Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0077610 | KEH35146.1 | 89.831 | 59 | 6 | 0 | 71 | 129 | 9 | 67 | 3.20e-28 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0077610 | A0A072V0B1 | 89.831 | 59 | 6 | 0 | 71 | 129 | 9 | 67 | 1.53e-28 | 110 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011170 | Msa0077610 | 0.817259 | 3.617398e-52 | -8.615850e-47 |
| Msa0012060 | Msa0077610 | 0.818906 | 1.534808e-52 | -8.615850e-47 |
| Msa0017510 | Msa0077610 | 0.822178 | 2.721519e-53 | -8.615850e-47 |
| Msa0020930 | Msa0077610 | 0.808548 | 2.933638e-50 | -8.615850e-47 |
| Msa0037880 | Msa0077610 | 0.800915 | 1.151896e-48 | -8.615850e-47 |
| Msa0040450 | Msa0077610 | 0.804095 | 2.546797e-49 | -8.615850e-47 |
| Msa0043980 | Msa0077610 | 0.826634 | 2.435850e-54 | -8.615850e-47 |
| Msa0044260 | Msa0077610 | 0.821529 | 3.847007e-53 | -8.615850e-47 |
| Msa0068680 | Msa0077610 | 0.844133 | 9.129513e-59 | -8.615850e-47 |
| Msa0077610 | Msa0077670 | 0.968521 | 8.535822e-129 | -8.615850e-47 |
| Msa0077610 | Msa0095560 | 0.803398 | 3.553550e-49 | -8.615850e-47 |
| Msa0077610 | Msa0100090 | 0.811723 | 6.069541e-51 | -8.615850e-47 |
| Msa0077610 | Msa0114060 | 0.815963 | 7.062417e-52 | -8.615850e-47 |
| Msa0077610 | Msa0115810 | 0.811538 | 6.658003e-51 | -8.615850e-47 |
| Msa0077610 | Msa0116770 | 0.811858 | 5.674421e-51 | -8.615850e-47 |
| Msa0077610 | Msa0121380 | 0.801729 | 7.848045e-49 | -8.615850e-47 |
| Msa0077610 | Msa0122590 | 0.824050 | 9.954588e-54 | -8.615850e-47 |
| Msa0077610 | Msa0123300 | 0.800225 | 1.592399e-48 | -8.615850e-47 |
| Msa0077610 | Msa0135820 | 0.809572 | 1.771205e-50 | -8.615850e-47 |
| Msa0077610 | Msa0157290 | 0.821926 | 3.113089e-53 | -8.615850e-47 |
| Msa0077610 | Msa0157310 | 0.984182 | 8.010987e-160 | -8.615850e-47 |
| Msa0077610 | Msa0159770 | 0.822976 | 1.775516e-53 | -8.615850e-47 |
| Msa0077610 | Msa0159930 | 0.819188 | 1.323830e-52 | -8.615850e-47 |
| Msa0077610 | Msa0165210 | 0.801621 | 8.257711e-49 | -8.615850e-47 |
| Msa0077610 | Msa0165220 | 0.811858 | 5.674421e-51 | -8.615850e-47 |
| Msa0077610 | Msa0166870 | 0.828510 | 8.636926e-55 | -8.615850e-47 |
| Msa0077610 | Msa0168430 | 0.804153 | 2.477045e-49 | -8.615850e-47 |
| Msa0077610 | Msa0169860 | 0.806948 | 6.418694e-50 | -8.615850e-47 |
| Msa0077610 | Msa0173990 | 0.821342 | 4.248069e-53 | -8.615850e-47 |
| Msa0077610 | Msa0178930 | 0.820872 | 5.451236e-53 | -8.615850e-47 |
| Msa0077610 | Msa0179580 | 0.801834 | 7.467559e-49 | -8.615850e-47 |
| Msa0077610 | Msa0184960 | 0.829018 | 6.510093e-55 | -8.615850e-47 |
| Msa0077610 | Msa0188830 | 0.837300 | 5.636956e-57 | -8.615850e-47 |
| Msa0077610 | Msa0191250 | 0.803793 | 2.941565e-49 | -8.615850e-47 |
| Msa0077610 | Msa0197660 | 0.832064 | 1.169687e-55 | -8.615850e-47 |
| Msa0077610 | Msa0206790 | 0.806272 | 8.914932e-50 | -8.615850e-47 |
| Msa0077610 | Msa0212990 | 0.806918 | 6.513714e-50 | -8.615850e-47 |
| Msa0077610 | Msa0217680 | 0.811979 | 5.338866e-51 | -8.615850e-47 |
| Msa0077610 | Msa0220580 | 0.845904 | 3.035853e-59 | -8.615850e-47 |
| Msa0077610 | Msa0222620 | 0.821466 | 3.978017e-53 | -8.615850e-47 |
| Msa0077610 | Msa0222890 | 0.816126 | 6.492366e-52 | -8.615850e-47 |
| Msa0077610 | Msa0223010 | 0.805460 | 1.321087e-49 | -8.615850e-47 |
| Msa0077610 | Msa0233810 | 0.880232 | 6.501741e-70 | -8.615850e-47 |
| Msa0077610 | Msa0239800 | 0.831099 | 2.022303e-55 | -8.615850e-47 |
| Msa0077610 | Msa0242430 | 0.814870 | 1.235955e-51 | -8.615850e-47 |
| Msa0077610 | Msa0243100 | 0.810851 | 9.383534e-51 | -8.615850e-47 |
| Msa0077610 | Msa0243710 | 0.820444 | 6.837722e-53 | -8.615850e-47 |
| Msa0077610 | Msa0258760 | 0.807134 | 5.863756e-50 | -8.615850e-47 |
| Msa0077610 | Msa0260680 | 0.810928 | 9.030781e-51 | -8.615850e-47 |
| Msa0077610 | Msa0265380 | 0.832612 | 8.561504e-56 | -8.615850e-47 |
| Msa0077610 | Msa0270100 | 0.837474 | 5.087796e-57 | -8.615850e-47 |
| Msa0077610 | Msa0276920 | 0.803384 | 3.576783e-49 | -8.615850e-47 |
| Msa0077610 | Msa0277820 | 0.807869 | 4.093808e-50 | -8.615850e-47 |
| Msa0077610 | Msa0280090 | 0.802251 | 6.131378e-49 | -8.615850e-47 |
| Msa0077610 | Msa0282250 | 0.816648 | 4.962641e-52 | -8.615850e-47 |
| Msa0077610 | Msa0285450 | 0.827688 | 1.362820e-54 | -8.615850e-47 |
| Msa0077610 | Msa0287410 | 0.801043 | 1.084682e-48 | -8.615850e-47 |
| Msa0077610 | Msa0287650 | 0.826716 | 2.328256e-54 | -8.615850e-47 |
| Msa0077610 | Msa0288100 | 0.837530 | 4.923598e-57 | -8.615850e-47 |
| Msa0077610 | Msa0303360 | 0.814626 | 1.399576e-51 | -8.615850e-47 |
| Msa0077610 | Msa0309770 | 0.824458 | 7.985506e-54 | -8.615850e-47 |
| Msa0077610 | Msa0317510 | 0.835484 | 1.633877e-56 | -8.615850e-47 |
| Msa0077610 | Msa0319170 | 0.813945 | 1.979299e-51 | -8.615850e-47 |
| Msa0077610 | Msa0326520 | 0.833095 | 6.493985e-56 | -8.615850e-47 |
| Msa0077610 | Msa0330340 | 0.807954 | 3.926169e-50 | -8.615850e-47 |
| Msa0077610 | Msa0336250 | 0.805998 | 1.018273e-49 | -8.615850e-47 |
| Msa0077610 | Msa0339620 | 0.805597 | 1.236322e-49 | -8.615850e-47 |
| Msa0077610 | Msa0342360 | 0.828300 | 9.707709e-55 | -8.615850e-47 |
| Msa0077610 | Msa0344870 | 0.800999 | 1.107223e-48 | -8.615850e-47 |
| Msa0077610 | Msa0345970 | 0.804225 | 2.392265e-49 | -8.615850e-47 |
| Msa0077610 | Msa0347360 | 0.803739 | 3.019723e-49 | -8.615850e-47 |
| Msa0077610 | Msa0351380 | 0.803340 | 3.652025e-49 | -8.615850e-47 |
| Msa0077610 | Msa0359030 | 0.829464 | 5.073598e-55 | -8.615850e-47 |
| Msa0077610 | Msa0363910 | 0.877505 | 5.955871e-69 | -8.615850e-47 |
| Msa0077610 | Msa0369440 | 0.816016 | 6.870377e-52 | -8.615850e-47 |
| Msa0077610 | Msa0376350 | 0.805509 | 1.289741e-49 | -8.615850e-47 |
| Msa0077610 | Msa0379640 | 0.824048 | 9.965297e-54 | -8.615850e-47 |
| Msa0077610 | Msa0389340 | 0.805958 | 1.038108e-49 | -8.615850e-47 |
| Msa0077610 | Msa0395790 | 0.811902 | 5.548918e-51 | -8.615850e-47 |
| Msa0077610 | Msa0395970 | 0.817847 | 2.667326e-52 | -8.615850e-47 |
| Msa0077610 | Msa0417270 | 0.801767 | 7.709270e-49 | -8.615850e-47 |
| Msa0077610 | Msa0428080 | 0.808370 | 3.202102e-50 | -8.615850e-47 |
| Msa0077610 | Msa0431060 | 0.804391 | 2.208933e-49 | -8.615850e-47 |
| Msa0077610 | Msa0431670 | 0.801868 | 7.348422e-49 | -8.615850e-47 |
| Msa0077610 | Msa0432770 | 0.809862 | 1.533824e-50 | -8.615850e-47 |
| Msa0077610 | Msa0436760 | 0.808165 | 3.540449e-50 | -8.615850e-47 |
| Msa0077610 | Msa0442200 | 0.805371 | 1.378529e-49 | -8.615850e-47 |
| Msa0077610 | Msa0442670 | 0.804177 | 2.447775e-49 | -8.615850e-47 |
| Msa0077610 | Msa0444750 | -0.802673 | 5.017947e-49 | -8.615850e-47 |
| Msa0077610 | Msa0445280 | 0.814583 | 1.430586e-51 | -8.615850e-47 |
| Msa0077610 | Msa0453330 | 0.825808 | 3.831079e-54 | -8.615850e-47 |
| Msa0077610 | Msa0464100 | 0.804327 | 2.278747e-49 | -8.615850e-47 |
| Msa0077610 | Msa0466390 | 0.804826 | 1.792765e-49 | -8.615850e-47 |
| Msa0077610 | Msa0469160 | 0.803770 | 2.975414e-49 | -8.615850e-47 |
| Msa0077610 | Msa0477130 | -0.807341 | 5.299435e-50 | -8.615850e-47 |
| Msa0077610 | Msa0480000 | 0.804409 | 2.190581e-49 | -8.615850e-47 |
| Msa0077610 | Msa0481530 | 0.807354 | 5.265335e-50 | -8.615850e-47 |
| Msa0077610 | Msa0484780 | 0.858872 | 6.111384e-63 | -8.615850e-47 |
| Msa0077610 | Msa0488400 | 0.808223 | 3.442304e-50 | -8.615850e-47 |
| Msa0077610 | Msa0488560 | 0.801384 | 9.236681e-49 | -8.615850e-47 |
| Msa0077610 | Msa0495330 | 0.828611 | 8.165626e-55 | -8.615850e-47 |
| Msa0077610 | Msa0498650 | 0.803059 | 4.176253e-49 | -8.615850e-47 |
| Msa0077610 | Msa0500360 | 0.805771 | 1.136461e-49 | -8.615850e-47 |
| Msa0077610 | Msa0512750 | 0.816695 | 4.844361e-52 | -8.615850e-47 |
