AlfalfaGEDB | Msa0646240

M. sativa cultivar zhongmu-4 / Msa0646240

KEGG: K03809
GO: -
PFAM: PF03358.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0646240	XP_013456379.1	94.574	258	8	1	1	258	1	252	1.94e-176	495

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0646240	sp\|O23207\|FQRL2_ARATH	65.809	272	77	1	1	256	1	272	4.68e-122	351

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0646240	A0A072UX31	94.574	258	8	1	1	258	1	252	9.25e-177	495

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0011840	Msa0646240	0.845582	3.711530e-59	-8.615850e-47
Msa0030700	Msa0646240	0.808351	3.231769e-50	-8.615850e-47
Msa0060670	Msa0646240	0.813088	3.055275e-51	-8.615850e-47
Msa0061500	Msa0646240	0.807603	4.663428e-50	-8.615850e-47
Msa0078120	Msa0646240	0.811968	5.369381e-51	-8.615850e-47
Msa0105410	Msa0646240	0.845271	4.506378e-59	-8.615850e-47
Msa0106710	Msa0646240	0.800070	1.712311e-48	-8.615850e-47
Msa0605370	Msa0646240	0.880642	4.638643e-70	-8.615850e-47
Msa0613340	Msa0646240	0.811510	6.752213e-51	-8.615850e-47
Msa0632650	Msa0646240	0.812415	4.289659e-51	-8.615850e-47
Msa0635270	Msa0646240	0.803720	3.046951e-49	-8.615850e-47
Msa0641130	Msa0646240	0.813207	2.876480e-51	-8.615850e-47
Msa0646240	Msa0686000	0.886983	2.126519e-72	-8.615850e-47
Msa0646240	Msa0702720	0.817487	3.215144e-52	-8.615850e-47
Msa0646240	Msa0708310	0.817237	3.659909e-52	-8.615850e-47
Msa0646240	Msa0711150	0.811907	5.536708e-51	-8.615850e-47
Msa0646240	Msa0743870	0.805209	1.491098e-49	-8.615850e-47
Msa0646240	Msa0752600	0.838294	3.131759e-57	-8.615850e-47
Msa0646240	Msa0870510	0.839344	1.675713e-57	-8.615850e-47
Msa0646240	Msa0881720	0.800970	1.122252e-48	-8.615850e-47
Msa0646240	Msa0945130	0.803093	4.109090e-49	-8.615850e-47
Msa0646240	Msa0965290	0.800597	1.337671e-48	-8.615850e-47
Msa0646240	Msa0999680	0.803859	2.851099e-49	-8.615850e-47
Msa0646240	Msa1012710	0.838216	3.281352e-57	-8.615850e-47
Msa0646240	Msa1012800	0.820074	8.313707e-53	-8.615850e-47
Msa0646240	Msa1026480	0.812750	3.622720e-51	-8.615850e-47
Msa0646240	Msa1030810	0.827172	1.811270e-54	-8.615850e-47
Msa0646240	Msa1034450	0.810896	9.177016e-51	-8.615850e-47
Msa0646240	Msa1068600	0.811213	7.832649e-51	-8.615850e-47
Msa0646240	Msa1069890	0.842338	2.748901e-58	-8.615850e-47
Msa0646240	Msa1074200	0.812550	4.007259e-51	-8.615850e-47
Msa0646240	Msa1094410	0.813989	1.935856e-51	-8.615850e-47
Msa0646240	Msa1119920	0.808531	2.959323e-50	-8.615850e-47
Msa0646240	Msa1129330	0.816834	4.507678e-52	-8.615850e-47
Msa0646240	Msa1132470	0.817199	3.732561e-52	-8.615850e-47
Msa0646240	Msa1184690	0.803517	3.357619e-49	-8.615850e-47
Msa0646240	Msa1212050	0.822231	2.645367e-53	-8.615850e-47
Msa0646240	Msa1212130	0.816001	6.923608e-52	-8.615850e-47
Msa0646240	Msa1238600	0.859685	3.485372e-63	-8.615850e-47
Msa0646240	Msa1238660	0.832476	9.248615e-56	-8.615850e-47
Msa0646240	Msa1256060	0.801755	7.751222e-49	-8.615850e-47
Msa0646240	Msa1260680	0.817229	3.675770e-52	-8.615850e-47
Msa0646240	Msa1270050	0.803039	4.215946e-49	-8.615850e-47
Msa0646240	Msa1271130	0.800102	1.687245e-48	-8.615850e-47
Msa0646240	Msa1319560	0.846100	2.684448e-59	-8.615850e-47
Msa0646240	Msa1341840	0.829116	6.162455e-55	-8.615850e-47
Msa0646240	Msa1353890	0.816604	5.076853e-52	-8.615850e-47
Msa0646240	Msa1380220	0.823089	1.670840e-53	-8.615850e-47
Msa0646240	Msa1386890	0.818961	1.491146e-52	-8.615850e-47
