Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0157310 | KEH35146.1 | 89.831 | 59 | 6 | 0 | 71 | 129 | 9 | 67 | 3.20e-28 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0157310 | A0A072V0B1 | 89.831 | 59 | 6 | 0 | 71 | 129 | 9 | 67 | 1.53e-28 | 110 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011170 | Msa0157310 | 0.814120 | 1.811184e-51 | -8.615850e-47 |
| Msa0012060 | Msa0157310 | 0.820027 | 8.520363e-53 | -8.615850e-47 |
| Msa0017510 | Msa0157310 | 0.816706 | 4.815487e-52 | -8.615850e-47 |
| Msa0039330 | Msa0157310 | 0.803425 | 3.507305e-49 | -8.615850e-47 |
| Msa0043980 | Msa0157310 | 0.827229 | 1.755739e-54 | -8.615850e-47 |
| Msa0044260 | Msa0157310 | 0.821214 | 4.548240e-53 | -8.615850e-47 |
| Msa0068680 | Msa0157310 | 0.842905 | 1.942902e-58 | -8.615850e-47 |
| Msa0074200 | Msa0157310 | 0.803457 | 3.454599e-49 | -8.615850e-47 |
| Msa0077610 | Msa0157310 | 0.984182 | 8.010987e-160 | -8.615850e-47 |
| Msa0077670 | Msa0157310 | 0.951265 | 2.937781e-109 | -8.615850e-47 |
| Msa0112750 | Msa0157310 | 0.805458 | 1.322305e-49 | -8.615850e-47 |
| Msa0114060 | Msa0157310 | 0.815352 | 9.659458e-52 | -8.615850e-47 |
| Msa0122590 | Msa0157310 | 0.821922 | 3.120394e-53 | -8.615850e-47 |
| Msa0123300 | Msa0157310 | 0.801910 | 7.204137e-49 | -8.615850e-47 |
| Msa0135820 | Msa0157310 | 0.811288 | 7.546000e-51 | -8.615850e-47 |
| Msa0157290 | Msa0157310 | 0.816165 | 6.363572e-52 | -8.615850e-47 |
| Msa0157310 | Msa0159770 | 0.812046 | 5.162024e-51 | -8.615850e-47 |
| Msa0157310 | Msa0159930 | 0.807883 | 4.065420e-50 | -8.615850e-47 |
| Msa0157310 | Msa0166870 | 0.830599 | 2.681679e-55 | -8.615850e-47 |
| Msa0157310 | Msa0173990 | 0.800335 | 1.512327e-48 | -8.615850e-47 |
| Msa0157310 | Msa0178930 | 0.827428 | 1.573344e-54 | -8.615850e-47 |
| Msa0157310 | Msa0184960 | 0.818733 | 1.680562e-52 | -8.615850e-47 |
| Msa0157310 | Msa0188830 | 0.840355 | 9.140619e-58 | -8.615850e-47 |
| Msa0157310 | Msa0197660 | 0.810590 | 1.068953e-50 | -8.615850e-47 |
| Msa0157310 | Msa0212990 | 0.801866 | 7.355909e-49 | -8.615850e-47 |
| Msa0157310 | Msa0217680 | 0.806993 | 6.279121e-50 | -8.615850e-47 |
| Msa0157310 | Msa0220580 | 0.837403 | 5.306753e-57 | -8.615850e-47 |
| Msa0157310 | Msa0222620 | 0.802947 | 4.405685e-49 | -8.615850e-47 |
| Msa0157310 | Msa0222890 | 0.817429 | 3.313842e-52 | -8.615850e-47 |
| Msa0157310 | Msa0223010 | 0.802615 | 5.158557e-49 | -8.615850e-47 |
| Msa0157310 | Msa0233300 | 0.803004 | 4.287688e-49 | -8.615850e-47 |
| Msa0157310 | Msa0233810 | 0.868122 | 8.253297e-66 | -8.615850e-47 |
| Msa0157310 | Msa0239800 | 0.809360 | 1.966577e-50 | -8.615850e-47 |
| Msa0157310 | Msa0242430 | 0.804336 | 2.268722e-49 | -8.615850e-47 |
| Msa0157310 | Msa0243100 | 0.803028 | 4.237584e-49 | -8.615850e-47 |
| Msa0157310 | Msa0243710 | 0.813914 | 2.010915e-51 | -8.615850e-47 |
| Msa0157310 | Msa0260680 | 0.800016 | 1.756371e-48 | -8.615850e-47 |
| Msa0157310 | Msa0265380 | 0.809502 | 1.833156e-50 | -8.615850e-47 |
| Msa0157310 | Msa0270100 | 0.831844 | 1.326024e-55 | -8.615850e-47 |
| Msa0157310 | Msa0282250 | 0.800639 | 1.311280e-48 | -8.615850e-47 |
| Msa0157310 | Msa0285450 | 0.821409 | 4.100253e-53 | -8.615850e-47 |
| Msa0157310 | Msa0287410 | 0.802078 | 6.654301e-49 | -8.615850e-47 |
| Msa0157310 | Msa0287650 | 0.808842 | 2.539408e-50 | -8.615850e-47 |
| Msa0157310 | Msa0288100 | 0.834723 | 2.541734e-56 | -8.615850e-47 |
| Msa0157310 | Msa0309770 | 0.811024 | 8.611199e-51 | -8.615850e-47 |
| Msa0157310 | Msa0317510 | 0.814047 | 1.879262e-51 | -8.615850e-47 |
| Msa0157310 | Msa0319170 | 0.810901 | 9.154317e-51 | -8.615850e-47 |
| Msa0157310 | Msa0326520 | 0.825185 | 5.379461e-54 | -8.615850e-47 |
| Msa0157310 | Msa0330340 | 0.802716 | 4.915999e-49 | -8.615850e-47 |
| Msa0157310 | Msa0339620 | 0.806978 | 6.325383e-50 | -8.615850e-47 |
| Msa0157310 | Msa0342360 | 0.817934 | 2.548483e-52 | -8.615850e-47 |
| Msa0157310 | Msa0359030 | 0.821184 | 4.619840e-53 | -8.615850e-47 |
| Msa0157310 | Msa0363910 | 0.886286 | 3.902834e-72 | -8.615850e-47 |
| Msa0157310 | Msa0379640 | 0.831894 | 1.288593e-55 | -8.615850e-47 |
| Msa0157310 | Msa0385840 | 0.809904 | 1.502351e-50 | -8.615850e-47 |
| Msa0157310 | Msa0389340 | 0.801466 | 8.884493e-49 | -8.615850e-47 |
| Msa0157310 | Msa0395790 | 0.803729 | 3.033689e-49 | -8.615850e-47 |
| Msa0157310 | Msa0395970 | 0.822274 | 2.586047e-53 | -8.615850e-47 |
| Msa0157310 | Msa0430420 | 0.800933 | 1.142140e-48 | -8.615850e-47 |
| Msa0157310 | Msa0431060 | 0.802828 | 4.660910e-49 | -8.615850e-47 |
| Msa0157310 | Msa0444750 | -0.808762 | 2.641524e-50 | -8.615850e-47 |
| Msa0157310 | Msa0453330 | 0.808948 | 2.409250e-50 | -8.615850e-47 |
| Msa0157310 | Msa0464100 | 0.802274 | 6.063606e-49 | -8.615850e-47 |
| Msa0157310 | Msa0464120 | 0.801190 | 1.012211e-48 | -8.615850e-47 |
| Msa0157310 | Msa0475550 | 0.801494 | 8.767973e-49 | -8.615850e-47 |
| Msa0157310 | Msa0477130 | -0.809745 | 1.625445e-50 | -8.615850e-47 |
| Msa0157310 | Msa0481530 | 0.804840 | 1.781074e-49 | -8.615850e-47 |
| Msa0157310 | Msa0484780 | 0.843953 | 1.020571e-58 | -8.615850e-47 |
| Msa0157310 | Msa0493630 | 0.801511 | 8.699731e-49 | -8.615850e-47 |
| Msa0157310 | Msa0495330 | 0.815016 | 1.147349e-51 | -8.615850e-47 |
| Msa0157310 | Msa0500360 | 0.801813 | 7.544000e-49 | -8.615850e-47 |
| Msa0157310 | Msa0512750 | 0.817462 | 3.256248e-52 | -8.615850e-47 |
| Msa0157310 | Msa0512900 | 0.831242 | 1.864778e-55 | -8.615850e-47 |
| Msa0157310 | Msa0515010 | 0.805007 | 1.643117e-49 | -8.615850e-47 |
| Msa0157310 | Msa0518380 | 0.807216 | 5.632565e-50 | -8.615850e-47 |
| Msa0157310 | Msa0529890 | 0.809175 | 2.154957e-50 | -8.615850e-47 |
| Msa0157310 | Msa0531180 | 0.805694 | 1.179875e-49 | -8.615850e-47 |
| Msa0157310 | Msa0532060 | 0.828277 | 9.832102e-55 | -8.615850e-47 |
| Msa0157310 | Msa0532170 | 0.831582 | 1.538686e-55 | -8.615850e-47 |
| Msa0157310 | Msa0536220 | 0.823217 | 1.560223e-53 | -8.615850e-47 |
| Msa0157310 | Msa0553460 | 0.805403 | 1.357807e-49 | -8.615850e-47 |
| Msa0157310 | Msa0555020 | 0.800250 | 1.574180e-48 | -8.615850e-47 |
| Msa0157310 | Msa0563840 | 0.811696 | 6.151820e-51 | -8.615850e-47 |
| Msa0157310 | Msa0567780 | 0.800499 | 1.400758e-48 | -8.615850e-47 |
| Msa0157310 | Msa0577500 | 0.822725 | 2.031327e-53 | -8.615850e-47 |
| Msa0157310 | Msa0585230 | 0.817060 | 4.010576e-52 | -8.615850e-47 |
| Msa0157310 | Msa0590840 | 0.816465 | 5.454433e-52 | -8.615850e-47 |
| Msa0157310 | Msa0606750 | 0.805861 | 1.087835e-49 | -8.615850e-47 |
| Msa0157310 | Msa0608160 | 0.830881 | 2.287709e-55 | -8.615850e-47 |
| Msa0157310 | Msa0610430 | 0.806310 | 8.754672e-50 | -8.615850e-47 |
| Msa0157310 | Msa0612930 | 0.801769 | 7.702332e-49 | -8.615850e-47 |
