AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0393080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0393080 MtrunA17_Chr3g0078341 98.780 82 1 0 1 82 449 530 7.35e-53 171
Msa0393080 MtrunA17_Chr6g0475211 95.122 82 4 0 1 82 453 534 2.58e-49 162
Msa0393080 MtrunA17_Chr6g0476081 77.333 75 16 1 2 76 13 86 4.90e-37 119
Msa0393080 MtrunA17_Chr7g0223571 58.621 87 31 1 1 82 1 87 2.42e-27 95.5
Msa0393080 MtrunA17_Chr1g0149091 59.211 76 28 1 1 73 22 97 4.21e-27 94.7
Msa0393080 MtrunA17_Chr1g0149891 61.333 75 26 1 2 73 257 331 1.59e-26 99.0
Msa0393080 MtrunA17_Chr1g0149901 60.526 76 27 1 1 73 129 204 1.62e-26 96.3
Msa0393080 MtrunA17_Chr6g0450541 52.439 82 36 1 1 79 8 89 3.79e-24 87.0
Msa0393080 MtrunA17_Chr6g0482631 48.718 117 15 3 1 74 1 115 2.27e-23 85.9
Msa0393080 MtrunA17_Chr6g0450581 51.852 81 36 1 2 79 227 307 2.85e-21 84.7
Msa0393080 MtrunA17_Chr1g0159581 51.852 81 36 1 2 79 125 205 3.00e-21 82.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0393080 AT5G51740.1 74.699 83 19 2 1 82 361 442 1.04e-34 122
Msa0393080 AT5G51740.2 74.699 83 19 2 1 82 404 485 1.76e-34 122

Find 162 sgRNAs with CRISPR-Local

Find 621 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAATCTGGGTATTTGAATT+TGG 0.114800 3_2:+6984993 Msa0393080:five_prime_UTR
GTGAAAATAATAAGAATATT+AGG 0.145873 3_2:+6985088 Msa0393080:five_prime_UTR
ATGAGATTCTTGATGATAAA+TGG 0.146030 3_2:+6985775 Msa0393080:five_prime_UTR
TGGATTGAATTGGGAGATTT+TGG 0.167567 3_2:+6985860 Msa0393080:five_prime_UTR
TCTCAAGGTTGTAACTTTAA+TGG 0.172006 3_2:+6985117 Msa0393080:five_prime_UTR
GGCAACAGATCCAGTTAATT+TGG 0.179739 3_2:-6991621 None:intergenic
TTTCTAAGATATTAGATAAA+AGG 0.183661 3_2:+6985160 Msa0393080:five_prime_UTR
CACATTAAAGCTAGCATCTT+TGG 0.187610 3_2:-6985019 None:intergenic
GCTGAAGCTGACAGATAATT+TGG 0.192402 3_2:+6991760 Msa0393080:three_prime_UTR
AACAAAAGTGCTAACTTTAA+TGG 0.199037 3_2:+6984925 Msa0393080:five_prime_UTR
AAATTGATTCATCTTGTTAT+TGG 0.204174 3_2:-6984479 None:intergenic
ATCCTCACTCTTACACTTTC+AGG 0.212835 3_2:-6985579 None:intergenic
GTAAAGGTGTTAGCTTTAAA+AGG 0.234129 3_2:+6985217 Msa0393080:five_prime_UTR
CAATCTGGGTATTTGAATTT+GGG 0.238019 3_2:+6984994 Msa0393080:five_prime_UTR
AATTGATTCATCTTGTTATT+GGG 0.268742 3_2:-6984478 None:intergenic
GGATTCTGAAACCAATTCTT+TGG 0.281604 3_2:-6985360 None:intergenic
GCAGAGATAGCAACTATTAT+TGG 0.282923 3_2:+6985972 Msa0393080:five_prime_UTR
CTCAAGGTTGTAACTTTAAT+GGG 0.283856 3_2:+6985118 Msa0393080:five_prime_UTR
TTTGAGATTAATAAGAATAT+TGG 0.285361 3_2:+6985186 Msa0393080:five_prime_UTR
GGTTCAGAAGAGTAGGAAAA+AGG 0.286020 3_2:+6985797 Msa0393080:five_prime_UTR
CCATCCAAATGTGACGTATT+AGG 0.286467 3_2:-6985840 None:intergenic
CTGCATGTTTCCAAATTAAC+TGG 0.288993 3_2:+6991611 Msa0393080:three_prime_UTR
ATCTTCTTCTCCATCTCTTT+CGG 0.290022 3_2:-6985492 None:intergenic
TGTATTGGCAGGAGTAAAAT+TGG 0.293932 3_2:+6984342 Msa0393080:intron
GCAATCTGGGTATTTGAATC+TGG 0.296972 3_2:+6984900 Msa0393080:five_prime_UTR
AGATGAATAGTGGGAGAAAA+TGG 0.297872 3_2:-6984672 None:intergenic
CACATTTGGATGGATTGAAT+TGG 0.299543 3_2:+6985850 Msa0393080:five_prime_UTR
AAATGTGTTCTCTTCGTATA+AGG 0.304300 3_2:-6985459 None:intergenic
ACAAAAGTGCTAACTTTAAT+GGG 0.313258 3_2:+6984926 Msa0393080:five_prime_UTR
CCCAACTTCTCGTAGACTTT+AGG 0.315746 3_2:-6991335 None:intergenic
TGGGAAGATAGTTGTGTTTA+CGG 0.319349 3_2:+6985923 Msa0393080:five_prime_UTR
AACCAATTCTTTGGCCCTCT+TGG 0.319495 3_2:-6985351 None:intergenic
TGGTGTTGAAGGATTTCTTT+AGG 0.322830 3_2:+6991493 Msa0393080:CDS
AAATCTCGTCGCGTAGTTGC+CGG 0.334786 3_2:-6983059 None:intergenic
ACACTTTCAGGGTGCATTGC+AGG 0.341748 3_2:-6985567 None:intergenic
TTGAGATTAATAAGAATATT+GGG 0.342471 3_2:+6985187 Msa0393080:five_prime_UTR
TGAAAATAATAAGAATATTA+GGG 0.346615 3_2:+6985089 Msa0393080:five_prime_UTR
GATTGCAACGTTCTGTTACT+AGG 0.353680 3_2:-6984883 None:intergenic
ATTTCAAGAGATTAGACAAC+AGG 0.356427 3_2:+6985259 Msa0393080:five_prime_UTR
ATGATGAGATTGAAGGAAAT+AGG 0.358466 3_2:-6984428 None:intergenic
ATTGGTATAGTGGTTGGTTC+TGG 0.359308 3_2:+6985396 Msa0393080:five_prime_UTR
GATTGCAAAATTCTGTTACT+AGG 0.362105 3_2:-6984976 None:intergenic
TACTGTGTTTGGTGAAGAAA+AGG 0.364696 3_2:+6985686 Msa0393080:five_prime_UTR
TCTTCCATTTCTAAGAGATT+AGG 0.367132 3_2:+6985054 Msa0393080:five_prime_UTR
AGCCAAGAGGGCCAAAGAAT+TGG 0.368828 3_2:+6985349 Msa0393080:five_prime_UTR
AGTAACAGAACGTTGCAATC+TGG 0.371103 3_2:+6984886 Msa0393080:five_prime_UTR
AAGAAAACGAGCAGAATTAC+TGG 0.372401 3_2:+6991412 Msa0393080:CDS
TTGAGAAAACAAGACGCATT+TGG 0.375417 3_2:+6983080 Msa0393080:five_prime_UTR
AAGAGATGGAGAAGAAGATT+GGG 0.386070 3_2:+6985496 Msa0393080:five_prime_UTR
CATCCCCTCAGCACTGTGTC+TGG 0.390785 3_2:-6986364 None:intergenic
GAGGGAAAGTTGAAGGGAAT+TGG 0.391132 3_2:+6985742 Msa0393080:five_prime_UTR
TTTGATCTTCCTATCCTTGT+CGG 0.394467 3_2:-6984374 None:intergenic
GTTGCCTGAGATTCAGAGTA+TGG 0.397325 3_2:+6991638 Msa0393080:three_prime_UTR
TTCTAAGATATTAGATAAAA+GGG 0.399166 3_2:+6985161 Msa0393080:five_prime_UTR
CTATGTCATCACTTCTCTTA+CGG 0.399194 3_2:+6986457 Msa0393080:five_prime_UTR
GCTTCAGAAAATACTGTGTT+TGG 0.401820 3_2:+6985675 Msa0393080:five_prime_UTR
GGGAAGATAGTTGTGTTTAC+GGG 0.403532 3_2:+6985924 Msa0393080:five_prime_UTR
GACATAGTGTTGACAATATC+AGG 0.403878 3_2:-6986441 None:intergenic
GGAAATTTGTGGGTATGCTT+TGG 0.404922 3_2:-6984712 None:intergenic
TTTGAAGAGAGGGTTGAGTA+AGG 0.405119 3_2:+6985626 Msa0393080:five_prime_UTR
AGAGGAAAGCTTGTTCTTGA+TGG 0.407337 3_2:+6984811 Msa0393080:five_prime_UTR
CGTCGCGTAGTTGCCGGATC+TGG 0.407365 3_2:-6983053 None:intergenic
TTTCCGGGTTCTTTCAATCA+TGG 0.410122 3_2:+6984777 Msa0393080:five_prime_UTR
ACATTTGGATGGATTGAATT+GGG 0.413686 3_2:+6985851 Msa0393080:five_prime_UTR
ATTAATAAGAATATTGGGTT+GGG 0.417432 3_2:+6985192 Msa0393080:five_prime_UTR
AATGATTTGGTCTGGTGATA+AGG 0.419634 3_2:-6983107 None:intergenic
GAGTTTGAGAAGATGAAGGC+AGG 0.420112 3_2:+6985525 Msa0393080:five_prime_UTR
CATGAAAGGAAGATGAATAG+TGG 0.421194 3_2:-6984682 None:intergenic
AAAGAGATGGAGAAGAAGAT+TGG 0.422292 3_2:+6985495 Msa0393080:five_prime_UTR
AGAGAAGGACATGGTGTTGA+AGG 0.427494 3_2:+6991482 Msa0393080:CDS
AGAATTGGTTTCAGAATCCT+AGG 0.434255 3_2:+6985364 Msa0393080:five_prime_UTR
GCAACCTAATACGTCACATT+TGG 0.438474 3_2:+6985836 Msa0393080:five_prime_UTR
TGAGATTCTTGATGATAAAT+GGG 0.439908 3_2:+6985776 Msa0393080:five_prime_UTR
GTAACAGAACGTTGCAATCT+GGG 0.441464 3_2:+6984887 Msa0393080:five_prime_UTR
GCATGTTATGATTGGTATAG+TGG 0.453566 3_2:+6985386 Msa0393080:five_prime_UTR
CAATCTGGGTATTTGAATCT+GGG 0.456335 3_2:+6984901 Msa0393080:five_prime_UTR
CATTCCTCCTACATTGTGTT+GGG 0.460494 3_2:+6991585 Msa0393080:three_prime_UTR
AATATTGGGTTGGGTTGTAA+AGG 0.464328 3_2:+6985201 Msa0393080:five_prime_UTR
ACCTAAAGTCTACGAGAAGT+TGG 0.465177 3_2:+6991334 Msa0393080:CDS
TTGTTGAAGCTTTGAAGAGA+GGG 0.466119 3_2:+6985616 Msa0393080:five_prime_UTR
ATTACTATGCACTGAGTCAC+TGG 0.466474 3_2:+6991806 Msa0393080:three_prime_UTR
AATCCTAGGCATGTTATGAT+TGG 0.472024 3_2:+6985378 Msa0393080:five_prime_UTR
ACTGTGTTTGGTGAAGAAAA+GGG 0.472337 3_2:+6985687 Msa0393080:five_prime_UTR
ATCTAAAAGCTTAGAATCGC+CGG 0.472748 3_2:-6991366 None:intergenic
TTTGATGAGTGGAAATTTGT+GGG 0.491964 3_2:-6984722 None:intergenic
TGCAGAAGAAGCAATGGATT+AGG 0.492005 3_2:+6991703 Msa0393080:three_prime_UTR
TCCTCACTCTTACACTTTCA+GGG 0.494164 3_2:-6985578 None:intergenic
GATTAATAAGAATATTGGGT+TGG 0.498993 3_2:+6985191 Msa0393080:five_prime_UTR
GAAAGTGGAGGGAAAGTTGA+AGG 0.499097 3_2:+6985735 Msa0393080:five_prime_UTR
GCTACCATACTCTGAATCTC+AGG 0.503263 3_2:-6991642 None:intergenic
TAATCAAAGCCGACAAGGAT+AGG 0.503785 3_2:+6984365 Msa0393080:five_prime_UTR
AATATTAGGGTTGGTTCTCA+AGG 0.503963 3_2:+6985102 Msa0393080:five_prime_UTR
CCTAATACGTCACATTTGGA+TGG 0.504235 3_2:+6985840 Msa0393080:five_prime_UTR