| Msa0077610 | Msa0512870 | 0.800972 | 1.121301e-48 | -8.615850e-47 |
| Msa0077610 | Msa0512900 | 0.820457 | 6.790859e-53 | -8.615850e-47 |
| Msa0077610 | Msa0515010 | 0.814414 | 1.559872e-51 | -8.615850e-47 |
| Msa0077610 | Msa0518380 | 0.811044 | 8.523976e-51 | -8.615850e-47 |
| Msa0077610 | Msa0523460 | 0.804538 | 2.058996e-49 | -8.615850e-47 |
| Msa0077610 | Msa0529890 | 0.813552 | 2.415850e-51 | -8.615850e-47 |
| Msa0077610 | Msa0531180 | 0.803484 | 3.410225e-49 | -8.615850e-47 |
| Msa0077610 | Msa0532060 | 0.831042 | 2.089149e-55 | -8.615850e-47 |
| Msa0077610 | Msa0532170 | 0.830317 | 3.142971e-55 | -8.615850e-47 |
| Msa0077610 | Msa0536220 | 0.823674 | 1.219535e-53 | -8.615850e-47 |
| Msa0077610 | Msa0545070 | 0.801908 | 7.212717e-49 | -8.615850e-47 |
| Msa0077610 | Msa0555020 | 0.808486 | 3.025481e-50 | -8.615850e-47 |
| Msa0077610 | Msa0558690 | 0.803788 | 2.949291e-49 | -8.615850e-47 |
| Msa0077610 | Msa0562440 | 0.802497 | 5.456265e-49 | -8.615850e-47 |
| Msa0077610 | Msa0563840 | 0.818073 | 2.371390e-52 | -8.615850e-47 |
| Msa0077610 | Msa0577500 | 0.837963 | 3.810982e-57 | -8.615850e-47 |
| Msa0077610 | Msa0585230 | 0.823958 | 1.046564e-53 | -8.615850e-47 |
| Msa0077610 | Msa0590840 | 0.807506 | 4.889330e-50 | -8.615850e-47 |
| Msa0077610 | Msa0608160 | 0.838314 | 3.095274e-57 | -8.615850e-47 |
| Msa0077610 | Msa0610430 | 0.806783 | 6.955500e-50 | -8.615850e-47 |
| Msa0077610 | Msa0613090 | 0.821256 | 4.448368e-53 | -8.615850e-47 |
| Msa0077610 | Msa0621490 | 0.809452 | 1.879142e-50 | -8.615850e-47 |
| Msa0077610 | Msa0622650 | 0.800852 | 1.186337e-48 | -8.615850e-47 |
| Msa0077610 | Msa0625720 | 0.813176 | 2.921929e-51 | -8.615850e-47 |
| Msa0077610 | Msa0631200 | 0.817372 | 3.411568e-52 | -8.615850e-47 |
| Msa0077610 | Msa0633060 | 0.814705 | 1.344883e-51 | -8.615850e-47 |
| Msa0077610 | Msa0633840 | 0.812833 | 3.474831e-51 | -8.615850e-47 |
| Msa0077610 | Msa0636020 | 0.807617 | 4.631380e-50 | -8.615850e-47 |
| Msa0077610 | Msa0637900 | 0.806907 | 6.549764e-50 | -8.615850e-47 |
| Msa0077610 | Msa0638070 | 0.820326 | 7.276001e-53 | -8.615850e-47 |
| Msa0077610 | Msa0648080 | 0.842189 | 3.010764e-58 | -8.615850e-47 |
| Msa0077610 | Msa0648880 | 0.806119 | 9.600448e-50 | -8.615850e-47 |
| Msa0077610 | Msa0657610 | 0.807850 | 4.132403e-50 | -8.615850e-47 |
| Msa0077610 | Msa0657970 | 0.827794 | 1.285036e-54 | -8.615850e-47 |
| Msa0077610 | Msa0658570 | 0.811806 | 5.823218e-51 | -8.615850e-47 |
| Msa0077610 | Msa0663240 | 0.811262 | 7.642994e-51 | -8.615850e-47 |
| Msa0077610 | Msa0669440 | 0.823661 | 1.228576e-53 | -8.615850e-47 |
| Msa0077610 | Msa0672690 | 0.829515 | 4.930139e-55 | -8.615850e-47 |
| Msa0077610 | Msa0673460 | 0.817301 | 3.540712e-52 | -8.615850e-47 |
| Msa0077610 | Msa0676760 | 0.827289 | 1.698287e-54 | -8.615850e-47 |
| Msa0077610 | Msa0682550 | 0.805774 | 1.134594e-49 | -8.615850e-47 |
| Msa0077610 | Msa0687020 | 0.808319 | 3.282687e-50 | -8.615850e-47 |
| Msa0077610 | Msa0688070 | 0.824188 | 9.239883e-54 | -8.615850e-47 |
| Msa0077610 | Msa0688480 | 0.819121 | 1.371147e-52 | -8.615850e-47 |
| Msa0077610 | Msa0691380 | 0.815555 | 8.707992e-52 | -8.615850e-47 |
| Msa0077610 | Msa0692230 | 0.822315 | 2.529780e-53 | -8.615850e-47 |
| Msa0077610 | Msa0693380 | 0.848087 | 7.662752e-60 | -8.615850e-47 |
| Msa0077610 | Msa0693600 | 0.801596 | 8.358069e-49 | -8.615850e-47 |
| Msa0077610 | Msa0696640 | 0.814282 | 1.668116e-51 | -8.615850e-47 |
| Msa0077610 | Msa0701900 | 0.809860 | 1.535557e-50 | -8.615850e-47 |
| Msa0077610 | Msa0703490 | 0.801444 | 8.977036e-49 | -8.615850e-47 |
| Msa0077610 | Msa0703780 | 0.806065 | 9.857526e-50 | -8.615850e-47 |
| Msa0077610 | Msa0715470 | 0.808254 | 3.390509e-50 | -8.615850e-47 |
| Msa0077610 | Msa0736860 | 0.806243 | 9.041105e-50 | -8.615850e-47 |
| Msa0077610 | Msa0740510 | 0.808562 | 2.914588e-50 | -8.615850e-47 |
| Msa0077610 | Msa0744040 | 0.833846 | 4.216728e-56 | -8.615850e-47 |
| Msa0077610 | Msa0753720 | 0.833188 | 6.155231e-56 | -8.615850e-47 |
| Msa0077610 | Msa0760130 | 0.806017 | 1.008848e-49 | -8.615850e-47 |
| Msa0077610 | Msa0762970 | 0.801267 | 9.760687e-49 | -8.615850e-47 |
| Msa0077610 | Msa0778520 | 0.833181 | 6.180839e-56 | -8.615850e-47 |
| Msa0077610 | Msa0788710 | 0.825991 | 3.465254e-54 | -8.615850e-47 |
| Msa0077610 | Msa0790510 | 0.844913 | 5.629891e-59 | -8.615850e-47 |
| Msa0077610 | Msa0796700 | 0.805828 | 1.105710e-49 | -8.615850e-47 |
| Msa0077610 | Msa0816590 | 0.814203 | 1.735980e-51 | -8.615850e-47 |
| Msa0077610 | Msa0820770 | 0.803810 | 2.918082e-49 | -8.615850e-47 |
| Msa0077610 | Msa0824660 | 0.807234 | 5.585173e-50 | -8.615850e-47 |
| Msa0077610 | Msa0825340 | 0.808071 | 3.708795e-50 | -8.615850e-47 |
| Msa0077610 | Msa0829620 | 0.802038 | 6.779652e-49 | -8.615850e-47 |
| Msa0077610 | Msa0857640 | 0.817417 | 3.334131e-52 | -8.615850e-47 |
| Msa0077610 | Msa0861090 | 0.801847 | 7.423221e-49 | -8.615850e-47 |
| Msa0077610 | Msa0861130 | 0.802282 | 6.041172e-49 | -8.615850e-47 |
| Msa0077610 | Msa0867890 | 0.806588 | 7.646936e-50 | -8.615850e-47 |
| Msa0077610 | Msa0869120 | 0.804176 | 2.449650e-49 | -8.615850e-47 |
| Msa0077610 | Msa0870530 | 0.803004 | 4.286722e-49 | -8.615850e-47 |
| Msa0077610 | Msa0880140 | 0.824810 | 6.595061e-54 | -8.615850e-47 |
| Msa0077610 | Msa0892080 | 0.808430 | 3.108632e-50 | -8.615850e-47 |
| Msa0077610 | Msa0893950 | 0.808965 | 2.389430e-50 | -8.615850e-47 |
| Msa0077610 | Msa0902750 | 0.801658 | 8.114073e-49 | -8.615850e-47 |
| Msa0077610 | Msa0907950 | 0.800049 | 1.728947e-48 | -8.615850e-47 |
| Msa0077610 | Msa0922410 | 0.800637 | 1.312621e-48 | -8.615850e-47 |
| Msa0077610 | Msa0926470 | 0.822661 | 2.102782e-53 | -8.615850e-47 |
| Msa0077610 | Msa0930390 | 0.808830 | 2.553684e-50 | -8.615850e-47 |
| Msa0077610 | Msa0931520 | 0.804233 | 2.383615e-49 | -8.615850e-47 |
| Msa0077610 | Msa0935670 | 0.815064 | 1.119282e-51 | -8.615850e-47 |
| Msa0077610 | Msa0935910 | 0.801205 | 1.004786e-48 | -8.615850e-47 |
| Msa0077610 | Msa0942200 | 0.804224 | 2.393620e-49 | -8.615850e-47 |
| Msa0077610 | Msa0945970 | 0.807587 | 4.700135e-50 | -8.615850e-47 |
| Msa0077610 | Msa0954130 | 0.802741 | 4.859081e-49 | -8.615850e-47 |
| Msa0077610 | Msa0954550 | 0.820675 | 6.051419e-53 | -8.615850e-47 |
| Msa0077610 | Msa0969520 | 0.828705 | 7.750488e-55 | -8.615850e-47 |
| Msa0077610 | Msa0969600 | 0.806403 | 8.367499e-50 | -8.615850e-47 |
| Msa0077610 | Msa0970030 | 0.804274 | 2.337043e-49 | -8.615850e-47 |
| Msa0077610 | Msa0971090 | 0.800677 | 1.288445e-48 | -8.615850e-47 |
| Msa0077610 | Msa0974630 | 0.808275 | 3.354713e-50 | -8.615850e-47 |
| Msa0077610 | Msa0975220 | 0.821125 | 4.766697e-53 | -8.615850e-47 |
| Msa0077610 | Msa1003620 | 0.812645 | 3.819372e-51 | -8.615850e-47 |
| Msa0077610 | Msa1006850 | 0.800799 | 1.216330e-48 | -8.615850e-47 |
| Msa0077610 | Msa1012830 | 0.802784 | 4.759617e-49 | -8.615850e-47 |
| Msa0077610 | Msa1014540 | 0.821143 | 4.721551e-53 | -8.615850e-47 |
| Msa0077610 | Msa1018100 | 0.807582 | 4.710466e-50 | -8.615850e-47 |
| Msa0077610 | Msa1021510 | 0.809732 | 1.636425e-50 | -8.615850e-47 |
| Msa0077610 | Msa1027290 | 0.810933 | 9.009183e-51 | -8.615850e-47 |
| Msa0077610 | Msa1030970 | 0.801913 | 7.194241e-49 | -8.615850e-47 |
| Msa0077610 | Msa1034150 | 0.801382 | 9.244933e-49 | -8.615850e-47 |
| Msa0077610 | Msa1036610 | 0.803250 | 3.812178e-49 | -8.615850e-47 |
| Msa0077610 | Msa1044420 | 0.839139 | 1.893944e-57 | -8.615850e-47 |
| Msa0077610 | Msa1065610 | 0.800328 | 1.517612e-48 | -8.615850e-47 |
| Msa0077610 | Msa1074190 | 0.802223 | 6.213568e-49 | -8.615850e-47 |