Msa0646240	Msa1428900	0.810747	9.885222e-51	-8.615850e-47
Msa0646240	Msa1442920	0.824847	6.466017e-54	-8.615850e-47
Msa0646240	Msa1458680	0.800937	1.140021e-48	-8.615850e-47
Msa0646240	Msa1461370	0.818720	1.691346e-52	-8.615850e-47
Msa0190930	Msa0646240	0.801958	7.041889e-49	-8.615850e-47
Msa0217060	Msa0646240	0.806081	9.781714e-50	-8.615850e-47
Msa0389210	Msa0646240	0.814054	1.872527e-51	-8.615850e-47
Msa0432160	Msa0646240	0.816004	6.915234e-52	-8.615850e-47
Msa0470880	Msa0646240	0.803630	3.180930e-49	-8.615850e-47
Msa0476680	Msa0646240	0.819072	1.407155e-52	-8.615850e-47
Msa0481630	Msa0646240	0.806875	6.652895e-50	-8.615850e-47
Msa0267790	Msa0646240	0.807436	5.060024e-50	-8.615850e-47
Msa0287870	Msa0646240	0.804651	1.950588e-49	-8.615850e-47
Msa0484800	Msa0646240	0.828108	1.079945e-54	-8.615850e-47
Msa0521010	Msa0646240	0.822310	2.536124e-53	-8.615850e-47
Msa0545050	Msa0646240	0.809479	1.853891e-50	-8.615850e-47
Msa0549890	Msa0646240	0.851701	7.476166e-61	-8.615850e-47
Msa0574600	Msa0646240	0.806234	9.081693e-50	-8.615850e-47
Msa0590390	Msa0646240	0.818230	2.185191e-52	-8.615850e-47
Msa0600590	Msa0646240	0.805347	1.394641e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0646240	MtrunA17_Chr4g0034601	94.574	258	8	1	1	258	1	252	1.78e-180	495
Msa0646240	MtrunA17_Chr5g0403681	65.759	257	81	2	1	256	1	251	7.13e-121	345
Msa0646240	MtrunA17_Chr2g0318961	68.687	198	61	1	57	254	3	199	1.90e-94	276
Msa0646240	MtrunA17_Chr8g0361451	68.182	198	62	1	57	254	3	199	5.07e-94	275
Msa0646240	MtrunA17_Chr5g0429671	64.975	197	69	0	58	254	5	201	5.81e-93	272
Msa0646240	MtrunA17_Chr4g0048841	65.128	195	67	1	60	254	41	234	3.87e-87	259
Msa0646240	MtrunA17_Chr2g0280641	60.914	197	76	1	58	254	4	199	1.63e-81	243
Msa0646240	MtrunA17_Chr8g0361461	69.565	115	35	0	140	254	2	116	5.74e-52	165
Msa0646240	MtrunA17_Chr4g0048831	66.087	115	35	1	140	254	2	112	1.21e-49	159

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0646240	AT4G36750.1	65.809	272	77	1	1	256	1	272	4.76e-123	351
Msa0646240	AT4G27270.1	68.020	197	62	1	58	254	4	199	2.79e-95	278
Msa0646240	AT5G54500.1	68.020	197	62	1	58	254	4	199	1.59e-93	274
Msa0646240	AT4G27270.3	67.196	189	61	1	66	254	1	188	1.69e-89	263
Msa0646240	AT4G27270.2	67.196	189	61	1	66	254	1	188	1.69e-89	263
Msa0646240	AT5G58800.1	57.711	201	85	0	58	258	5	205	2.08e-84	251
Msa0646240	AT5G58800.2	57.711	201	85	0	58	258	5	205	2.08e-84	251
Msa0646240	AT4G27270.4	69.799	149	44	1	106	254	1	148	5.47e-72	218
Msa0646240	AT5G54500.2	66.250	160	53	1	58	217	4	162	1.00e-71	220

Find 79 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCAATTGGTCAACTATATTT+TGG	0.158333	4_3:-51884616	None:intergenic
CCTTGTCATTCATTCTCTTC+TGG	0.158992	4_3:+51886628	Msa0646240:three_prime_UTR
TTTGATCTCTGCTGAGAATT+TGG	0.169718	4_3:+51885001	Msa0646240:CDS
TGGATTTATGAAGGTTAATT+TGG	0.174148	4_3:-51884455	None:intergenic
GAGGCTGATGGGTTGTTGTT+TGG	0.212633	4_3:+51885026	Msa0646240:CDS
GTTCCTATTGGATATACTTT+TGG	0.228007	4_3:+51886334	Msa0646240:CDS
AGGCTGATGGGTTGTTGTTT+GGG	0.238388	4_3:+51885027	Msa0646240:CDS
TCCGACGAGGTTTGGTAGTA+TGG	0.239808	4_3:+51885052	Msa0646240:CDS
CCTCTTACGCTGTAGTTTCT+TGG	0.264262	4_3:-51885184	None:intergenic
TGTATTTCATGGGAGTTAAT+TGG	0.277092	4_3:+51886726	Msa0646240:three_prime_UTR
AAGCTTGCTGGTGTTCCTGC+TGG	0.298841	4_3:+51885128	Msa0646240:CDS
TATGACTCAGATGTATTTCA+TGG	0.333977	4_3:+51886715	Msa0646240:three_prime_UTR