GGATGTAGAAAGAGTGTTCA+CGG 0.507138 3_2:-6984647 None:intergenic
AATGATTACCTTCTGGAGAA+AGG 0.507195 3_2:-6986483 None:intergenic
ATTAGTGCATTGACTGAAAG+TGG 0.507872 3_2:+6985720 Msa0393080:five_prime_UTR
GTTATGATTGGTATAGTGGT+TGG 0.507924 3_2:+6985390 Msa0393080:five_prime_UTR
CTTCTATTAGTTGCATCCGC+TGG 0.508982 3_2:+6991293 Msa0393080:CDS
CCTAAAGTCTACGAGAAGTT+GGG 0.509175 3_2:+6991335 Msa0393080:CDS
AATAATAAGAATATTAGGGT+TGG 0.510133 3_2:+6985093 Msa0393080:five_prime_UTR
TCACGGGTGACGCACACACG+TGG 0.513046 3_2:-6984630 None:intergenic
GGGTTCTTTCAATCATGGCT+TGG 0.514869 3_2:+6984782 Msa0393080:five_prime_UTR
ACATTCCTCCTACATTGTGT+TGG 0.515234 3_2:+6991584 Msa0393080:three_prime_UTR
AGGGGATGACAAAGAATATG+TGG 0.517207 3_2:+6986379 Msa0393080:five_prime_UTR
ATGAAAGGAAGATGAATAGT+GGG 0.517888 3_2:-6984681 None:intergenic
TTTGGTGGTGAATGATCCTA+TGG 0.519554 3_2:+6985878 Msa0393080:five_prime_UTR
AAAATTCTTACTTGTGAAAG+GGG 0.521206 3_2:-6984577 None:intergenic
TTGCCGGATCTGGCATCAAA+AGG 0.521445 3_2:-6983043 None:intergenic
TACGGCTTCCTTTCTCCAGA+AGG 0.521905 3_2:+6986475 Msa0393080:five_prime_UTR
GAGAGAGTTTGAGAAGATGA+AGG 0.524062 3_2:+6985521 Msa0393080:five_prime_UTR
ATAAATGGGTTCAGAAGAGT+AGG 0.531439 3_2:+6985790 Msa0393080:five_prime_UTR
CTTCCCACCAGGTAAGCAAA+AGG 0.542507 3_2:-6985907 None:intergenic
CTGCAAGTGAATACATTGCA+TGG 0.544679 3_2:+6991733 Msa0393080:three_prime_UTR
ATTGTTGAAGCTTTGAAGAG+AGG 0.546244 3_2:+6985615 Msa0393080:five_prime_UTR
AAGTTGAAGGGAATTGGCAT+CGG 0.548246 3_2:+6985748 Msa0393080:five_prime_UTR
ACTGGCTCAAGCTGAGGTGA+TGG 0.548873 3_2:+6991430 Msa0393080:CDS
ATCAAGTGCAGAAGAAGCAA+TGG 0.548877 3_2:+6991697 Msa0393080:three_prime_UTR
AGTTGAAGGGAATTGGCATC+GGG 0.552278 3_2:+6985749 Msa0393080:five_prime_UTR
AAGCAAAAGGCATTAACCAT+AGG 0.561244 3_2:-6985894 None:intergenic
AGAGATGGAGAAGAAGATTG+GGG 0.562312 3_2:+6985497 Msa0393080:five_prime_UTR
GCTTTGGATTGAAGCATGAA+AGG 0.564967 3_2:-6984696 None:intergenic
ATACCAATCATAACATGCCT+AGG 0.568681 3_2:-6985381 None:intergenic
GAAATTGAAGCTGATTACAT+TGG 0.569179 3_2:+6991269 Msa0393080:CDS
GTGGCCAGACACAGTGCTGA+GGG 0.570445 3_2:+6986360 Msa0393080:five_prime_UTR
GGTTGAGTAAGGAGAATGTG+TGG 0.571308 3_2:+6985637 Msa0393080:five_prime_UTR
GGGTGTGTGATTCGTGAAGA+AGG 0.573392 3_2:-6984609 None:intergenic
CTGTGTTTGGTGAAGAAAAG+GGG 0.574536 3_2:+6985688 Msa0393080:five_prime_UTR
GATCTGGCATCAAAAGGTGA+TGG 0.577996 3_2:-6983037 None:intergenic
TCTTACTTGTGAAAGGGGAA+AGG 0.585595 3_2:-6984572 None:intergenic
GCAGTCTCCCAACACAATGT+AGG 0.592645 3_2:-6991592 None:intergenic
GTCTCCCAACACAATGTAGG+AGG 0.595993 3_2:-6991589 None:intergenic
AGCAACTATTATTGGACATG+AGG 0.602186 3_2:+6985980 Msa0393080:five_prime_UTR
GAATAGTGGGAGAAAATGGA+AGG 0.604703 3_2:-6984668 None:intergenic
AAAGTGGAGGGAAAGTTGAA+GGG 0.608573 3_2:+6985736 Msa0393080:five_prime_UTR
ATCATGGCTTGGTATAGAAG+AGG 0.608651 3_2:+6984793 Msa0393080:five_prime_UTR
AAGCCATGATTGAAAGAACC+CGG 0.611194 3_2:-6984780 None:intergenic
GATGTAGAAAGAGTGTTCAC+GGG 0.614651 3_2:-6984646 None:intergenic
AACACAACTATCTTCCCACC+AGG 0.619918 3_2:-6985918 None:intergenic
AGAGTAACAGATTTCAAGAG+TGG 0.621766 3_2:-6991664 None:intergenic
GTGCATTGACTGAAAGTGGA+GGG 0.623353 3_2:+6985724 Msa0393080:five_prime_UTR
AGAATTACTGGCTCAAGCTG+AGG 0.632399 3_2:+6991424 Msa0393080:CDS
TTTAACTGATATCATAACAG+AGG 0.634659 3_2:+6982948 Msa0393080:five_prime_UTR
CGCTGGCTATGATCCACGTG+TGG 0.635218 3_2:+6991310 Msa0393080:CDS
ATATATAAGAATGTAAGAGA+AGG 0.642352 3_2:+6991467 Msa0393080:CDS
AGAAGAAGCAATGGATTAGG+TGG 0.644261 3_2:+6991706 Msa0393080:three_prime_UTR
TTTCAAGAGATTAGACAACA+GGG 0.648905 3_2:+6985260 Msa0393080:five_prime_UTR
GGGGATGACAAAGAATATGT+GGG 0.650366 3_2:+6986380 Msa0393080:five_prime_UTR
GTTTGGTGAAGAAAAGGGGA+AGG 0.654958 3_2:+6985692 Msa0393080:five_prime_UTR
TGTGGCCAGACACAGTGCTG+AGG 0.662397 3_2:+6986359 Msa0393080:five_prime_UTR
TAATTAGGTTGGACATGCTG+TGG 0.665392 3_2:+6986341 Msa0393080:intron
TTCAAGAGATTAGACAACAG+GGG 0.668530 3_2:+6985261 Msa0393080:five_prime_UTR
ATGTGGATCCTCAAAATGTG+CGG 0.671867 3_2:+6985319 Msa0393080:five_prime_UTR
ATTGGTAATCAAAGCCGACA+AGG 0.673145 3_2:+6984360 Msa0393080:five_prime_UTR
AGTGCATTGACTGAAAGTGG+AGG 0.673147 3_2:+6985723 Msa0393080:five_prime_UTR
TAGACTTTAGGTGCCACACG+TGG 0.678929 3_2:-6991323 None:intergenic
CACGGGTGACGCACACACGT+GGG 0.686760 3_2:-6984629 None:intergenic
AAGAATGTAAGAGAAGGACA+TGG 0.701425 3_2:+6991473 Msa0393080:CDS
CACACGTGGATCATAGCCAG+CGG 0.708062 3_2:-6991309 None:intergenic
TGGCCAGACACAGTGCTGAG+GGG 0.712731 3_2:+6986361 Msa0393080:five_prime_UTR
TGGTGATGTGAGAGATTGAG+CGG 0.713310 3_2:-6983010 None:intergenic
CATCAAAAGGTGATGGACAG+TGG 0.714241 3_2:-6983030 None:intergenic
ACCCTGAAAGTGTAAGAGTG+AGG 0.750161 3_2:+6985577 Msa0393080:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATTAATATTTAATA+GGG - chr3_2:6987267-6987286 None:intergenic 0.0%
!! AAAAAAAATTAATATTTAAT+AGG - chr3_2:6987268-6987287 None:intergenic 0.0%
!! AAAAATTATATTATAAATAA+AGG - chr3_2:6987796-6987815 None:intergenic 0.0%
!!! TTTTATTTTTTATTTTTTTA+TGG - chr3_2:6989385-6989404 None:intergenic 0.0%
!! AAAATAATAGTAGTAATATA+TGG - chr3_2:6983501-6983520 None:intergenic 10.0%
!! TGAAAATAATAAGAATATTA+GGG + chr3_2:6985089-6985108 Msa0393080:five_prime_UTR 10.0%
!!! TTTATTTTATTTGAAAAAAG+AGG + chr3_2:6987063-6987082 Msa0393080:intron 10.0%
!!! TAGTAATAATACTTTTTAAA+AGG + chr3_2:6987368-6987387 Msa0393080:intron 10.0%
!!! TATTGTATTATTTTTTTTGA+AGG - chr3_2:6987418-6987437 None:intergenic 10.0%
!!! AGTATATTGTTTTTAAATTA+TGG + chr3_2:6987453-6987472 Msa0393080:intron 10.0%
!!! AATTTTGATTTATCATATAT+TGG + chr3_2:6989437-6989456 Msa0393080:intron 10.0%
!!! AAAATGTACAAATTTAAAAT+TGG - chr3_2:6989923-6989942 None:intergenic 10.0%
!!! AAAATATTTTGAAAAAGTTA+AGG + chr3_2:6991536-6991555 Msa0393080:three_prime_UTR 10.0%
!! ACAAATTTAAAAGATAATGA+AGG - chr3_2:6983255-6983274 None:intergenic 15.0%
!! AGAAAAATAGTAGTAATATA+TGG - chr3_2:6983582-6983601 None:intergenic 15.0%
!!! ATTTTTTATATTCCATTTCA+TGG + chr3_2:6984269-6984288 Msa0393080:intron 15.0%
!!! ATGAAAAAATTGAAATTTTG+TGG - chr3_2:6984749-6984768 None:intergenic 15.0%
!! GTGAAAATAATAAGAATATT+AGG + chr3_2:6985088-6985107 Msa0393080:five_prime_UTR 15.0%
!!! TTTCTAAGATATTAGATAAA+AGG + chr3_2:6985160-6985179 Msa0393080:five_prime_UTR 15.0%
!!! TTCTAAGATATTAGATAAAA+GGG + chr3_2:6985161-6985180 Msa0393080:five_prime_UTR 15.0%
!!! TTTGAGATTAATAAGAATAT+TGG + chr3_2:6985186-6985205 Msa0393080:five_prime_UTR 15.0%
!! TTGAGATTAATAAGAATATT+GGG + chr3_2:6985187-6985206 Msa0393080:five_prime_UTR 15.0%
!!! TTTTTATAACTGTGTATTTT+GGG + chr3_2:6985421-6985440 Msa0393080:five_prime_UTR 15.0%
!!! ATAAATTTTACTTGAATTAG+TGG + chr3_2:6986667-6986686 Msa0393080:intron 15.0%
!! TTTATTAAGTACATTGTTTA+AGG + chr3_2:6987560-6987579 Msa0393080:intron 15.0%
!!! AGTATATTTTTTTAGCATTA+TGG + chr3_2:6987589-6987608 Msa0393080:intron 15.0%
!!! ATGTTTAAGTATGTTATTTA+AGG + chr3_2:6987624-6987643 Msa0393080:intron 15.0%
!!! ATAACAATGATAAGTTTTTA+AGG - chr3_2:6989522-6989541 None:intergenic 15.0%
!!! TGGTTTTAAATAAAAAACAA+GGG - chr3_2:6990741-6990760 None:intergenic 15.0%
!!! TTGGTTTTAAATAAAAAACA+AGG - chr3_2:6990742-6990761 None:intergenic 15.0%
!!! TTGTTTTTTATTTAAAACCA+AGG + chr3_2:6990741-6990760 Msa0393080:intron 15.0%
!!! ATATTTTCACAAAACAATTA+TGG - chr3_2:6991523-6991542 None:intergenic 15.0%
!! TTGAAAGTAGAATTCATATA+AGG - chr3_2:6983307-6983326 None:intergenic 20.0%
!! TTATATGAATTCTACTTTCA+AGG + chr3_2:6983306-6983325 Msa0393080:intron 20.0%
!!! TGAATTTTGAGTAATGTTTA+AGG - chr3_2:6983462-6983481 None:intergenic 20.0%
!!! AAGAGTAAAGTGTTTATAAA+AGG + chr3_2:6983629-6983648 Msa0393080:intron 20.0%
!! AAAAGGAAAACATTTAGTAT+TGG + chr3_2:6983646-6983665 Msa0393080:intron 20.0%