| Msa0077610 | Msa1075220 | -0.803783 | 2.956128e-49 | -8.615850e-47 |
| Msa0077610 | Msa1075540 | 0.817181 | 3.767389e-52 | -8.615850e-47 |
| Msa0077610 | Msa1079590 | 0.819476 | 1.138512e-52 | -8.615850e-47 |
| Msa0077610 | Msa1082500 | 0.853846 | 1.824401e-61 | -8.615850e-47 |
| Msa0077610 | Msa1083840 | 0.805373 | 1.377273e-49 | -8.615850e-47 |
| Msa0077610 | Msa1085300 | 0.828276 | 9.834418e-55 | -8.615850e-47 |
| Msa0077610 | Msa1089040 | 0.803124 | 4.049246e-49 | -8.615850e-47 |
| Msa0077610 | Msa1097800 | 0.848801 | 4.863530e-60 | -8.615850e-47 |
| Msa0077610 | Msa1098400 | 0.823136 | 1.629422e-53 | -8.615850e-47 |
| Msa0077610 | Msa1098420 | 0.815871 | 7.404143e-52 | -8.615850e-47 |
| Msa0077610 | Msa1105500 | 0.814114 | 1.816794e-51 | -8.615850e-47 |
| Msa0077610 | Msa1116130 | -0.803161 | 3.978208e-49 | -8.615850e-47 |
| Msa0077610 | Msa1124050 | 0.807917 | 3.998815e-50 | -8.615850e-47 |
| Msa0077610 | Msa1127650 | 0.815143 | 1.075346e-51 | -8.615850e-47 |
| Msa0077610 | Msa1131220 | 0.841260 | 5.293105e-58 | -8.615850e-47 |
| Msa0077610 | Msa1142020 | 0.803708 | 3.063716e-49 | -8.615850e-47 |
| Msa0077610 | Msa1148130 | 0.811598 | 6.460794e-51 | -8.615850e-47 |
| Msa0077610 | Msa1151900 | 0.819372 | 1.202279e-52 | -8.615850e-47 |
| Msa0077610 | Msa1151910 | 0.813099 | 3.037571e-51 | -8.615850e-47 |
| Msa0077610 | Msa1154280 | 0.819045 | 1.427343e-52 | -8.615850e-47 |
| Msa0077610 | Msa1162550 | -0.816973 | 4.195772e-52 | -8.615850e-47 |
| Msa0077610 | Msa1165520 | 0.807113 | 5.924503e-50 | -8.615850e-47 |
| Msa0077610 | Msa1169090 | 0.802361 | 5.817738e-49 | -8.615850e-47 |
| Msa0077610 | Msa1173470 | 0.800562 | 1.359502e-48 | -8.615850e-47 |
| Msa0077610 | Msa1185980 | 0.814997 | 1.158212e-51 | -8.615850e-47 |
| Msa0077610 | Msa1201560 | 0.829505 | 4.959371e-55 | -8.615850e-47 |
| Msa0077610 | Msa1203250 | 0.844740 | 6.270905e-59 | -8.615850e-47 |
| Msa0077610 | Msa1204530 | 0.807776 | 4.284154e-50 | -8.615850e-47 |
| Msa0077610 | Msa1214480 | 0.826107 | 3.252146e-54 | -8.615850e-47 |
| Msa0077610 | Msa1224480 | 0.822920 | 1.829728e-53 | -8.615850e-47 |
| Msa0077610 | Msa1233500 | 0.835325 | 1.792014e-56 | -8.615850e-47 |
| Msa0077610 | Msa1233890 | 0.821899 | 3.158286e-53 | -8.615850e-47 |
| Msa0077610 | Msa1238930 | 0.843272 | 1.551298e-58 | -8.615850e-47 |
| Msa0077610 | Msa1239720 | 0.808975 | 2.378325e-50 | -8.615850e-47 |
| Msa0077610 | Msa1240180 | 0.809414 | 1.915154e-50 | -8.615850e-47 |
| Msa0077610 | Msa1240210 | 0.803775 | 2.967722e-49 | -8.615850e-47 |
| Msa0077610 | Msa1250890 | 0.801692 | 7.986567e-49 | -8.615850e-47 |
| Msa0077610 | Msa1267060 | 0.829423 | 5.190395e-55 | -8.615850e-47 |
| Msa0077610 | Msa1270610 | 0.820967 | 5.183820e-53 | -8.615850e-47 |
| Msa0077610 | Msa1276440 | 0.838580 | 2.643453e-57 | -8.615850e-47 |
| Msa0077610 | Msa1279210 | 0.806269 | 8.930257e-50 | -8.615850e-47 |
| Msa0077610 | Msa1283860 | 0.824516 | 7.735889e-54 | -8.615850e-47 |
| Msa0077610 | Msa1284680 | 0.813110 | 3.021839e-51 | -8.615850e-47 |
| Msa0077610 | Msa1288420 | 0.824187 | 9.246179e-54 | -8.615850e-47 |
| Msa0077610 | Msa1294480 | 0.816705 | 4.819094e-52 | -8.615850e-47 |
| Msa0077610 | Msa1296280 | 0.811630 | 6.358142e-51 | -8.615850e-47 |
| Msa0077610 | Msa1297290 | 0.822754 | 2.000349e-53 | -8.615850e-47 |
| Msa0077610 | Msa1299300 | -0.805892 | 1.071790e-49 | -8.615850e-47 |
| Msa0077610 | Msa1305190 | 0.815186 | 1.051680e-51 | -8.615850e-47 |
| Msa0077610 | Msa1305340 | 0.839538 | 1.492168e-57 | -8.615850e-47 |
| Msa0077610 | Msa1306840 | 0.836536 | 8.834649e-57 | -8.615850e-47 |
| Msa0077610 | Msa1306850 | 0.817608 | 3.019566e-52 | -8.615850e-47 |
| Msa0077610 | Msa1308380 | 0.801860 | 7.375779e-49 | -8.615850e-47 |
| Msa0077610 | Msa1314340 | 0.827585 | 1.442322e-54 | -8.615850e-47 |
| Msa0077610 | Msa1318990 | 0.801739 | 7.810884e-49 | -8.615850e-47 |
| Msa0077610 | Msa1320620 | 0.822602 | 2.169783e-53 | -8.615850e-47 |
| Msa0077610 | Msa1322890 | 0.816191 | 6.281055e-52 | -8.615850e-47 |
| Msa0077610 | Msa1327050 | 0.801723 | 7.871400e-49 | -8.615850e-47 |
| Msa0077610 | Msa1327550 | 0.806545 | 7.807869e-50 | -8.615850e-47 |
| Msa0077610 | Msa1329700 | 0.815717 | 8.010466e-52 | -8.615850e-47 |
| Msa0077610 | Msa1331000 | 0.822628 | 2.139267e-53 | -8.615850e-47 |
| Msa0077610 | Msa1331320 | 0.806034 | 1.000417e-49 | -8.615850e-47 |
| Msa0077610 | Msa1333410 | 0.809595 | 1.751127e-50 | -8.615850e-47 |
| Msa0077610 | Msa1338200 | 0.801936 | 7.116495e-49 | -8.615850e-47 |
| Msa0077610 | Msa1340260 | 0.820869 | 5.460135e-53 | -8.615850e-47 |
| Msa0077610 | Msa1340270 | 0.819777 | 9.721166e-53 | -8.615850e-47 |
| Msa0077610 | Msa1340650 | 0.825507 | 4.514616e-54 | -8.615850e-47 |
| Msa0077610 | Msa1343760 | 0.813408 | 2.598832e-51 | -8.615850e-47 |
| Msa0077610 | Msa1346370 | 0.807206 | 5.660782e-50 | -8.615850e-47 |
| Msa0077610 | Msa1348560 | 0.834299 | 3.248260e-56 | -8.615850e-47 |
| Msa0077610 | Msa1351730 | 0.805188 | 1.505633e-49 | -8.615850e-47 |
| Msa0077610 | Msa1353980 | 0.810033 | 1.409685e-50 | -8.615850e-47 |
| Msa0077610 | Msa1356440 | 0.805446 | 1.329890e-49 | -8.615850e-47 |
| Msa0077610 | Msa1359040 | 0.811806 | 5.823324e-51 | -8.615850e-47 |
| Msa0077610 | Msa1376890 | 0.808411 | 3.138370e-50 | -8.615850e-47 |
| Msa0077610 | Msa1384350 | 0.823657 | 1.230769e-53 | -8.615850e-47 |
| Msa0077610 | Msa1385000 | 0.823849 | 1.109589e-53 | -8.615850e-47 |
| Msa0077610 | Msa1385460 | 0.816356 | 5.767703e-52 | -8.615850e-47 |
| Msa0077610 | Msa1392260 | 0.833975 | 3.915843e-56 | -8.615850e-47 |
| Msa0077610 | Msa1395900 | 0.800129 | 1.665904e-48 | -8.615850e-47 |
| Msa0077610 | Msa1400870 | -0.802462 | 5.546601e-49 | -8.615850e-47 |
| Msa0077610 | Msa1401530 | 0.818997 | 1.463684e-52 | -8.615850e-47 |
| Msa0077610 | Msa1403480 | 0.800790 | 1.221620e-48 | -8.615850e-47 |
| Msa0077610 | Msa1411020 | 0.816592 | 5.106592e-52 | -8.615850e-47 |
| Msa0077610 | Msa1415640 | 0.813392 | 2.619916e-51 | -8.615850e-47 |
| Msa0077610 | Msa1423880 | 0.800508 | 1.394684e-48 | -8.615850e-47 |
| Msa0077610 | Msa1424290 | 0.803466 | 3.439046e-49 | -8.615850e-47 |
| Msa0077610 | Msa1424450 | 0.816122 | 6.508215e-52 | -8.615850e-47 |
| Msa0077610 | Msa1424680 | 0.813663 | 2.283793e-51 | -8.615850e-47 |
| Msa0077610 | Msa1424750 | 0.819377 | 1.199066e-52 | -8.615850e-47 |
| Msa0077610 | Msa1426470 | 0.804814 | 1.802725e-49 | -8.615850e-47 |
| Msa0077610 | Msa1427230 | 0.823769 | 1.158545e-53 | -8.615850e-47 |
| Msa0077610 | Msa1429900 | 0.834843 | 2.370416e-56 | -8.615850e-47 |
| Msa0077610 | Msa1434350 | 0.808705 | 2.715899e-50 | -8.615850e-47 |
| Msa0077610 | Msa1435400 | 0.814421 | 1.553882e-51 | -8.615850e-47 |
| Msa0077610 | Msa1436480 | 0.802322 | 5.928639e-49 | -8.615850e-47 |
| Msa0077610 | Msa1439320 | 0.812635 | 3.838770e-51 | -8.615850e-47 |
| Msa0077610 | Msa1440810 | 0.803236 | 3.838653e-49 | -8.615850e-47 |
| Msa0077610 | Msa1440940 | 0.811155 | 8.062740e-51 | -8.615850e-47 |
| Msa0077610 | Msa1443850 | 0.807757 | 4.323944e-50 | -8.615850e-47 |
| Msa0077610 | Msa1454120 | 0.801560 | 8.501828e-49 | -8.615850e-47 |
| Msa0077610 | Msa1460050 | 0.831065 | 2.061810e-55 | -8.615850e-47 |
| Msa0077610 | Msa1460830 | 0.826035 | 3.383662e-54 | -8.615850e-47 |
| Msa0077610 | Msa1461300 | 0.800470 | 1.419624e-48 | -8.615850e-47 |
| Msa0077610 | Msa1463670 | 0.815562 | 8.674832e-52 | -8.615850e-47 |
| Msa0077610 | Msa1466540 | 0.805145 | 1.537453e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0077610 | MtrunA17_Chr6g0463371 | 76.316 | 38 | 8 | 1 | 99 | 136 | 1 | 37 | 4.19e-11 | 55.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 58 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACCTATTATTTCCGAAAA+TGG | 0.182555 | 1_2:-54583051 | Msa0077610:CDS |