| Msa0157310 | Msa0613090 | 0.811660 | 6.266214e-51 | -8.615850e-47 |
| Msa0157310 | Msa0625720 | 0.808725 | 2.689438e-50 | -8.615850e-47 |
| Msa0157310 | Msa0631200 | 0.803618 | 3.199471e-49 | -8.615850e-47 |
| Msa0157310 | Msa0633060 | 0.825892 | 3.659247e-54 | -8.615850e-47 |
| Msa0157310 | Msa0648080 | 0.836660 | 8.215672e-57 | -8.615850e-47 |
| Msa0157310 | Msa0648880 | 0.800798 | 1.217072e-48 | -8.615850e-47 |
| Msa0157310 | Msa0657970 | 0.830941 | 2.211937e-55 | -8.615850e-47 |
| Msa0157310 | Msa0658570 | 0.801136 | 1.038363e-48 | -8.615850e-47 |
| Msa0157310 | Msa0663240 | 0.803173 | 3.954884e-49 | -8.615850e-47 |
| Msa0157310 | Msa0669440 | 0.816462 | 5.461549e-52 | -8.615850e-47 |
| Msa0157310 | Msa0672690 | 0.829128 | 6.120514e-55 | -8.615850e-47 |
| Msa0157310 | Msa0673460 | 0.810904 | 9.140308e-51 | -8.615850e-47 |
| Msa0157310 | Msa0676760 | 0.829096 | 6.231693e-55 | -8.615850e-47 |
| Msa0157310 | Msa0681270 | 0.801852 | 7.404258e-49 | -8.615850e-47 |
| Msa0157310 | Msa0688070 | 0.822477 | 2.319859e-53 | -8.615850e-47 |
| Msa0157310 | Msa0688480 | 0.805382 | 1.371177e-49 | -8.615850e-47 |
| Msa0157310 | Msa0691380 | 0.802847 | 4.619225e-49 | -8.615850e-47 |
| Msa0157310 | Msa0692230 | 0.808079 | 3.693045e-50 | -8.615850e-47 |
| Msa0157310 | Msa0693380 | 0.838335 | 3.056558e-57 | -8.615850e-47 |
| Msa0157310 | Msa0696640 | 0.811160 | 8.043008e-51 | -8.615850e-47 |
| Msa0157310 | Msa0701900 | 0.809801 | 1.581448e-50 | -8.615850e-47 |
| Msa0157310 | Msa0715470 | 0.804218 | 2.399997e-49 | -8.615850e-47 |
| Msa0157310 | Msa0736860 | 0.809395 | 1.932986e-50 | -8.615850e-47 |
| Msa0157310 | Msa0740510 | 0.801110 | 1.050751e-48 | -8.615850e-47 |
| Msa0157310 | Msa0744040 | 0.807851 | 4.129748e-50 | -8.615850e-47 |
| Msa0157310 | Msa0753720 | 0.824609 | 7.355694e-54 | -8.615850e-47 |
| Msa0157310 | Msa0778520 | 0.828585 | 8.284117e-55 | -8.615850e-47 |
| Msa0157310 | Msa0788710 | 0.804581 | 2.016432e-49 | -8.615850e-47 |
| Msa0157310 | Msa0790510 | 0.843322 | 1.504463e-58 | -8.615850e-47 |
| Msa0157310 | Msa0796700 | 0.800598 | 1.336938e-48 | -8.615850e-47 |
| Msa0157310 | Msa0816590 | 0.803955 | 2.722221e-49 | -8.615850e-47 |
| Msa0157310 | Msa0825340 | 0.801566 | 8.475499e-49 | -8.615850e-47 |
| Msa0157310 | Msa0857640 | 0.809781 | 1.597090e-50 | -8.615850e-47 |
| Msa0157310 | Msa0861130 | 0.800483 | 1.411288e-48 | -8.615850e-47 |
| Msa0157310 | Msa0869120 | 0.800159 | 1.642189e-48 | -8.615850e-47 |
| Msa0157310 | Msa0880140 | 0.819495 | 1.127214e-52 | -8.615850e-47 |
| Msa0157310 | Msa0892080 | 0.804198 | 2.423123e-49 | -8.615850e-47 |
| Msa0157310 | Msa0893950 | 0.808496 | 3.010668e-50 | -8.615850e-47 |
| Msa0157310 | Msa0922330 | 0.807402 | 5.144606e-50 | -8.615850e-47 |
| Msa0157310 | Msa0926470 | 0.809701 | 1.661304e-50 | -8.615850e-47 |
| Msa0157310 | Msa0930390 | 0.813166 | 2.937470e-51 | -8.615850e-47 |
| Msa0157310 | Msa0931520 | 0.806633 | 7.482105e-50 | -8.615850e-47 |
| Msa0157310 | Msa0935670 | 0.800197 | 1.613861e-48 | -8.615850e-47 |
| Msa0157310 | Msa0935910 | 0.804186 | 2.437119e-49 | -8.615850e-47 |
| Msa0157310 | Msa0942200 | 0.803951 | 2.728330e-49 | -8.615850e-47 |
| Msa0157310 | Msa0954550 | 0.811571 | 6.550215e-51 | -8.615850e-47 |
| Msa0157310 | Msa0969520 | 0.826681 | 2.374431e-54 | -8.615850e-47 |
| Msa0157310 | Msa0969600 | 0.800974 | 1.120225e-48 | -8.615850e-47 |
| Msa0157310 | Msa0975220 | 0.816561 | 5.190996e-52 | -8.615850e-47 |
| Msa0157310 | Msa1003620 | 0.807096 | 5.973563e-50 | -8.615850e-47 |
| Msa0157310 | Msa1014540 | 0.825017 | 5.893493e-54 | -8.615850e-47 |
| Msa0157310 | Msa1015790 | 0.812032 | 5.199452e-51 | -8.615850e-47 |
| Msa0157310 | Msa1018100 | 0.803355 | 3.627321e-49 | -8.615850e-47 |
| Msa0157310 | Msa1044420 | 0.839059 | 1.986876e-57 | -8.615850e-47 |
| Msa0157310 | Msa1074190 | 0.800332 | 1.514538e-48 | -8.615850e-47 |
| Msa0157310 | Msa1075540 | 0.817142 | 3.844264e-52 | -8.615850e-47 |
| Msa0157310 | Msa1082500 | 0.846995 | 1.530105e-59 | -8.615850e-47 |
| Msa0157310 | Msa1083840 | 0.810586 | 1.070594e-50 | -8.615850e-47 |
| Msa0157310 | Msa1085300 | 0.817772 | 2.772610e-52 | -8.615850e-47 |
| Msa0157310 | Msa1097800 | 0.820660 | 6.098179e-53 | -8.615850e-47 |
| Msa0157310 | Msa1098400 | 0.820012 | 8.587347e-53 | -8.615850e-47 |
| Msa0157310 | Msa1098420 | 0.815524 | 8.845325e-52 | -8.615850e-47 |
| Msa0157310 | Msa1119480 | 0.803446 | 3.472092e-49 | -8.615850e-47 |
| Msa0157310 | Msa1124050 | 0.815452 | 9.176171e-52 | -8.615850e-47 |
| Msa0157310 | Msa1131220 | 0.834575 | 2.768872e-56 | -8.615850e-47 |
| Msa0157310 | Msa1148130 | 0.816550 | 5.220036e-52 | -8.615850e-47 |
| Msa0157310 | Msa1151900 | 0.808953 | 2.403854e-50 | -8.615850e-47 |
| Msa0157310 | Msa1151910 | 0.801593 | 8.369949e-49 | -8.615850e-47 |
| Msa0157310 | Msa1154280 | 0.813944 | 1.980691e-51 | -8.615850e-47 |
| Msa0157310 | Msa1162550 | -0.813034 | 3.140118e-51 | -8.615850e-47 |
| Msa0157310 | Msa1169090 | 0.808918 | 2.446066e-50 | -8.615850e-47 |
| Msa0157310 | Msa1185980 | 0.802034 | 6.795438e-49 | -8.615850e-47 |
| Msa0157310 | Msa1201560 | 0.827660 | 1.383498e-54 | -8.615850e-47 |
| Msa0157310 | Msa1203250 | 0.825298 | 5.058298e-54 | -8.615850e-47 |
| Msa0157310 | Msa1214480 | 0.801228 | 9.943222e-49 | -8.615850e-47 |
| Msa0157310 | Msa1224340 | 0.810425 | 1.159904e-50 | -8.615850e-47 |
| Msa0157310 | Msa1224480 | 0.821236 | 4.493829e-53 | -8.615850e-47 |
| Msa0157310 | Msa1228590 | 0.803510 | 3.368466e-49 | -8.615850e-47 |
| Msa0157310 | Msa1233500 | 0.826179 | 3.127176e-54 | -8.615850e-47 |
| Msa0157310 | Msa1233890 | 0.813606 | 2.351088e-51 | -8.615850e-47 |
| Msa0157310 | Msa1238930 | 0.825730 | 3.996783e-54 | -8.615850e-47 |
| Msa0157310 | Msa1239720 | 0.805255 | 1.457954e-49 | -8.615850e-47 |
| Msa0157310 | Msa1267060 | 0.817561 | 3.093157e-52 | -8.615850e-47 |
| Msa0157310 | Msa1270610 | 0.801180 | 1.017027e-48 | -8.615850e-47 |
| Msa0157310 | Msa1276440 | 0.827039 | 1.949565e-54 | -8.615850e-47 |
| Msa0157310 | Msa1279210 | 0.802556 | 5.304049e-49 | -8.615850e-47 |
| Msa0157310 | Msa1283860 | 0.826327 | 2.882691e-54 | -8.615850e-47 |
| Msa0157310 | Msa1284680 | 0.806918 | 6.513114e-50 | -8.615850e-47 |
| Msa0157310 | Msa1288420 | 0.812888 | 3.380393e-51 | -8.615850e-47 |
| Msa0157310 | Msa1294480 | 0.816790 | 4.611218e-52 | -8.615850e-47 |
| Msa0157310 | Msa1296280 | 0.802350 | 5.849509e-49 | -8.615850e-47 |
| Msa0157310 | Msa1297290 | 0.817304 | 3.533986e-52 | -8.615850e-47 |
| Msa0157310 | Msa1305190 | 0.811727 | 6.058926e-51 | -8.615850e-47 |
| Msa0157310 | Msa1305340 | 0.838173 | 3.365007e-57 | -8.615850e-47 |
| Msa0157310 | Msa1306840 | 0.820367 | 7.120779e-53 | -8.615850e-47 |
| Msa0157310 | Msa1306850 | 0.804699 | 1.905573e-49 | -8.615850e-47 |