AAAGGGGTTGATTCTGTTGA+TGG	0.375228	4_3:+51884888	Msa0646240:CDS
TTTGAAATGGACTCAATTAG+AGG	0.383271	4_3:+51886367	Msa0646240:CDS
TTGATATTTCAAAATTTCAA+TGG	0.384573	4_3:+51884635	Msa0646240:exon
AATCTTGTTGTGTTTATTGT+TGG	0.385444	4_3:+51886579	Msa0646240:three_prime_UTR
GGAATGCTCTATGTTCCTAT+TGG	0.388744	4_3:+51886322	Msa0646240:CDS
TGATATTTCAAAATTTCAAT+GGG	0.396895	4_3:+51884636	Msa0646240:exon
AGCTTGCTGGTGTTCCTGCT+GGG	0.399729	4_3:+51885129	Msa0646240:CDS
AACAAATGTTGGATTTATGA+AGG	0.414289	4_3:-51884464	None:intergenic
GGTTCATTCTCTTCTGTAGT+TGG	0.415195	4_3:-51884696	None:intergenic
ATTAGTTCCAACACTTCCTT+TGG	0.423053	4_3:-51884948	None:intergenic
CTTGTTGTGTTTATTGTTGG+TGG	0.423271	4_3:+51886582	Msa0646240:three_prime_UTR
TTTGGGTTTCCGACGAGGTT+TGG	0.429899	4_3:+51885044	Msa0646240:CDS
GATCTCTGCTGAGAATTTGG+TGG	0.432973	4_3:+51885004	Msa0646240:CDS
TGGTGCTGGAATGTTTGAAA+TGG	0.434829	4_3:+51886354	Msa0646240:CDS
GCTAATATAGTCAAGAAGTT+AGG	0.438947	4_3:+51886487	Msa0646240:CDS
GCACCAAAAGTATATCCAAT+AGG	0.439235	4_3:-51886337	None:intergenic
GAGAATTTGGTGGAGGCTGA+TGG	0.442575	4_3:+51885014	Msa0646240:CDS
TGGAAGGAACAGAAGCTTGC+TGG	0.451653	4_3:+51885116	Msa0646240:CDS
GATTCTGTTGATGGAGTTGA+AGG	0.452417	4_3:+51884897	Msa0646240:CDS
CAATGCAACGTGAAGGTGCT+TGG	0.454677	4_3:-51884350	None:intergenic
GCATAGGTTCCAGCACCATA+TGG	0.464417	4_3:-51886397	None:intergenic
TATTGTTGGTGGTATGAGAT+TGG	0.475922	4_3:+51886593	Msa0646240:three_prime_UTR
TAGTATGGCGGCACAGATGA+AGG	0.480751	4_3:+51885067	Msa0646240:CDS
GGAACCTCATCATCTTTCTC+AGG	0.484933	4_3:-51884978	None:intergenic
TTTGTTAGTACTGGTACTCA+AGG	0.489722	4_3:+51885155	Msa0646240:CDS
ATTTCAATGGGGAAAGGAAG+AGG	0.491973	4_3:+51884648	Msa0646240:exon
TCGATTCCACGGGGCAGTTG+TGG	0.493726	4_3:+51885096	Msa0646240:CDS
CTCTGCTGAGAATTTGGTGG+AGG	0.499876	4_3:+51885007	Msa0646240:CDS
TTCAAAATTTCAATGGGGAA+AGG	0.501971	4_3:+51884642	Msa0646240:exon
TATGGTGCTGGAACCTATGC+AGG	0.505168	4_3:+51886400	Msa0646240:CDS
GTATGGTCATGTGGAATCAT+TGG	0.514794	4_3:+51884851	Msa0646240:CDS
ATTAGAGGTGGATCTCCATA+TGG	0.519166	4_3:+51886382	Msa0646240:CDS
AGAATTTGGTGGAGGCTGAT+GGG	0.527716	4_3:+51885015	Msa0646240:CDS
ACAGGCAACTGAAGCTGAGT+TGG	0.528852	4_3:+51886435	Msa0646240:CDS
TCTTGAACCATCTCCTGCAT+AGG	0.535877	4_3:-51886413	None:intergenic
GGTGGATCTCCATATGGTGC+TGG	0.541319	4_3:+51886388	Msa0646240:CDS
TGCAGGAGATGGTTCAAGAC+AGG	0.542828	4_3:+51886417	Msa0646240:CDS
GACGCTGCCAAAGGAAGTGT+TGG	0.543102	4_3:+51884941	Msa0646240:CDS
TGTCATTCATTCTCTTCTGG+AGG	0.544657	4_3:+51886631	Msa0646240:three_prime_UTR
TTGGCACTTGCTGAGTATCA+AGG	0.548471	4_3:+51886454	Msa0646240:CDS
ATGACTCAGATGTATTTCAT+GGG	0.554756	4_3:+51886716	Msa0646240:three_prime_UTR
TTATTCAATGTATGGTCATG+TGG	0.560406	4_3:+51884842	Msa0646240:CDS
GTTGGTGGTATGAGATTGGT+AGG	0.562952	4_3:+51886597	Msa0646240:three_prime_UTR
AAGACAGAGAGGTGGGTGGG+TGG	0.571460	4_3:-51884377	None:intergenic
GTTAGTACTGGTACTCAAGG+TGG	0.582457	4_3:+51885158	Msa0646240:CDS
ATTCTGTTGATGGAGTTGAA+GGG	0.590324	4_3:+51884898	Msa0646240:CDS
TTCCACGGGGCAGTTGTGGA+AGG	0.595264	4_3:+51885100	Msa0646240:CDS
TGTTGTTTGGGTTTCCGACG+AGG	0.600440	4_3:+51885039	Msa0646240:CDS
GAAATGGACTCAATTAGAGG+TGG	0.608938	4_3:+51886370	Msa0646240:CDS
AGTACTGGTACTCAAGGTGG+TGG	0.615053	4_3:+51885161	Msa0646240:CDS
AGTATGGCGGCACAGATGAA+GGG	0.615125	4_3:+51885068	Msa0646240:CDS
AAATTCTCAGCAGAGATCAA+AGG	0.615192	4_3:-51884999	None:intergenic