| TTAATTAATACTCAGGAATT+AGG | 0.219728 | 1_2:-54580387 | Msa0077610:intron |
| TTCTTGGGATGATCCATTTC+CGG | 0.229145 | 1_2:-54585747 | Msa0077610:CDS |
| GAGTCTCGACAGCAACTTAA+TGG | 0.240881 | 1_2:+54585770 | None:intergenic |
| CTTTCCACCTCTTTATGTTT+AGG | 0.240922 | 1_2:+54579872 | None:intergenic |
| TAAAGAGGTGGAAAGGAATA+TGG | 0.244687 | 1_2:-54579864 | Msa0077610:three_prime_UTR |
| TTATAGGGTGGAGCCTTTAT+AGG | 0.274138 | 1_2:-54579651 | Msa0077610:three_prime_UTR |
| TTGACAATGGCTTGAAGTTC+CGG | 0.315301 | 1_2:+54583819 | None:intergenic |
| GAAGGTCATTGGAGAATATA+AGG | 0.330932 | 1_2:-54579931 | Msa0077610:three_prime_UTR |
| AAATTGTGCCAAAAGCTTCT+TGG | 0.335598 | 1_2:-54585288 | Msa0077610:CDS |
| GTGTAGTAGAACAATTAGTA+TGG | 0.338655 | 1_2:-54579831 | Msa0077610:three_prime_UTR |
| AATTGTGCCAAAAGCTTCTT+GGG | 0.341672 | 1_2:-54585287 | Msa0077610:CDS |
| TGCATTTCCCAAGAAGCTTT+TGG | 0.342440 | 1_2:+54585280 | None:intergenic |
| GAGAATGAAGGATGACATAA+AGG | 0.345215 | 1_2:-54583084 | Msa0077610:CDS |
| TGCTCGGAGGTCGCCGGAAA+TGG | 0.366381 | 1_2:+54585734 | None:intergenic |
| GTTGCTGTCGAGACTCTTCT+TGG | 0.370381 | 1_2:-54585763 | Msa0077610:CDS |
| ATAAACAAAACAGCCTATAA+AGG | 0.374122 | 1_2:+54579638 | None:intergenic |
| AGGATGGCGTTGGAGTGTTT+TGG | 0.393788 | 1_2:-54580367 | Msa0077610:CDS |
| ATTATTGAACCATCAAAATC+TGG | 0.406563 | 1_2:-54579896 | Msa0077610:three_prime_UTR |
| GAAACAAATGAGAAGGTCAT+TGG | 0.414854 | 1_2:-54579942 | Msa0077610:exon |
| ATGGAGCAGATCTTCCTGTT+TGG | 0.427177 | 1_2:-54583032 | Msa0077610:CDS |
| TCCGAGCATCCGTCGAGTAC+TGG | 0.429654 | 1_2:-54585719 | Msa0077610:CDS |
| GATATAGAGGTGGAAGGAAA+TGG | 0.452347 | 1_2:-54579778 | Msa0077610:three_prime_UTR |
| ACATGTTTCTGTTGCATCCA+TGG | 0.469525 | 1_2:-54583796 | Msa0077610:intron |
| TTTGGCAGTGATCTCCCTGC+TGG | 0.470036 | 1_2:-54580349 | Msa0077610:intron |
| TGGTGTACGGGTTACATCTC+CGG | 0.477444 | 1_2:-54583838 | Msa0077610:CDS |
| AAAGAGGTGGAAAGGAATAT+GGG | 0.480626 | 1_2:-54579863 | Msa0077610:three_prime_UTR |
| TATGATTACCTTGATTATGT+AGG | 0.491010 | 1_2:+54583000 | None:intergenic |
| GTAGGAGTTGATCTCCAAAC+AGG | 0.497937 | 1_2:+54583018 | None:intergenic |
| TTGCTGTCGAGACTCTTCTT+GGG | 0.505566 | 1_2:-54585762 | Msa0077610:CDS |
| TCCAGTACTCGACGGATGCT+CGG | 0.515552 | 1_2:+54585718 | None:intergenic |
| ATCTGGACCTAAACATAAAG+AGG | 0.520948 | 1_2:-54579879 | Msa0077610:three_prime_UTR |
| ATGACATAAAGGAGATAAGA+TGG | 0.525273 | 1_2:-54583073 | Msa0077610:CDS |
| CTCAGGAATTAGGATGGCGT+TGG | 0.530379 | 1_2:-54580377 | Msa0077610:intron |
| GACGGATGCTCGGAGGTCGC+CGG | 0.537445 | 1_2:+54585728 | None:intergenic |
| GATCAACTCCTACATAATCA+AGG | 0.538359 | 1_2:-54583008 | Msa0077610:intron |
| ATGCTTTCTATTGCCTAGGT+AGG | 0.540064 | 1_2:+54579557 | None:intergenic |
| TCAATGACAAAGCGATATAG+AGG | 0.545477 | 1_2:-54579791 | Msa0077610:three_prime_UTR |
| TCGGACAGAGAGGAGGAAGA+TGG | 0.550968 | 1_2:+54585824 | None:intergenic |
| GGAGCATAACACTGCAACAA+AGG | 0.557139 | 1_2:-54579750 | Msa0077610:three_prime_UTR |
| GGTCGTGTTGAAGAGAATGA+AGG | 0.558124 | 1_2:-54583096 | Msa0077610:CDS |
| TCATGTTGCAGGGATGTAGG+TGG | 0.572168 | 1_2:-54585314 | Msa0077610:intron |
| CTAAACATAAAGAGGTGGAA+AGG | 0.577902 | 1_2:-54579871 | Msa0077610:three_prime_UTR |
| TGTAGTAGAACAATTAGTAT+GGG | 0.580023 | 1_2:-54579830 | Msa0077610:three_prime_UTR |
| TGATATGCTTTCTATTGCCT+AGG | 0.591761 | 1_2:+54579553 | None:intergenic |
| TTAATACTCAGGAATTAGGA+TGG | 0.593289 | 1_2:-54580383 | Msa0077610:intron |
| ACATTAAATTAATCCTACCT+AGG | 0.599212 | 1_2:-54579570 | Msa0077610:three_prime_UTR |
| TTGTAGATCGGACAGAGAGG+AGG | 0.610463 | 1_2:+54585817 | None:intergenic |
| CAAAGCGATATAGAGGTGGA+AGG | 0.623526 | 1_2:-54579784 | Msa0077610:three_prime_UTR |
| AACAGAAACATGTTTGACAA+TGG | 0.625197 | 1_2:+54583806 | None:intergenic |
| AGTCGGATAGAATTGTAGAT+CGG | 0.627874 | 1_2:+54585805 | None:intergenic |
| AGGTGGAAGGAAATGGACAT+TGG | 0.628852 | 1_2:-54579771 | Msa0077610:three_prime_UTR |
| GAATTGTAGATCGGACAGAG+AGG | 0.640211 | 1_2:+54585814 | None:intergenic |
| TGGACCTAAACATAAAGAGG+TGG | 0.642850 | 1_2:-54579876 | Msa0077610:three_prime_UTR |
| ATCGGAGATCCAGTACTCGA+CGG | 0.647965 | 1_2:+54585710 | None:intergenic |
| ATGACAAAGCGATATAGAGG+TGG | 0.648420 | 1_2:-54579788 | Msa0077610:three_prime_UTR |
| GATGATGGTACTGACCAGCA+GGG | 0.714852 | 1_2:+54580335 | None:intergenic |
| AGTACTCGACGGATGCTCGG+AGG | 0.722695 | 1_2:+54585721 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATAAAATCCAATATA+CGG | + | chr1_2:54579704-54579723 | None:intergenic | 10.0% |
| !! | GAATAAAATAAAAAGAAATA+AGG | + | chr1_2:54579951-54579970 | None:intergenic | 10.0% |
| !!! | CTGTATATTATATTTTTTTA+AGG | - | chr1_2:54579970-54579989 | Msa0077610:intron | 10.0% |
| !!! | ATTTGAAAATCTATTTTAAA+GGG | + | chr1_2:54580795-54580814 | None:intergenic | 10.0% |
| !!! | TTTTAGGAAATTTTTATATT+CGG | - | chr1_2:54581656-54581675 | Msa0077610:intron | 10.0% |
| !! | AAATATAATTTATAATAACG+AGG | + | chr1_2:54584122-54584141 | None:intergenic | 10.0% |
| !!! | GTTTAAGTTTAAATATAATT+AGG | - | chr1_2:54585151-54585170 | Msa0077610:intron | 10.0% |
| !!! | TTTTTATTTTTTTGCTTTAT+AGG | - | chr1_2:54585707-54585726 | Msa0077610:CDS | 10.0% |
| !!! | TTTTATTTTTTTGCTTTATA+GGG | - | chr1_2:54585708-54585727 | Msa0077610:CDS | 10.0% |
| !!! | TGTTTTTTTGTTATGAAATT+AGG | - | chr1_2:54579849-54579868 | Msa0077610:three_prime_UTR | 15.0% |
| !!! | CACATTTTTTATGTTAAAAA+AGG | + | chr1_2:54580274-54580293 | None:intergenic | 15.0% |
| !!! | GATTTGAAAATCTATTTTAA+AGG | + | chr1_2:54580796-54580815 | None:intergenic | 15.0% |
| !! | TAAAAAAAACACAACAATTT+GGG | + | chr1_2:54581641-54581660 | None:intergenic | 15.0% |
| !! | CAGTTTATAACTAATTTATT+CGG | + | chr1_2:54581758-54581777 | None:intergenic | 15.0% |
| !!! | GTTCAAAATTTATTTTGAAA+GGG | + | chr1_2:54582601-54582620 | None:intergenic | 15.0% |
| !!! | AGTTCAAAATTTATTTTGAA+AGG | + | chr1_2:54582602-54582621 | None:intergenic | 15.0% |
| !!! | ACACTATCAAATTTAAAATA+GGG | + | chr1_2:54583206-54583225 | None:intergenic | 15.0% |
| !!! | AACACTATCAAATTTAAAAT+AGG | + | chr1_2:54583207-54583226 | None:intergenic | 15.0% |
| !!! | TATTTTAAATTTGATAGTGT+TGG | - | chr1_2:54583206-54583225 | Msa0077610:intron | 15.0% |
| !!! | AACTTATTTTGTCTAAAATA+TGG | - | chr1_2:54583239-54583258 | Msa0077610:intron | 15.0% |
| !! | TTAGTTAAAAAATATGATGT+AGG | - | chr1_2:54583382-54583401 | Msa0077610:intron | 15.0% |
| !! | TAGTTAAAAAATATGATGTA+GGG | - | chr1_2:54583383-54583402 | Msa0077610:intron | 15.0% |
| !!! | AATATTTTTAAAGAATGCAT+AGG | - | chr1_2:54584525-54584544 | Msa0077610:intron | 15.0% |
| !!! | ATATTTTTAAAGAATGCATA+GGG | - | chr1_2:54584526-54584545 | Msa0077610:intron | 15.0% |
| !!! | GAAACAGAATAATATTTTAT+TGG | + | chr1_2:54584674-54584693 | None:intergenic | 15.0% |
| !! | TGAATATGAAAATAAAAGAA+TGG | - | chr1_2:54584869-54584888 | Msa0077610:intron | 15.0% |
| !! | TCATAAAAAAAACCGTATAT+TGG | - | chr1_2:54579689-54579708 | Msa0077610:three_prime_UTR | 20.0% |
| !!! | TTTATTTTTTTTCATGTTGC+AGG | - | chr1_2:54580049-54580068 | Msa0077610:intron | 20.0% |
| !!! | TTATTTTTTTTCATGTTGCA+GGG | - | chr1_2:54580050-54580069 | Msa0077610:intron | 20.0% |
| !!! | TTTCTTTTTAACCAAAAAGA+GGG | + | chr1_2:54580190-54580209 | None:intergenic | 20.0% |
| !!! | AAAAAAGGTTTTGATATTAC+AGG | - | chr1_2:54580241-54580260 | Msa0077610:intron | 20.0% |
| !!! | ATAAGTAGTTATTTCAAAAG+TGG | + | chr1_2:54580574-54580593 | None:intergenic | 20.0% |
