254699-71254718 | Msa0469430:intron | 40.0% | |
| ATGAAAGAGATGAGTGGACA+TGG | - | chr3_3:71254777-71254796 | Msa0469430:intron | 40.0% | |
| TCAAACTGGACTCAAGATCA+AGG | + | chr3_3:71254901-71254920 | None:intergenic | 40.0% | |
| ATGGCTATAAGGTCTCAAAC+TGG | + | chr3_3:71254915-71254934 | None:intergenic | 40.0% | |
| GCATCTCAGCAAGCAATAAA+TGG | - | chr3_3:71255011-71255030 | Msa0469430:intron | 40.0% | |
| !! | TGCACGAACTTTGGAATCAA+AGG | - | chr3_3:71255250-71255269 | Msa0469430:CDS | 40.0% |
| ATCAAAGGAAAGCAAGGACA+TGG | - | chr3_3:71255265-71255284 | Msa0469430:CDS | 40.0% | |
| TCAAAGGAAAGCAAGGACAT+GGG | - | chr3_3:71255266-71255285 | Msa0469430:CDS | 40.0% | |
| AACCTCTTCCCAGAAATTTG+AGG | - | chr3_3:71255291-71255310 | Msa0469430:CDS | 40.0% | |
| TCCCAGAAATTTGAGGACAT+CGG | - | chr3_3:71255298-71255317 | Msa0469430:CDS | 40.0% | |
| ACCGATGTCCTCAAATTTCT+GGG | + | chr3_3:71255302-71255321 | None:intergenic | 40.0% | |
| ATTCATCGCCACTAAGATTC+AGG | + | chr3_3:71255504-71255523 | None:intergenic | 40.0% | |
| ! | GAAAGCATAAGGTAAACTGG+TGG | + | chr3_3:71255543-71255562 | None:intergenic | 40.0% |
| ! | CAGGAAAGCATAAGGTAAAC+TGG | + | chr3_3:71255546-71255565 | None:intergenic | 40.0% |
| CAGTTTACCTTATGCTTTCC+TGG | - | chr3_3:71255544-71255563 | Msa0469430:CDS | 40.0% | |
| ! | TTGCATTCCAGGAAAGCATA+AGG | + | chr3_3:71255554-71255573 | None:intergenic | 40.0% |
| !!! | GGGGGTAAGATTTTAGTTTG+GGG | - | chr3_3:71255625-71255644 | Msa0469430:intron | 40.0% |
| !!! | GGGGTAAGATTTTAGTTTGG+GGG | - | chr3_3:71255626-71255645 | Msa0469430:intron | 40.0% |
| !!! | AGATTTTAGTTTGGGGGTTG+GGG | - | chr3_3:71255632-71255651 | Msa0469430:intron | 40.0% |
| TAATACTGTTGCAGCACATG+AGG | - | chr3_3:71255704-71255723 | Msa0469430:intron | 40.0% | |
| GTGTAAGATGTCCACAAGAT+TGG | + | chr3_3:71255731-71255750 | None:intergenic | 40.0% | |
| ! | TAACAAACTGATGGACCTTC+CGG | + | chr3_3:71255833-71255852 | None:intergenic | 40.0% |
| !!! | AAGTCTGTTTTTGGGTGTTG+GGG | - | chr3_3:71255909-71255928 | Msa0469430:intron | 40.0% |
| CGGTGAGTTTGGTAAAATCA+CGG | - | chr3_3:71255998-71256017 | Msa0469430:intron | 40.0% | |
| ! | AGCTTTTGCCAAATTCTTGG+TGG | - | chr3_3:71256054-71256073 | Msa0469430:intron | 40.0% |
| ACAATTGGCCACCAAGAATT+TGG | + | chr3_3:71256065-71256084 | None:intergenic | 40.0% | |
| AATGGGACTGAGAACTTGAT+TGG | + | chr3_3:71256112-71256131 | None:intergenic | 40.0% | |
| CAGGCTACAATTACAGGAAA+AGG | + | chr3_3:71256327-71256346 | None:intergenic | 40.0% | |