| Msa0157310 | Msa1314340 | 0.822950 | 1.800311e-53 | -8.615850e-47 |
| Msa0157310 | Msa1318990 | 0.804162 | 2.465866e-49 | -8.615850e-47 |
| Msa0157310 | Msa1320620 | 0.805372 | 1.377860e-49 | -8.615850e-47 |
| Msa0157310 | Msa1322890 | 0.815057 | 1.123215e-51 | -8.615850e-47 |
| Msa0157310 | Msa1327550 | 0.812383 | 4.357962e-51 | -8.615850e-47 |
| Msa0157310 | Msa1331000 | 0.819151 | 1.350228e-52 | -8.615850e-47 |
| Msa0157310 | Msa1331320 | 0.804963 | 1.678363e-49 | -8.615850e-47 |
| Msa0157310 | Msa1333410 | 0.802702 | 4.949914e-49 | -8.615850e-47 |
| Msa0157310 | Msa1340260 | 0.806833 | 6.788884e-50 | -8.615850e-47 |
| Msa0157310 | Msa1340270 | 0.808315 | 3.289112e-50 | -8.615850e-47 |
| Msa0157310 | Msa1340650 | 0.811052 | 8.487645e-51 | -8.615850e-47 |
| Msa0157310 | Msa1343760 | 0.808897 | 2.470524e-50 | -8.615850e-47 |
| Msa0157310 | Msa1348560 | 0.816548 | 5.225735e-52 | -8.615850e-47 |
| Msa0157310 | Msa1359040 | 0.813610 | 2.346138e-51 | -8.615850e-47 |
| Msa0157310 | Msa1384350 | 0.819086 | 1.396994e-52 | -8.615850e-47 |
| Msa0157310 | Msa1385000 | 0.818122 | 2.311343e-52 | -8.615850e-47 |
| Msa0157310 | Msa1392260 | 0.838318 | 3.087188e-57 | -8.615850e-47 |
| Msa0157310 | Msa1400870 | -0.800935 | 1.140991e-48 | -8.615850e-47 |
| Msa0157310 | Msa1401530 | 0.807634 | 4.592194e-50 | -8.615850e-47 |
| Msa0157310 | Msa1411020 | 0.809598 | 1.748406e-50 | -8.615850e-47 |
| Msa0157310 | Msa1424450 | 0.804727 | 1.880532e-49 | -8.615850e-47 |
| Msa0157310 | Msa1424750 | 0.807040 | 6.138103e-50 | -8.615850e-47 |
| Msa0157310 | Msa1426470 | 0.822705 | 2.053077e-53 | -8.615850e-47 |
| Msa0157310 | Msa1427230 | 0.820948 | 5.237714e-53 | -8.615850e-47 |
| Msa0157310 | Msa1429900 | 0.838750 | 2.388107e-57 | -8.615850e-47 |
| Msa0157310 | Msa1434350 | 0.803822 | 2.901800e-49 | -8.615850e-47 |
| Msa0157310 | Msa1439320 | 0.806675 | 7.332437e-50 | -8.615850e-47 |
| Msa0157310 | Msa1451620 | -0.801578 | 8.429888e-49 | -8.615850e-47 |
| Msa0157310 | Msa1460050 | 0.831677 | 1.457335e-55 | -8.615850e-47 |
| Msa0157310 | Msa1460830 | 0.825357 | 4.897830e-54 | -8.615850e-47 |
| Msa0157310 | Msa1463670 | 0.807984 | 3.870526e-50 | -8.615850e-47 |
| Msa0157310 | Msa1466540 | 0.802223 | 6.212506e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0157310 | MtrunA17_Chr6g0463371 | 76.316 | 38 | 8 | 1 | 99 | 136 | 1 | 37 | 4.19e-11 | 55.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 58 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACCTATTATTTCCGAAAA+TGG | 0.182555 | 1_4:-24441303 | Msa0157310:CDS |
| TTAATTAATACTCAGGAATT+AGG | 0.219728 | 1_4:-24438642 | Msa0157310:intron |
| TTCTTGGGATGATCCATTTC+CGG | 0.229145 | 1_4:-24443994 | Msa0157310:CDS |
| GAGTCTCGACAGCAACTTAA+TGG | 0.240881 | 1_4:+24444017 | None:intergenic |
| CTTTCCACCTCTTTATGTTT+AGG | 0.240922 | 1_4:+24438127 | None:intergenic |
| TAAAGAGGTGGAAAGGAATA+TGG | 0.244687 | 1_4:-24438119 | Msa0157310:three_prime_UTR |
| TTATAGGGTGGAGCCTTTAT+AGG | 0.274138 | 1_4:-24437906 | Msa0157310:three_prime_UTR |
| TTGACAATGGCTTGAAGTTC+CGG | 0.315301 | 1_4:+24442070 | None:intergenic |
| GAAGGTCATTGGAGAATATA+AGG | 0.330932 | 1_4:-24438186 | Msa0157310:three_prime_UTR |
| AAATTGTGCCAAAAGCTTCT+TGG | 0.335598 | 1_4:-24443536 | Msa0157310:CDS |
| GTGTAGTAGAACAATTAGTA+TGG | 0.338655 | 1_4:-24438086 | Msa0157310:three_prime_UTR |
| AATTGTGCCAAAAGCTTCTT+GGG | 0.341672 | 1_4:-24443535 | Msa0157310:CDS |
| TGCATTTCCCAAGAAGCTTT+TGG | 0.342440 | 1_4:+24443528 | None:intergenic |
| GAGAATGAAGGATGACATAA+AGG | 0.345215 | 1_4:-24441336 | Msa0157310:CDS |
| TGCTCGGAGGTCGCCGGAAA+TGG | 0.366381 | 1_4:+24443981 | None:intergenic |
| GTTGCTGTCGAGACTCTTCT+TGG | 0.370381 | 1_4:-24444010 | Msa0157310:CDS |
| ATAAACAAAACAGCCTATAA+AGG | 0.374122 | 1_4:+24437893 | None:intergenic |
| AGGATGGCGTTGGAGTGTTT+TGG | 0.393788 | 1_4:-24438622 | Msa0157310:CDS |
| ATTATTGAACCATCAAAATC+TGG | 0.406563 | 1_4:-24438151 | Msa0157310:three_prime_UTR |
| GAAACAAATGAGAAGGTCAT+TGG | 0.414854 | 1_4:-24438197 | Msa0157310:exon |
| ATGGAGCAGATCTTCCTGTT+TGG | 0.427177 | 1_4:-24441284 | Msa0157310:CDS |
| TCCGAGCATCCGTCGAGTAC+TGG | 0.429654 | 1_4:-24443966 | Msa0157310:CDS |
| GATATAGAGGTGGAAGGAAA+TGG | 0.452347 | 1_4:-24438033 | Msa0157310:three_prime_UTR |
| ACATGTTTCTGTTGCATCCA+TGG | 0.469525 | 1_4:-24442047 | Msa0157310:intron |
| TTTGGCAGTGATCTCCCTGC+TGG | 0.470036 | 1_4:-24438604 | Msa0157310:intron |
| TGGTGTACGGGTTACATCTC+CGG | 0.477444 | 1_4:-24442089 | Msa0157310:CDS |
| AAAGAGGTGGAAAGGAATAT+GGG | 0.480626 | 1_4:-24438118 | Msa0157310:three_prime_UTR |
| TATGATTACCTTGATTATGT+AGG | 0.491010 | 1_4:+24441252 | None:intergenic |
| GTAGGAGTTGATCTCCAAAC+AGG | 0.497937 | 1_4:+24441270 | None:intergenic |
| TTGCTGTCGAGACTCTTCTT+GGG | 0.505566 | 1_4:-24444009 | Msa0157310:CDS |
| TCCAGTACTCGACGGATGCT+CGG | 0.515552 | 1_4:+24443965 | None:intergenic |
| ATCTGGACCTAAACATAAAG+AGG | 0.520948 | 1_4:-24438134 | Msa0157310:three_prime_UTR |
| ATGACATAAAGGAGATAAGA+TGG | 0.525273 | 1_4:-24441325 | Msa0157310:CDS |
| CTCAGGAATTAGGATGGCGT+TGG | 0.530379 | 1_4:-24438632 | Msa0157310:intron |
| GACGGATGCTCGGAGGTCGC+CGG | 0.537445 | 1_4:+24443975 | None:intergenic |
| GATCAACTCCTACATAATCA+AGG | 0.538359 | 1_4:-24441260 | Msa0157310:intron |
| ATGCTTTCTATTGCCTAGGT+AGG | 0.540064 | 1_4:+24437812 | None:intergenic |
| TCAATGACAAAGCGATATAG+AGG | 0.545477 | 1_4:-24438046 | Msa0157310:three_prime_UTR |
| TCGGACAGAGAGGAGGAAGA+TGG | 0.550968 | 1_4:+24444071 | None:intergenic |
| GGAGCATAACACTGCAACAA+AGG | 0.557139 | 1_4:-24438005 | Msa0157310:three_prime_UTR |
| GGTCGTGTTGAAGAGAATGA+AGG | 0.558124 | 1_4:-24441348 | Msa0157310:CDS |
| TCATGTTGCAGGGATGTAGG+TGG | 0.572168 | 1_4:-24443562 | Msa0157310:intron |
| CTAAACATAAAGAGGTGGAA+AGG | 0.577902 | 1_4:-24438126 | Msa0157310:three_prime_UTR |
| TGTAGTAGAACAATTAGTAT+GGG | 0.580023 | 1_4:-24438085 | Msa0157310:three_prime_UTR |
| TGATATGCTTTCTATTGCCT+AGG | 0.591761 | 1_4:+24437808 | None:intergenic |
| TTAATACTCAGGAATTAGGA+TGG | 0.593289 | 1_4:-24438638 | Msa0157310:intron |
| ACATTAAATTAATCCTACCT+AGG | 0.599212 | 1_4:-24437825 | Msa0157310:three_prime_UTR |
| TTGTAGATCGGACAGAGAGG+AGG | 0.610463 | 1_4:+24444064 | None:intergenic |
| CAAAGCGATATAGAGGTGGA+AGG | 0.623526 | 1_4:-24438039 | Msa0157310:three_prime_UTR |
| AACAGAAACATGTTTGACAA+TGG | 0.625197 | 1_4:+24442057 | None:intergenic |
| AGTCGGATAGAATTGTAGAT+CGG | 0.627874 | 1_4:+24444052 | None:intergenic |
| AGGTGGAAGGAAATGGACAT+TGG | 0.628852 | 1_4:-24438026 | Msa0157310:three_prime_UTR |
| GAATTGTAGATCGGACAGAG+AGG | 0.640211 | 1_4:+24444061 | None:intergenic |
| TGGACCTAAACATAAAGAGG+TGG | 0.642850 | 1_4:-24438131 | Msa0157310:three_prime_UTR |
| ATCGGAGATCCAGTACTCGA+CGG | 0.647965 | 1_4:+24443957 | None:intergenic |