TGTCGTAGAGACGCTGCCAA+AGG	0.620906	4_3:+51884932	Msa0646240:CDS
TTCCTTCCACAACTGCCCCG+TGG	0.623823	4_3:-51885102	None:intergenic
CCAGAAGAGAATGAATGACA+AGG	0.626258	4_3:-51886628	None:intergenic
AGATGTAGCAACAATAGATG+TGG	0.630772	4_3:+51884770	Msa0646240:CDS
AGCACCTGAGAAAGATGATG+AGG	0.634435	4_3:+51884974	Msa0646240:CDS
GCTGGAACCTATGCAGGAGA+TGG	0.635685	4_3:+51886406	Msa0646240:CDS
TGAGTATCAAGGTAGATACA+TGG	0.641955	4_3:+51886465	Msa0646240:CDS
TAGGAACATAGAGCATTCCA+TGG	0.644524	4_3:-51886318	None:intergenic
GCCATACTACCAAACCTCGT+CGG	0.662442	4_3:-51885053	None:intergenic
GATATTTCAAAATTTCAATG+GGG	0.665834	4_3:+51884637	Msa0646240:exon
GACGAGGTTTGGTAGTATGG+CGG	0.666692	4_3:+51885055	Msa0646240:CDS
ATAACACAATTAGTCCACCA+TGG	0.694726	4_3:+51886301	Msa0646240:CDS
TGGAAAACAATGCAACGTGA+AGG	0.695980	4_3:-51884357	None:intergenic
GAACATAGAGCATTCCATGG+TGG	0.721594	4_3:-51886315	None:intergenic
TTGGCAGCGTCTCTACGACA+CGG	0.741183	4_3:-51884929	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TGAAATTTTGAAATATCAAT+TGG	-	chr4_3:51884634-51884653	None:intergenic	15.0%
!!	TTGATATTTCAAAATTTCAA+TGG	+	chr4_3:51884635-51884654	Msa0646240:exon	15.0%
!!	TGATATTTCAAAATTTCAAT+GGG	+	chr4_3:51884636-51884655	Msa0646240:exon	15.0%
!!!	ATTGTTTTTTATTCAATGTA+TGG	+	chr4_3:51884834-51884853	Msa0646240:CDS	15.0%
!!	AAGAAAACTATAAAAACTTT+AGG	-	chr4_3:51885230-51885249	None:intergenic	15.0%
!!!	TGAAATTTTGAAATATCAAT+TGG	-	chr4_3:51884634-51884653	None:intergenic	15.0%
!!	TTGATATTTCAAAATTTCAA+TGG	+	chr4_3:51884635-51884654	Msa0646240:exon	15.0%
!!	TGATATTTCAAAATTTCAAT+GGG	+	chr4_3:51884636-51884655	Msa0646240:exon	15.0%
!!!	ATTGTTTTTTATTCAATGTA+TGG	+	chr4_3:51884834-51884853	Msa0646240:CDS	15.0%
!!	AAGAAAACTATAAAAACTTT+AGG	-	chr4_3:51885230-51885249	None:intergenic	15.0%
!!!	TGTGATTAAATTTTGTGTAA+TGG	-	chr4_3:51884431-51884450	None:intergenic	20.0%
!!	GTGTATTAAAAAACAAATGT+TGG	-	chr4_3:51884478-51884497	None:intergenic	20.0%
!!	GATATTTCAAAATTTCAATG+GGG	+	chr4_3:51884637-51884656	Msa0646240:exon	20.0%
!!!	TTGTTTCATTTTGTTGAATT+TGG	-	chr4_3:51884737-51884756	None:intergenic	20.0%
!!!	AGAACAACTTTTTCAATTTT+GGG	-	chr4_3:51885298-51885317	None:intergenic	20.0%
!!!	TAGAACAACTTTTTCAATTT+TGG	-	chr4_3:51885299-51885318	None:intergenic	20.0%
!!!	AATTTTTTGTTGTTAGTTGA+AGG	-	chr4_3:51885487-51885506	None:intergenic	20.0%
!!!	TTGTTATTAATCAAATGTTG+TGG	+	chr4_3:51885505-51885524	Msa0646240:intron	20.0%
!!	CAAAATATTCTTTATTCTGT+TGG	+	chr4_3:51885972-51885991	Msa0646240:intron	20.0%
!!	TGAAGGAACTAAATTAATTT+GGG	+	chr4_3:51886095-51886114	Msa0646240:intron	20.0%
!!!	CAATAGAGGATTTAATTTAT+AGG	+	chr4_3:51886160-51886179	Msa0646240:intron	20.0%
!!!	TGTGATTAAATTTTGTGTAA+TGG	-	chr4_3:51884431-51884450	None:intergenic	20.0%
!!	GTGTATTAAAAAACAAATGT+TGG	-	chr4_3:51884478-51884497	None:intergenic	20.0%
!!	GATATTTCAAAATTTCAATG+GGG	+	chr4_3:51884637-51884656	Msa0646240:exon	20.0%
!!!	TTGTTTCATTTTGTTGAATT+TGG	-	chr4_3:51884737-51884756	None:intergenic	20.0%
!!!	AGAACAACTTTTTCAATTTT+GGG	-	chr4_3:51885298-51885317	None:intergenic	20.0%
!!!	TAGAACAACTTTTTCAATTT+TGG	-	chr4_3:51885299-51885318	None:intergenic	20.0%
!!!	AATTTTTTGTTGTTAGTTGA+AGG	-	chr4_3:51885487-51885506	None:intergenic	20.0%
!!!	TTGTTATTAATCAAATGTTG+TGG	+	chr4_3:51885505-51885524	Msa0646240:intron	20.0%
!!	CAAAATATTCTTTATTCTGT+TGG	+	chr4_3:51885972-51885991	Msa0646240:intron	20.0%