| GCAAAGCTGAGAGAAATAAC+TGG | - | chr3_3:71256496-71256515 | Msa0469430:CDS | 40.0% | |
| ! | AAGCTTACCCCTTTTGATGT+AGG | - | chr3_3:71256637-71256656 | Msa0469430:exon | 40.0% |
| !! | AACAACAATGGGAAGCACTC+CGG | - | chr3_3:71253701-71253720 | Msa0469430:three_prime_UTR | 45.0% |
| TTGGTGTGTGTCTTTCTCAC+CGG | + | chr3_3:71253723-71253742 | None:intergenic | 45.0% | |
| GCCTTCTGATAGAATCAGCA+AGG | - | chr3_3:71253821-71253840 | Msa0469430:CDS | 45.0% | |
| GAAGATTCTGCATCAGAAGC+CGG | - | chr3_3:71254819-71254838 | Msa0469430:intron | 45.0% | |
| GGTATAGAGGTAGGCTTCTT+AGG | + | chr3_3:71255077-71255096 | None:intergenic | 45.0% | |
| CTTTGCTACCTCAGGTATAG+AGG | + | chr3_3:71255090-71255109 | None:intergenic | 45.0% | |
| TGGGACTTTGCAAACTGACT+TGG | - | chr3_3:71255124-71255143 | Msa0469430:CDS | 45.0% | |
| ATCATTTCCAGTGAGCTCCT+TGG | + | chr3_3:71255186-71255205 | None:intergenic | 45.0% | |
| ATGGAACGCGGTACAATTTC+AGG | + | chr3_3:71255224-71255243 | None:intergenic | 45.0% | |
| TGAAATTGTACCGCGTTCCA+TGG | - | chr3_3:71255223-71255242 | Msa0469430:CDS | 45.0% | |
| ! | GTCCTCAAATTTCTGGGAAG+AGG | + | chr3_3:71255296-71255315 | None:intergenic | 45.0% |
| CACCGATGTCCTCAAATTTC+TGG | + | chr3_3:71255303-71255322 | None:intergenic | 45.0% | |
| ! | GTAAACTGGTGGATGGTCAA+GGG | + | chr3_3:71255532-71255551 | None:intergenic | 45.0% |
| GCATAAGGTAAACTGGTGGA+TGG | + | chr3_3:71255539-71255558 | None:intergenic | 45.0% | |
| !!! | ATTTTTTTGGGGTGGGGGTT+AGG | - | chr3_3:71255604-71255623 | Msa0469430:intron | 45.0% |
| !!! | TTTTTTTGGGGTGGGGGTTA+GGG | - | chr3_3:71255605-71255624 | Msa0469430:intron | 45.0% |
| !!! | GATTTTAGTTTGGGGGTTGG+GGG | - | chr3_3:71255633-71255652 | Msa0469430:intron | 45.0% |
| !!! | ATTTTAGTTTGGGGGTTGGG+GGG | - | chr3_3:71255634-71255653 | Msa0469430:intron | 45.0% |
| GACAGGCACATGTTAAGAGA+AGG | + | chr3_3:71255774-71255793 | None:intergenic | 45.0% | |
| GATGCAATGCATGTGCAGTT+TGG | + | chr3_3:71255811-71255830 | None:intergenic | 45.0% | |
| AACTGCACATGCATTGCATC+CGG | - | chr3_3:71255811-71255830 | Msa0469430:intron | 45.0% | |
| !!! | AGTCTGTTTTTGGGTGTTGG+GGG | - | chr3_3:71255910-71255929 | Msa0469430:intron | 45.0% |
| GTTTGGATTGACGGTGAGTT+TGG | - | chr3_3:71255987-71256006 | Msa0469430:intron | 45.0% | |
| CTCACAAACTGGACGGTTTA+AGG | + | chr3_3:71256232-71256251 | None:intergenic | 45.0% | |
| CAGGAAAAGGAAGGTTAACC+TGG | + | chr3_3:71256314-71256333 | None:intergenic | 45.0% | |