| !!! | AATAACCAGTTTTCAAAAAA+AGG | - | chr1_2:54580630-54580649 | Msa0077610:intron | 20.0% |
| !!! | ATAACCAGTTTTCAAAAAAA+GGG | - | chr1_2:54580631-54580650 | Msa0077610:intron | 20.0% |
| !! | AATCTTCATAAAGAAAATCA+AGG | - | chr1_2:54580733-54580752 | Msa0077610:intron | 20.0% |
| !!! | AAACATAGCATTTAAAACAA+GGG | + | chr1_2:54580823-54580842 | None:intergenic | 20.0% |
| !!! | TAAACATAGCATTTAAAACA+AGG | + | chr1_2:54580824-54580843 | None:intergenic | 20.0% |
| !! | ATATGTTAAAATATAGTAGC+TGG | - | chr1_2:54580908-54580927 | Msa0077610:intron | 20.0% |
| !! | CTTAGAAGAAAAAAATAAAG+AGG | + | chr1_2:54581225-54581244 | None:intergenic | 20.0% |
| !! | AAAAGATTTAAAAACGCAAA+AGG | - | chr1_2:54581268-54581287 | Msa0077610:intron | 20.0% |
| !!! | AGTTTTCTTAAGTTATTCAT+AGG | + | chr1_2:54581412-54581431 | None:intergenic | 20.0% |
| !!! | TTTATTTTCATTTTCAGCTA+TGG | - | chr1_2:54581516-54581535 | Msa0077610:intron | 20.0% |
| !! | CTAAAAAAAACACAACAATT+TGG | + | chr1_2:54581642-54581661 | None:intergenic | 20.0% |
| !!! | CAAATTGTTGTGTTTTTTTT+AGG | - | chr1_2:54581640-54581659 | Msa0077610:intron | 20.0% |
| !! | TGTCTGTATCTATAAAATAA+TGG | - | chr1_2:54581844-54581863 | Msa0077610:intron | 20.0% |
| !! | GTCTGTATCTATAAAATAAT+GGG | - | chr1_2:54581845-54581864 | Msa0077610:intron | 20.0% |
| !!! | AAAATTTGAGTATTTTGCTT+TGG | + | chr1_2:54582185-54582204 | None:intergenic | 20.0% |
| !! | ACAATAACATTCAATAGAAT+TGG | + | chr1_2:54582432-54582451 | None:intergenic | 20.0% |
| !! | TATCATTATAAAGTATGCAA+CGG | + | chr1_2:54582897-54582916 | None:intergenic | 20.0% |
| !!! | CACTATCAAATTTAAAATAG+GGG | + | chr1_2:54583205-54583224 | None:intergenic | 20.0% |
| !!! | TTTTAGACAAAATAAGTTTG+TGG | + | chr1_2:54583237-54583256 | None:intergenic | 20.0% |
| !! | TATTTAACCAACCAATATTA+CGG | + | chr1_2:54583485-54583504 | None:intergenic | 20.0% |
| !! | ATATTAAAATGACATTTGTG+AGG | - | chr1_2:54583554-54583573 | Msa0077610:intron | 20.0% |
| !! | TAGAGAAGAATAAATCATTT+AGG | + | chr1_2:54583954-54583973 | None:intergenic | 20.0% |
| !! | AAAACAGTACTTACTAATTA+AGG | + | chr1_2:54584247-54584266 | None:intergenic | 20.0% |
| !!! | TATTTTTAAAGAATGCATAG+GGG | - | chr1_2:54584527-54584546 | Msa0077610:intron | 20.0% |
| !! | TATAAAAAGAAGACTTCATT+AGG | + | chr1_2:54584564-54584583 | None:intergenic | 20.0% |
| !!! | TCTTTTATTTTCATATTCAG+AGG | + | chr1_2:54584868-54584887 | None:intergenic | 20.0% |
| !! | AAATAAATTTCATCAAGATC+TGG | + | chr1_2:54584947-54584966 | None:intergenic | 20.0% |
| !! | TTAATTAATACTCAGGAATT+AGG | - | chr1_2:54584987-54585006 | Msa0077610:intron | 20.0% |
| !! | AAGATATTATCATACAAAGT+TGG | + | chr1_2:54585129-54585148 | None:intergenic | 20.0% |
| !! | GGATGTATATTAGAAATATA+AGG | - | chr1_2:54585223-54585242 | Msa0077610:intron | 20.0% |
| !! | TTGAAGATGGATAAAATTAT+TGG | + | chr1_2:54585380-54585399 | None:intergenic | 20.0% |
| !!! | TATTTTACAGCACATTTAAT+AGG | + | chr1_2:54585771-54585790 | None:intergenic | 20.0% |
| !!! | ACGGTTTTTTTTATGAGAAT+CGG | + | chr1_2:54579685-54579704 | None:intergenic | 25.0% |
| ! | ACAAAATCAAACTACGATTA+TGG | + | chr1_2:54579810-54579829 | None:intergenic | 25.0% |
| ! | AGTTAGTATTTATTTCCTTG+CGG | - | chr1_2:54579918-54579937 | Msa0077610:three_prime_UTR | 25.0% |
| ! | TAGGAAAGGACATAAAAAAA+GGG | + | chr1_2:54580160-54580179 | None:intergenic | 25.0% |
| ! | ATAGGAAAGGACATAAAAAA+AGG | + | chr1_2:54580161-54580180 | None:intergenic | 25.0% |
| !! | TTCTTTTTAACCAAAAAGAG+GGG | + | chr1_2:54580189-54580208 | None:intergenic | 25.0% |
| !! | CTTTCTTTTTAACCAAAAAG+AGG | + | chr1_2:54580191-54580210 | None:intergenic | 25.0% |
| !!! | CTTTTTGGTTAAAAAGAAAG+CGG | - | chr1_2:54580191-54580210 | Msa0077610:intron | 25.0% |
| ! | ACTGATCTTGTATAGAAAAA+AGG | - | chr1_2:54580226-54580245 | Msa0077610:intron | 25.0% |
| ! | TGATGTTAAAACAAAAACCA+AGG | + | chr1_2:54580371-54580390 | None:intergenic | 25.0% |
| !!! | TTTTCGTGATGGAAAATAAA+TGG | - | chr1_2:54580439-54580458 | Msa0077610:intron | 25.0% |
| !! | AACATAGCATTTAAAACAAG+GGG | + | chr1_2:54580822-54580841 | None:intergenic | 25.0% |
| ! | AGCTCAGATAAAACAATATA+CGG | + | chr1_2:54580960-54580979 | None:intergenic | 25.0% |
| !!! | TATAGATCAAGGTTGATAAA+GGG | + | chr1_2:54581043-54581062 | None:intergenic | 25.0% |
| !!! | TTATAGATCAAGGTTGATAA+AGG | + | chr1_2:54581044-54581063 | None:intergenic | 25.0% |
| ! | CAATGATGAATTATAGATCA+AGG | + | chr1_2:54581054-54581073 | None:intergenic | 25.0% |
| !!! | TAAATCTTTTTTGCAAGAGT+TGG | + | chr1_2:54581258-54581277 | None:intergenic | 25.0% |
| ! | TTTAAAAACGCAAAAGGTAA+TGG | - | chr1_2:54581274-54581293 | Msa0077610:intron | 25.0% |
| ! | ATAAATGTCATCTTTACATG+AGG | + | chr1_2:54581501-54581520 | None:intergenic | 25.0% |
| ! | TTTCTATATACAAACAAGAG+TGG | + | chr1_2:54581612-54581631 | None:intergenic | 25.0% |
| ! | ATACCTATTTATTATACACG+TGG | - | chr1_2:54581875-54581894 | Msa0077610:intron | 25.0% |
| ! | TATCCACGTGTATAATAAAT+AGG | + | chr1_2:54581881-54581900 | None:intergenic | 25.0% |
| ! | GAAAATTGATGAAACAATAC+AGG | - | chr1_2:54582254-54582273 | Msa0077610:intron | 25.0% |
| ! | TATGATTACCTTGATTATGT+AGG | + | chr1_2:54582377-54582396 | None:intergenic | 25.0% |
| ! | ATTCAATAGAATTGGACAAA+AGG | + | chr1_2:54582424-54582443 | None:intergenic | 25.0% |
| !! | GCATTTATTTAACTTTGCAA+GGG | + | chr1_2:54582806-54582825 | None:intergenic | 25.0% |
| !! | TGCATTTATTTAACTTTGCA+AGG | + | chr1_2:54582807-54582826 | None:intergenic | 25.0% |
| ! | ATGGAAATATTTCACAAATG+AGG | + | chr1_2:54582941-54582960 | None:intergenic | 25.0% |
| ! | ATAGGCTGATATAAACTATA+GGG | + | chr1_2:54582965-54582984 | None:intergenic | 25.0% |
| ! | AATAGGCTGATATAAACTAT+AGG | + | chr1_2:54582966-54582985 | None:intergenic | 25.0% |
| ! | TACTTCTCTGTCAAATTATT+TGG | - | chr1_2:54583066-54583085 | Msa0077610:CDS | 25.0% |
| ! | CAAATTATTTGGTTATCTCA+TGG | - | chr1_2:54583077-54583096 | Msa0077610:CDS | 25.0% |
| ! | ATGAAAAAAGGGATGAAAAA+GGG | + | chr1_2:54583164-54583183 | None:intergenic | 25.0% |
| ! | TCTGCAAAATGATGAAAAAA+GGG | + | chr1_2:54583175-54583194 | None:intergenic | 25.0% |
| !! | GTTTCAAAATCTTACAGTTT+TGG | + | chr1_2:54583410-54583429 | None:intergenic | 25.0% |
| !!! | TTTTGGCTTAATTGTAGTTT+TGG | + | chr1_2:54583440-54583459 | None:intergenic | 25.0% |
| ! | ACAATTAAGCCAAAACTAAT+AGG | - | chr1_2:54583445-54583464 | Msa0077610:intron | 25.0% |
| !!! | CAATTATCACCTATTAGTTT+TGG | + | chr1_2:54583457-54583476 | None:intergenic | 25.0% |
| !! | AACTTTTTATGTAAGTTGTG+AGG | - | chr1_2:54583585-54583604 | Msa0077610:intron | 25.0% |
| ! | GAAATTCATAAAGACAAATC+TGG | - | chr1_2:54583703-54583722 | Msa0077610:intron | 25.0% |
| !!! | TACATGACTTCATTTTTGAT+TGG | - | chr1_2:54583813-54583832 | Msa0077610:CDS | 25.0% |
| !! | AGTATCAAACTTTTACTTCA+TGG | + | chr1_2:54583855-54583874 | None:intergenic | 25.0% |
| !!! | GATACTGTTTTTGATACAAT+TGG | - | chr1_2:54583869-54583888 | Msa0077610:intron | 25.0% |
| !!! | TTATTTTAGTGTTGTTCAGA+AGG | + | chr1_2:54584092-54584111 | None:intergenic | 25.0% |
| ! | TATACATCAAGTTTGATGAA+GGG | + | chr1_2:54584203-54584222 | None:intergenic | 25.0% |
| !!! | GTAAGTACTGTTTTATTCTT+TGG | - | chr1_2:54584253-54584272 | Msa0077610:intron | 25.0% |
| ! | TTATCTTACAACAGAAAAAG+AGG | + | chr1_2:54584451-54584470 | None:intergenic | 25.0% |
| ! | ACTATAACATCTTAATGAAG+AGG | + | chr1_2:54584715-54584734 | None:intergenic | 25.0% |
| !! | TTCAGTTACACTTCATTTTA+TGG | + | chr1_2:54584833-54584852 | None:intergenic | 25.0% |
| ! | ATGAAAATAAAAGAATGGAG+AGG | - | chr1_2:54584874-54584893 | Msa0077610:intron | 25.0% |
| ! | TTGTGTCTTAATTAATACTC+AGG | - | chr1_2:54584980-54584999 | Msa0077610:intron | 25.0% |