!! AAAGGAAAACATTTAGTATT+GGG + chr3_2:6983647-6983666 Msa0393080:intron 20.0%
!! AAAGTTGTAGAAATTTATCT+GGG - chr3_2:6983688-6983707 None:intergenic 20.0%
!! TAAAGTTGTAGAAATTTATC+TGG - chr3_2:6983689-6983708 None:intergenic 20.0%
!! AGAAATAAAAGATGAAATCA+AGG - chr3_2:6983980-6983999 None:intergenic 20.0%
!!! TTGATTTCATCTTTTATTTC+TGG + chr3_2:6983979-6983998 Msa0393080:intron 20.0%
!! AAAATGTAATACAAAACATG+AGG - chr3_2:6984313-6984332 None:intergenic 20.0%
!!! CATTTTTGATAATTCTGTAT+TGG + chr3_2:6984327-6984346 Msa0393080:intron 20.0%
!!! AATTGATTCATCTTGTTATT+GGG - chr3_2:6984481-6984500 None:intergenic 20.0%
!!! AAATTGATTCATCTTGTTAT+TGG - chr3_2:6984482-6984501 None:intergenic 20.0%
!!! ATTTTTCTAATTGAGTTTCA+CGG + chr3_2:6984498-6984517 Msa0393080:five_prime_UTR 20.0%
!! AAAAATTCTTACTTGTGAAA+GGG - chr3_2:6984581-6984600 None:intergenic 20.0%
!! AAAAAATTCTTACTTGTGAA+AGG - chr3_2:6984582-6984601 None:intergenic 20.0%
!!! TTTTTCATCAATTTAGTTTC+CGG + chr3_2:6984761-6984780 Msa0393080:five_prime_UTR 20.0%
!! AATAATAAGAATATTAGGGT+TGG + chr3_2:6985093-6985112 Msa0393080:five_prime_UTR 20.0%
!! ATTAATAAGAATATTGGGTT+GGG + chr3_2:6985192-6985211 Msa0393080:five_prime_UTR 20.0%
!!! TTGAAGTTAATACGAATTTT+AGG + chr3_2:6985286-6985305 Msa0393080:five_prime_UTR 20.0%
!!! GTTTTTATAACTGTGTATTT+TGG + chr3_2:6985420-6985439 Msa0393080:five_prime_UTR 20.0%
!!! TTTGATTCGTTTAACTTATT+AGG + chr3_2:6986009-6986028 Msa0393080:intron 20.0%
!! GAACAATACAAAAATTCAAT+TGG - chr3_2:6986529-6986548 None:intergenic 20.0%
!! AAGTGAAAAACATGAAATTA+GGG + chr3_2:6986635-6986654 Msa0393080:intron 20.0%
!! AAATAAAAGAGACAAACAAA+AGG - chr3_2:6987050-6987069 None:intergenic 20.0%
!! AAATAAAAGAGACAAACAAA+TGG - chr3_2:6987050-6987069 None:intergenic 20.0%
!! AATTAATATTTAATAGGGAG+TGG - chr3_2:6987262-6987281 None:intergenic 20.0%
!!! ATTTTGGCCTTTTATTATTT+TGG + chr3_2:6988272-6988291 Msa0393080:intron 20.0%
!!! TAAGATGCTATTGATTAAAA+TGG + chr3_2:6988530-6988549 Msa0393080:intron 20.0%
!! TTATTGTATAAATGAAGAGT+TGG - chr3_2:6989360-6989379 None:intergenic 20.0%
!! AAATTCCAATTCATATTTAG+AGG - chr3_2:6989422-6989441 None:intergenic 20.0%
!! CAAAAAGTTATATGAAATAG+CGG - chr3_2:6990118-6990137 None:intergenic 20.0%
!! AGAAACTGAAGTTATTAATT+AGG + chr3_2:6990692-6990711 Msa0393080:intron 20.0%
!! GAAACTGAAGTTATTAATTA+GGG + chr3_2:6990693-6990712 Msa0393080:intron 20.0%
!! AATGGAATATGAAAATTTGA+TGG - chr3_2:6991032-6991051 None:intergenic 20.0%
!!! CATTAGTTTTGTTTATACTT+GGG - chr3_2:6991139-6991158 None:intergenic 20.0%
!!! ACATTAGTTTTGTTTATACT+TGG - chr3_2:6991140-6991159 None:intergenic 20.0%
!!! ATTTTAACTATACACAAATG+TGG + chr3_2:6991161-6991180 Msa0393080:intron 20.0%
!! GAAAAAATGTGGAAAAAATT+GGG - chr3_2:6991243-6991262 None:intergenic 20.0%
!! TGAAAAAATGTGGAAAAAAT+TGG - chr3_2:6991244-6991263 None:intergenic 20.0%
!!! AATTTTTTCCACATTTTTTC+AGG + chr3_2:6991243-6991262 Msa0393080:intron 20.0%
!! ATATATAAGAATGTAAGAGA+AGG + chr3_2:6991467-6991486 Msa0393080:CDS 20.0%
! TTTAACTGATATCATAACAG+AGG + chr3_2:6982948-6982967 Msa0393080:five_prime_UTR 25.0%
!!! TTATTTTATTGCTCAAGTAG+AGG + chr3_2:6983514-6983533 Msa0393080:intron 25.0%
! CTGTTAATGTCTTTCAATAA+TGG - chr3_2:6983556-6983575 None:intergenic 25.0%
!! AAAGATGAAATCAAGGATTT+TGG - chr3_2:6983973-6983992 None:intergenic 25.0%
!!! TTCATCTTTTATTTCTGGAT+CGG + chr3_2:6983984-6984003 Msa0393080:intron 25.0%
!!! TTTTAAGATGATGAGATTGA+AGG - chr3_2:6984438-6984457 None:intergenic 25.0%
!!! ATTTTCTGGTCTAAGTAATT+TGG - chr3_2:6984533-6984552 None:intergenic 25.0%
! AAAATTCTTACTTGTGAAAG+GGG - chr3_2:6984580-6984599 None:intergenic 25.0%
!!! TTTTCATCAATTTAGTTTCC+GGG + chr3_2:6984762-6984781 Msa0393080:five_prime_UTR 25.0%
!!! AACAAAAGTGCTAACTTTAA+TGG + chr3_2:6984925-6984944 Msa0393080:five_prime_UTR 25.0%
!!! ACAAAAGTGCTAACTTTAAT+GGG + chr3_2:6984926-6984945 Msa0393080:five_prime_UTR 25.0%
!! TTTTCCTAATCTCTTAGAAA+TGG - chr3_2:6985061-6985080 None:intergenic 25.0%
! GATTAATAAGAATATTGGGT+TGG + chr3_2:6985191-6985210 Msa0393080:five_prime_UTR 25.0%
!! ATGAGATTCTTGATGATAAA+TGG + chr3_2:6985775-6985794 Msa0393080:five_prime_UTR 25.0%
!! TGAGATTCTTGATGATAAAT+GGG + chr3_2:6985776-6985795 Msa0393080:five_prime_UTR 25.0%
!! TTTAACTTATTAGGCTTGTT+TGG + chr3_2:6986018-6986037 Msa0393080:intron 25.0%
! AGACTGTTAAAGAGATATTA+TGG + chr3_2:6986081-6986100 Msa0393080:intron 25.0%
!!! TTAAGCTATTTTTGCAAACA+AGG + chr3_2:6986258-6986277 Msa0393080:intron 25.0%
!! TTTTGCAGTTTAACATGTTT+AGG + chr3_2:6986288-6986307 Msa0393080:intron 25.0%
! AATTGGTTATAAAGAGACAA+CGG - chr3_2:6986512-6986531 None:intergenic 25.0%
! GAAGTGAAAAACATGAAATT+AGG + chr3_2:6986634-6986653 Msa0393080:intron 25.0%
! AATAGAAGAATTCATTGTGA+AGG - chr3_2:6988012-6988031 None:intergenic 25.0%
! ATTCGCCAAAAGAAAAAAAA+AGG + chr3_2:6988245-6988264 Msa0393080:intron 25.0%
!!! TACTTATAGCTACTTTTATC+AGG - chr3_2:6988369-6988388 None:intergenic 25.0%
! TGATAAAAGTAGCTATAAGT+AGG + chr3_2:6988368-6988387 Msa0393080:intron 25.0%
! TCATTATGTGATCTTTCATA+AGG + chr3_2:6988599-6988618 Msa0393080:intron 25.0%
! CATTATGTGATCTTTCATAA+GGG + chr3_2:6988600-6988619 Msa0393080:intron 25.0%
! ATTATGTGATCTTTCATAAG+GGG + chr3_2:6988601-6988620 Msa0393080:intron 25.0%
! TCAAAATCGTAAATTGTTGT+GGG + chr3_2:6988851-6988870 Msa0393080:intron 25.0%
! TGAATAACAAGAAACAACTT+CGG - chr3_2:6989018-6989037 None:intergenic 25.0%
! ATTTACAAAAAAAAACTCGC+AGG - chr3_2:6989147-6989166 None:intergenic 25.0%
! AAATTTCTGTCAAGTACTAA+GGG - chr3_2:6989324-6989343 None:intergenic 25.0%
! TAAATTTCTGTCAAGTACTA+AGG - chr3_2:6989325-6989344 None:intergenic 25.0%
!!! ATGATAAGTTTTTAAGGAGA+GGG - chr3_2:6989516-6989535 None:intergenic 25.0%
!!! AATGATAAGTTTTTAAGGAG+AGG - chr3_2:6989517-6989536 None:intergenic 25.0%
! CCTATGCAAATAAATTACTT+TGG - chr3_2:6989800-6989819 None:intergenic 25.0%
! CCAAAGTAATTTATTTGCAT+AGG + chr3_2:6989797-6989816 Msa0393080:intron 25.0%
! TAAATGTTCTTGGAGTTATT+AGG + chr3_2:6989826-6989845 Msa0393080:intron 25.0%
! ATTCTATAATATCCTAGAGT+AGG - chr3_2:6989852-6989871 None:intergenic 25.0%
!! CATTTACATTTGTTTCTTGT+TGG + chr3_2:6990004-6990023 Msa0393080:intron 25.0%
!!! CGCTATTTCATATAACTTTT+TGG + chr3_2:6990116-6990135 Msa0393080:intron 25.0%
!!! GGTTTGCTATAAAAGTATTT+AGG + chr3_2:6990333-6990352 Msa0393080:intron 25.0%
!!! CCTTATTTTTGTTGTTTTTG+TGG - chr3_2:6990514-6990533 None:intergenic 25.0%
! CCACAAAAACAACAAAAATA+AGG + chr3_2:6990511-6990530 Msa0393080:intron 25.0%
! TTTCACGTAAAATGAAATAG+CGG + chr3_2:6990776-6990795 Msa0393080:intron 25.0%
! GAAGATTAAAATGAAACCAT+AGG - chr3_2:6990965-6990984 None:intergenic 25.0%
!! ACGAAAAAAATGATTTGGTC+TGG - chr3_2:6983118-6983137 None:intergenic 30.0%
!!! ACCAAATCATTTTTTTCGTG+AGG + chr3_2:6983119-6983138 Msa0393080:intron 30.0%
TCCTCACGAAAAAAATGATT+TGG - chr3_2:6983123-6983142 None:intergenic 30.0%
GAAGAAGAAAAACGAATAGA+GGG - chr3_2:6983199-6983218 None:intergenic 30.0%
GAGAAGGAATAACATGAAAA+GGG - chr3_2:6983221-6983240 None:intergenic 30.0%
AGAGAAGGAATAACATGAAA+AGG - chr3_2:6983222-6983241 None:intergenic 30.0%
ATGTTATTCCTTCTCTCTTA+TGG + chr3_2:6983226-6983245 Msa0393080:intron 30.0%
TGTTATTCCTTCTCTCTTAT+GGG + chr3_2:6983227-6983246 Msa0393080:intron 30.0%
TAGAATTCCGAATATTGACA+AGG - chr3_2:6984218-6984237 None:intergenic 30.0%
! ATTATCTTATGCTTTGTTGC+AGG + chr3_2:6984237-6984256 Msa0393080:intron 30.0%
ACTAGTATTCTACCATGAAA+TGG - chr3_2:6984284-6984303 None:intergenic 30.0%
! TTTGATAATTCTGTATTGGC+AGG + chr3_2:6984331-6984350 Msa0393080:intron 30.0%
ATGATGAGATTGAAGGAAAT+AGG - chr3_2:6984431-6984450 None:intergenic 30.0%
! AACAATCGAATGACATTTTC+TGG - chr3_2:6984547-6984566 None:intergenic 30.0%
ATGAAAGGAAGATGAATAGT+GGG - chr3_2:6984684-6984703 None:intergenic 30.0%
TTTGATGAGTGGAAATTTGT+GGG - chr3_2:6984725-6984744 None:intergenic 30.0%