| ATGACAAAGCGATATAGAGG+TGG | 0.648420 | 1_4:-24438043 | Msa0157310:three_prime_UTR |
| GATGATGGTACTGACCAGCA+GGG | 0.714852 | 1_4:+24438590 | None:intergenic |
| AGTACTCGACGGATGCTCGG+AGG | 0.722695 | 1_4:+24443968 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATAAAATCCAATATA+CGG | + | chr1_4:24437959-24437978 | None:intergenic | 10.0% |
| !! | GAATAAAATAAAAAGAAATA+AGG | + | chr1_4:24438206-24438225 | None:intergenic | 10.0% |
| !!! | CTGTATATTATATTTTTTTA+AGG | - | chr1_4:24438225-24438244 | Msa0157310:intron | 10.0% |
| !!! | ATTTGAAAATCTATTTTAAA+GGG | + | chr1_4:24439048-24439067 | None:intergenic | 10.0% |
| !!! | TTTTAGGAAATTTTTATATT+CGG | - | chr1_4:24439907-24439926 | Msa0157310:intron | 10.0% |
| !! | AAATATAATTTATAATAACG+AGG | + | chr1_4:24442371-24442390 | None:intergenic | 10.0% |
| !!! | GTTTAAGTTTAAATATAATT+AGG | - | chr1_4:24443398-24443417 | Msa0157310:intron | 10.0% |
| !!! | TTTTTATTTTTTTGCTTTAT+AGG | - | chr1_4:24443954-24443973 | Msa0157310:CDS | 10.0% |
| !!! | TTTTATTTTTTTGCTTTATA+GGG | - | chr1_4:24443955-24443974 | Msa0157310:CDS | 10.0% |
| !!! | TGTTTTTTTGTTATGAAATT+AGG | - | chr1_4:24438104-24438123 | Msa0157310:three_prime_UTR | 15.0% |
| !!! | CACATTTTTTATGTTAAAAA+AGG | + | chr1_4:24438527-24438546 | None:intergenic | 15.0% |
| !!! | GATTTGAAAATCTATTTTAA+AGG | + | chr1_4:24439049-24439068 | None:intergenic | 15.0% |
| !! | TTAGAAGAAAAAAAATAAAG+AGG | + | chr1_4:24439475-24439494 | None:intergenic | 15.0% |
| !! | TAAAAAAAACACAACAATTT+GGG | + | chr1_4:24439892-24439911 | None:intergenic | 15.0% |
| !! | CAGTTTATAACTAATTTATT+CGG | + | chr1_4:24440009-24440028 | None:intergenic | 15.0% |
| !! | AGTTCAAAATTTATTTGAAA+GGG | + | chr1_4:24440851-24440870 | None:intergenic | 15.0% |
| !! | AAGTTCAAAATTTATTTGAA+AGG | + | chr1_4:24440852-24440871 | None:intergenic | 15.0% |
| !!! | ACACTATCAAATTTAAAATA+GGG | + | chr1_4:24441455-24441474 | None:intergenic | 15.0% |
| !!! | AACACTATCAAATTTAAAAT+AGG | + | chr1_4:24441456-24441475 | None:intergenic | 15.0% |
| !!! | TATTTTAAATTTGATAGTGT+TGG | - | chr1_4:24441455-24441474 | Msa0157310:intron | 15.0% |
| !!! | AACTTATTTTGTCTAAAATA+TGG | - | chr1_4:24441488-24441507 | Msa0157310:intron | 15.0% |
| !! | TTAGTTAAAAAATATGATGT+AGG | - | chr1_4:24441630-24441649 | Msa0157310:intron | 15.0% |
| !! | TAGTTAAAAAATATGATGTA+GGG | - | chr1_4:24441631-24441650 | Msa0157310:intron | 15.0% |
| !!! | AATATTTTTAAAGAATGCAT+AGG | - | chr1_4:24442773-24442792 | Msa0157310:intron | 15.0% |
| !!! | ATATTTTTAAAGAATGCATA+GGG | - | chr1_4:24442774-24442793 | Msa0157310:intron | 15.0% |
| !!! | GAAACAGAATAATATTTTAT+TGG | + | chr1_4:24442922-24442941 | None:intergenic | 15.0% |
| !! | TGAATATGAAAATAAAAGAA+TGG | - | chr1_4:24443117-24443136 | Msa0157310:intron | 15.0% |
| !! | TCATAAAAAAAACCGTATAT+TGG | - | chr1_4:24437944-24437963 | Msa0157310:three_prime_UTR | 20.0% |
| !!! | TTATTTTTTTTTCATGTTGC+AGG | - | chr1_4:24438303-24438322 | Msa0157310:intron | 20.0% |
| !!! | TATTTTTTTTTCATGTTGCA+GGG | - | chr1_4:24438304-24438323 | Msa0157310:intron | 20.0% |
| !!! | AAAAAAGGTTTTGATATTAC+AGG | - | chr1_4:24438494-24438513 | Msa0157310:intron | 20.0% |
| !!! | ATAAGTAGTTATTTCAAAAG+TGG | + | chr1_4:24438827-24438846 | None:intergenic | 20.0% |
| !!! | AATAACCAGTTTTCAAAAAA+AGG | - | chr1_4:24438883-24438902 | Msa0157310:intron | 20.0% |
| !!! | ATAACCAGTTTTCAAAAAAA+GGG | - | chr1_4:24438884-24438903 | Msa0157310:intron | 20.0% |
| !! | AATCTTCATAAAGAAAATCA+AGG | - | chr1_4:24438986-24439005 | Msa0157310:intron | 20.0% |
| !!! | AAACATAGCATTTAAAACAA+GGG | + | chr1_4:24439076-24439095 | None:intergenic | 20.0% |
| !!! | TAAACATAGCATTTAAAACA+AGG | + | chr1_4:24439077-24439096 | None:intergenic | 20.0% |
| !! | ATATGTTAAAATATAGTAGC+TGG | - | chr1_4:24439161-24439180 | Msa0157310:intron | 20.0% |
| !! | AAATGATGAATTATAGATCA+AGG | + | chr1_4:24439307-24439326 | None:intergenic | 20.0% |
| !! | AAAAGATTTAAAAACGCAAA+AGG | - | chr1_4:24439519-24439538 | Msa0157310:intron | 20.0% |
| !!! | AGTTTTCTTAAGTTATTCAT+AGG | + | chr1_4:24439663-24439682 | None:intergenic | 20.0% |
| !!! | TTTATTTTCATTTTCAGCTA+TGG | - | chr1_4:24439767-24439786 | Msa0157310:intron | 20.0% |
| !! | CTAAAAAAAACACAACAATT+TGG | + | chr1_4:24439893-24439912 | None:intergenic | 20.0% |
| !!! | CAAATTGTTGTGTTTTTTTT+AGG | - | chr1_4:24439891-24439910 | Msa0157310:intron | 20.0% |
| !! | TGTCTGTATCTATAAAATAA+TGG | - | chr1_4:24440095-24440114 | Msa0157310:intron | 20.0% |
| !! | GTCTGTATCTATAAAATAAT+GGG | - | chr1_4:24440096-24440115 | Msa0157310:intron | 20.0% |
| !!! | AAAATTTGAGTATTTTGCTT+TGG | + | chr1_4:24440435-24440454 | None:intergenic | 20.0% |
| !! | ACAATAACATTCAATAGAAT+TGG | + | chr1_4:24440682-24440701 | None:intergenic | 20.0% |
| !! | TATCATTATAAAGTATGCAA+CGG | + | chr1_4:24441146-24441165 | None:intergenic | 20.0% |
| !!! | CACTATCAAATTTAAAATAG+GGG | + | chr1_4:24441454-24441473 | None:intergenic | 20.0% |
| !!! | TTTTAGACAAAATAAGTTTG+TGG | + | chr1_4:24441486-24441505 | None:intergenic | 20.0% |
| !! | TATTTAACCAACCAATATTA+CGG | + | chr1_4:24441733-24441752 | None:intergenic | 20.0% |
| !! | ATATTAAAATGACATTTGTG+AGG | - | chr1_4:24441802-24441821 | Msa0157310:intron | 20.0% |
| !! | TAGAGAAGAATAAATCATTT+AGG | + | chr1_4:24442203-24442222 | None:intergenic | 20.0% |
| !! | AAAACAGTACTTACTAATTA+AGG | + | chr1_4:24442496-24442515 | None:intergenic | 20.0% |
| !!! | TATTTTTAAAGAATGCATAG+GGG | - | chr1_4:24442775-24442794 | Msa0157310:intron | 20.0% |
| !! | TATAAAAAGAAGACTTCATT+AGG | + | chr1_4:24442812-24442831 | None:intergenic | 20.0% |
| !!! | TCTTTTATTTTCATATTCAG+AGG | + | chr1_4:24443116-24443135 | None:intergenic | 20.0% |
| !! | AAATAAATTTCATCAAGATC+TGG | + | chr1_4:24443195-24443214 | None:intergenic | 20.0% |
| !! | TTAATTAATACTCAGGAATT+AGG | - | chr1_4:24443234-24443253 | Msa0157310:intron | 20.0% |
| !! | AAGATATTATCATACAAAGT+TGG | + | chr1_4:24443376-24443395 | None:intergenic | 20.0% |
| !! | GGATGTATATTAGAAATATA+AGG | - | chr1_4:24443470-24443489 | Msa0157310:intron | 20.0% |
| !! | TTGAAGATGGATAAAATTAT+TGG | + | chr1_4:24443627-24443646 | None:intergenic | 20.0% |
| !!! | TATTTTACAGCACATTTAAT+AGG | + | chr1_4:24444018-24444037 | None:intergenic | 20.0% |
| !!! | ACGGTTTTTTTTATGAGAAT+CGG | + | chr1_4:24437940-24437959 | None:intergenic | 25.0% |
| ! | ACAAAATCAAACTACGATTA+TGG | + | chr1_4:24438065-24438084 | None:intergenic | 25.0% |
| ! | AGTTAGTATTTATTTCCTTG+CGG | - | chr1_4:24438173-24438192 | Msa0157310:three_prime_UTR | 25.0% |
| ! | TAGGAAAGGACATAAAAAAA+GGG | + | chr1_4:24438413-24438432 | None:intergenic | 25.0% |
| ! | ATAGGAAAGGACATAAAAAA+AGG | + | chr1_4:24438414-24438433 | None:intergenic | 25.0% |
| !! | TTTCTTTTTAACCAAAAGAG+GGG | + | chr1_4:24438442-24438461 | None:intergenic | 25.0% |