!!	TGAAGGAACTAAATTAATTT+GGG	+	chr4_3:51886095-51886114	Msa0646240:intron	20.0%
!!!	CAATAGAGGATTTAATTTAT+AGG	+	chr4_3:51886160-51886179	Msa0646240:intron	20.0%
!	ATGACAAAAAGAAAGAGAAA+AGG	-	chr4_3:51884406-51884425	None:intergenic	25.0%
!	TGGATTTATGAAGGTTAATT+TGG	-	chr4_3:51884458-51884477	None:intergenic	25.0%
!	AACAAATGTTGGATTTATGA+AGG	-	chr4_3:51884467-51884486	None:intergenic	25.0%
!!	TCAATTGGTCAACTATATTT+TGG	-	chr4_3:51884619-51884638	None:intergenic	25.0%
!	ATCTGTTATTACTAGTGATA+AGG	+	chr4_3:51885397-51885416	Msa0646240:intron	25.0%
!!!	TAAAAAGCTTTTAGGTATCT+CGG	-	chr4_3:51885787-51885806	None:intergenic	25.0%
!!	ATCACACTTAAAAAGCTTTT+AGG	-	chr4_3:51885795-51885814	None:intergenic	25.0%
!	GGAAATAACAAGTAATTACA+AGG	-	chr4_3:51885930-51885949	None:intergenic	25.0%
!	CTGAAGGAACTAAATTAATT+TGG	+	chr4_3:51886094-51886113	Msa0646240:intron	25.0%
!	AATTTCTATTGTAATGTAGC+TGG	+	chr4_3:51886272-51886291	Msa0646240:intron	25.0%
!!	AATCTTGTTGTGTTTATTGT+TGG	+	chr4_3:51886579-51886598	Msa0646240:three_prime_UTR	25.0%
!	ATGACAAAAAGAAAGAGAAA+AGG	-	chr4_3:51884406-51884425	None:intergenic	25.0%
!	TGGATTTATGAAGGTTAATT+TGG	-	chr4_3:51884458-51884477	None:intergenic	25.0%
!	AACAAATGTTGGATTTATGA+AGG	-	chr4_3:51884467-51884486	None:intergenic	25.0%
!!	TCAATTGGTCAACTATATTT+TGG	-	chr4_3:51884619-51884638	None:intergenic	25.0%
!	ATCTGTTATTACTAGTGATA+AGG	+	chr4_3:51885397-51885416	Msa0646240:intron	25.0%
!!!	TAAAAAGCTTTTAGGTATCT+CGG	-	chr4_3:51885787-51885806	None:intergenic	25.0%
!!	ATCACACTTAAAAAGCTTTT+AGG	-	chr4_3:51885795-51885814	None:intergenic	25.0%
!	GGAAATAACAAGTAATTACA+AGG	-	chr4_3:51885930-51885949	None:intergenic	25.0%
!	CTGAAGGAACTAAATTAATT+TGG	+	chr4_3:51886094-51886113	Msa0646240:intron	25.0%
!	AATTTCTATTGTAATGTAGC+TGG	+	chr4_3:51886272-51886291	Msa0646240:intron	25.0%
!!	AATCTTGTTGTGTTTATTGT+TGG	+	chr4_3:51886579-51886598	Msa0646240:three_prime_UTR	25.0%
	TTCAAAATTTCAATGGGGAA+AGG	+	chr4_3:51884642-51884661	Msa0646240:exon	30.0%
!!!	ATTTGGTTTTCAACACTAAG+AGG	-	chr4_3:51884720-51884739	None:intergenic	30.0%
	TTATTCAATGTATGGTCATG+TGG	+	chr4_3:51884842-51884861	Msa0646240:CDS	30.0%
	TTGGCAAGATCATTGAAAAA+AGG	+	chr4_3:51884870-51884889	Msa0646240:CDS	30.0%
	TGGCAAGATCATTGAAAAAA+GGG	+	chr4_3:51884871-51884890	Msa0646240:CDS	30.0%
	TTACTAGTGATAAGGTGATT+TGG	+	chr4_3:51885405-51885424	Msa0646240:intron	30.0%
	ATATAGAAGTAGGAGTGATA+AGG	+	chr4_3:51885444-51885463	Msa0646240:intron	30.0%
!	TGTTAAGATCCATTGCTATT+AGG	-	chr4_3:51885628-51885647	None:intergenic	30.0%
	ATAATTCTCACTTCACATGT+CGG	-	chr4_3:51885706-51885725	None:intergenic	30.0%
	TGTGATTTAACCTCAACTTT+AGG	+	chr4_3:51885809-51885828	Msa0646240:intron	30.0%
!!	TTGTTATTTCCGCTTAAAAG+TGG	+	chr4_3:51885939-51885958	Msa0646240:intron	30.0%
!!	AACAAGTTTCCACTTTTAAG+CGG	-	chr4_3:51885951-51885970	None:intergenic	30.0%
!	AACTAAATTAATTTGGGCGT+GGG	+	chr4_3:51886101-51886120	Msa0646240:intron	30.0%
!!!	GTATGATTGAAGGACTTTTT+TGG	+	chr4_3:51886136-51886155	Msa0646240:intron	30.0%
!	GTTCCTATTGGATATACTTT+TGG	+	chr4_3:51886334-51886353	Msa0646240:CDS	30.0%
!	TTTGAAATGGACTCAATTAG+AGG	+	chr4_3:51886367-51886386	Msa0646240:CDS	30.0%
	GCTAATATAGTCAAGAAGTT+AGG	+	chr4_3:51886487-51886506	Msa0646240:CDS	30.0%
	TATGACTCAGATGTATTTCA+TGG	+	chr4_3:51886715-51886734	Msa0646240:three_prime_UTR	30.0%
	ATGACTCAGATGTATTTCAT+GGG	+	chr4_3:51886716-51886735	Msa0646240:three_prime_UTR	30.0%