! TTTTGATGAGTGGAAATTTG+TGG - chr3_2:6984726-6984745 None:intergenic 30.0%
!!! AATTTTGTGGTTTTGATGAG+TGG - chr3_2:6984736-6984755 None:intergenic 30.0%
! TTTTCATACCTTGACTTCTA+GGG + chr3_2:6984834-6984853 Msa0393080:intron 30.0%
CTGTTACTAGGTAGAAAAAT+TGG - chr3_2:6984874-6984893 None:intergenic 30.0%
GATTGCAAAATTCTGTTACT+AGG - chr3_2:6984979-6984998 None:intergenic 30.0%
! AGTAACAGAATTTTGCAATC+TGG + chr3_2:6984979-6984998 Msa0393080:five_prime_UTR 30.0%
! GTAACAGAATTTTGCAATCT+GGG + chr3_2:6984980-6984999 Msa0393080:five_prime_UTR 30.0%
CAATCTGGGTATTTGAATTT+GGG + chr3_2:6984994-6985013 Msa0393080:five_prime_UTR 30.0%
! TCTTCCATTTCTAAGAGATT+AGG + chr3_2:6985054-6985073 Msa0393080:five_prime_UTR 30.0%
TCTCAAGGTTGTAACTTTAA+TGG + chr3_2:6985117-6985136 Msa0393080:five_prime_UTR 30.0%
CTCAAGGTTGTAACTTTAAT+GGG + chr3_2:6985118-6985137 Msa0393080:five_prime_UTR 30.0%
!! GTAAAGGTGTTAGCTTTAAA+AGG + chr3_2:6985217-6985236 Msa0393080:five_prime_UTR 30.0%
ATTTCAAGAGATTAGACAAC+AGG + chr3_2:6985259-6985278 Msa0393080:five_prime_UTR 30.0%
TTTCAAGAGATTAGACAACA+GGG + chr3_2:6985260-6985279 Msa0393080:five_prime_UTR 30.0%
!! TTTTAGGAGATTGTACTATG+TGG + chr3_2:6985302-6985321 Msa0393080:five_prime_UTR 30.0%
!! AACTGTGTATTTTGGGAATA+TGG + chr3_2:6985428-6985447 Msa0393080:five_prime_UTR 30.0%
AAATGTGTTCTCTTCGTATA+AGG - chr3_2:6985462-6985481 None:intergenic 30.0%
!! ACATTTGGATGGATTGAATT+GGG + chr3_2:6985851-6985870 Msa0393080:five_prime_UTR 30.0%
CTTAAGCGCTTATATGATAT+AGG + chr3_2:6986215-6986234 Msa0393080:intron 30.0%
GACTCATTTCATTGATACAT+AGG + chr3_2:6986562-6986581 Msa0393080:intron 30.0%
! ATAGGTAATGTTTGTTAGAC+AGG + chr3_2:6986580-6986599 Msa0393080:intron 30.0%
TTTGTTAGACAGGTTAGAAT+AGG + chr3_2:6986590-6986609 Msa0393080:intron 30.0%
AAAAGAGACAAACAAAAGGT+GGG - chr3_2:6987046-6987065 None:intergenic 30.0%
TAAAAGAGACAAACAAAAGG+TGG - chr3_2:6987047-6987066 None:intergenic 30.0%
TAAAAGAGACAAACAAATGG+TGG - chr3_2:6987132-6987151 None:intergenic 30.0%
TCTAATCATAGTTGTCAAAG+CGG - chr3_2:6987911-6987930 None:intergenic 30.0%
GCTACATGACTAAACATATA+GGG - chr3_2:6987975-6987994 None:intergenic 30.0%
TGCTACATGACTAAACATAT+AGG - chr3_2:6987976-6987995 None:intergenic 30.0%
!!! TCATGTAGCAATGTTGTTTT+AGG + chr3_2:6987986-6988005 Msa0393080:intron 30.0%
! TTGTGTTTGATTTCGTCTTA+TGG - chr3_2:6988039-6988058 None:intergenic 30.0%
ATTTGAATGTAGTATGAGCA+TGG + chr3_2:6988069-6988088 Msa0393080:intron 30.0%
!!! TGCGACCTTTTTTTTTCTTT+TGG - chr3_2:6988253-6988272 None:intergenic 30.0%
! GAAAAAAAAAGGTCGCATTT+TGG + chr3_2:6988256-6988275 Msa0393080:intron 30.0%
TGAAATTGGTAGAATCACAA+TGG + chr3_2:6988505-6988524 Msa0393080:intron 30.0%
GTCAAAATCGTAAATTGTTG+TGG + chr3_2:6988850-6988869 Msa0393080:intron 30.0%
CTTATTTCAGTAGAAAAGCT+TGG - chr3_2:6988923-6988942 None:intergenic 30.0%
GATAGATGAACCTTCAAAAT+AGG + chr3_2:6989088-6989107 Msa0393080:intron 30.0%
!! GAAGTTACTTCCTATTTTGA+AGG - chr3_2:6989101-6989120 None:intergenic 30.0%
AGGAAGTAACTTCAATTTGT+AGG + chr3_2:6989108-6989127 Msa0393080:intron 30.0%
AAAAAAAAACTCGCAGGTAT+GGG - chr3_2:6989141-6989160 None:intergenic 30.0%
!! TATGAAGTGTTGCCAAATAT+CGG + chr3_2:6989169-6989188 Msa0393080:intron 30.0%
CAACACAAAAACTGTACATA+TGG - chr3_2:6989285-6989304 None:intergenic 30.0%
! CATATGTACAGTTTTTGTGT+TGG + chr3_2:6989283-6989302 Msa0393080:intron 30.0%
ACCAACCTCTAAATATGAAT+TGG + chr3_2:6989414-6989433 Msa0393080:intron 30.0%
TCCAATTCATATTTAGAGGT+TGG - chr3_2:6989418-6989437 None:intergenic 30.0%
! TATGGATGTAATTTGTGAGT+AGG - chr3_2:6989616-6989635 None:intergenic 30.0%
GCATGGAATTAATGCAAATA+TGG - chr3_2:6989634-6989653 None:intergenic 30.0%
TTAATTCCATGCTTAGTAGA+AGG + chr3_2:6989642-6989661 Msa0393080:intron 30.0%
TAGGAATGCTTAAATGTTCT+TGG + chr3_2:6989816-6989835 Msa0393080:intron 30.0%
TGGATCATAGTAGTTAATAG+CGG + chr3_2:6990031-6990050 Msa0393080:intron 30.0%
ACTTTGTGAATGTAATGAAG+TGG - chr3_2:6990259-6990278 None:intergenic 30.0%
TTGTTTGGCAATTTAATCAC+TGG - chr3_2:6990389-6990408 None:intergenic 30.0%
!! AAAACAGAGGATGCTTTTTA+GGG + chr3_2:6990561-6990580 Msa0393080:intron 30.0%
AGAGAAGATTTAATGAAGAG+AGG + chr3_2:6990603-6990622 Msa0393080:intron 30.0%
CTTCCTTCTTTCATTCTTTA+CGG - chr3_2:6990670-6990689 None:intergenic 30.0%
TGAAAATACAAGATTCTCCT+TGG - chr3_2:6990761-6990780 None:intergenic 30.0%
! TGTTGGTTAGATAGTCAAAA+TGG - chr3_2:6991050-6991069 None:intergenic 30.0%
!!! TTTTCCACATTTTTTCAGGA+TGG + chr3_2:6991247-6991266 Msa0393080:intron 30.0%
ATTTCCATCCTGAAAAAATG+TGG - chr3_2:6991254-6991273 None:intergenic 30.0%
GAAATTGAAGCTGATTACAT+TGG + chr3_2:6991269-6991288 Msa0393080:CDS 30.0%
TTGAGAAAACAAGACGCATT+TGG + chr3_2:6983080-6983099 Msa0393080:five_prime_UTR 35.0%
!! AATGATTTGGTCTGGTGATA+AGG - chr3_2:6983110-6983129 None:intergenic 35.0%
GGAAGAAGAAAAACGAATAG+AGG - chr3_2:6983200-6983219 None:intergenic 35.0%
TAGAAAGAGAAAGAGAGAAG+CGG - chr3_2:6983756-6983775 None:intergenic 35.0%
GCTATTAAACAGATCAAGGA+TGG - chr3_2:6983805-6983824 None:intergenic 35.0%
AAGAAGAAGAAGACAGATCA+AGG - chr3_2:6983856-6983875 None:intergenic 35.0%
CTTATGATAGCTCAATCTCA+AGG - chr3_2:6984176-6984195 None:intergenic 35.0%
CATGGTAGAATACTAGTCAT+TGG + chr3_2:6984287-6984306 Msa0393080:intron 35.0%
! TGTATTGGCAGGAGTAAAAT+TGG + chr3_2:6984342-6984361 Msa0393080:intron 35.0%
TTTGATCTTCCTATCCTTGT+CGG - chr3_2:6984377-6984396 None:intergenic 35.0%
! AGATGAATAGTGGGAGAAAA+TGG - chr3_2:6984675-6984694 None:intergenic 35.0%
CATGAAAGGAAGATGAATAG+TGG - chr3_2:6984685-6984704 None:intergenic 35.0%
! GTTTTCATACCTTGACTTCT+AGG + chr3_2:6984833-6984852 Msa0393080:intron 35.0%
CAATCTGGGTATTTGAATCT+GGG + chr3_2:6984901-6984920 Msa0393080:five_prime_UTR 35.0%
GCAATCTGGGTATTTGAATT+TGG + chr3_2:6984993-6985012 Msa0393080:five_prime_UTR 35.0%
CACATTAAAGCTAGCATCTT+TGG - chr3_2:6985022-6985041 None:intergenic 35.0%
!! AATATTAGGGTTGGTTCTCA+AGG + chr3_2:6985102-6985121 Msa0393080:five_prime_UTR 35.0%
!! AATATTGGGTTGGGTTGTAA+AGG + chr3_2:6985201-6985220 Msa0393080:five_prime_UTR 35.0%
TTCAAGAGATTAGACAACAG+GGG + chr3_2:6985261-6985280 Msa0393080:five_prime_UTR 35.0%
! TTAAAATGCCGCACATTTTG+AGG - chr3_2:6985330-6985349 None:intergenic 35.0%
!! GGATTCTGAAACCAATTCTT+TGG - chr3_2:6985363-6985382 None:intergenic 35.0%
! AGAATTGGTTTCAGAATCCT+AGG + chr3_2:6985364-6985383 Msa0393080:five_prime_UTR 35.0%
AATCCTAGGCATGTTATGAT+TGG + chr3_2:6985378-6985397 Msa0393080:five_prime_UTR 35.0%
ATACCAATCATAACATGCCT+AGG - chr3_2:6985384-6985403 None:intergenic 35.0%
GCATGTTATGATTGGTATAG+TGG + chr3_2:6985386-6985405 Msa0393080:five_prime_UTR 35.0%
GTTATGATTGGTATAGTGGT+TGG + chr3_2:6985390-6985409 Msa0393080:five_prime_UTR 35.0%
!!! GATTTTGATTCCGAAAGAGA+TGG + chr3_2:6985482-6985501 Msa0393080:five_prime_UTR 35.0%
ATCTTCTTCTCCATCTCTTT+CGG - chr3_2:6985495-6985514 None:intergenic 35.0%
AAAGAGATGGAGAAGAAGAT+TGG + chr3_2:6985495-6985514 Msa0393080:five_prime_UTR 35.0%
AAGAGATGGAGAAGAAGATT+GGG + chr3_2:6985496-6985515 Msa0393080:five_prime_UTR 35.0%
!! AAGATGAAGGCAGGTTTTAA+GGG + chr3_2:6985534-6985553 Msa0393080:five_prime_UTR 35.0%
!! ATTGTTGAAGCTTTGAAGAG+AGG + chr3_2:6985615-6985634 Msa0393080:five_prime_UTR 35.0%
!! TTGTTGAAGCTTTGAAGAGA+GGG + chr3_2:6985616-6985635 Msa0393080:five_prime_UTR 35.0%
GCTTCAGAAAATACTGTGTT+TGG + chr3_2:6985675-6985694 Msa0393080:five_prime_UTR 35.0%
! TACTGTGTTTGGTGAAGAAA+AGG + chr3_2:6985686-6985705 Msa0393080:five_prime_UTR 35.0%
! ACTGTGTTTGGTGAAGAAAA+GGG + chr3_2:6985687-6985706 Msa0393080:five_prime_UTR 35.0%
!! ATTAGTGCATTGACTGAAAG+TGG + chr3_2:6985720-6985739 Msa0393080:five_prime_UTR 35.0%
! ATAAATGGGTTCAGAAGAGT+AGG + chr3_2:6985790-6985809 Msa0393080:five_prime_UTR 35.0%
GTTCAGAAGAGTAGGAAAAA+GGG + chr3_2:6985798-6985817 Msa0393080:five_prime_UTR 35.0%
!! CACATTTGGATGGATTGAAT+TGG + chr3_2:6985850-6985869 Msa0393080:five_prime_UTR 35.0%