| !! | CTTTCTTTTTAACCAAAAGA+GGG | + | chr1_4:24438443-24438462 | None:intergenic | 25.0% |
| !!! | TCTTTTGGTTAAAAAGAAAG+CGG | - | chr1_4:24438443-24438462 | Msa0157310:intron | 25.0% |
| ! | ACTGATCTTGTATAGAAAAA+AGG | - | chr1_4:24438479-24438498 | Msa0157310:intron | 25.0% |
| ! | TGATGTTAAAACAAAAACCA+AGG | + | chr1_4:24438624-24438643 | None:intergenic | 25.0% |
| !!! | TTTTCGTGATGGAAAATAAA+TGG | - | chr1_4:24438692-24438711 | Msa0157310:intron | 25.0% |
| !! | AACATAGCATTTAAAACAAG+GGG | + | chr1_4:24439075-24439094 | None:intergenic | 25.0% |
| ! | AGCTCAGATAAAACAATATA+CGG | + | chr1_4:24439213-24439232 | None:intergenic | 25.0% |
| !!! | TATAGATCAAGGTTGATAAA+GGG | + | chr1_4:24439296-24439315 | None:intergenic | 25.0% |
| !!! | TTATAGATCAAGGTTGATAA+AGG | + | chr1_4:24439297-24439316 | None:intergenic | 25.0% |
| !!! | TAAATCTTTTTTGCAAGAGT+TGG | + | chr1_4:24439509-24439528 | None:intergenic | 25.0% |
| ! | TTTAAAAACGCAAAAGGTAA+TGG | - | chr1_4:24439525-24439544 | Msa0157310:intron | 25.0% |
| ! | ATAAATGTCATCTTTACATG+AGG | + | chr1_4:24439752-24439771 | None:intergenic | 25.0% |
| ! | TTTCTATATACAAACAAGAG+TGG | + | chr1_4:24439863-24439882 | None:intergenic | 25.0% |
| ! | ATACCTATTTATTATACACG+TGG | - | chr1_4:24440126-24440145 | Msa0157310:intron | 25.0% |
| ! | TATCCACGTGTATAATAAAT+AGG | + | chr1_4:24440132-24440151 | None:intergenic | 25.0% |
| ! | GAAAATTGATGAAACAATAC+AGG | - | chr1_4:24440504-24440523 | Msa0157310:intron | 25.0% |
| ! | TATGATTACCTTGATTATGT+AGG | + | chr1_4:24440627-24440646 | None:intergenic | 25.0% |
| ! | ATTCAATAGAATTGGACAAA+AGG | + | chr1_4:24440674-24440693 | None:intergenic | 25.0% |
| !! | GCATTTATTTAACTTTGCAA+GGG | + | chr1_4:24441055-24441074 | None:intergenic | 25.0% |
| !! | TGCATTTATTTAACTTTGCA+AGG | + | chr1_4:24441056-24441075 | None:intergenic | 25.0% |
| ! | ATGGAAATATTTCACAAATG+AGG | + | chr1_4:24441190-24441209 | None:intergenic | 25.0% |
| ! | ATAGGCTGATATAAACTATA+GGG | + | chr1_4:24441214-24441233 | None:intergenic | 25.0% |
| ! | AATAGGCTGATATAAACTAT+AGG | + | chr1_4:24441215-24441234 | None:intergenic | 25.0% |
| ! | TACTTCTCTGTCAAATTATT+TGG | - | chr1_4:24441315-24441334 | Msa0157310:CDS | 25.0% |
| ! | CAAATTATTTGGTTATCTCA+TGG | - | chr1_4:24441326-24441345 | Msa0157310:CDS | 25.0% |
| ! | ATGAAAAAAGGGATGAAAAA+GGG | + | chr1_4:24441413-24441432 | None:intergenic | 25.0% |
| ! | TCTGCAAAATGATGAAAAAA+GGG | + | chr1_4:24441424-24441443 | None:intergenic | 25.0% |
| !! | GTTTCAAAATCTTACAGTTT+TGG | + | chr1_4:24441658-24441677 | None:intergenic | 25.0% |
| !!! | TTTTGGCTTAATTGTAGTTT+TGG | + | chr1_4:24441688-24441707 | None:intergenic | 25.0% |
| ! | ACAATTAAGCCAAAACTAAT+AGG | - | chr1_4:24441693-24441712 | Msa0157310:intron | 25.0% |
| !!! | CAATTATCACCTATTAGTTT+TGG | + | chr1_4:24441705-24441724 | None:intergenic | 25.0% |
| !! | ACTCTAGAAAAAGGTTAAAT+TGG | - | chr1_4:24441770-24441789 | Msa0157310:intron | 25.0% |
| !! | AACTTTTTATGTAAGTTGTG+AGG | - | chr1_4:24441833-24441852 | Msa0157310:intron | 25.0% |
| ! | GAAATTCATAAAGACAAATC+TGG | - | chr1_4:24441952-24441971 | Msa0157310:intron | 25.0% |
| !!! | TACATGACTTCATTTTTGAT+TGG | - | chr1_4:24442062-24442081 | Msa0157310:CDS | 25.0% |
| !! | AGTATCAAACTTTTACTTCA+TGG | + | chr1_4:24442104-24442123 | None:intergenic | 25.0% |
| !!! | GATACTGTTTTTGATACAAT+TGG | - | chr1_4:24442118-24442137 | Msa0157310:intron | 25.0% |
| !!! | TTATTTTAGTGTTGTTCAGA+AGG | + | chr1_4:24442341-24442360 | None:intergenic | 25.0% |
| ! | TATACATCAAGTTTGATGAA+GGG | + | chr1_4:24442452-24442471 | None:intergenic | 25.0% |
| !!! | GTAAGTACTGTTTTATTCTT+TGG | - | chr1_4:24442502-24442521 | Msa0157310:intron | 25.0% |
| ! | TTATCTTACAACAGAAAAAG+AGG | + | chr1_4:24442699-24442718 | None:intergenic | 25.0% |
| ! | ACTATAACATCTTAATGAAG+AGG | + | chr1_4:24442963-24442982 | None:intergenic | 25.0% |
| !! | TTCAGTTACACTTCATTTTA+TGG | + | chr1_4:24443081-24443100 | None:intergenic | 25.0% |
| ! | ATGAAAATAAAAGAATGGAG+AGG | - | chr1_4:24443122-24443141 | Msa0157310:intron | 25.0% |
| ! | TTGTGTCTTAATTAATACTC+AGG | - | chr1_4:24443227-24443246 | Msa0157310:intron | 25.0% |
| ! | AGAAATGCTAAACAAAACAA+TGG | + | chr1_4:24443311-24443330 | None:intergenic | 25.0% |
| !! | ATCATACTTTTCTCCAAATA+TGG | - | chr1_4:24443428-24443447 | Msa0157310:intron | 25.0% |
| ! | TCTAATATACATCCTTCTAA+TGG | + | chr1_4:24443464-24443483 | None:intergenic | 25.0% |
| ! | ATGAGAAACAACAAATATGA+AGG | + | chr1_4:24443564-24443583 | None:intergenic | 25.0% |
| ! | GGGAATACACAAAAAAAAAA+AGG | - | chr1_4:24443657-24443676 | Msa0157310:intron | 25.0% |
| ! | AAAAAAGGAAACAAATGAGA+AGG | - | chr1_4:24443672-24443691 | Msa0157310:intron | 25.0% |
| ! | ATTATTGAACCATCAAAATC+TGG | - | chr1_4:24443725-24443744 | Msa0157310:intron | 25.0% |
| ! | TGTAGTAGAACAATTAGTAT+GGG | - | chr1_4:24443791-24443810 | Msa0157310:intron | 25.0% |
| !!! | TATTTTTTTGCTTTATAGGG+TGG | - | chr1_4:24443958-24443977 | Msa0157310:CDS | 25.0% |
| ! | ATAAACAAAACAGCCTATAA+AGG | + | chr1_4:24443986-24444005 | None:intergenic | 25.0% |
| ! | ACATTAAATTAATCCTACCT+AGG | - | chr1_4:24444051-24444070 | Msa0157310:CDS | 25.0% |
| AATGGTTTCGAAAAATGAGT+CGG | + | chr1_4:24437844-24437863 | None:intergenic | 30.0% | |
| ! | TTTGCACGGTCAAAATATTT+TGG | - | chr1_4:24438025-24438044 | Msa0157310:three_prime_UTR | 30.0% |
| ! | TTGCACGGTCAAAATATTTT+GGG | - | chr1_4:24438026-24438045 | Msa0157310:three_prime_UTR | 30.0% |
| AAATAAGGAAAAAATCCGCA+AGG | + | chr1_4:24438191-24438210 | None:intergenic | 30.0% | |
| TATAACCTACTTGTCTAATG+TGG | - | chr1_4:24438255-24438274 | Msa0157310:intron | 30.0% | |
| ATATTCCACATTAGACAAGT+AGG | + | chr1_4:24438263-24438282 | None:intergenic | 30.0% | |
| TGCAAGTAATGGCTAAATAA+CGG | - | chr1_4:24438367-24438386 | Msa0157310:intron | 30.0% | |
| ! | GCTTTCTTTTTAACCAAAAG+AGG | + | chr1_4:24438444-24438463 | None:intergenic | 30.0% |
| TAATGAATTTGTATGATCGC+TGG | - | chr1_4:24438591-24438610 | Msa0157310:intron | 30.0% | |
| !! | GTTTTAACATCATAGTGATG+AGG | - | chr1_4:24438632-24438651 | Msa0157310:intron | 30.0% |
| TATATCGCAACTAACTTTGT+GGG | + | chr1_4:24438736-24438755 | None:intergenic | 30.0% | |
| ! | TAGTTATTTCAAAAGTGGTG+CGG | + | chr1_4:24438822-24438841 | None:intergenic | 30.0% |
| TTTGAAAACTGGTTATTTGC+AGG | + | chr1_4:24438880-24438899 | None:intergenic | 30.0% | |
| !!! | ATAGCCCTTTTTTTGAAAAC+TGG | + | chr1_4:24438891-24438910 | None:intergenic | 30.0% |
| ! | ATTTGTCTATTTGCTAGCAA+TGG | - | chr1_4:24439352-24439371 | Msa0157310:intron | 30.0% |
| !!! | AATGGATACGATTTTGAGTT+TGG | - | chr1_4:24439370-24439389 | Msa0157310:intron | 30.0% |
| GAAGAAGCAATTGTAATACA+AGG | - | chr1_4:24439400-24439419 | Msa0157310:intron | 30.0% | |