| ! | AGAAATGCTAAACAAAACAA+TGG | + | chr1_2:54585064-54585083 | None:intergenic | 25.0% |
| !! | ATCATACTTTTCTCCAAATA+TGG | - | chr1_2:54585181-54585200 | Msa0077610:intron | 25.0% |
| ! | TCTAATATACATCCTTCTAA+TGG | + | chr1_2:54585217-54585236 | None:intergenic | 25.0% |
| ! | ATGAGAAACAACAAATATGA+AGG | + | chr1_2:54585317-54585336 | None:intergenic | 25.0% |
| ! | GGGAATACACAAAAAAAAAA+AGG | - | chr1_2:54585410-54585429 | Msa0077610:intron | 25.0% |
| ! | AAAAAAGGAAACAAATGAGA+AGG | - | chr1_2:54585425-54585444 | Msa0077610:intron | 25.0% |
| ! | ATTATTGAACCATCAAAATC+TGG | - | chr1_2:54585478-54585497 | Msa0077610:intron | 25.0% |
| ! | TGTAGTAGAACAATTAGTAT+GGG | - | chr1_2:54585544-54585563 | Msa0077610:intron | 25.0% |
| !!! | TATTTTTTTGCTTTATAGGG+TGG | - | chr1_2:54585711-54585730 | Msa0077610:CDS | 25.0% |
| ! | ATAAACAAAACAGCCTATAA+AGG | + | chr1_2:54585739-54585758 | None:intergenic | 25.0% |
| ! | ACATTAAATTAATCCTACCT+AGG | - | chr1_2:54585804-54585823 | Msa0077610:CDS | 25.0% |
| AATGGTTTCGAAAAATGAGT+CGG | + | chr1_2:54579589-54579608 | None:intergenic | 30.0% | |
| ! | TTTGCACGGTCAAAATATTT+TGG | - | chr1_2:54579770-54579789 | Msa0077610:three_prime_UTR | 30.0% |
| ! | TTGCACGGTCAAAATATTTT+GGG | - | chr1_2:54579771-54579790 | Msa0077610:three_prime_UTR | 30.0% |
| AAATAAGGAAAAAATCCGCA+AGG | + | chr1_2:54579936-54579955 | None:intergenic | 30.0% | |
| TATAACCTACTTGTCTAATG+TGG | - | chr1_2:54580000-54580019 | Msa0077610:intron | 30.0% | |
| ATATTCCACATTAGACAAGT+AGG | + | chr1_2:54580008-54580027 | None:intergenic | 30.0% | |
| TGCAAGTAATGGCTAAATAA+CGG | - | chr1_2:54580113-54580132 | Msa0077610:intron | 30.0% | |
| AGGAAAGGACATAAAAAAAG+GGG | + | chr1_2:54580159-54580178 | None:intergenic | 30.0% | |
| TAATGAATTTGTATGATCGC+TGG | - | chr1_2:54580338-54580357 | Msa0077610:intron | 30.0% | |
| !! | GTTTTAACATCATAGTGATG+AGG | - | chr1_2:54580379-54580398 | Msa0077610:intron | 30.0% |
| TATATCGCAACTAACTTTGT+GGG | + | chr1_2:54580483-54580502 | None:intergenic | 30.0% | |
| ! | TAGTTATTTCAAAAGTGGTG+CGG | + | chr1_2:54580569-54580588 | None:intergenic | 30.0% |
| TTTGAAAACTGGTTATTTGC+AGG | + | chr1_2:54580627-54580646 | None:intergenic | 30.0% | |
| !!! | ATAGCCCTTTTTTTGAAAAC+TGG | + | chr1_2:54580638-54580657 | None:intergenic | 30.0% |
| ! | ATTTGTCTATTTGCTAGCAA+TGG | - | chr1_2:54581102-54581121 | Msa0077610:intron | 30.0% |
| !!! | AATGGATACGATTTTGAGTT+TGG | - | chr1_2:54581120-54581139 | Msa0077610:intron | 30.0% |
| GAAGAAGCAATTGTAATACA+AGG | - | chr1_2:54581150-54581169 | Msa0077610:intron | 30.0% | |
| AATATGCTCAAAGAATGCAT+TGG | - | chr1_2:54581305-54581324 | Msa0077610:intron | 30.0% | |
| ATATGCTCAAAGAATGCATT+GGG | - | chr1_2:54581306-54581325 | Msa0077610:intron | 30.0% | |
| AACAGAAACATGTTTGACAA+TGG | + | chr1_2:54581571-54581590 | None:intergenic | 30.0% | |
| TATACAAACAAGAGTGGAAA+AGG | + | chr1_2:54581606-54581625 | None:intergenic | 30.0% | |
| !! | AAACACAACAATTTGGGTTT+TGG | + | chr1_2:54581635-54581654 | None:intergenic | 30.0% |
| AATTGATGAAACAATACAGG+AGG | - | chr1_2:54582257-54582276 | Msa0077610:intron | 30.0% | |
| ATGACATAAAGGAGATAAGA+TGG | - | chr1_2:54582301-54582320 | Msa0077610:intron | 30.0% | |
| AGGTCAACATATGATATGTT+GGG | + | chr1_2:54582404-54582423 | None:intergenic | 30.0% | |
| AAGGTCAACATATGATATGT+TGG | + | chr1_2:54582405-54582424 | None:intergenic | 30.0% | |
| AAGTTTAACAAAGAGCTCTA+CGG | + | chr1_2:54582509-54582528 | None:intergenic | 30.0% | |
| GTTAAACTTAATTTACACCC+TGG | - | chr1_2:54582520-54582539 | Msa0077610:intron | 30.0% | |
| ! | CTTTTTATGCAATATGTCCA+GGG | + | chr1_2:54582540-54582559 | None:intergenic | 30.0% |
| ! | ACTTTTTATGCAATATGTCC+AGG | + | chr1_2:54582541-54582560 | None:intergenic | 30.0% |
| GAAATGCATAAACAACATGA+AGG | - | chr1_2:54582715-54582734 | Msa0077610:intron | 30.0% | |
| GAAATATTTCACAAATGAGG+AGG | + | chr1_2:54582938-54582957 | None:intergenic | 30.0% | |
| CTGATATAAACTATAGGGTA+TGG | + | chr1_2:54582960-54582979 | None:intergenic | 30.0% | |
| !!! | AGAAGATAGTTTTGATAGCA+AGG | + | chr1_2:54583104-54583123 | None:intergenic | 30.0% |
| AAAACTATCTTCTGATACCA+AGG | - | chr1_2:54583111-54583130 | Msa0077610:intron | 30.0% | |
| CAAGGATATACTCTTAATTG+CGG | - | chr1_2:54583129-54583148 | Msa0077610:intron | 30.0% | |
| ! | TATACTCTTAATTGCGGTTT+TGG | - | chr1_2:54583135-54583154 | Msa0077610:intron | 30.0% |
| TGAAAAAAGGGATGAAAAAG+GGG | + | chr1_2:54583163-54583182 | None:intergenic | 30.0% | |
| GATGAAAAAAGGGATGAAAA+AGG | + | chr1_2:54583165-54583184 | None:intergenic | 30.0% | |
| CTCTGCAAAATGATGAAAAA+AGG | + | chr1_2:54583176-54583195 | None:intergenic | 30.0% | |
| AGACAAAATAAGTTTGTGGT+GGG | + | chr1_2:54583233-54583252 | None:intergenic | 30.0% | |
| TAGACAAAATAAGTTTGTGG+TGG | + | chr1_2:54583234-54583253 | None:intergenic | 30.0% | |
| !!! | ACTGTAAGATTTTGAAACAG+CGG | - | chr1_2:54583412-54583431 | Msa0077610:intron | 30.0% |
| TAATTGCAACACCGTAATAT+TGG | - | chr1_2:54583471-54583490 | Msa0077610:intron | 30.0% | |
| GGTTAAATATGTTAGACATC+TGG | - | chr1_2:54583496-54583515 | Msa0077610:intron | 30.0% | |
| ! | ATCTGGTTAACTCTAGAAAA+AGG | - | chr1_2:54583513-54583532 | Msa0077610:intron | 30.0% |
| !! | ATGACTTCATTTTTGATTGG+CGG | - | chr1_2:54583816-54583835 | Msa0077610:CDS | 30.0% |
| GAAAGTAATCATGTTCCTTA+TGG | - | chr1_2:54584156-54584175 | Msa0077610:intron | 30.0% | |
| TTCCTTATGGAATTCATCAT+AGG | - | chr1_2:54584169-54584188 | Msa0077610:intron | 30.0% | |
| ATCCTATGATGAATTCCATA+AGG | + | chr1_2:54584174-54584193 | None:intergenic | 30.0% | |
| CTATACATCAAGTTTGATGA+AGG | + | chr1_2:54584204-54584223 | None:intergenic | 30.0% | |
| GTGCTTGTTTAAATTCATTG+TGG | - | chr1_2:54584275-54584294 | Msa0077610:intron | 30.0% | |
| TTTGCTTTGTAACTTAGCAA+TGG | - | chr1_2:54584321-54584340 | Msa0077610:intron | 30.0% | |
| !! | AAAGAGGTATTGGATAGAAA+AGG | + | chr1_2:54584435-54584454 | None:intergenic | 30.0% |
| ! | TACAACAGAAAAAGAGGTAT+TGG | + | chr1_2:54584445-54584464 | None:intergenic | 30.0% |
| ! | CTTTCTAAAAACATCGAGAT+AGG | - | chr1_2:54584483-54584502 | Msa0077610:intron | 30.0% |
| TAAAAACATCGAGATAGGAA+AGG | - | chr1_2:54584488-54584507 | Msa0077610:intron | 30.0% | |
| TTCCAACTGTAAAAATGAAG+AGG | - | chr1_2:54584786-54584805 | Msa0077610:intron | 30.0% | |
| !! | ATCCTCTTCATTTTTACAGT+TGG | + | chr1_2:54584791-54584810 | None:intergenic | 30.0% |
| AAAAGAATGGAGAGGTTAAA+AGG | - | chr1_2:54584882-54584901 | Msa0077610:intron | 30.0% | |
| TTAATACTCAGGAATTAGGA+TGG | - | chr1_2:54584991-54585010 | Msa0077610:intron | 30.0% | |
| CTAAACAAAACAATGGATGA+TGG | + | chr1_2:54585057-54585076 | None:intergenic | 30.0% | |
| TGGAAGATGAATTCCATATT+TGG | + | chr1_2:54585197-54585216 | None:intergenic | 30.0% | |
| CTGAGAAGCAAAAAATGAAT+AGG | - | chr1_2:54585261-54585280 | Msa0077610:intron | 30.0% | |
| ACCTTTGTACACAATTTATC+TGG | - | chr1_2:54585287-54585306 | Msa0077610:CDS | 30.0% | |
| ACCAGATAAATTGTGTACAA+AGG | + | chr1_2:54585291-54585310 | None:intergenic | 30.0% | |
| GAAAAGCTATTACATGAGAA+AGG | + | chr1_2:54585358-54585377 | None:intergenic | 30.0% | |
| GTGTAGTAGAACAATTAGTA+TGG | - | chr1_2:54585543-54585562 | Msa0077610:intron | 30.0% | |
| AGTCGGATAGAATTGTAGAT+CGG | + | chr1_2:54579572-54579591 | None:intergenic | 35.0% | |
| ! | TGCACGGTCAAAATATTTTG+GGG | - | chr1_2:54579772-54579791 | Msa0077610:three_prime_UTR | 35.0% |
| AAATTGTGCCAAAAGCTTCT+TGG | - | chr1_2:54580086-54580105 | Msa0077610:intron | 35.0% | |
| AATTGTGCCAAAAGCTTCTT+GGG | - | chr1_2:54580087-54580106 | Msa0077610:intron | 35.0% | |
| TTCTTGGGAAATGCAAGTAA+TGG | - | chr1_2:54580102-54580121 | Msa0077610:intron | 35.0% | |