! TGGATTGAATTGGGAGATTT+TGG + chr3_2:6985860-6985879 Msa0393080:five_prime_UTR 35.0%
! ATTGAATTGGGAGATTTTGG+TGG + chr3_2:6985863-6985882 Msa0393080:five_prime_UTR 35.0%
!! AAGCAAAAGGCATTAACCAT+AGG - chr3_2:6985897-6985916 None:intergenic 35.0%
TGGGAAGATAGTTGTGTTTA+CGG + chr3_2:6985923-6985942 Msa0393080:five_prime_UTR 35.0%
GCAGAGATAGCAACTATTAT+TGG + chr3_2:6985972-6985991 Msa0393080:five_prime_UTR 35.0%
AGCAACTATTATTGGACATG+AGG + chr3_2:6985980-6985999 Msa0393080:five_prime_UTR 35.0%
!! GACATAGTGTTGACAATATC+AGG - chr3_2:6986444-6986463 None:intergenic 35.0%
CTATGTCATCACTTCTCTTA+CGG + chr3_2:6986457-6986476 Msa0393080:five_prime_UTR 35.0%
! AATGATTACCTTCTGGAGAA+AGG - chr3_2:6986486-6986505 None:intergenic 35.0%
ACTTGAATTAGTGGAACTAG+AGG + chr3_2:6986676-6986695 Msa0393080:intron 35.0%
!!! ACTGTGTTTTGGTCTTTTGA+AGG + chr3_2:6986917-6986936 Msa0393080:intron 35.0%
AGCGTGGCCAAAATAATAAA+AGG - chr3_2:6988282-6988301 None:intergenic 35.0%
GCTTTCAAAGTTGAAGTGTA+CGG + chr3_2:6988481-6988500 Msa0393080:intron 35.0%
TTGAAGTGTACGGTTGAAAT+TGG + chr3_2:6988491-6988510 Msa0393080:intron 35.0%
TGAAGACTGATCGATAAAAC+AGG + chr3_2:6988572-6988591 Msa0393080:intron 35.0%
GAAGACTGATCGATAAAACA+GGG + chr3_2:6988573-6988592 Msa0393080:intron 35.0%
AAACACAAACGCAAACTAGA+CGG + chr3_2:6988713-6988732 Msa0393080:intron 35.0%
CATGTGACTCAGCTTAAAAA+GGG - chr3_2:6989064-6989083 None:intergenic 35.0%
!! CTTTTTAAGCTGAGTCACAT+GGG + chr3_2:6989063-6989082 Msa0393080:intron 35.0%
CAAAAAAAAACTCGCAGGTA+TGG - chr3_2:6989142-6989161 None:intergenic 35.0%
AGAAAGCCAAAATATTGCCA+TGG - chr3_2:6989195-6989214 None:intergenic 35.0%
!!! AATATTTTGGCTTTCTGCCA+TGG + chr3_2:6989199-6989218 Msa0393080:intron 35.0%
!! AGAGTCAGTGTAATGGATTA+AGG - chr3_2:6989233-6989252 None:intergenic 35.0%
! TCATATTTAGAGGTTGGTCA+TGG - chr3_2:6989412-6989431 None:intergenic 35.0%
GACTATAGTGAGTCTGATTT+CGG + chr3_2:6989945-6989964 Msa0393080:intron 35.0%
! ATTTGTTTCTTGTTGGACTG+TGG + chr3_2:6990011-6990030 Msa0393080:intron 35.0%
!! TAGTAGTTAATAGCGGATAG+CGG + chr3_2:6990038-6990057 Msa0393080:intron 35.0%
! TATCCCGCTATAGCATTTTT+GGG - chr3_2:6990079-6990098 None:intergenic 35.0%
TTGGCAATTTAATCACTGGA+AGG - chr3_2:6990385-6990404 None:intergenic 35.0%
GTGATAATCTCGACATTGTT+TGG - chr3_2:6990404-6990423 None:intergenic 35.0%
AACAATGTCGAGATTATCAC+CGG + chr3_2:6990404-6990423 Msa0393080:intron 35.0%
ATAGAGGATGAACAAAACAG+AGG + chr3_2:6990548-6990567 Msa0393080:intron 35.0%
!! CAAAACAGAGGATGCTTTTT+AGG + chr3_2:6990560-6990579 Msa0393080:intron 35.0%
CACAGCATAGTAGTTAATAG+CGG - chr3_2:6990935-6990954 None:intergenic 35.0%
!!! TGTGCTTCATTTTAACTTCG+TGG + chr3_2:6990998-6991017 Msa0393080:intron 35.0%
TACACAAATGTGGTGAATGA+TGG + chr3_2:6991171-6991190 Msa0393080:intron 35.0%
GAGAAGTTGGGAAAAATATC+CGG + chr3_2:6991347-6991366 Msa0393080:CDS 35.0%
ATCTAAAAGCTTAGAATCGC+CGG - chr3_2:6991369-6991388 None:intergenic 35.0%
AAGAAAACGAGCAGAATTAC+TGG + chr3_2:6991412-6991431 Msa0393080:CDS 35.0%
AAGAATGTAAGAGAAGGACA+TGG + chr3_2:6991473-6991492 Msa0393080:CDS 35.0%
! TGGTGTTGAAGGATTTCTTT+AGG + chr3_2:6991493-6991512 Msa0393080:CDS 35.0%
CTGCATGTTTCCAAATTAAC+TGG + chr3_2:6991611-6991630 Msa0393080:three_prime_UTR 35.0%
AGAGTAACAGATTTCAAGAG+TGG - chr3_2:6991667-6991686 None:intergenic 35.0%
CTACTTTCAAGGCTCAATAG+CGG + chr3_2:6983317-6983336 Msa0393080:intron 40.0%
AGAAATTTATCTGGGCCCTA+GGG - chr3_2:6983680-6983699 None:intergenic 40.0%
TAGAAATTTATCTGGGCCCT+AGG - chr3_2:6983681-6983700 None:intergenic 40.0%
AGGAAGACTGTCATCAAACT+AGG - chr3_2:6983713-6983732 None:intergenic 40.0%
TTAAACAGATCAAGGATGGC+TGG - chr3_2:6983801-6983820 None:intergenic 40.0%
GGCTGCTATTAAACAGATCA+AGG - chr3_2:6983809-6983828 None:intergenic 40.0%
AGGAATGAAGATGAAACGCA+TGG - chr3_2:6983830-6983849 None:intergenic 40.0%
AAGAAGACAGATCAAGGATG+AGG - chr3_2:6983850-6983869 None:intergenic 40.0%
GAGAGAGAAGTAGAAATGCA+TGG - chr3_2:6983883-6983902 None:intergenic 40.0%
TGCCCAAAAAAACGCTATCT+CGG + chr3_2:6984106-6984125 Msa0393080:intron 40.0%
CGCTTGACCTTGTCAATATT+CGG + chr3_2:6984208-6984227 Msa0393080:intron 40.0%
! ATTGGTAATCAAAGCCGACA+AGG + chr3_2:6984360-6984379 Msa0393080:five_prime_UTR 40.0%
TAATCAAAGCCGACAAGGAT+AGG + chr3_2:6984365-6984384 Msa0393080:five_prime_UTR 40.0%
TCTTACTTGTGAAAGGGGAA+AGG - chr3_2:6984575-6984594 None:intergenic 40.0%
!! GATGTAGAAAGAGTGTTCAC+GGG - chr3_2:6984649-6984668 None:intergenic 40.0%
!! GGATGTAGAAAGAGTGTTCA+CGG - chr3_2:6984650-6984669 None:intergenic 40.0%
! GAATAGTGGGAGAAAATGGA+AGG - chr3_2:6984671-6984690 None:intergenic 40.0%
! GCTTTGGATTGAAGCATGAA+AGG - chr3_2:6984699-6984718 None:intergenic 40.0%
GGAAATTTGTGGGTATGCTT+TGG - chr3_2:6984715-6984734 None:intergenic 40.0%
TTTCCGGGTTCTTTCAATCA+TGG + chr3_2:6984777-6984796 Msa0393080:five_prime_UTR 40.0%
AAGCCATGATTGAAAGAACC+CGG - chr3_2:6984783-6984802 None:intergenic 40.0%
!! ATCATGGCTTGGTATAGAAG+AGG + chr3_2:6984793-6984812 Msa0393080:five_prime_UTR 40.0%
! AGAGGAAAGCTTGTTCTTGA+TGG + chr3_2:6984811-6984830 Msa0393080:five_prime_UTR 40.0%
AGATGAAACCCTAGAAGTCA+AGG - chr3_2:6984845-6984864 None:intergenic 40.0%
GATTGCAACGTTCTGTTACT+AGG - chr3_2:6984886-6984905 None:intergenic 40.0%
AGTAACAGAACGTTGCAATC+TGG + chr3_2:6984886-6984905 Msa0393080:five_prime_UTR 40.0%
GTAACAGAACGTTGCAATCT+GGG + chr3_2:6984887-6984906 Msa0393080:five_prime_UTR 40.0%
GCAATCTGGGTATTTGAATC+TGG + chr3_2:6984900-6984919 Msa0393080:five_prime_UTR 40.0%
ATGTGGATCCTCAAAATGTG+CGG + chr3_2:6985319-6985338 Msa0393080:five_prime_UTR 40.0%
! ATTGGTATAGTGGTTGGTTC+TGG + chr3_2:6985396-6985415 Msa0393080:five_prime_UTR 40.0%
AGAGATGGAGAAGAAGATTG+GGG + chr3_2:6985497-6985516 Msa0393080:five_prime_UTR 40.0%
GAGAGAGTTTGAGAAGATGA+AGG + chr3_2:6985521-6985540 Msa0393080:five_prime_UTR 40.0%
! GAAGATGAAGGCAGGTTTTA+AGG + chr3_2:6985533-6985552 Msa0393080:five_prime_UTR 40.0%
!!! AGATGAAGGCAGGTTTTAAG+GGG + chr3_2:6985535-6985554 Msa0393080:five_prime_UTR 40.0%
TCCTCACTCTTACACTTTCA+GGG - chr3_2:6985581-6985600 None:intergenic 40.0%
ATCCTCACTCTTACACTTTC+AGG - chr3_2:6985582-6985601 None:intergenic 40.0%
TTTGAAGAGAGGGTTGAGTA+AGG + chr3_2:6985626-6985645 Msa0393080:five_prime_UTR 40.0%
! CTGTGTTTGGTGAAGAAAAG+GGG + chr3_2:6985688-6985707 Msa0393080:five_prime_UTR 40.0%
AAAGTGGAGGGAAAGTTGAA+GGG + chr3_2:6985736-6985755 Msa0393080:five_prime_UTR 40.0%
AAGTTGAAGGGAATTGGCAT+CGG + chr3_2:6985748-6985767 Msa0393080:five_prime_UTR 40.0%
GGTTCAGAAGAGTAGGAAAA+AGG + chr3_2:6985797-6985816 Msa0393080:five_prime_UTR 40.0%
GCAACCTAATACGTCACATT+TGG + chr3_2:6985836-6985855 Msa0393080:five_prime_UTR 40.0%
CCATCCAAATGTGACGTATT+AGG - chr3_2:6985843-6985862 None:intergenic 40.0%
CCTAATACGTCACATTTGGA+TGG + chr3_2:6985840-6985859 Msa0393080:five_prime_UTR 40.0%
!! TTTGGTGGTGAATGATCCTA+TGG + chr3_2:6985878-6985897 Msa0393080:five_prime_UTR 40.0%
! GTTAATGCCTTTTGCTTACC+TGG + chr3_2:6985900-6985919 Msa0393080:five_prime_UTR 40.0%
GGGAAGATAGTTGTGTTTAC+GGG + chr3_2:6985924-6985943 Msa0393080:five_prime_UTR 40.0%
AAGTCTAACACTTTGCTGCT+TGG + chr3_2:6986318-6986337 Msa0393080:intron 40.0%
! CACTTTGCTGCTTGGTAATT+AGG + chr3_2:6986326-6986345 Msa0393080:intron 40.0%
! TTGCTGCTTGGTAATTAGGT+TGG + chr3_2:6986330-6986349 Msa0393080:intron 40.0%
!! TAATTAGGTTGGACATGCTG+TGG + chr3_2:6986341-6986360 Msa0393080:intron 40.0%
AGGGGATGACAAAGAATATG+TGG + chr3_2:6986379-6986398 Msa0393080:five_prime_UTR 40.0%
GGGGATGACAAAGAATATGT+GGG + chr3_2:6986380-6986399 Msa0393080:five_prime_UTR 40.0%
TGGTTATAAAGAGACAACGG+AGG - chr3_2:6986509-6986528 None:intergenic 40.0%
AGAATCTCTGTTGTCAAACG+CGG + chr3_2:6986703-6986722 Msa0393080:intron 40.0%
! AGACCAAAACACAGTCGTTT+TGG - chr3_2:6986912-6986931 None:intergenic 40.0%
!!! GTGTTTTGGTCTTTTGAAGG+TGG + chr3_2:6986920-6986939 Msa0393080:intron 40.0%