| AATATGCTCAAAGAATGCAT+TGG | - | chr1_4:24439556-24439575 | Msa0157310:intron | 30.0% | |
| ATATGCTCAAAGAATGCATT+GGG | - | chr1_4:24439557-24439576 | Msa0157310:intron | 30.0% | |
| AACAGAAACATGTTTGACAA+TGG | + | chr1_4:24439822-24439841 | None:intergenic | 30.0% | |
| TATACAAACAAGAGTGGAAA+AGG | + | chr1_4:24439857-24439876 | None:intergenic | 30.0% | |
| !! | AAACACAACAATTTGGGTTT+TGG | + | chr1_4:24439886-24439905 | None:intergenic | 30.0% |
| AATTGATGAAACAATACAGG+AGG | - | chr1_4:24440507-24440526 | Msa0157310:intron | 30.0% | |
| ATGACATAAAGGAGATAAGA+TGG | - | chr1_4:24440551-24440570 | Msa0157310:intron | 30.0% | |
| AGGTCAACATATGATATGTT+GGG | + | chr1_4:24440654-24440673 | None:intergenic | 30.0% | |
| AAGGTCAACATATGATATGT+TGG | + | chr1_4:24440655-24440674 | None:intergenic | 30.0% | |
| AAGTTTAACAAAGAGCTCTA+CGG | + | chr1_4:24440759-24440778 | None:intergenic | 30.0% | |
| GTTAAACTTAATTTACACCC+TGG | - | chr1_4:24440770-24440789 | Msa0157310:intron | 30.0% | |
| ! | CTTTTTATGCAATATGTCCA+GGG | + | chr1_4:24440790-24440809 | None:intergenic | 30.0% |
| ! | ACTTTTTATGCAATATGTCC+AGG | + | chr1_4:24440791-24440810 | None:intergenic | 30.0% |
| GAAATGCATAAACAACATGA+AGG | - | chr1_4:24440964-24440983 | Msa0157310:intron | 30.0% | |
| GAAATATTTCACAAATGAGG+AGG | + | chr1_4:24441187-24441206 | None:intergenic | 30.0% | |
| CTGATATAAACTATAGGGTA+TGG | + | chr1_4:24441209-24441228 | None:intergenic | 30.0% | |
| !!! | AGAAGATAGTTTTGATAGCA+AGG | + | chr1_4:24441353-24441372 | None:intergenic | 30.0% |
| AAAACTATCTTCTGATACCA+AGG | - | chr1_4:24441360-24441379 | Msa0157310:intron | 30.0% | |
| CAAGGATATACTCTTAATTG+CGG | - | chr1_4:24441378-24441397 | Msa0157310:intron | 30.0% | |
| ! | TATACTCTTAATTGCGGTTT+TGG | - | chr1_4:24441384-24441403 | Msa0157310:intron | 30.0% |
| TGAAAAAAGGGATGAAAAAG+GGG | + | chr1_4:24441412-24441431 | None:intergenic | 30.0% | |
| GATGAAAAAAGGGATGAAAA+AGG | + | chr1_4:24441414-24441433 | None:intergenic | 30.0% | |
| CTCTGCAAAATGATGAAAAA+AGG | + | chr1_4:24441425-24441444 | None:intergenic | 30.0% | |
| AGACAAAATAAGTTTGTGGT+GGG | + | chr1_4:24441482-24441501 | None:intergenic | 30.0% | |
| TAGACAAAATAAGTTTGTGG+TGG | + | chr1_4:24441483-24441502 | None:intergenic | 30.0% | |
| !!! | ACTGTAAGATTTTGAAACAG+CGG | - | chr1_4:24441660-24441679 | Msa0157310:intron | 30.0% |
| TAATTGCAACACCGTAATAT+TGG | - | chr1_4:24441719-24441738 | Msa0157310:intron | 30.0% | |
| GGTTAAATATGTTAGACATC+TGG | - | chr1_4:24441744-24441763 | Msa0157310:intron | 30.0% | |
| ! | ATCTGGTTAACTCTAGAAAA+AGG | - | chr1_4:24441761-24441780 | Msa0157310:intron | 30.0% |
| !! | ATGACTTCATTTTTGATTGG+CGG | - | chr1_4:24442065-24442084 | Msa0157310:CDS | 30.0% |
| GAAAGTAATCATGTTCCTTA+TGG | - | chr1_4:24442405-24442424 | Msa0157310:intron | 30.0% | |
| TTCCTTATGGAATTCATCAT+AGG | - | chr1_4:24442418-24442437 | Msa0157310:intron | 30.0% | |
| ATCCTATGATGAATTCCATA+AGG | + | chr1_4:24442423-24442442 | None:intergenic | 30.0% | |
| CTATACATCAAGTTTGATGA+AGG | + | chr1_4:24442453-24442472 | None:intergenic | 30.0% | |
| GTGCTTGTTTAAATTCATTG+TGG | - | chr1_4:24442524-24442543 | Msa0157310:intron | 30.0% | |
| TTTGCTTTGTAACTTAGCAA+TGG | - | chr1_4:24442569-24442588 | Msa0157310:intron | 30.0% | |
| !! | AAAGAGGTATTGGATAGAAA+AGG | + | chr1_4:24442683-24442702 | None:intergenic | 30.0% |
| ! | TACAACAGAAAAAGAGGTAT+TGG | + | chr1_4:24442693-24442712 | None:intergenic | 30.0% |
| ! | CTTTCTAAAAACATCGAGAT+AGG | - | chr1_4:24442731-24442750 | Msa0157310:intron | 30.0% |
| TAAAAACATCGAGATAGGAA+AGG | - | chr1_4:24442736-24442755 | Msa0157310:intron | 30.0% | |
| TTCCAACTGTAAAAATGAAG+AGG | - | chr1_4:24443034-24443053 | Msa0157310:intron | 30.0% | |
| !! | ATCCTCTTCATTTTTACAGT+TGG | + | chr1_4:24443039-24443058 | None:intergenic | 30.0% |
| AAAAGAATGGAGAGGTTAAA+AGG | - | chr1_4:24443130-24443149 | Msa0157310:intron | 30.0% | |
| TTAATACTCAGGAATTAGGA+TGG | - | chr1_4:24443238-24443257 | Msa0157310:intron | 30.0% | |
| CTAAACAAAACAATGGATGA+TGG | + | chr1_4:24443304-24443323 | None:intergenic | 30.0% | |
| TGGAAGATGAATTCCATATT+TGG | + | chr1_4:24443444-24443463 | None:intergenic | 30.0% | |
| CTGAGAAGCAAAAAATGAAT+AGG | - | chr1_4:24443508-24443527 | Msa0157310:intron | 30.0% | |
| ACCTTTGTACACAATTTATC+TGG | - | chr1_4:24443534-24443553 | Msa0157310:CDS | 30.0% | |
| ACCAGATAAATTGTGTACAA+AGG | + | chr1_4:24443538-24443557 | None:intergenic | 30.0% | |
| GAAAAGCTATTACATGAGAA+AGG | + | chr1_4:24443605-24443624 | None:intergenic | 30.0% | |
| GTGTAGTAGAACAATTAGTA+TGG | - | chr1_4:24443790-24443809 | Msa0157310:intron | 30.0% | |
| AGTCGGATAGAATTGTAGAT+CGG | + | chr1_4:24437827-24437846 | None:intergenic | 35.0% | |
| ! | TGCACGGTCAAAATATTTTG+GGG | - | chr1_4:24438027-24438046 | Msa0157310:three_prime_UTR | 35.0% |
| AAATTGTGCCAAAAGCTTCT+TGG | - | chr1_4:24438340-24438359 | Msa0157310:intron | 35.0% | |
| AATTGTGCCAAAAGCTTCTT+GGG | - | chr1_4:24438341-24438360 | Msa0157310:intron | 35.0% | |
| TTCTTGGGAAATGCAAGTAA+TGG | - | chr1_4:24438356-24438375 | Msa0157310:intron | 35.0% | |
| GTATATCGCAACTAACTTTG+TGG | + | chr1_4:24438737-24438756 | None:intergenic | 35.0% | |
| ATACAATCTGTGTTCGCATT+GGG | + | chr1_4:24438759-24438778 | None:intergenic | 35.0% | |
| AATACAATCTGTGTTCGCAT+TGG | + | chr1_4:24438760-24438779 | None:intergenic | 35.0% | |
| CGAACACAGATTGTATTTGT+TGG | - | chr1_4:24438763-24438782 | Msa0157310:intron | 35.0% | |
| ! | GGTGTTGAATACAAAAAGAG+TGG | + | chr1_4:24438852-24438871 | None:intergenic | 35.0% |
| ACTGGTTATTTGCAGGTTAT+TGG | + | chr1_4:24438873-24438892 | None:intergenic | 35.0% | |
| ! | GTAGTCTAATGCTCTGTTTT+AGG | - | chr1_4:24439102-24439121 | Msa0157310:intron | 35.0% |
| AATGATGAAGCATAAGCATG+TGG | - | chr1_4:24439428-24439447 | Msa0157310:intron | 35.0% | |
| ATGATGAAGCATAAGCATGT+GGG | - | chr1_4:24439429-24439448 | Msa0157310:intron | 35.0% | |
| AAAGAGGTAATAGACAGAAG+AGG | + | chr1_4:24439459-24439478 | None:intergenic | 35.0% | |
| ! | TCATTTTCAGCTATGGTGTA+CGG | - | chr1_4:24439774-24439793 | Msa0157310:intron | 35.0% |
| ATAGCGTTCAAAGCAGAAAT+TGG | + | chr1_4:24440032-24440051 | None:intergenic | 35.0% | |
| ! | TCTGCTTTGAACGCTATTAT+CGG | - | chr1_4:24440035-24440054 | Msa0157310:intron | 35.0% |
| AATAAAATTTGTCACGGGCA+CGG | + | chr1_4:24440173-24440192 | None:intergenic | 35.0% | |
| CGACGAATAAAATTTGTCAC+GGG | + | chr1_4:24440178-24440197 | None:intergenic | 35.0% | |
| CCGACGAATAAAATTTGTCA+CGG | + | chr1_4:24440179-24440198 | None:intergenic | 35.0% | |
| ! | CCGTGACAAATTTTATTCGT+CGG | - | chr1_4:24440176-24440195 | Msa0157310:intron | 35.0% |
| CCCTCAACATTTGATATATG+CGG | + | chr1_4:24440259-24440278 | None:intergenic | 35.0% | |
| CCGCATATATCAAATGTTGA+GGG | - | chr1_4:24440256-24440275 | Msa0157310:intron | 35.0% | |