	TGTATTTCATGGGAGTTAAT+TGG	+	chr4_3:51886726-51886745	Msa0646240:three_prime_UTR	30.0%
	TTCAAAATTTCAATGGGGAA+AGG	+	chr4_3:51884642-51884661	Msa0646240:exon	30.0%
!!!	ATTTGGTTTTCAACACTAAG+AGG	-	chr4_3:51884720-51884739	None:intergenic	30.0%
	TTATTCAATGTATGGTCATG+TGG	+	chr4_3:51884842-51884861	Msa0646240:CDS	30.0%
	TTGGCAAGATCATTGAAAAA+AGG	+	chr4_3:51884870-51884889	Msa0646240:CDS	30.0%
	TGGCAAGATCATTGAAAAAA+GGG	+	chr4_3:51884871-51884890	Msa0646240:CDS	30.0%
	TTACTAGTGATAAGGTGATT+TGG	+	chr4_3:51885405-51885424	Msa0646240:intron	30.0%
	ATATAGAAGTAGGAGTGATA+AGG	+	chr4_3:51885444-51885463	Msa0646240:intron	30.0%
!	TGTTAAGATCCATTGCTATT+AGG	-	chr4_3:51885628-51885647	None:intergenic	30.0%
	ATAATTCTCACTTCACATGT+CGG	-	chr4_3:51885706-51885725	None:intergenic	30.0%
	TGTGATTTAACCTCAACTTT+AGG	+	chr4_3:51885809-51885828	Msa0646240:intron	30.0%
!!	TTGTTATTTCCGCTTAAAAG+TGG	+	chr4_3:51885939-51885958	Msa0646240:intron	30.0%
!!	AACAAGTTTCCACTTTTAAG+CGG	-	chr4_3:51885951-51885970	None:intergenic	30.0%
!	AACTAAATTAATTTGGGCGT+GGG	+	chr4_3:51886101-51886120	Msa0646240:intron	30.0%
!!!	GTATGATTGAAGGACTTTTT+TGG	+	chr4_3:51886136-51886155	Msa0646240:intron	30.0%
!	GTTCCTATTGGATATACTTT+TGG	+	chr4_3:51886334-51886353	Msa0646240:CDS	30.0%
!	TTTGAAATGGACTCAATTAG+AGG	+	chr4_3:51886367-51886386	Msa0646240:CDS	30.0%
	GCTAATATAGTCAAGAAGTT+AGG	+	chr4_3:51886487-51886506	Msa0646240:CDS	30.0%
	TATGACTCAGATGTATTTCA+TGG	+	chr4_3:51886715-51886734	Msa0646240:three_prime_UTR	30.0%
	ATGACTCAGATGTATTTCAT+GGG	+	chr4_3:51886716-51886735	Msa0646240:three_prime_UTR	30.0%
	TGTATTTCATGGGAGTTAAT+TGG	+	chr4_3:51886726-51886745	Msa0646240:three_prime_UTR	30.0%
	AGAAAAGGAAAAAGACAGAG+AGG	-	chr4_3:51884391-51884410	None:intergenic	35.0%
	AGATGTAGCAACAATAGATG+TGG	+	chr4_3:51884770-51884789	Msa0646240:CDS	35.0%
	GGCAAGATCATTGAAAAAAG+GGG	+	chr4_3:51884872-51884891	Msa0646240:CDS	35.0%
!	ATTCTGTTGATGGAGTTGAA+GGG	+	chr4_3:51884898-51884917	Msa0646240:CDS	35.0%
	ATTAGTTCCAACACTTCCTT+TGG	-	chr4_3:51884951-51884970	None:intergenic	35.0%
	AAATTCTCAGCAGAGATCAA+AGG	-	chr4_3:51885002-51885021	None:intergenic	35.0%
	TTTGATCTCTGCTGAGAATT+TGG	+	chr4_3:51885001-51885020	Msa0646240:CDS	35.0%
!!	TTTGTTAGTACTGGTACTCA+AGG	+	chr4_3:51885155-51885174	Msa0646240:CDS	35.0%
	TTAGGTTTCCGATTTCTTCT+AGG	-	chr4_3:51885610-51885629	None:intergenic	35.0%
	AATCGGAAACCTAATAGCAA+TGG	+	chr4_3:51885616-51885635	Msa0646240:intron	35.0%
!	CACAATCACGATTTCTAAGA+TGG	-	chr4_3:51885663-51885682	None:intergenic	35.0%
!	TGAACATGTGTTTCTAAGTG+AGG	-	chr4_3:51885729-51885748	None:intergenic	35.0%
	GTCTCACATCAGATAAAAGA+TGG	-	chr4_3:51885754-51885773	None:intergenic	35.0%
	TGACACTAATCCTAAAGTTG+AGG	-	chr4_3:51885822-51885841	None:intergenic	35.0%
!!	CAACTTTAGGATTAGTGTCA+TGG	+	chr4_3:51885822-51885841	Msa0646240:intron	35.0%
	ACCTAAGTATTCCTCAACTT+TGG	-	chr4_3:51885861-51885880	None:intergenic	35.0%
	TCATGCCAACCAAATATTTG+TGG	+	chr4_3:51886069-51886088	Msa0646240:intron	35.0%
!	GAACTAAATTAATTTGGGCG+TGG	+	chr4_3:51886100-51886119	Msa0646240:intron	35.0%
!	ACTAAATTAATTTGGGCGTG+GGG	+	chr4_3:51886102-51886121	Msa0646240:intron	35.0%
!!!	AGGACTTTTTTGGACAATAG+AGG	+	chr4_3:51886146-51886165	Msa0646240:intron	35.0%
!!	CATAATGATTAACTGGCTTG+TGG	-	chr4_3:51886193-51886212	None:intergenic	35.0%
	CAAGCCAGTTAATCATTATG+TGG	+	chr4_3:51886193-51886212	Msa0646240:intron	35.0%
	CCTACCACATAATGATTAAC+TGG	-	chr4_3:51886200-51886219	None:intergenic	35.0%