GGAAGATGAAAGAGAAGAAG+AGG + chr3_2:6986984-6987003 Msa0393080:intron 40.0%
!! ACAACGTTTTAGCATGTGAG+TGG + chr3_2:6987014-6987033 Msa0393080:intron 40.0%
!! TCCCTGTTTGTCTTTTGAGA+AGG + chr3_2:6987234-6987253 Msa0393080:intron 40.0%
GCCTTCTCAAAAGACAAACA+GGG - chr3_2:6987238-6987257 None:intergenic 40.0%
TGCCTTCTCAAAAGACAAAC+AGG - chr3_2:6987239-6987258 None:intergenic 40.0%
! GTTTGATTTCGTCTTATGGC+AGG - chr3_2:6988035-6988054 None:intergenic 40.0%
!! ACTTGTTTTCTGCACATCCT+CGG + chr3_2:6988172-6988191 Msa0393080:intron 40.0%
AGTCATACCAAGTCCATACA+AGG - chr3_2:6988201-6988220 None:intergenic 40.0%
ATCTATATCACCGTACAACC+CGG + chr3_2:6988395-6988414 Msa0393080:intron 40.0%
CAGATATAAGAGCAGATAGC+TGG + chr3_2:6988759-6988778 Msa0393080:intron 40.0%
! TGGGATCGTAACACAGATTT+TGG + chr3_2:6988870-6988889 Msa0393080:intron 40.0%
AGCAAGGAGGTCATAAAGAT+CGG - chr3_2:6988993-6989012 None:intergenic 40.0%
CCATGTGACTCAGCTTAAAA+AGG - chr3_2:6989065-6989084 None:intergenic 40.0%
!! CCTTTTTAAGCTGAGTCACA+TGG + chr3_2:6989062-6989081 Msa0393080:intron 40.0%
ATATTGCCATGGCCGATATT+TGG - chr3_2:6989184-6989203 None:intergenic 40.0%
! TATCGGCCATGGCAATATTT+TGG + chr3_2:6989186-6989205 Msa0393080:intron 40.0%
GGATTAAGGATGACAAACCA+TGG - chr3_2:6989219-6989238 None:intergenic 40.0%
TGCTTGTAGAGTCAGTGTAA+TGG - chr3_2:6989240-6989259 None:intergenic 40.0%
! GAAGCATTCATTAGCCCAAA+TGG + chr3_2:6989469-6989488 Msa0393080:intron 40.0%
! CATGCTTGGTTATGCCATTT+GGG - chr3_2:6989486-6989505 None:intergenic 40.0%
ACATGCTTGGTTATGCCATT+TGG - chr3_2:6989487-6989506 None:intergenic 40.0%
GTAAAGCAGTGCAACTCAAA+GGG - chr3_2:6989549-6989568 None:intergenic 40.0%
ATGATGCCTTCTACTAAGCA+TGG - chr3_2:6989651-6989670 None:intergenic 40.0%
! ATCCCGCTATAGCATTTTTG+GGG - chr3_2:6990078-6990097 None:intergenic 40.0%
! CTATCCCGCTATAGCATTTT+TGG - chr3_2:6990080-6990099 None:intergenic 40.0%
! GACTTGGTTACAACTCAGTT+GGG - chr3_2:6990234-6990253 None:intergenic 40.0%
! AGACTTGGTTACAACTCAGT+TGG - chr3_2:6990235-6990254 None:intergenic 40.0%
ATGTAATGAAGTGGCAGACT+TGG - chr3_2:6990250-6990269 None:intergenic 40.0%
ATGCAAACCTCTCAGCAATT+TGG + chr3_2:6990293-6990312 Msa0393080:intron 40.0%
TGCAAACCTCTCAGCAATTT+GGG + chr3_2:6990294-6990313 Msa0393080:intron 40.0%
TTGGGATCTGTCTCAATTTC+TGG + chr3_2:6990312-6990331 Msa0393080:intron 40.0%
ATTGATTGAACACCAGAAGC+TGG + chr3_2:6990356-6990375 Msa0393080:intron 40.0%
TTGATTGAACACCAGAAGCT+GGG + chr3_2:6990357-6990376 Msa0393080:intron 40.0%
CATGTGCTCAAAGACATAAG+TGG - chr3_2:6990431-6990450 None:intergenic 40.0%
GTTTGATTGAACACCAGAAC+CGG + chr3_2:6990467-6990486 Msa0393080:intron 40.0%
! TTTTGTGGACAACACAGTCA+TGG - chr3_2:6990499-6990518 None:intergenic 40.0%
CGCTATTAACTACTATGCTG+TGG + chr3_2:6990933-6990952 Msa0393080:intron 40.0%
!! TATGCTGTGGATTAGTCCTA+TGG + chr3_2:6990946-6990965 Msa0393080:intron 40.0%
TGCTTAAAAGTAGCCATGTC+AGG - chr3_2:6991076-6991095 None:intergenic 40.0%
ACCTAAAGTCTACGAGAAGT+TGG + chr3_2:6991334-6991353 Msa0393080:CDS 40.0%
CCTAAAGTCTACGAGAAGTT+GGG + chr3_2:6991335-6991354 Msa0393080:CDS 40.0%
! TATTTTGCCACTCATCCATC+TGG + chr3_2:6991389-6991408 Msa0393080:CDS 40.0%
! TTTTCTTCCAGATGGATGAG+TGG - chr3_2:6991399-6991418 None:intergenic 40.0%
ACATTCCTCCTACATTGTGT+TGG + chr3_2:6991584-6991603 Msa0393080:three_prime_UTR 40.0%
CATTCCTCCTACATTGTGTT+GGG + chr3_2:6991585-6991604 Msa0393080:three_prime_UTR 40.0%
GGCAACAGATCCAGTTAATT+TGG - chr3_2:6991624-6991643 None:intergenic 40.0%
ATCAAGTGCAGAAGAAGCAA+TGG + chr3_2:6991697-6991716 Msa0393080:three_prime_UTR 40.0%
! TGCAGAAGAAGCAATGGATT+AGG + chr3_2:6991703-6991722 Msa0393080:three_prime_UTR 40.0%
!! AGAAGAAGCAATGGATTAGG+TGG + chr3_2:6991706-6991725 Msa0393080:three_prime_UTR 40.0%
CTGCAAGTGAATACATTGCA+TGG + chr3_2:6991733-6991752 Msa0393080:three_prime_UTR 40.0%
GCTGAAGCTGACAGATAATT+TGG + chr3_2:6991760-6991779 Msa0393080:three_prime_UTR 40.0%
ATTACTATGCACTGAGTCAC+TGG + chr3_2:6991806-6991825 Msa0393080:three_prime_UTR 40.0%
! TGGTGATGTGAGAGATTGAG+CGG - chr3_2:6983013-6983032 None:intergenic 45.0%
!! CATCAAAAGGTGATGGACAG+TGG - chr3_2:6983033-6983052 None:intergenic 45.0%
GATCTGGCATCAAAAGGTGA+TGG - chr3_2:6983040-6983059 None:intergenic 45.0%
! TCACCTTTTGATGCCAGATC+CGG + chr3_2:6983040-6983059 Msa0393080:five_prime_UTR 45.0%
GAAGGAACCCATAAGAGAGA+AGG - chr3_2:6983237-6983256 None:intergenic 45.0%
GAAATTTATCTGGGCCCTAG+GGG - chr3_2:6983679-6983698 None:intergenic 45.0%
CTTCCTTCTTTCCTCATGTG+CGG + chr3_2:6983727-6983746 Msa0393080:intron 45.0%
GCTGGAAGAAGAAGAAGACA+GGG - chr3_2:6983783-6983802 None:intergenic 45.0%
GAGAAGTAGAAATGCATGGC+TGG - chr3_2:6983879-6983898 None:intergenic 45.0%
AGAGAGAGAGAGAGAGAGAA+AGG - chr3_2:6983917-6983936 None:intergenic 45.0%
GCCCAAAAAAACGCTATCTC+GGG + chr3_2:6984107-6984126 Msa0393080:intron 45.0%
!!! GCCCGAGATAGCGTTTTTTT+GGG - chr3_2:6984111-6984130 None:intergenic 45.0%
GGGTTCTTTCAATCATGGCT+TGG + chr3_2:6984782-6984801 Msa0393080:five_prime_UTR 45.0%
! TGCGGCATTTTAAGCCAAGA+GGG + chr3_2:6985337-6985356 Msa0393080:five_prime_UTR 45.0%
AACCAATTCTTTGGCCCTCT+TGG - chr3_2:6985354-6985373 None:intergenic 45.0%
GAGTTTGAGAAGATGAAGGC+AGG + chr3_2:6985525-6985544 Msa0393080:five_prime_UTR 45.0%
! ACCCTGAAAGTGTAAGAGTG+AGG + chr3_2:6985577-6985596 Msa0393080:five_prime_UTR 45.0%
GGTTGAGTAAGGAGAATGTG+TGG + chr3_2:6985637-6985656 Msa0393080:five_prime_UTR 45.0%
! GTTTGGTGAAGAAAAGGGGA+AGG + chr3_2:6985692-6985711 Msa0393080:five_prime_UTR 45.0%
!! AGTGCATTGACTGAAAGTGG+AGG + chr3_2:6985723-6985742 Msa0393080:five_prime_UTR 45.0%
!! GTGCATTGACTGAAAGTGGA+GGG + chr3_2:6985724-6985743 Msa0393080:five_prime_UTR 45.0%
GAAAGTGGAGGGAAAGTTGA+AGG + chr3_2:6985735-6985754 Msa0393080:five_prime_UTR 45.0%
GAGGGAAAGTTGAAGGGAAT+TGG + chr3_2:6985742-6985761 Msa0393080:five_prime_UTR 45.0%
AGTTGAAGGGAATTGGCATC+GGG + chr3_2:6985749-6985768 Msa0393080:five_prime_UTR 45.0%
GAAGAGTAGGAAAAAGGGTC+AGG + chr3_2:6985803-6985822 Msa0393080:five_prime_UTR 45.0%
! AATGCCTTTTGCTTACCTGG+TGG + chr3_2:6985903-6985922 Msa0393080:five_prime_UTR 45.0%
! ATGCCTTTTGCTTACCTGGT+GGG + chr3_2:6985904-6985923 Msa0393080:five_prime_UTR 45.0%
AACACAACTATCTTCCCACC+AGG - chr3_2:6985921-6985940 None:intergenic 45.0%
ACGGAGGAATGATTACCTTC+TGG - chr3_2:6986493-6986512 None:intergenic 45.0%
! TTTGTGAAAAGCGGGTTTCG+CGG + chr3_2:6986799-6986818 Msa0393080:intron 45.0%
! GAGCCAAAACGACTGTGTTT+TGG + chr3_2:6986906-6986925 Msa0393080:intron 45.0%
CGATTTCAGATCTGAGTTGC+AGG + chr3_2:6986947-6986966 Msa0393080:intron 45.0%
!! ACGTTTTAGCATGTGAGTGG+TGG + chr3_2:6987017-6987036 Msa0393080:intron 45.0%
ACAAACAGGGAGTAGAGTAG+TGG - chr3_2:6987225-6987244 None:intergenic 45.0%
TAGTTGTCAAAGCGGAAACG+CGG - chr3_2:6987903-6987922 None:intergenic 45.0%
CAGAAAACAAGTCTGCTCTC+GGG - chr3_2:6988164-6988183 None:intergenic 45.0%
GCAGAAAACAAGTCTGCTCT+CGG - chr3_2:6988165-6988184 None:intergenic 45.0%
AGGGAGATCATAAAGGTTGG+TGG - chr3_2:6988961-6988980 None:intergenic 45.0%
AGCAGGGAGATCATAAAGGT+TGG - chr3_2:6988964-6988983 None:intergenic 45.0%
AGGAGGTCATAAAGATCGGT+GGG - chr3_2:6988989-6989008 None:intergenic 45.0%
AAGGAGGTCATAAAGATCGG+TGG - chr3_2:6988990-6989009 None:intergenic 45.0%
AGAAACAACTTCGGCTAGCA+AGG - chr3_2:6989009-6989028 None:intergenic 45.0%
GGTAAAGCAGTGCAACTCAA+AGG - chr3_2:6989550-6989569 None:intergenic 45.0%
! TTGAGTTGCACTGCTTTACC+TGG + chr3_2:6989550-6989569 Msa0393080:intron 45.0%
TACTGCAGAATTTACGCACC+AGG - chr3_2:6989571-6989590 None:intergenic 45.0%
GGAGTTATTAGGCCTACTCT+AGG + chr3_2:6989837-6989856 Msa0393080:intron 45.0%
!!! CGCTATAGCATTTTTGGGGT+CGG - chr3_2:6990074-6990093 None:intergenic 45.0%
CGACCCCAAAAATGCTATAG+CGG + chr3_2:6990072-6990091 Msa0393080:intron 45.0%
GACCCCAAAAATGCTATAGC+GGG + chr3_2:6990073-6990092 Msa0393080:intron 45.0%