| GTATATCGCAACTAACTTTG+TGG | + | chr1_2:54580484-54580503 | None:intergenic | 35.0% | |
| ATACAATCTGTGTTCGCATT+GGG | + | chr1_2:54580506-54580525 | None:intergenic | 35.0% | |
| AATACAATCTGTGTTCGCAT+TGG | + | chr1_2:54580507-54580526 | None:intergenic | 35.0% | |
| CGAACACAGATTGTATTTGT+TGG | - | chr1_2:54580510-54580529 | Msa0077610:intron | 35.0% | |
| ! | GGTGTTGAATACAAAAAGAG+TGG | + | chr1_2:54580599-54580618 | None:intergenic | 35.0% |
| ACTGGTTATTTGCAGGTTAT+TGG | + | chr1_2:54580620-54580639 | None:intergenic | 35.0% | |
| ! | GTAGTCTAATGCTCTGTTTT+AGG | - | chr1_2:54580849-54580868 | Msa0077610:intron | 35.0% |
| AATGATGAAGCATAAGCATG+TGG | - | chr1_2:54581178-54581197 | Msa0077610:intron | 35.0% | |
| ATGATGAAGCATAAGCATGT+GGG | - | chr1_2:54581179-54581198 | Msa0077610:intron | 35.0% | |
| AAAGAGGTAATAGACAGAAG+AGG | + | chr1_2:54581209-54581228 | None:intergenic | 35.0% | |
| ! | TCATTTTCAGCTATGGTGTA+CGG | - | chr1_2:54581523-54581542 | Msa0077610:intron | 35.0% |
| ATAGCGTTCAAAGCAGAAAT+TGG | + | chr1_2:54581781-54581800 | None:intergenic | 35.0% | |
| ! | TCTGCTTTGAACGCTATTAT+CGG | - | chr1_2:54581784-54581803 | Msa0077610:intron | 35.0% |
| AATAAAATTTGTCACGGGCA+CGG | + | chr1_2:54581922-54581941 | None:intergenic | 35.0% | |
| CGACGAATAAAATTTGTCAC+GGG | + | chr1_2:54581927-54581946 | None:intergenic | 35.0% | |
| CCGACGAATAAAATTTGTCA+CGG | + | chr1_2:54581928-54581947 | None:intergenic | 35.0% | |
| ! | CCGTGACAAATTTTATTCGT+CGG | - | chr1_2:54581925-54581944 | Msa0077610:intron | 35.0% |
| CCCTCAACATTTGATATATG+CGG | + | chr1_2:54582008-54582027 | None:intergenic | 35.0% | |
| CCGCATATATCAAATGTTGA+GGG | - | chr1_2:54582005-54582024 | Msa0077610:intron | 35.0% | |
| GAGAATGAAGGATGACATAA+AGG | - | chr1_2:54582290-54582309 | Msa0077610:intron | 35.0% | |
| GCACCTATTATTTCCGAAAA+TGG | - | chr1_2:54582323-54582342 | Msa0077610:intron | 35.0% | |
| ! | GCTCCATTTTCGGAAATAAT+AGG | + | chr1_2:54582329-54582348 | None:intergenic | 35.0% |
| GATCAACTCCTACATAATCA+AGG | - | chr1_2:54582366-54582385 | Msa0077610:intron | 35.0% | |
| CAACATATGATATGTTGGGT+GGG | + | chr1_2:54582400-54582419 | None:intergenic | 35.0% | |
| TCAACATATGATATGTTGGG+TGG | + | chr1_2:54582401-54582420 | None:intergenic | 35.0% | |
| AAATCACAACAGTAGCATGA+AGG | + | chr1_2:54582663-54582682 | None:intergenic | 35.0% | |
| ! | ACTCTTTGCTAGCTTAGTTA+TGG | + | chr1_2:54582749-54582768 | None:intergenic | 35.0% |
| ! | TAAGCTAGCAAAGAGTATGA+AGG | - | chr1_2:54582753-54582772 | Msa0077610:intron | 35.0% |
| ! | AAGCTAGCAAAGAGTATGAA+GGG | - | chr1_2:54582754-54582773 | Msa0077610:intron | 35.0% |
| CAGGAATCATCTATGTTGAT+CGG | + | chr1_2:54582830-54582849 | None:intergenic | 35.0% | |
| CGTAGACTTAAAATACAAGC+AGG | + | chr1_2:54582849-54582868 | None:intergenic | 35.0% | |
| ATATTTCACAAATGAGGAGG+AGG | + | chr1_2:54582935-54582954 | None:intergenic | 35.0% | |
| ! | CGCAATTAAGAGTATATCCT+TGG | + | chr1_2:54583131-54583150 | None:intergenic | 35.0% |
| GAAAAAAGGGATGAAAAAGG+GGG | + | chr1_2:54583162-54583181 | None:intergenic | 35.0% | |
| GGTGATATGACATGCTTTAA+AGG | - | chr1_2:54583260-54583279 | Msa0077610:intron | 35.0% | |
| !!! | CTGTAAGATTTTGAAACAGC+GGG | - | chr1_2:54583413-54583432 | Msa0077610:intron | 35.0% |
| !! | TGATTGGCGGATTTATGAAT+TGG | - | chr1_2:54583829-54583848 | Msa0077610:CDS | 35.0% |
| GGAATTCATCATAGGATTAG+CGG | - | chr1_2:54584177-54584196 | Msa0077610:intron | 35.0% | |
| GGAATTCATCTTCCATTAGA+AGG | - | chr1_2:54585202-54585221 | Msa0077610:intron | 35.0% | |
| ! | TCCATCTTCAAATTTTCTGC+AGG | - | chr1_2:54585389-54585408 | Msa0077610:intron | 35.0% |
| ! | CCATCTTCAAATTTTCTGCA+GGG | - | chr1_2:54585390-54585409 | Msa0077610:intron | 35.0% |
| GAAACAAATGAGAAGGTCAT+TGG | - | chr1_2:54585432-54585451 | Msa0077610:intron | 35.0% | |
| GAAGGTCATTGGAGAATATA+AGG | - | chr1_2:54585443-54585462 | Msa0077610:intron | 35.0% | |
| ! | TGTTTAGGTCCAGATTTTGA+TGG | + | chr1_2:54585490-54585509 | None:intergenic | 35.0% |
| ATCTGGACCTAAACATAAAG+AGG | - | chr1_2:54585495-54585514 | Msa0077610:intron | 35.0% | |
| CTTTCCACCTCTTTATGTTT+AGG | + | chr1_2:54585505-54585524 | None:intergenic | 35.0% | |
| CTAAACATAAAGAGGTGGAA+AGG | - | chr1_2:54585503-54585522 | Msa0077610:intron | 35.0% | |
| TAAAGAGGTGGAAAGGAATA+TGG | - | chr1_2:54585510-54585529 | Msa0077610:intron | 35.0% | |
| AAAGAGGTGGAAAGGAATAT+GGG | - | chr1_2:54585511-54585530 | Msa0077610:intron | 35.0% | |
| TCAATGACAAAGCGATATAG+AGG | - | chr1_2:54585583-54585602 | Msa0077610:intron | 35.0% | |
| TGATATGCTTTCTATTGCCT+AGG | + | chr1_2:54585824-54585843 | None:intergenic | 35.0% | |
| TTCTTGGGATGATCCATTTC+CGG | - | chr1_2:54579627-54579646 | Msa0077610:three_prime_UTR | 40.0% | |
| !! | GCACGGTCAAAATATTTTGG+GGG | - | chr1_2:54579773-54579792 | Msa0077610:three_prime_UTR | 40.0% |
| ! | TTTTCATGTTGCAGGGATGT+AGG | - | chr1_2:54580057-54580076 | Msa0077610:intron | 40.0% |
| ! | TGCATTTCCCAAGAAGCTTT+TGG | + | chr1_2:54580097-54580116 | None:intergenic | 40.0% |
| AAGAGGGGATTACATAGGAA+AGG | + | chr1_2:54580174-54580193 | None:intergenic | 40.0% | |
| CCAAAAAGAGGGGATTACAT+AGG | + | chr1_2:54580179-54580198 | None:intergenic | 40.0% | |
| ! | CCTATGTAATCCCCTCTTTT+TGG | - | chr1_2:54580176-54580195 | Msa0077610:intron | 40.0% |
| TGAAATCTACACATAGCTGC+AGG | - | chr1_2:54580413-54580432 | Msa0077610:intron | 40.0% | |
| !!! | TTGGGATTTTTTCCCTCTCT+CGG | - | chr1_2:54581324-54581343 | Msa0077610:intron | 40.0% |
| !!! | ATTTTTTCCCTCTCTCGGAT+TGG | - | chr1_2:54581329-54581348 | Msa0077610:intron | 40.0% |
| AAACAATCCAATCCGAGAGA+GGG | + | chr1_2:54581339-54581358 | None:intergenic | 40.0% | |
| AAAACAATCCAATCCGAGAG+AGG | + | chr1_2:54581340-54581359 | None:intergenic | 40.0% | |
| ! | CATTTTCAGCTATGGTGTAC+GGG | - | chr1_2:54581524-54581543 | Msa0077610:intron | 40.0% |
| TTGACAATGGCTTGAAGTTC+CGG | + | chr1_2:54581558-54581577 | None:intergenic | 40.0% | |
| ! | ACATGTTTCTGTTGCATCCA+TGG | - | chr1_2:54581578-54581597 | Msa0077610:intron | 40.0% |
| ! | CTGCTTTGAACGCTATTATC+GGG | - | chr1_2:54581785-54581804 | Msa0077610:intron | 40.0% |
| TTGAACGCTATTATCGGGTA+TGG | - | chr1_2:54581790-54581809 | Msa0077610:intron | 40.0% | |
| TGAACGCTATTATCGGGTAT+GGG | - | chr1_2:54581791-54581810 | Msa0077610:intron | 40.0% | |
| ATAAAATTTGTCACGGGCAC+GGG | + | chr1_2:54581921-54581940 | None:intergenic | 40.0% | |
| CCAGGGATGGCAAAAAAAAA+CGG | + | chr1_2:54581963-54581982 | None:intergenic | 40.0% | |
| GCCGCATATATCAAATGTTG+AGG | - | chr1_2:54582004-54582023 | Msa0077610:intron | 40.0% | |
| ! | AGGAAGATCTGCTCCATTTT+CGG | + | chr1_2:54582339-54582358 | None:intergenic | 40.0% |
| AGCTCTACGGAATTGGAATT+TGG | + | chr1_2:54582496-54582515 | None:intergenic | 40.0% | |
| AACAAAGAGCTCTACGGAAT+TGG | + | chr1_2:54582503-54582522 | None:intergenic | 40.0% | |
| CTCTTCCACAATCAACTCAT+GGG | + | chr1_2:54582696-54582715 | None:intergenic | 40.0% | |
| TCTCTTCCACAATCAACTCA+TGG | + | chr1_2:54582697-54582716 | None:intergenic | 40.0% | |
| TGCAACACCGTAATATTGGT+TGG | - | chr1_2:54583475-54583494 | Msa0077610:intron | 40.0% | |
| TTGGTGTGCTAGATACAGAA+CGG | - | chr1_2:54583888-54583907 | Msa0077610:intron | 40.0% | |
| TAGAGCCTAAGCAGATCTAA+TGG | - | chr1_2:54584004-54584023 | Msa0077610:intron | 40.0% | |
| CAATGGATATCGTCTGAGTT+TGG | - | chr1_2:54584338-54584357 | Msa0077610:intron | 40.0% | |
| TTAATGAAGAGGCAAGCGTA+AGG | + | chr1_2:54584704-54584723 | None:intergenic | 40.0% | |
| CATGAGAAAGGTGATGAATG+AGG | + | chr1_2:54585346-54585365 | None:intergenic | 40.0% | |
| CCCTGCAGAAAATTTGAAGA+TGG | + | chr1_2:54585393-54585412 | None:intergenic | 40.0% | |