| GAGAATGAAGGATGACATAA+AGG | - | chr1_4:24440540-24440559 | Msa0157310:intron | 35.0% | |
| GCACCTATTATTTCCGAAAA+TGG | - | chr1_4:24440573-24440592 | Msa0157310:intron | 35.0% | |
| ! | GCTCCATTTTCGGAAATAAT+AGG | + | chr1_4:24440579-24440598 | None:intergenic | 35.0% |
| GATCAACTCCTACATAATCA+AGG | - | chr1_4:24440616-24440635 | Msa0157310:intron | 35.0% | |
| CAACATATGATATGTTGGGT+GGG | + | chr1_4:24440650-24440669 | None:intergenic | 35.0% | |
| TCAACATATGATATGTTGGG+TGG | + | chr1_4:24440651-24440670 | None:intergenic | 35.0% | |
| AAATCACAACAGTAGCATGA+AGG | + | chr1_4:24440912-24440931 | None:intergenic | 35.0% | |
| ! | ACTCTTTGCTAGCTTAGTTA+TGG | + | chr1_4:24440998-24441017 | None:intergenic | 35.0% |
| ! | TAAGCTAGCAAAGAGTATGA+AGG | - | chr1_4:24441002-24441021 | Msa0157310:intron | 35.0% |
| ! | AAGCTAGCAAAGAGTATGAA+GGG | - | chr1_4:24441003-24441022 | Msa0157310:intron | 35.0% |
| CAGGAATCATCTATGTTGAT+CGG | + | chr1_4:24441079-24441098 | None:intergenic | 35.0% | |
| CGTAGACTTAAAATACAAGC+AGG | + | chr1_4:24441098-24441117 | None:intergenic | 35.0% | |
| ATATTTCACAAATGAGGAGG+AGG | + | chr1_4:24441184-24441203 | None:intergenic | 35.0% | |
| ! | CGCAATTAAGAGTATATCCT+TGG | + | chr1_4:24441380-24441399 | None:intergenic | 35.0% |
| GAAAAAAGGGATGAAAAAGG+GGG | + | chr1_4:24441411-24441430 | None:intergenic | 35.0% | |
| GGTGATATGACATGCTTTAA+AGG | - | chr1_4:24441509-24441528 | Msa0157310:intron | 35.0% | |
| !!! | CTGTAAGATTTTGAAACAGC+GGG | - | chr1_4:24441661-24441680 | Msa0157310:intron | 35.0% |
| !! | TGATTGGCGGATTTATGAAT+TGG | - | chr1_4:24442078-24442097 | Msa0157310:CDS | 35.0% |
| GGAATTCATCATAGGATTAG+CGG | - | chr1_4:24442426-24442445 | Msa0157310:intron | 35.0% | |
| GGAATTCATCTTCCATTAGA+AGG | - | chr1_4:24443449-24443468 | Msa0157310:intron | 35.0% | |
| ! | TCCATCTTCAAATTTTCTGC+AGG | - | chr1_4:24443636-24443655 | Msa0157310:intron | 35.0% |
| ! | CCATCTTCAAATTTTCTGCA+GGG | - | chr1_4:24443637-24443656 | Msa0157310:intron | 35.0% |
| GAAACAAATGAGAAGGTCAT+TGG | - | chr1_4:24443679-24443698 | Msa0157310:intron | 35.0% | |
| GAAGGTCATTGGAGAATATA+AGG | - | chr1_4:24443690-24443709 | Msa0157310:intron | 35.0% | |
| ! | TGTTTAGGTCCAGATTTTGA+TGG | + | chr1_4:24443737-24443756 | None:intergenic | 35.0% |
| ATCTGGACCTAAACATAAAG+AGG | - | chr1_4:24443742-24443761 | Msa0157310:intron | 35.0% | |
| CTTTCCACCTCTTTATGTTT+AGG | + | chr1_4:24443752-24443771 | None:intergenic | 35.0% | |
| CTAAACATAAAGAGGTGGAA+AGG | - | chr1_4:24443750-24443769 | Msa0157310:intron | 35.0% | |
| TAAAGAGGTGGAAAGGAATA+TGG | - | chr1_4:24443757-24443776 | Msa0157310:intron | 35.0% | |
| AAAGAGGTGGAAAGGAATAT+GGG | - | chr1_4:24443758-24443777 | Msa0157310:intron | 35.0% | |
| TCAATGACAAAGCGATATAG+AGG | - | chr1_4:24443830-24443849 | Msa0157310:intron | 35.0% | |
| TGATATGCTTTCTATTGCCT+AGG | + | chr1_4:24444071-24444090 | None:intergenic | 35.0% | |
| TTCTTGGGATGATCCATTTC+CGG | - | chr1_4:24437882-24437901 | Msa0157310:three_prime_UTR | 40.0% | |
| !! | GCACGGTCAAAATATTTTGG+GGG | - | chr1_4:24438028-24438047 | Msa0157310:three_prime_UTR | 40.0% |
| ! | TTTTCATGTTGCAGGGATGT+AGG | - | chr1_4:24438311-24438330 | Msa0157310:intron | 40.0% |
| ! | TGCATTTCCCAAGAAGCTTT+TGG | + | chr1_4:24438351-24438370 | None:intergenic | 40.0% |
| AAGAGGGGATTACATAGGAA+AGG | + | chr1_4:24438427-24438446 | None:intergenic | 40.0% | |
| ! | TCCTATGTAATCCCCTCTTT+TGG | - | chr1_4:24438428-24438447 | Msa0157310:intron | 40.0% |
| ACCAAAAGAGGGGATTACAT+AGG | + | chr1_4:24438432-24438451 | None:intergenic | 40.0% | |
| TGAAATCTACACATAGCTGC+AGG | - | chr1_4:24438666-24438685 | Msa0157310:intron | 40.0% | |
| !!! | TTGGGATTTTTTCCCTCTCT+CGG | - | chr1_4:24439575-24439594 | Msa0157310:intron | 40.0% |
| !!! | ATTTTTTCCCTCTCTCGGAT+TGG | - | chr1_4:24439580-24439599 | Msa0157310:intron | 40.0% |
| AAACAATCCAATCCGAGAGA+GGG | + | chr1_4:24439590-24439609 | None:intergenic | 40.0% | |
| AAAACAATCCAATCCGAGAG+AGG | + | chr1_4:24439591-24439610 | None:intergenic | 40.0% | |
| ! | CATTTTCAGCTATGGTGTAC+GGG | - | chr1_4:24439775-24439794 | Msa0157310:intron | 40.0% |
| TTGACAATGGCTTGAAGTTC+CGG | + | chr1_4:24439809-24439828 | None:intergenic | 40.0% | |
| ! | ACATGTTTCTGTTGCATCCA+TGG | - | chr1_4:24439829-24439848 | Msa0157310:intron | 40.0% |
| ! | CTGCTTTGAACGCTATTATC+GGG | - | chr1_4:24440036-24440055 | Msa0157310:intron | 40.0% |
| TTGAACGCTATTATCGGGTA+TGG | - | chr1_4:24440041-24440060 | Msa0157310:intron | 40.0% | |
| TGAACGCTATTATCGGGTAT+GGG | - | chr1_4:24440042-24440061 | Msa0157310:intron | 40.0% | |
| ATAAAATTTGTCACGGGCAC+GGG | + | chr1_4:24440172-24440191 | None:intergenic | 40.0% | |
| CCAGGGATGGCAAAAAAAAA+CGG | + | chr1_4:24440214-24440233 | None:intergenic | 40.0% | |
| GCCGCATATATCAAATGTTG+AGG | - | chr1_4:24440255-24440274 | Msa0157310:intron | 40.0% | |
| ! | AGGAAGATCTGCTCCATTTT+CGG | + | chr1_4:24440589-24440608 | None:intergenic | 40.0% |
| AGCTCTACGGAATTGGAATT+TGG | + | chr1_4:24440746-24440765 | None:intergenic | 40.0% | |
| AACAAAGAGCTCTACGGAAT+TGG | + | chr1_4:24440753-24440772 | None:intergenic | 40.0% | |
| CTCTTCCACAATCAACTCAT+GGG | + | chr1_4:24440945-24440964 | None:intergenic | 40.0% | |
| TCTCTTCCACAATCAACTCA+TGG | + | chr1_4:24440946-24440965 | None:intergenic | 40.0% | |
| TGCAACACCGTAATATTGGT+TGG | - | chr1_4:24441723-24441742 | Msa0157310:intron | 40.0% | |
| TTGGTGTGCTAGATACAGAA+CGG | - | chr1_4:24442137-24442156 | Msa0157310:intron | 40.0% | |
| TAGAGCCTAAGCAGATCTAA+TGG | - | chr1_4:24442253-24442272 | Msa0157310:intron | 40.0% | |
| CAATGGATATCGTCTGAGTT+TGG | - | chr1_4:24442586-24442605 | Msa0157310:intron | 40.0% | |
| TTAATGAAGAGGCAAGCGTA+AGG | + | chr1_4:24442952-24442971 | None:intergenic | 40.0% | |
| CATGAGAAAGGTGATGAATG+AGG | + | chr1_4:24443593-24443612 | None:intergenic | 40.0% | |
| CCCTGCAGAAAATTTGAAGA+TGG | + | chr1_4:24443640-24443659 | None:intergenic | 40.0% | |
| TGGACCTAAACATAAAGAGG+TGG | - | chr1_4:24443745-24443764 | Msa0157310:intron | 40.0% | |
| ATGACAAAGCGATATAGAGG+TGG | - | chr1_4:24443833-24443852 | Msa0157310:intron | 40.0% | |
| GATATAGAGGTGGAAGGAAA+TGG | - | chr1_4:24443843-24443862 | Msa0157310:intron | 40.0% | |
| TTATAGGGTGGAGCCTTTAT+AGG | - | chr1_4:24443970-24443989 | Msa0157310:CDS | 40.0% | |
| ATGCTTTCTATTGCCTAGGT+AGG | + | chr1_4:24444067-24444086 | None:intergenic | 40.0% | |
| GAATTGTAGATCGGACAGAG+AGG | + | chr1_4:24437818-24437837 | None:intergenic | 45.0% | |
| GAGTCTCGACAGCAACTTAA+TGG | + | chr1_4:24437862-24437881 | None:intergenic | 45.0% | |
| TTGCTGTCGAGACTCTTCTT+GGG | - | chr1_4:24437867-24437886 | Msa0157310:three_prime_UTR | 45.0% | |
| TCGACATCTGAGCAAGTCAT+CGG | - | chr1_4:24437978-24437997 | Msa0157310:three_prime_UTR | 45.0% | |
| !! | TGATCGCTGGTTTAAAGCCT+TGG | - | chr1_4:24438604-24438623 | Msa0157310:intron | 45.0% |