	CCAGTTAATCATTATGTGGT+AGG	+	chr4_3:51886197-51886216	Msa0646240:intron	35.0%
	ATAACACAATTAGTCCACCA+TGG	+	chr4_3:51886301-51886320	Msa0646240:CDS	35.0%
!	GCACCAAAAGTATATCCAAT+AGG	-	chr4_3:51886340-51886359	None:intergenic	35.0%
!!	ATTGGATATACTTTTGGTGC+TGG	+	chr4_3:51886340-51886359	Msa0646240:CDS	35.0%
	TGAGTATCAAGGTAGATACA+TGG	+	chr4_3:51886465-51886484	Msa0646240:CDS	35.0%
!!!	TCAAGAGAAACTAGCTTTTC+TGG	-	chr4_3:51886513-51886532	None:intergenic	35.0%
!	CTTGTTGTGTTTATTGTTGG+TGG	+	chr4_3:51886582-51886601	Msa0646240:three_prime_UTR	35.0%
!!	TATTGTTGGTGGTATGAGAT+TGG	+	chr4_3:51886593-51886612	Msa0646240:three_prime_UTR	35.0%
	AGAAAAGGAAAAAGACAGAG+AGG	-	chr4_3:51884391-51884410	None:intergenic	35.0%
	AGATGTAGCAACAATAGATG+TGG	+	chr4_3:51884770-51884789	Msa0646240:CDS	35.0%
	GGCAAGATCATTGAAAAAAG+GGG	+	chr4_3:51884872-51884891	Msa0646240:CDS	35.0%
!	ATTCTGTTGATGGAGTTGAA+GGG	+	chr4_3:51884898-51884917	Msa0646240:CDS	35.0%
	ATTAGTTCCAACACTTCCTT+TGG	-	chr4_3:51884951-51884970	None:intergenic	35.0%
	AAATTCTCAGCAGAGATCAA+AGG	-	chr4_3:51885002-51885021	None:intergenic	35.0%
	TTTGATCTCTGCTGAGAATT+TGG	+	chr4_3:51885001-51885020	Msa0646240:CDS	35.0%
!!	TTTGTTAGTACTGGTACTCA+AGG	+	chr4_3:51885155-51885174	Msa0646240:CDS	35.0%
	TTAGGTTTCCGATTTCTTCT+AGG	-	chr4_3:51885610-51885629	None:intergenic	35.0%
	AATCGGAAACCTAATAGCAA+TGG	+	chr4_3:51885616-51885635	Msa0646240:intron	35.0%
!	CACAATCACGATTTCTAAGA+TGG	-	chr4_3:51885663-51885682	None:intergenic	35.0%
!	TGAACATGTGTTTCTAAGTG+AGG	-	chr4_3:51885729-51885748	None:intergenic	35.0%
	GTCTCACATCAGATAAAAGA+TGG	-	chr4_3:51885754-51885773	None:intergenic	35.0%
	TGACACTAATCCTAAAGTTG+AGG	-	chr4_3:51885822-51885841	None:intergenic	35.0%
!!	CAACTTTAGGATTAGTGTCA+TGG	+	chr4_3:51885822-51885841	Msa0646240:intron	35.0%
	ACCTAAGTATTCCTCAACTT+TGG	-	chr4_3:51885861-51885880	None:intergenic	35.0%
	TCATGCCAACCAAATATTTG+TGG	+	chr4_3:51886069-51886088	Msa0646240:intron	35.0%
!	GAACTAAATTAATTTGGGCG+TGG	+	chr4_3:51886100-51886119	Msa0646240:intron	35.0%
!	ACTAAATTAATTTGGGCGTG+GGG	+	chr4_3:51886102-51886121	Msa0646240:intron	35.0%
!!!	AGGACTTTTTTGGACAATAG+AGG	+	chr4_3:51886146-51886165	Msa0646240:intron	35.0%
!!	CATAATGATTAACTGGCTTG+TGG	-	chr4_3:51886193-51886212	None:intergenic	35.0%
	CAAGCCAGTTAATCATTATG+TGG	+	chr4_3:51886193-51886212	Msa0646240:intron	35.0%
	CCTACCACATAATGATTAAC+TGG	-	chr4_3:51886200-51886219	None:intergenic	35.0%
	CCAGTTAATCATTATGTGGT+AGG	+	chr4_3:51886197-51886216	Msa0646240:intron	35.0%
	ATAACACAATTAGTCCACCA+TGG	+	chr4_3:51886301-51886320	Msa0646240:CDS	35.0%
!	GCACCAAAAGTATATCCAAT+AGG	-	chr4_3:51886340-51886359	None:intergenic	35.0%
!!	ATTGGATATACTTTTGGTGC+TGG	+	chr4_3:51886340-51886359	Msa0646240:CDS	35.0%
	TGAGTATCAAGGTAGATACA+TGG	+	chr4_3:51886465-51886484	Msa0646240:CDS	35.0%
!!!	TCAAGAGAAACTAGCTTTTC+TGG	-	chr4_3:51886513-51886532	None:intergenic	35.0%
!	CTTGTTGTGTTTATTGTTGG+TGG	+	chr4_3:51886582-51886601	Msa0646240:three_prime_UTR	35.0%
!!	TATTGTTGGTGGTATGAGAT+TGG	+	chr4_3:51886593-51886612	Msa0646240:three_prime_UTR	35.0%
	TGGAAAACAATGCAACGTGA+AGG	-	chr4_3:51884360-51884379	None:intergenic	40.0%
	AAGGAAAAAGACAGAGAGGT+GGG	-	chr4_3:51884387-51884406	None:intergenic	40.0%
	AAAGGAAAAAGACAGAGAGG+TGG	-	chr4_3:51884388-51884407	None:intergenic	40.0%
	ATTTCAATGGGGAAAGGAAG+AGG	+	chr4_3:51884648-51884667	Msa0646240:exon	40.0%