| TGGACCTAAACATAAAGAGG+TGG | - | chr1_2:54585498-54585517 | Msa0077610:intron | 40.0% | |
| ATGACAAAGCGATATAGAGG+TGG | - | chr1_2:54585586-54585605 | Msa0077610:intron | 40.0% | |
| GATATAGAGGTGGAAGGAAA+TGG | - | chr1_2:54585596-54585615 | Msa0077610:intron | 40.0% | |
| TTATAGGGTGGAGCCTTTAT+AGG | - | chr1_2:54585723-54585742 | Msa0077610:CDS | 40.0% | |
| ATGCTTTCTATTGCCTAGGT+AGG | + | chr1_2:54585820-54585839 | None:intergenic | 40.0% | |
| GAATTGTAGATCGGACAGAG+AGG | + | chr1_2:54579563-54579582 | None:intergenic | 45.0% | |
| GAGTCTCGACAGCAACTTAA+TGG | + | chr1_2:54579607-54579626 | None:intergenic | 45.0% | |
| TTGCTGTCGAGACTCTTCTT+GGG | - | chr1_2:54579612-54579631 | Msa0077610:three_prime_UTR | 45.0% | |
| TCGACATCTGAGCAAGTCAT+CGG | - | chr1_2:54579723-54579742 | Msa0077610:three_prime_UTR | 45.0% | |
| !! | TGATCGCTGGTTTAAAGCCT+TGG | - | chr1_2:54580351-54580370 | Msa0077610:CDS | 45.0% |
| !! | TGGCTTTGTGTGACTCTTGT+TGG | - | chr1_2:54580530-54580549 | Msa0077610:intron | 45.0% |
| ! | GTTTTATCTGAGCTCTCTGC+TGG | - | chr1_2:54580966-54580985 | Msa0077610:intron | 45.0% |
| CAGATACGTGACACTGATGA+CGG | + | chr1_2:54581015-54581034 | None:intergenic | 45.0% | |
| !! | CAAGAGTGGAAAAGGTACCA+TGG | + | chr1_2:54581598-54581617 | None:intergenic | 45.0% |
| TAAAATTTGTCACGGGCACG+GGG | + | chr1_2:54581920-54581939 | None:intergenic | 45.0% | |
| CAAAAAAAAACGGTGCACGC+TGG | + | chr1_2:54581953-54581972 | None:intergenic | 45.0% | |
| !!! | CCGTTTTTTTTTGCCATCCC+TGG | - | chr1_2:54581960-54581979 | Msa0077610:intron | 45.0% |
| ! | ACTTTTCTTTGGACCAGGGA+TGG | + | chr1_2:54581976-54581995 | None:intergenic | 45.0% |
| ! | CGCAACTTTTCTTTGGACCA+GGG | + | chr1_2:54581980-54581999 | None:intergenic | 45.0% |
| ! | ACGCAACTTTTCTTTGGACC+AGG | + | chr1_2:54581981-54582000 | None:intergenic | 45.0% |
| GGTCGTGTTGAAGAGAATGA+AGG | - | chr1_2:54582278-54582297 | Msa0077610:intron | 45.0% | |
| ATGGAGCAGATCTTCCTGTT+TGG | - | chr1_2:54582342-54582361 | Msa0077610:intron | 45.0% | |
| ! | GTAGGAGTTGATCTCCAAAC+AGG | + | chr1_2:54582359-54582378 | None:intergenic | 45.0% |
| !! | AGAGTCCCATGAGTTGATTG+TGG | - | chr1_2:54582688-54582707 | Msa0077610:intron | 45.0% |
| TGTGCTAGATACAGAACGGA+TGG | - | chr1_2:54583892-54583911 | Msa0077610:intron | 45.0% | |
| CACGTCCATTAGATCTGCTT+AGG | + | chr1_2:54584012-54584031 | None:intergenic | 45.0% | |
| ! | AGCAGATCTAATGGACGTGA+TGG | - | chr1_2:54584013-54584032 | Msa0077610:intron | 45.0% |
| ! | GCAGATCTAATGGACGTGAT+GGG | - | chr1_2:54584014-54584033 | Msa0077610:intron | 45.0% |
| !! | AATGGACGTGATGGGTCAAA+AGG | - | chr1_2:54584022-54584041 | Msa0077610:intron | 45.0% |
| ATCGTCTGAGTTTGGAGAGT+TGG | - | chr1_2:54584346-54584365 | Msa0077610:intron | 45.0% | |
| CATCGAGATAGGAAAGGTTG+TGG | - | chr1_2:54584494-54584513 | Msa0077610:intron | 45.0% | |
| CAAAGCGATATAGAGGTGGA+AGG | - | chr1_2:54585590-54585609 | Msa0077610:intron | 45.0% | |
| AGGTGGAAGGAAATGGACAT+TGG | - | chr1_2:54585603-54585622 | Msa0077610:intron | 45.0% | |
| GGAGCATAACACTGCAACAA+AGG | - | chr1_2:54585624-54585643 | Msa0077610:intron | 45.0% | |
| !! | AAAGAATTAAAATAAAAAAT+AGG | + | chr1_2:54582983-54583002 | None:intergenic | 5.0% |
| !!! | TATTTTTTATTTTAATTCTT+TGG | - | chr1_2:54582982-54583001 | Msa0077610:intron | 5.0% |
| !!! | TATAAATTATATTTCTAATT+AGG | - | chr1_2:54584128-54584147 | Msa0077610:intron | 5.0% |
| TTGTAGATCGGACAGAGAGG+AGG | + | chr1_2:54579560-54579579 | None:intergenic | 50.0% | |
| GTTGCTGTCGAGACTCTTCT+TGG | - | chr1_2:54579611-54579630 | Msa0077610:three_prime_UTR | 50.0% | |
| ATCGGAGATCCAGTACTCGA+CGG | + | chr1_2:54579667-54579686 | None:intergenic | 50.0% | |
| !! | GCGCTAGAAGTCGTTTTGCA+CGG | - | chr1_2:54579756-54579775 | Msa0077610:three_prime_UTR | 50.0% |
| TCATGTTGCAGGGATGTAGG+TGG | - | chr1_2:54580060-54580079 | Msa0077610:intron | 50.0% | |
| ! | CATAGTGATGAGGCGTCTCA+TGG | - | chr1_2:54580389-54580408 | Msa0077610:intron | 50.0% |
| ! | TGGTGTACGGGTTACATCTC+CGG | - | chr1_2:54581536-54581555 | Msa0077610:intron | 50.0% |
| ! | GGCTGCACGCAACTTTTCTT+TGG | + | chr1_2:54581987-54582006 | None:intergenic | 50.0% |
| CTCAGGAATTAGGATGGCGT+TGG | - | chr1_2:54584997-54585016 | Msa0077610:intron | 50.0% | |
| !! | AGGATGGCGTTGGAGTGTTT+TGG | - | chr1_2:54585007-54585026 | Msa0077610:intron | 50.0% |
| !! | GATGATGGTACTGACCAGCA+GGG | + | chr1_2:54585042-54585061 | None:intergenic | 50.0% |
| TCGGACAGAGAGGAGGAAGA+TGG | + | chr1_2:54579553-54579572 | None:intergenic | 55.0% | |
| TCCAGTACTCGACGGATGCT+CGG | + | chr1_2:54579659-54579678 | None:intergenic | 55.0% | |
| !! | GCTGCAGGCTGTTTTCGTGA+TGG | - | chr1_2:54580428-54580447 | Msa0077610:intron | 55.0% |
| TTATCGGGTATGGGTACCCG+CGG | - | chr1_2:54581800-54581819 | Msa0077610:intron | 55.0% | |
| TTTGCTGATACCCGTTCCCG+CGG | + | chr1_2:54581820-54581839 | None:intergenic | 55.0% | |
| TTTGGCAGTGATCTCCCTGC+TGG | - | chr1_2:54585025-54585044 | Msa0077610:intron | 55.0% | |
| !! | GGATGATGGTACTGACCAGC+AGG | + | chr1_2:54585043-54585062 | None:intergenic | 55.0% |
| AGTACTCGACGGATGCTCGG+AGG | + | chr1_2:54579656-54579675 | None:intergenic | 60.0% | |
| TCCGAGCATCCGTCGAGTAC+TGG | - | chr1_2:54579655-54579674 | Msa0077610:three_prime_UTR | 60.0% | |
| TATCGGGTATGGGTACCCGC+GGG | - | chr1_2:54581801-54581820 | Msa0077610:intron | 60.0% | |
| TTGCTGATACCCGTTCCCGC+GGG | + | chr1_2:54581819-54581838 | None:intergenic | 60.0% | |
| ! | GCACGGGGCTGGTAGCTAAA+CGG | + | chr1_2:54581905-54581924 | None:intergenic | 60.0% |
| TGCTCGGAGGTCGCCGGAAA+TGG | + | chr1_2:54579643-54579662 | None:intergenic | 65.0% | |
| GGTATGGGTACCCGCGGGAA+CGG | - | chr1_2:54581806-54581825 | Msa0077610:intron | 65.0% | |
| GTATGGGTACCCGCGGGAAC+GGG | - | chr1_2:54581807-54581826 | Msa0077610:intron | 65.0% | |
| ATTTGTCACGGGCACGGGGC+TGG | + | chr1_2:54581916-54581935 | None:intergenic | 65.0% | |
| GACGGATGCTCGGAGGTCGC+CGG | + | chr1_2:54579649-54579668 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 54579541 | 54585855 | 54579541 | ID=Msa0077610;Name=Msa0077610 |
| chr1_2 | mRNA | 54579541 | 54585855 | 54579541 | ID=Msa0077610-mRNA-1;Parent=Msa0077610;Name=Msa0077610-mRNA-1;_AED=0.40;_eAED=0.51;_QI=0|0.4|0.66|1|0.8|0.66|6|413|154 |
| chr1_2 | exon | 54579541 | 54579985 | 54579541 | ID=Msa0077610-mRNA-1:exon:16943;Parent=Msa0077610-mRNA-1 |
| chr1_2 | exon | 54580350 | 54580394 | 54580350 | ID=Msa0077610-mRNA-1:exon:16942;Parent=Msa0077610-mRNA-1 |
| chr1_2 | exon | 54583009 | 54583120 | 54583009 | ID=Msa0077610-mRNA-1:exon:16941;Parent=Msa0077610-mRNA-1 |
| chr1_2 | exon | 54583797 | 54583863 | 54583797 | ID=Msa0077610-mRNA-1:exon:16940;Parent=Msa0077610-mRNA-1 |
| chr1_2 | exon | 54585279 | 54585325 | 54585279 | ID=Msa0077610-mRNA-1:exon:16939;Parent=Msa0077610-mRNA-1 |
| chr1_2 | exon | 54585694 | 54585855 | 54585694 | ID=Msa0077610-mRNA-1:exon:16938;Parent=Msa0077610-mRNA-1 |
| chr1_2 | CDS | 54585694 | 54585855 | 54585694 | ID=Msa0077610-mRNA-1:cds;Parent=Msa0077610-mRNA-1 |
| chr1_2 | CDS | 54585279 | 54585325 | 54585279 | ID=Msa0077610-mRNA-1:cds;Parent=Msa0077610-mRNA-1 |
| chr1_2 | CDS | 54583797 | 54583863 | 54583797 | ID=Msa0077610-mRNA-1:cds;Parent=Msa0077610-mRNA-1 |
| chr1_2 | CDS | 54583009 | 54583120 | 54583009 | ID=Msa0077610-mRNA-1:cds;Parent=Msa0077610-mRNA-1 |
| chr1_2 | CDS | 54580350 | 54580394 | 54580350 | ID=Msa0077610-mRNA-1:cds;Parent=Msa0077610-mRNA-1 |
| chr1_2 | CDS | 54579954 | 54579985 | 54579954 | ID=Msa0077610-mRNA-1:cds;Parent=Msa0077610-mRNA-1 |
| chr1_2 | three_prime_UTR | 54579541 | 54579953 | 54579541 | ID=Msa0077610-mRNA-1:three_prime_utr;Parent=Msa0077610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