| !! | TGGCTTTGTGTGACTCTTGT+TGG | - | chr1_4:24438783-24438802 | Msa0157310:intron | 45.0% |
| ! | GTTTTATCTGAGCTCTCTGC+TGG | - | chr1_4:24439219-24439238 | Msa0157310:intron | 45.0% |
| CAGATACGTGACACTGATGA+CGG | + | chr1_4:24439268-24439287 | None:intergenic | 45.0% | |
| !! | CAAGAGTGGAAAAGGTACCA+TGG | + | chr1_4:24439849-24439868 | None:intergenic | 45.0% |
| TAAAATTTGTCACGGGCACG+GGG | + | chr1_4:24440171-24440190 | None:intergenic | 45.0% | |
| CAAAAAAAAACGGTGCACGC+TGG | + | chr1_4:24440204-24440223 | None:intergenic | 45.0% | |
| !!! | CCGTTTTTTTTTGCCATCCC+TGG | - | chr1_4:24440211-24440230 | Msa0157310:intron | 45.0% |
| ! | ACTTTTCTTTGGACCAGGGA+TGG | + | chr1_4:24440227-24440246 | None:intergenic | 45.0% |
| ! | CGCAACTTTTCTTTGGACCA+GGG | + | chr1_4:24440231-24440250 | None:intergenic | 45.0% |
| ! | ACGCAACTTTTCTTTGGACC+AGG | + | chr1_4:24440232-24440251 | None:intergenic | 45.0% |
| GGTCGTGTTGAAGAGAATGA+AGG | - | chr1_4:24440528-24440547 | Msa0157310:intron | 45.0% | |
| ATGGAGCAGATCTTCCTGTT+TGG | - | chr1_4:24440592-24440611 | Msa0157310:intron | 45.0% | |
| ! | GTAGGAGTTGATCTCCAAAC+AGG | + | chr1_4:24440609-24440628 | None:intergenic | 45.0% |
| !! | AGAGTCCCATGAGTTGATTG+TGG | - | chr1_4:24440937-24440956 | Msa0157310:intron | 45.0% |
| TGTGCTAGATACAGAACGGA+TGG | - | chr1_4:24442141-24442160 | Msa0157310:intron | 45.0% | |
| CACGTCCATTAGATCTGCTT+AGG | + | chr1_4:24442261-24442280 | None:intergenic | 45.0% | |
| ! | AGCAGATCTAATGGACGTGA+TGG | - | chr1_4:24442262-24442281 | Msa0157310:intron | 45.0% |
| ! | GCAGATCTAATGGACGTGAT+GGG | - | chr1_4:24442263-24442282 | Msa0157310:intron | 45.0% |
| !! | AATGGACGTGATGGGTCAAA+AGG | - | chr1_4:24442271-24442290 | Msa0157310:intron | 45.0% |
| ATCGTCTGAGTTTGGAGAGT+TGG | - | chr1_4:24442594-24442613 | Msa0157310:intron | 45.0% | |
| CATCGAGATAGGAAAGGTTG+TGG | - | chr1_4:24442742-24442761 | Msa0157310:intron | 45.0% | |
| CAAAGCGATATAGAGGTGGA+AGG | - | chr1_4:24443837-24443856 | Msa0157310:intron | 45.0% | |
| AGGTGGAAGGAAATGGACAT+TGG | - | chr1_4:24443850-24443869 | Msa0157310:intron | 45.0% | |
| GGAGCATAACACTGCAACAA+AGG | - | chr1_4:24443871-24443890 | Msa0157310:intron | 45.0% | |
| !! | AAAGAATTAAAATAAAAAAT+AGG | + | chr1_4:24441232-24441251 | None:intergenic | 5.0% |
| !!! | TATTTTTTATTTTAATTCTT+TGG | - | chr1_4:24441231-24441250 | Msa0157310:intron | 5.0% |
| !!! | TATAAATTATATTTCTAATT+AGG | - | chr1_4:24442377-24442396 | Msa0157310:intron | 5.0% |
| TTGTAGATCGGACAGAGAGG+AGG | + | chr1_4:24437815-24437834 | None:intergenic | 50.0% | |
| GTTGCTGTCGAGACTCTTCT+TGG | - | chr1_4:24437866-24437885 | Msa0157310:three_prime_UTR | 50.0% | |
| ATCGGAGATCCAGTACTCGA+CGG | + | chr1_4:24437922-24437941 | None:intergenic | 50.0% | |
| !! | GCGCTAGAAGTCGTTTTGCA+CGG | - | chr1_4:24438011-24438030 | Msa0157310:three_prime_UTR | 50.0% |
| TCATGTTGCAGGGATGTAGG+TGG | - | chr1_4:24438314-24438333 | Msa0157310:intron | 50.0% | |
| ! | CATAGTGATGAGGCGTCTCA+TGG | - | chr1_4:24438642-24438661 | Msa0157310:intron | 50.0% |
| ! | TGGTGTACGGGTTACATCTC+CGG | - | chr1_4:24439787-24439806 | Msa0157310:intron | 50.0% |
| ! | GGCTGCACGCAACTTTTCTT+TGG | + | chr1_4:24440238-24440257 | None:intergenic | 50.0% |
| CTCAGGAATTAGGATGGCGT+TGG | - | chr1_4:24443244-24443263 | Msa0157310:intron | 50.0% | |
| !! | AGGATGGCGTTGGAGTGTTT+TGG | - | chr1_4:24443254-24443273 | Msa0157310:intron | 50.0% |
| !! | GATGATGGTACTGACCAGCA+GGG | + | chr1_4:24443289-24443308 | None:intergenic | 50.0% |
| TCGGACAGAGAGGAGGAAGA+TGG | + | chr1_4:24437808-24437827 | None:intergenic | 55.0% | |
| TCCAGTACTCGACGGATGCT+CGG | + | chr1_4:24437914-24437933 | None:intergenic | 55.0% | |
| !! | GCTGCAGGCTGTTTTCGTGA+TGG | - | chr1_4:24438681-24438700 | Msa0157310:intron | 55.0% |
| TTATCGGGTATGGGTACCCG+CGG | - | chr1_4:24440051-24440070 | Msa0157310:intron | 55.0% | |
| TTTGCTGATACCCGTTCCCG+CGG | + | chr1_4:24440071-24440090 | None:intergenic | 55.0% | |
| TTTGGCAGTGATCTCCCTGC+TGG | - | chr1_4:24443272-24443291 | Msa0157310:intron | 55.0% | |
| !! | GGATGATGGTACTGACCAGC+AGG | + | chr1_4:24443290-24443309 | None:intergenic | 55.0% |
| AGTACTCGACGGATGCTCGG+AGG | + | chr1_4:24437911-24437930 | None:intergenic | 60.0% | |
| TCCGAGCATCCGTCGAGTAC+TGG | - | chr1_4:24437910-24437929 | Msa0157310:three_prime_UTR | 60.0% | |
| TATCGGGTATGGGTACCCGC+GGG | - | chr1_4:24440052-24440071 | Msa0157310:intron | 60.0% | |
| TTGCTGATACCCGTTCCCGC+GGG | + | chr1_4:24440070-24440089 | None:intergenic | 60.0% | |
| ! | GCACGGGGCTGGTAGCTAAA+CGG | + | chr1_4:24440156-24440175 | None:intergenic | 60.0% |
| TGCTCGGAGGTCGCCGGAAA+TGG | + | chr1_4:24437898-24437917 | None:intergenic | 65.0% | |
| GGTATGGGTACCCGCGGGAA+CGG | - | chr1_4:24440057-24440076 | Msa0157310:intron | 65.0% | |
| GTATGGGTACCCGCGGGAAC+GGG | - | chr1_4:24440058-24440077 | Msa0157310:intron | 65.0% | |
| ATTTGTCACGGGCACGGGGC+TGG | + | chr1_4:24440167-24440186 | None:intergenic | 65.0% | |
| GACGGATGCTCGGAGGTCGC+CGG | + | chr1_4:24437904-24437923 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 24437796 | 24444102 | 24437796 | ID=Msa0157310;Name=Msa0157310 |
| chr1_4 | mRNA | 24437796 | 24444102 | 24437796 | ID=Msa0157310-mRNA-1;Parent=Msa0157310;Name=Msa0157310-mRNA-1;_AED=0.41;_eAED=0.52;_QI=0|0.4|0.66|1|0.8|0.66|6|413|154 |
| chr1_4 | exon | 24437796 | 24438240 | 24437796 | ID=Msa0157310-mRNA-1:exon:8455;Parent=Msa0157310-mRNA-1 |
| chr1_4 | exon | 24438605 | 24438649 | 24438605 | ID=Msa0157310-mRNA-1:exon:8454;Parent=Msa0157310-mRNA-1 |
| chr1_4 | exon | 24441261 | 24441372 | 24441261 | ID=Msa0157310-mRNA-1:exon:8453;Parent=Msa0157310-mRNA-1 |
| chr1_4 | exon | 24442048 | 24442114 | 24442048 | ID=Msa0157310-mRNA-1:exon:8452;Parent=Msa0157310-mRNA-1 |
| chr1_4 | exon | 24443527 | 24443573 | 24443527 | ID=Msa0157310-mRNA-1:exon:8451;Parent=Msa0157310-mRNA-1 |
| chr1_4 | exon | 24443941 | 24444102 | 24443941 | ID=Msa0157310-mRNA-1:exon:8450;Parent=Msa0157310-mRNA-1 |
| chr1_4 | CDS | 24443941 | 24444102 | 24443941 | ID=Msa0157310-mRNA-1:cds;Parent=Msa0157310-mRNA-1 |
| chr1_4 | CDS | 24443527 | 24443573 | 24443527 | ID=Msa0157310-mRNA-1:cds;Parent=Msa0157310-mRNA-1 |
| chr1_4 | CDS | 24442048 | 24442114 | 24442048 | ID=Msa0157310-mRNA-1:cds;Parent=Msa0157310-mRNA-1 |
| chr1_4 | CDS | 24441261 | 24441372 | 24441261 | ID=Msa0157310-mRNA-1:cds;Parent=Msa0157310-mRNA-1 |
| chr1_4 | CDS | 24438605 | 24438649 | 24438605 | ID=Msa0157310-mRNA-1:cds;Parent=Msa0157310-mRNA-1 |
| chr1_4 | CDS | 24438209 | 24438240 | 24438209 | ID=Msa0157310-mRNA-1:cds;Parent=Msa0157310-mRNA-1 |
| chr1_4 | three_prime_UTR | 24437796 | 24438208 | 24437796 | ID=Msa0157310-mRNA-1:three_prime_utr;Parent=Msa0157310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