| TTCCTGTAATTGTAGCCTGC+TGG | - | chr3_3:71256328-71256347 | Msa0469430:intron | 45.0% | |
| TGTAATTGTAGCCTGCTGGT+GGG | - | chr3_3:71256332-71256351 | Msa0469430:intron | 45.0% | |
| ATATTACTTTGCCCACCAGC+AGG | + | chr3_3:71256346-71256365 | None:intergenic | 45.0% | |
| CTGAAAGCTCTGCAAACTTC+TGG | + | chr3_3:71256417-71256436 | None:intergenic | 45.0% | |
| CAGAAGTTTGCAGAGCTTTC+AGG | - | chr3_3:71256415-71256434 | Msa0469430:intron | 45.0% | |
| !! | GATTTTTCAGCTGATCCTGC+TGG | + | chr3_3:71256466-71256485 | None:intergenic | 45.0% |
| AGCTGAAAAATCCCTGAGCA+GGG | - | chr3_3:71256474-71256493 | Msa0469430:CDS | 45.0% | |
| ! | GGCAGTGACATATTTGCTGA+TGG | - | chr3_3:71256517-71256536 | Msa0469430:CDS | 45.0% |
| TGGAAGGTGAAGGAACAACG+TGG | + | chr3_3:71253658-71253677 | None:intergenic | 50.0% | |
| ! | AGTGAGGAGATCGGAAGTGT+TGG | + | chr3_3:71253742-71253761 | None:intergenic | 50.0% |
| ACACTTCCGATCTCCTCACT+TGG | - | chr3_3:71253742-71253761 | Msa0469430:exon | 50.0% | |
| TTCCGATCTCCTCACTTGGT+CGG | - | chr3_3:71253746-71253765 | Msa0469430:exon | 50.0% | |
| TTCCGACCAAGTGAGGAGAT+CGG | + | chr3_3:71253751-71253770 | None:intergenic | 50.0% | |
| GAATCAACAACAACGGGAGG+AGG | + | chr3_3:71253780-71253799 | None:intergenic | 50.0% | |
| GAGGAATCAACAACAACGGG+AGG | + | chr3_3:71253783-71253802 | None:intergenic | 50.0% | |
| GCGGAGGAATCAACAACAAC+GGG | + | chr3_3:71253786-71253805 | None:intergenic | 50.0% | |
| GGCGGAGGAATCAACAACAA+CGG | + | chr3_3:71253787-71253806 | None:intergenic | 50.0% | |
| TATCAGAAGGCTGACGAGAG+CGG | + | chr3_3:71253812-71253831 | None:intergenic | 50.0% | |
| GAGCTTCTTCTTCAGTGAGC+TGG | + | chr3_3:71253860-71253879 | None:intergenic | 50.0% | |
| ACTTTCAGCAAGCCATGCTC+AGG | - | chr3_3:71254747-71254766 | Msa0469430:intron | 50.0% | |
| CTTTCAGCAAGCCATGCTCA+GGG | - | chr3_3:71254748-71254767 | Msa0469430:intron | 50.0% | |
| GAAGCCTACCTCTATACCTG+AGG | - | chr3_3:71255079-71255098 | Msa0469430:CDS | 50.0% | |
| GCTACCTCAGGTATAGAGGT+AGG | + | chr3_3:71255086-71255105 | None:intergenic | 50.0% | |
| CAAAGCAGCGTGAACTGAGT+GGG | - | chr3_3:71255105-71255124 | Msa0469430:CDS | 50.0% | |
| GCGGTACAATTTCAGGAGGA+GGG | + | chr3_3:71255217-71255236 | None:intergenic | 50.0% | |
| GAACGCGGTACAATTTCAGG+AGG | + | chr3_3:71255221-71255240 | None:intergenic | 50.0% | |
| ! | GGTAAACTGGTGGATGGTCA+AGG | + | chr3_3:71255533-71255552 | None:intergenic | 50.0% |