ACAGATCCCAAATTGCTGAG+AGG - chr3_2:6990303-6990322 None:intergenic 45.0%
GCTCAAAGACATAAGTGGAC+CGG - chr3_2:6990426-6990445 None:intergenic 45.0%
GGAAACAGAGAGCAGAATAG+AGG + chr3_2:6990532-6990551 Msa0393080:intron 45.0%
CAGATGCGTACAGATCTGAA+AGG + chr3_2:6990642-6990661 Msa0393080:intron 45.0%
GCGCCGTAAAGAATGAAAGA+AGG + chr3_2:6990664-6990683 Msa0393080:intron 45.0%
AAAACCGCTATGCAGTGTTG+CGG + chr3_2:6990810-6990829 Msa0393080:intron 45.0%
TATCTCATAACGCTACGCCA+TGG + chr3_2:6990848-6990867 Msa0393080:intron 45.0%
AGTTAATAGCGGCGCTATAG+CGG - chr3_2:6990924-6990943 None:intergenic 45.0%
CTAACCAACATGTCCTGACA+TGG + chr3_2:6991060-6991079 Msa0393080:intron 45.0%
CTTCTATTAGTTGCATCCGC+TGG + chr3_2:6991293-6991312 Msa0393080:CDS 45.0%
CCCAACTTCTCGTAGACTTT+AGG - chr3_2:6991338-6991357 None:intergenic 45.0%
! TCTGCTCGTTTTCTTCCAGA+TGG - chr3_2:6991407-6991426 None:intergenic 45.0%
!! AGAATTACTGGCTCAAGCTG+AGG + chr3_2:6991424-6991443 Msa0393080:CDS 45.0%
! AGAGAAGGACATGGTGTTGA+AGG + chr3_2:6991482-6991501 Msa0393080:CDS 45.0%
GTTGCCTGAGATTCAGAGTA+TGG + chr3_2:6991638-6991657 Msa0393080:three_prime_UTR 45.0%
GCTACCATACTCTGAATCTC+AGG - chr3_2:6991645-6991664 None:intergenic 45.0%
!!! AATATTAATTTTTTTTTTGA+AGG + chr3_2:6987272-6987291 Msa0393080:intron 5.0%
TTGCCGGATCTGGCATCAAA+AGG - chr3_2:6983046-6983065 None:intergenic 50.0%
AAATCTCGTCGCGTAGTTGC+CGG - chr3_2:6983062-6983081 None:intergenic 50.0%
GTCTTACCACAGAGGAGTAG+AGG - chr3_2:6983165-6983184 None:intergenic 50.0%
! CACAGATGGTCTTACCACAG+AGG - chr3_2:6983173-6983192 None:intergenic 50.0%
CGAATAGAGGGAGTCACAGA+TGG - chr3_2:6983187-6983206 None:intergenic 50.0%
CAACCGCACATGAGGAAAGA+AGG - chr3_2:6983733-6983752 None:intergenic 50.0%
GGCTGGAAGAAGAAGAAGAC+AGG - chr3_2:6983784-6983803 None:intergenic 50.0%
! GCTTTTGACCGCATCAAGAC+CGG + chr3_2:6984008-6984027 Msa0393080:intron 50.0%
!!! CGCCCGAGATAGCGTTTTTT+TGG - chr3_2:6984112-6984131 None:intergenic 50.0%
GGGTGTGTGATTCGTGAAGA+AGG - chr3_2:6984612-6984631 None:intergenic 50.0%
! GTGCGGCATTTTAAGCCAAG+AGG + chr3_2:6985336-6985355 Msa0393080:five_prime_UTR 50.0%
AGCCAAGAGGGCCAAAGAAT+TGG + chr3_2:6985349-6985368 Msa0393080:five_prime_UTR 50.0%
ACACTTTCAGGGTGCATTGC+AGG - chr3_2:6985570-6985589 None:intergenic 50.0%
CTTCCCACCAGGTAAGCAAA+AGG - chr3_2:6985910-6985929 None:intergenic 50.0%
!! CAGTCTCAGAAGTGCTTAGC+AGG - chr3_2:6986067-6986086 None:intergenic 50.0%
TACGGCTTCCTTTCTCCAGA+AGG + chr3_2:6986475-6986494 Msa0393080:five_prime_UTR 50.0%
! CTGACGCGGTAGTCTGATTT+TGG - chr3_2:6986760-6986779 None:intergenic 50.0%
! CTTTTCACAAACGCGCGAAG+CGG - chr3_2:6986790-6986809 None:intergenic 50.0%
CTTCGCGCGTTTGTGAAAAG+CGG + chr3_2:6986790-6986809 Msa0393080:intron 50.0%
TTCGCGCGTTTGTGAAAAGC+GGG + chr3_2:6986791-6986810 Msa0393080:intron 50.0%
! TCTCGTTTTGTGCTCCGATC+CGG - chr3_2:6986878-6986897 None:intergenic 50.0%
GATCGGAGCACAAAACGAGA+GGG + chr3_2:6986878-6986897 Msa0393080:intron 50.0%
TTGCAGGAGAGAGACAACGA+AGG + chr3_2:6986963-6986982 Msa0393080:intron 50.0%
CACACGTGTTAGCATGTGAG+TGG + chr3_2:6987181-6987200 Msa0393080:intron 50.0%
CGTGTTAGCATGTGAGTGGT+TGG + chr3_2:6987185-6987204 Msa0393080:intron 50.0%
GGAGTAGAGTAGTGGCAAGT+GGG - chr3_2:6987217-6987236 None:intergenic 50.0%
!!! AACTCGTTTTGGGAGGTCAG+AGG - chr3_2:6988139-6988158 None:intergenic 50.0%
! CTCTCGGGTCAACTCGTTTT+GGG - chr3_2:6988149-6988168 None:intergenic 50.0%
ACATCCTCGGATGCCTTGTA+TGG + chr3_2:6988185-6988204 Msa0393080:intron 50.0%
! AAGTCCATACAAGGCATCCG+AGG - chr3_2:6988192-6988211 None:intergenic 50.0%
TCGGATGCCTTGTATGGACT+TGG + chr3_2:6988191-6988210 Msa0393080:intron 50.0%
! AGGGATAGACATCTAGAGCG+TGG - chr3_2:6988298-6988317 None:intergenic 50.0%
! CGCTCTAGATGTCTATCCCT+TGG + chr3_2:6988298-6988317 Msa0393080:intron 50.0%
TCTATCCCTTGGCGTGAGAA+TGG + chr3_2:6988309-6988328 Msa0393080:intron 50.0%
CTATCCCTTGGCGTGAGAAT+GGG + chr3_2:6988310-6988329 Msa0393080:intron 50.0%
TATCCCTTGGCGTGAGAATG+GGG + chr3_2:6988311-6988330 Msa0393080:intron 50.0%
GTGCTAATAGTCCCCACGTT+GGG + chr3_2:6988333-6988352 Msa0393080:intron 50.0%
TCCCCACGTTGGGTGAAATA+TGG + chr3_2:6988343-6988362 Msa0393080:intron 50.0%
GCCATATTTCACCCAACGTG+GGG - chr3_2:6988347-6988366 None:intergenic 50.0%
GGCCATATTTCACCCAACGT+GGG - chr3_2:6988348-6988367 None:intergenic 50.0%
AGGCCATATTTCACCCAACG+TGG - chr3_2:6988349-6988368 None:intergenic 50.0%
CCGTACAAAACCGGGTTGTA+CGG - chr3_2:6988408-6988427 None:intergenic 50.0%
!! CCGTACAACCCGGTTTTGTA+CGG + chr3_2:6988405-6988424 Msa0393080:intron 50.0%
TAGCTCAGCCGTACAAAACC+GGG - chr3_2:6988416-6988435 None:intergenic 50.0%
CTAGCTCAGCCGTACAAAAC+CGG - chr3_2:6988417-6988436 None:intergenic 50.0%
GGCTAGCAGGGAGATCATAA+AGG - chr3_2:6988968-6988987 None:intergenic 50.0%
!! TAAAGATCGGTGGGCTAGCA+GGG - chr3_2:6988980-6988999 None:intergenic 50.0%
!! ATAAAGATCGGTGGGCTAGC+AGG - chr3_2:6988981-6989000 None:intergenic 50.0%
AACAACTTCGGCTAGCAAGG+AGG - chr3_2:6989006-6989025 None:intergenic 50.0%
CAGCCTCGACAGTAAAGTCA+CGG + chr3_2:6989036-6989055 Msa0393080:intron 50.0%
GTGTTGCCAAATATCGGCCA+TGG + chr3_2:6989175-6989194 Msa0393080:intron 50.0%
!! GAGAGGGCATTACACATGCT+TGG - chr3_2:6989500-6989519 None:intergenic 50.0%
GAAATAGCGGTCATAGCGCT+AGG - chr3_2:6990105-6990124 None:intergenic 50.0%
AACACAGTCATGGCAGCTTC+CGG - chr3_2:6990489-6990508 None:intergenic 50.0%
! ATGAGATAGCGGCGCAATAG+CGG - chr3_2:6990836-6990855 None:intergenic 50.0%
GGCGTAGCGTTATGAGATAG+CGG - chr3_2:6990847-6990866 None:intergenic 50.0%
CGCCATGGCTTATTGCATAG+CGG + chr3_2:6990863-6990882 Msa0393080:intron 50.0%
GACCGCTATGCAATAAGCCA+TGG - chr3_2:6990868-6990887 None:intergenic 50.0%
GTAGCCATGTCAGGACATGT+TGG - chr3_2:6991067-6991086 None:intergenic 50.0%
! TAGACTTTAGGTGCCACACG+TGG - chr3_2:6991326-6991345 None:intergenic 50.0%
GTCTCCCAACACAATGTAGG+AGG - chr3_2:6991592-6991611 None:intergenic 50.0%
GCAGTCTCCCAACACAATGT+AGG - chr3_2:6991595-6991614 None:intergenic 50.0%
CCACAGAGGAGTAGAGGAGA+AGG - chr3_2:6983159-6983178 None:intergenic 55.0%
CCTTCTCCTCTACTCCTCTG+TGG + chr3_2:6983156-6983175 Msa0393080:intron 55.0%
GGCCACCCCAAAAATTGACG+CGG + chr3_2:6983338-6983357 Msa0393080:intron 55.0%
!! GCGGGCGATATTTGATGACG+CGG + chr3_2:6983380-6983399 Msa0393080:intron 55.0%
! AGTATTGGGCCTTAGCCCCT+AGG + chr3_2:6983661-6983680 Msa0393080:intron 55.0%
GTATTGGGCCTTAGCCCCTA+GGG + chr3_2:6983662-6983681 Msa0393080:intron 55.0%
!! GTGGTGGTAGCGGTCAATTG+CGG - chr3_2:6984054-6984073 None:intergenic 55.0%
AGCGTGTCTAGTGGTGGTAG+CGG - chr3_2:6984064-6984083 None:intergenic 55.0%
TACCACCACTAGACACGCTC+CGG + chr3_2:6984065-6984084 Msa0393080:intron 55.0%
AGGAAAAAGGGTCAGGAGCG+AGG + chr3_2:6985810-6985829 Msa0393080:five_prime_UTR 55.0%
GGAAAAAGGGTCAGGAGCGA+GGG + chr3_2:6985811-6985830 Msa0393080:five_prime_UTR 55.0%
TGTGCTCCGATCCGGAATAG+CGG - chr3_2:6986870-6986889 None:intergenic 55.0%
GGATCGGAGCACAAAACGAG+AGG + chr3_2:6986877-6986896 Msa0393080:intron 55.0%
GGGAGTAGAGTAGTGGCAAG+TGG - chr3_2:6987218-6987237 None:intergenic 55.0%
! TACCGCGCCGCGTCAATTTT+TGG + chr3_2:6987862-6987881 Msa0393080:intron 55.0%
! ACCGCGCCGCGTCAATTTTT+GGG + chr3_2:6987863-6987882 Msa0393080:intron 55.0%
GGCCACCCCAAAAATTGACG+CGG - chr3_2:6983338-6983357 None:intergenic 55.0%
! GGAGGTCAGAGGTGTAAACG+CGG - chr3_2:6988128-6988147 None:intergenic 55.0%
!! TCGGGTCAACTCGTTTTGGG+AGG - chr3_2:6988146-6988165 None:intergenic 55.0%
! GCTCTCGGGTCAACTCGTTT+TGG - chr3_2:6988150-6988169 None:intergenic 55.0%
GGTGCTAATAGTCCCCACGT+TGG + chr3_2:6988332-6988351 Msa0393080:intron 55.0%
!! CGGTTTTGTACGGCTGAGCT+AGG + chr3_2:6988415-6988434 Msa0393080:intron 55.0%
GCACCGTGACTTTACTGTCG+AGG - chr3_2:6989042-6989061 None:intergenic 55.0%
ACTGGAAGGATCCCAGCTTC+TGG - chr3_2:6990371-6990390 None:intergenic 55.0%