| !!! | TTTTTTGGGGTGGGGGTTAG+GGG | - | chr3_3:71255606-71255625 | Msa0469430:intron | 50.0% |
| GCACATGAGGACCAATCTTG+TGG | - | chr3_3:71255717-71255736 | Msa0469430:intron | 50.0% | |
| !!! | TGTTTTTGGGTGTTGGGGGT+GGG | - | chr3_3:71255914-71255933 | Msa0469430:intron | 50.0% |
| GACTTACGAGTTACGACTCC+AGG | - | chr3_3:71256293-71256312 | Msa0469430:intron | 50.0% | |
| CACCAGCAGGCTACAATTAC+AGG | + | chr3_3:71256333-71256352 | None:intergenic | 50.0% | |
| CTGTAATTGTAGCCTGCTGG+TGG | - | chr3_3:71256331-71256350 | Msa0469430:intron | 50.0% | |
| TTCCATGGAGATGTTCCAGC+AGG | - | chr3_3:71256448-71256467 | Msa0469430:intron | 50.0% | |
| ATCCTGCTGGAACATCTCCA+TGG | + | chr3_3:71256453-71256472 | None:intergenic | 50.0% | |
| CAGCTGAAAAATCCCTGAGC+AGG | - | chr3_3:71256473-71256492 | Msa0469430:CDS | 50.0% | |
| GTTTGCGGGCACCTTTAACA+GGG | + | chr3_3:71256561-71256580 | None:intergenic | 50.0% | |
| GAGGAACTTCCGACCAAGTG+AGG | + | chr3_3:71253758-71253777 | None:intergenic | 55.0% | |
| TCAACAACAACGGGAGGAGG+AGG | + | chr3_3:71253777-71253796 | None:intergenic | 55.0% | |
| ATCAGAAGGCTGACGAGAGC+GGG | + | chr3_3:71253811-71253830 | None:intergenic | 55.0% | |
| ! | TCACGCTGCTTTGCTACCTC+AGG | + | chr3_3:71255098-71255117 | None:intergenic | 55.0% |
| GCAAAGCAGCGTGAACTGAG+TGG | - | chr3_3:71255104-71255123 | Msa0469430:CDS | 55.0% | |
| TCCAGTGAGCTCCTTGGTCT+TGG | + | chr3_3:71255180-71255199 | None:intergenic | 55.0% | |
| CGCGGTACAATTTCAGGAGG+AGG | + | chr3_3:71255218-71255237 | None:intergenic | 55.0% | |
| CAAAGTTCGTGCAGCTGCCA+TGG | + | chr3_3:71255243-71255262 | None:intergenic | 55.0% | |
| CATGGCAGCTGCACGAACTT+TGG | - | chr3_3:71255241-71255260 | Msa0469430:CDS | 55.0% | |
| !!! | TTTTTGGGGTGGGGGTTAGG+GGG | - | chr3_3:71255607-71255626 | Msa0469430:intron | 55.0% |
| GCACATGCATTGCATCCGGA+AGG | - | chr3_3:71255815-71255834 | Msa0469430:intron | 55.0% | |
| !!! | CTGTTTTTGGGTGTTGGGGG+TGG | - | chr3_3:71255913-71255932 | Msa0469430:intron | 55.0% |
| !!! | GTTTTTGGGTGTTGGGGGTG+GGG | - | chr3_3:71255915-71255934 | Msa0469430:intron | 55.0% |
| TCTCAGCTTTGCCCTGCTCA+GGG | + | chr3_3:71256488-71256507 | None:intergenic | 55.0% | |
| GGTTTGCGGGCACCTTTAAC+AGG | + | chr3_3:71256562-71256581 | None:intergenic | 55.0% | |
| AATGCTGCTGTCTCCACCAG+GGG | + | chr3_3:71256584-71256603 | None:intergenic | 55.0% | |
| CAATGCTGCTGTCTCCACCA+GGG | + | chr3_3:71256585-71256604 | None:intergenic | 55.0% | |
| GCCAAGACCAAGGAGCTCAC+TGG | - | chr3_3:71255176-71255195 | Msa0469430:CDS | 60.0% | |
| CTCTCAGCTTTGCCCTGCTC+AGG | + | chr3_3:71256489-71256508 | None:intergenic | 60.0% | |
| TGTCTCCACCAGGGGGTTTG+CGG | + | chr3_3:71256576-71256595 | None:intergenic | 60.0% | |
| ATGCTGCTGTCTCCACCAGG+GGG | + | chr3_3:71256583-71256602 | None:intergenic | 60.0% | |
| GCAATGCTGCTGTCTCCACC+AGG | + | chr3_3:71256586-71256605 | None:intergenic | 60.0% | |
| AGAAGGCTGACGAGAGCGGG+TGG | + | chr3_3:71253808-71253827 | None:intergenic | 65.0% | |
| CGTGCAGCTGCCATGGAACG+CGG | + | chr3_3:71255236-71255255 | None:intergenic | 65.0% | |
| !! | AAAGGTGCCCGCAAACCCCC+TGG | - | chr3_3:71256565-71256584 | Msa0469430:CDS | 65.0% |
| GTCTCCACCAGGGGGTTTGC+GGG | + | chr3_3:71256575-71256594 | None:intergenic | 65.0% | |
| AGGCTGACGAGAGCGGGTGG+CGG | + | chr3_3:71253805-71253824 | None:intergenic | 70.0% | |
| ! | CTGACGAGAGCGGGTGGCGG+AGG | + | chr3_3:71253802-71253821 | None:intergenic | 75.0% |
| GGTGCCCGCAAACCCCCTGG+TGG | - | chr3_3:71256568-71256587 | Msa0469430:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 71253505 | 71256858 | 71253505 | ID=Msa0469430;Name=Msa0469430 |
| chr3_3 | mRNA | 71253505 | 71256858 | 71253505 | ID=Msa0469430-mRNA-1;Parent=Msa0469430;Name=Msa0469430-mRNA-1;_AED=0.05;_eAED=0.05;_QI=203|1|1|1|1|1|4|243|299 |
| chr3_3 | exon | 71253505 | 71254020 | 71253505 | ID=Msa0469430-mRNA-1:exon:17493;Parent=Msa0469430-mRNA-1 |
| chr3_3 | exon | 71255029 | 71255343 | 71255029 | ID=Msa0469430-mRNA-1:exon:17492;Parent=Msa0469430-mRNA-1 |
| chr3_3 | exon | 71255485 | 71255608 | 71255485 | ID=Msa0469430-mRNA-1:exon:17491;Parent=Msa0469430-mRNA-1 |
| chr3_3 | exon | 71256468 | 71256858 | 71256468 | ID=Msa0469430-mRNA-1:exon:17490;Parent=Msa0469430-mRNA-1 |
| chr3_3 | five_prime_UTR | 71256656 | 71256858 | 71256656 | ID=Msa0469430-mRNA-1:five_prime_utr;Parent=Msa0469430-mRNA-1 |
| chr3_3 | CDS | 71256468 | 71256655 | 71256468 | ID=Msa0469430-mRNA-1:cds;Parent=Msa0469430-mRNA-1 |
| chr3_3 | CDS | 71255485 | 71255608 | 71255485 | ID=Msa0469430-mRNA-1:cds;Parent=Msa0469430-mRNA-1 |
| chr3_3 | CDS | 71255029 | 71255343 | 71255029 | ID=Msa0469430-mRNA-1:cds;Parent=Msa0469430-mRNA-1 |
| chr3_3 | CDS | 71253748 | 71254020 | 71253748 | ID=Msa0469430-mRNA-1:cds;Parent=Msa0469430-mRNA-1 |
| chr3_3 | three_prime_UTR | 71253505 | 71253747 | 71253505 | ID=Msa0469430-mRNA-1:three_prime_utr;Parent=Msa0469430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