GGCTTATTGCATAGCGGTCC+TGG + chr3_2:6990869-6990888 Msa0393080:intron 55.0%
CACACGTGGATCATAGCCAG+CGG - chr3_2:6991312-6991331 None:intergenic 55.0%
! ACTGGCTCAAGCTGAGGTGA+TGG + chr3_2:6991430-6991449 Msa0393080:CDS 55.0%
!! CGCCGCGTCAATTTTTGGGG+TGG - chr3_2:6987867-6987886 None:intergenic 60.0%
! CCGCGCCGCGTCAATTTTTG+GGG - chr3_2:6987864-6987883 None:intergenic 60.0%
CCCCAAAAATTGACGCGGCG+CGG + chr3_2:6983343-6983362 Msa0393080:intron 60.0%
! CCCGCGCCGCGTCAATTTTT+GGG - chr3_2:6983347-6983366 None:intergenic 60.0%
CCCAAAAATTGACGCGGCGC+GGG + chr3_2:6983344-6983363 Msa0393080:intron 60.0%
! TCCCGCGCCGCGTCAATTTT+TGG - chr3_2:6983348-6983367 None:intergenic 60.0%
TATCTGGGCCCTAGGGGCTA+AGG - chr3_2:6983673-6983692 None:intergenic 60.0%
AGAAGCGGCAACCGCACATG+AGG - chr3_2:6983741-6983760 None:intergenic 60.0%
! ACCTCCGCGTTGATCTGTGC+CGG - chr3_2:6984087-6984106 None:intergenic 60.0%
TGTGGCCAGACACAGTGCTG+AGG + chr3_2:6986359-6986378 Msa0393080:five_prime_UTR 60.0%
! GTGGCCAGACACAGTGCTGA+GGG + chr3_2:6986360-6986379 Msa0393080:five_prime_UTR 60.0%
! TGGCCAGACACAGTGCTGAG+GGG + chr3_2:6986361-6986380 Msa0393080:five_prime_UTR 60.0%
CATCCCCTCAGCACTGTGTC+TGG - chr3_2:6986367-6986386 None:intergenic 60.0%
TTCACAAACGCGCGAAGCGG+TGG - chr3_2:6986787-6986806 None:intergenic 60.0%
!!! GTTTCGCGGCCGCTTTTACG+TGG + chr3_2:6986813-6986832 Msa0393080:intron 60.0%
CGCTCCGCTCCACGTAAAAG+CGG - chr3_2:6986825-6986844 None:intergenic 60.0%
! CGCTTTTACGTGGAGCGGAG+CGG + chr3_2:6986823-6986842 Msa0393080:intron 60.0%
! GCTTTTACGTGGAGCGGAGC+GGG + chr3_2:6986824-6986843 Msa0393080:intron 60.0%
!! GGGTCGATAGCGGGTCAAAG+CGG + chr3_2:6986844-6986863 Msa0393080:intron 60.0%
GGTCAAAGCGGCCGCTATTC+CGG + chr3_2:6986856-6986875 Msa0393080:intron 60.0%
AAGCGGCCGCTATTCCGGAT+CGG + chr3_2:6986861-6986880 Msa0393080:intron 60.0%
GCGGGGGCTATTACATGACG+CGG - chr3_2:6987830-6987849 None:intergenic 60.0%
AATTGACGCGGCGCGGTATG+CGG - chr3_2:6987860-6987879 None:intergenic 60.0%
CCCCAAAAATTGACGCGGCG+CGG - chr3_2:6983343-6983362 None:intergenic 60.0%
! CCGCGCCGCGTCAATTTTTG+GGG + chr3_2:6987864-6987883 Msa0393080:intron 60.0%
!! CGCCGCGTCAATTTTTGGGG+TGG + chr3_2:6987867-6987886 Msa0393080:intron 60.0%
GCACCCCATTCTCACGCCAA+GGG - chr3_2:6988317-6988336 None:intergenic 60.0%
AGCACCCCATTCTCACGCCA+AGG - chr3_2:6988318-6988337 None:intergenic 60.0%
GTCATGGCAGCTTCCGGTTC+TGG - chr3_2:6990483-6990502 None:intergenic 60.0%
GGCGCTATAGCGGCCAATAG+CGG - chr3_2:6990914-6990933 None:intergenic 60.0%
! CGCTGGCTATGATCCACGTG+TGG + chr3_2:6991310-6991329 Msa0393080:CDS 60.0%
CGTCGCGTAGTTGCCGGATC+TGG - chr3_2:6983056-6983075 None:intergenic 65.0%
AATTGACGCGGCGCGGGATG+CGG + chr3_2:6983350-6983369 Msa0393080:intron 65.0%
GATGCGGGCCGGTCTTGATG+CGG - chr3_2:6984019-6984038 None:intergenic 65.0%
! CGCTTTTCGTCGATGCGGGC+CGG - chr3_2:6984030-6984049 None:intergenic 65.0%
! CGGCCCGCATCGACGAAAAG+CGG + chr3_2:6984028-6984047 Msa0393080:intron 65.0%
!!! CGGCCGCTTTTCGTCGATGC+GGG - chr3_2:6984034-6984053 None:intergenic 65.0%
!!! GCGGCCGCTTTTCGTCGATG+CGG - chr3_2:6984035-6984054 None:intergenic 65.0%
TGCCGGAGCGTGTCTAGTGG+TGG - chr3_2:6984070-6984089 None:intergenic 65.0%
CTGTGCCGGAGCGTGTCTAG+TGG - chr3_2:6984073-6984092 None:intergenic 65.0%
CGCTCCGGCACAGATCAACG+CGG + chr3_2:6984080-6984099 Msa0393080:intron 65.0%
TCCGGCACAGATCAACGCGG+AGG + chr3_2:6984083-6984102 Msa0393080:intron 65.0%
ACGCTATCTCGGGCGCGAAG+CGG + chr3_2:6984117-6984136 Msa0393080:intron 65.0%
CACGGGTGACGCACACACGT+GGG - chr3_2:6984632-6984651 None:intergenic 65.0%
TCACGGGTGACGCACACACG+TGG - chr3_2:6984633-6984652 None:intergenic 65.0%
TTGTCAAACGCGGCCGCTCC+CGG + chr3_2:6986713-6986732 Msa0393080:intron 65.0%
GAAGCGGTGGCGTTCTGACG+CGG - chr3_2:6986774-6986793 None:intergenic 65.0%
!!! GCGGCCGCTTTTACGTGGAG+CGG + chr3_2:6986818-6986837 Msa0393080:intron 65.0%
ATTGACGCGGCGCGGTATGC+GGG - chr3_2:6987859-6987878 None:intergenic 65.0%
GTCAAAGCGGAAACGCGGCG+CGG - chr3_2:6987898-6987917 None:intergenic 65.0%
! TAGCGGATAGCGGCGCGTAG+CGG + chr3_2:6990048-6990067 Msa0393080:intron 65.0%
GCGGCCGCAACACTGCATAG+CGG - chr3_2:6990817-6990836 None:intergenic 65.0%
ATTGACGCGGCGCGGGATGC+GGG + chr3_2:6983351-6983370 Msa0393080:intron 70.0%
CGCTATCTCGGGCGCGAAGC+GGG + chr3_2:6984118-6984137 Msa0393080:intron 70.0%
TATCTCGGGCGCGAAGCGGG+CGG + chr3_2:6984121-6984140 Msa0393080:intron 70.0%
GGAGCGGAGCGGGTCGATAG+CGG + chr3_2:6986834-6986853 Msa0393080:intron 70.0%
GAGCGGAGCGGGTCGATAGC+GGG + chr3_2:6986835-6986854 Msa0393080:intron 70.0%
CGCGGGATGCGGGAGCGAAG+CGG + chr3_2:6983361-6983380 Msa0393080:intron 75.0%
GCGGGATGCGGGAGCGAAGC+GGG + chr3_2:6983362-6983381 Msa0393080:intron 75.0%
CCAATAGCGGCCGCGCGGTG+CGG - chr3_2:6990901-6990920 None:intergenic 75.0%
AGCGGCCAATAGCGGCCGCG+CGG - chr3_2:6990906-6990925 None:intergenic 75.0%
! GGCCGCTCCCGGCGCTATCG+CGG + chr3_2:6986724-6986743 Msa0393080:intron 80.0%
!! CGCCGCGATAGCGCCGGGAG+CGG - chr3_2:6986729-6986748 None:intergenic 80.0%
! CTCCCGGCGCTATCGCGGCG+CGG + chr3_2:6986729-6986748 Msa0393080:intron 80.0%
! CTCCGCGCCGCGATAGCGCC+GGG - chr3_2:6986734-6986753 None:intergenic 80.0%
! GCTCCGCGCCGCGATAGCGC+CGG - chr3_2:6986735-6986754 None:intergenic 80.0%
! GGCGCTATCGCGGCGCGGAG+CGG + chr3_2:6986734-6986753 Msa0393080:intron 80.0%
! GGTATGCGGGCGCGACGCGG+GGG - chr3_2:6987846-6987865 None:intergenic 80.0%
! CGGTATGCGGGCGCGACGCG+GGG - chr3_2:6987847-6987866 None:intergenic 80.0%
! GCGGTATGCGGGCGCGACGC+GGG - chr3_2:6987848-6987867 None:intergenic 80.0%
! CGCGGTATGCGGGCGCGACG+CGG - chr3_2:6987849-6987868 None:intergenic 80.0%
! AGCGGAAACGCGGCGCGGCG+CGG - chr3_2:6987893-6987912 None:intergenic 80.0%
! CTGGACCGCACCGCACCGCG+CGG + chr3_2:6990888-6990907 Msa0393080:intron 80.0%
! CCGCACCGCGCGGCCGCTAT+TGG + chr3_2:6990898-6990917 Msa0393080:intron 80.0%
! CGCGCGGTGCGGTGCGGTCC+AGG - chr3_2:6990890-6990909 None:intergenic 85.0%
! AGCGGCCGCGCGGTGCGGTG+CGG - chr3_2:6990896-6990915 None:intergenic 85.0%
! CGGGCGCGAAGCGGGCGGCG+CGG + chr3_2:6984126-6984145 Msa0393080:intron 90.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 6982946 6991891 6982946 ID=Msa0393080;Name=Msa0393080
chr3_2 mRNA 6982946 6991891 6982946 ID=Msa0393080-mRNA-1;Parent=Msa0393080;Name=Msa0393080-mRNA-1;_AED=0.18;_eAED=0.18;_QI=1961|0.75|0.8|1|0.25|0.4|5|377|82
chr3_2 exon 6982946 6983135 6982946 ID=Msa0393080-mRNA-1:exon:1738;Parent=Msa0393080-mRNA-1
chr3_2 exon 6984353 6984838 6984353 ID=Msa0393080-mRNA-1:exon:1739;Parent=Msa0393080-mRNA-1
chr3_2 exon 6984866 6986001 6984866 ID=Msa0393080-mRNA-1:exon:1740;Parent=Msa0393080-mRNA-1
chr3_2 exon 6986348 6986496 6986348 ID=Msa0393080-mRNA-1:exon:1741;Parent=Msa0393080-mRNA-1
chr3_2 exon 6991266 6991891 6991266 ID=Msa0393080-mRNA-1:exon:1742;Parent=Msa0393080-mRNA-1
chr3_2 five_prime_UTR 6982946 6983135 6982946 ID=Msa0393080-mRNA-1:five_prime_utr;Parent=Msa0393080-mRNA-1
chr3_2 five_prime_UTR 6984353 6984838 6984353 ID=Msa0393080-mRNA-1:five_prime_utr;Parent=Msa0393080-mRNA-1
chr3_2 five_prime_UTR 6984866 6986001 6984866 ID=Msa0393080-mRNA-1:five_prime_utr;Parent=Msa0393080-mRNA-1
chr3_2 five_prime_UTR 6986348 6986496 6986348 ID=Msa0393080-mRNA-1:five_prime_utr;Parent=Msa0393080-mRNA-1
chr3_2 CDS 6991266 6991514 6991266 ID=Msa0393080-mRNA-1:cds;Parent=Msa0393080-mRNA-1
chr3_2 three_prime_UTR 6991515 6991891 6991515 ID=Msa0393080-mRNA-1:three_prime_utr;Parent=Msa0393080-mRNA-1
Gene Sequence

>Msa0393080

ATGGAAATTGAAGCTGATTACATTGGTCTTCTATTAGTTGCATCCGCTGGCTATGATCCACGTGTGGCACCTAAAGTCTACGAGAAGTTGGGAAAAATATCCGGCGATTCTAAGCTTTTAGATTATTTTGCCACTCATCCATCTGGAAGAAAACGAGCAGAATTACTGGCTCAAGCTGAGGTGATGGATGAAGCTCTTACTATATATAAGAATGTAAGAGAAGGACATGGTGTTGAAGGATTTCTTTAG
Protein sequence

>Msa0393080

MEIEADYIGLLLVASAGYDPRVAPKVYEKLGKISGDSKLLDYFATHPSGRKRAELLAQAEVMDEALTIYKNVREGHGVEGFL*