!!!	GTTGGTGCTTTTTTCTTGCT+TGG	-	chr4_3:51884681-51884700	None:intergenic	40.0%
	GGTTCATTCTCTTCTGTAGT+TGG	-	chr4_3:51884699-51884718	None:intergenic	40.0%
	GTATGGTCATGTGGAATCAT+TGG	+	chr4_3:51884851-51884870	Msa0646240:CDS	40.0%
!	AAAGGGGTTGATTCTGTTGA+TGG	+	chr4_3:51884888-51884907	Msa0646240:CDS	40.0%
!	GATTCTGTTGATGGAGTTGA+AGG	+	chr4_3:51884897-51884916	Msa0646240:CDS	40.0%
	GTACTAACAAAAAACCCAGC+AGG	-	chr4_3:51885146-51885165	None:intergenic	40.0%
!!!	GCTGGGTTTTTTGTTAGTAC+TGG	+	chr4_3:51885146-51885165	Msa0646240:CDS	40.0%
	CAAGAAACTACAGCGTAAGA+GGG	+	chr4_3:51885185-51885204	Msa0646240:intron	40.0%
!!	AGGTGATTTGGTTGTTTGAG+AGG	+	chr4_3:51885417-51885436	Msa0646240:intron	40.0%
!!	TGATTTGGTTGTTTGAGAGG+AGG	+	chr4_3:51885420-51885439	Msa0646240:intron	40.0%
	GAGAGGAGGAATATAGAAGT+AGG	+	chr4_3:51885434-51885453	Msa0646240:intron	40.0%
	CTCAATCTGTCTTGTCAACT+GGG	-	chr4_3:51885531-51885550	None:intergenic	40.0%
	ACAAGACAGATTGAGCTTGT+GGG	+	chr4_3:51885536-51885555	Msa0646240:intron	40.0%
	CTCCACAAAACAAACATGAG+AGG	+	chr4_3:51885579-51885598	Msa0646240:intron	40.0%
!!!	CTCCTCTCATGTTTGTTTTG+TGG	-	chr4_3:51885584-51885603	None:intergenic	40.0%
	AGGAGCTTCCTAGAAGAAAT+CGG	+	chr4_3:51885599-51885618	Msa0646240:intron	40.0%
	AACTCAAAGAGCCAAAGTTG+AGG	+	chr4_3:51885847-51885866	Msa0646240:intron	40.0%
	GCCAAAGTTGAGGAATACTT+AGG	+	chr4_3:51885857-51885876	Msa0646240:intron	40.0%
	TACAATACCACATGTGCTTG+TGG	+	chr4_3:51886040-51886059	Msa0646240:intron	40.0%
	CAGTGCCACAAATATTTGGT+TGG	-	chr4_3:51886077-51886096	None:intergenic	40.0%
	CCTTCAGTGCCACAAATATT+TGG	-	chr4_3:51886081-51886100	None:intergenic	40.0%
!	CCAAATATTTGTGGCACTGA+AGG	+	chr4_3:51886078-51886097	Msa0646240:intron	40.0%
!	CAATGATGGGGTATGATTGA+AGG	+	chr4_3:51886126-51886145	Msa0646240:intron	40.0%
!	TAGGAACATAGAGCATTCCA+TGG	-	chr4_3:51886321-51886340	None:intergenic	40.0%
	GGAATGCTCTATGTTCCTAT+TGG	+	chr4_3:51886322-51886341	Msa0646240:CDS	40.0%
!	TGGTGCTGGAATGTTTGAAA+TGG	+	chr4_3:51886354-51886373	Msa0646240:CDS	40.0%
!	GAAATGGACTCAATTAGAGG+TGG	+	chr4_3:51886370-51886389	Msa0646240:CDS	40.0%
	ATTAGAGGTGGATCTCCATA+TGG	+	chr4_3:51886382-51886401	Msa0646240:CDS	40.0%
	CCAGAAGAGAATGAATGACA+AGG	-	chr4_3:51886631-51886650	None:intergenic	40.0%
	CCTTGTCATTCATTCTCTTC+TGG	+	chr4_3:51886628-51886647	Msa0646240:three_prime_UTR	40.0%
	TGTCATTCATTCTCTTCTGG+AGG	+	chr4_3:51886631-51886650	Msa0646240:three_prime_UTR	40.0%
	TGGAAAACAATGCAACGTGA+AGG	-	chr4_3:51884360-51884379	None:intergenic	40.0%
	AAGGAAAAAGACAGAGAGGT+GGG	-	chr4_3:51884387-51884406	None:intergenic	40.0%
	AAAGGAAAAAGACAGAGAGG+TGG	-	chr4_3:51884388-51884407	None:intergenic	40.0%
	ATTTCAATGGGGAAAGGAAG+AGG	+	chr4_3:51884648-51884667	Msa0646240:exon	40.0%
!!!	GTTGGTGCTTTTTTCTTGCT+TGG	-	chr4_3:51884681-51884700	None:intergenic	40.0%
	GGTTCATTCTCTTCTGTAGT+TGG	-	chr4_3:51884699-51884718	None:intergenic	40.0%
	GTATGGTCATGTGGAATCAT+TGG	+	chr4_3:51884851-51884870	Msa0646240:CDS	40.0%
!	AAAGGGGTTGATTCTGTTGA+TGG	+	chr4_3:51884888-51884907	Msa0646240:CDS	40.0%
!	GATTCTGTTGATGGAGTTGA+AGG	+	chr4_3:51884897-51884916	Msa0646240:CDS	40.0%
	GTACTAACAAAAAACCCAGC+AGG	-	chr4_3:51885146-51885165	None:intergenic	40.0%
!!!	GCTGGGTTTTTTGTTAGTAC+TGG	+	chr4_3:51885146-51885165	Msa0646240:CDS	40.0%
	CAAGAAACTACAGCGTAAGA+GGG	+	chr4_3:51885185-51885204	Msa0646240:intron	40.0%
!!	AGGTGATTTGGTTGTTTGAG+AGG	+	chr4_3:51885417-51885436	Msa0646240:intron	40.0%
!!	TGATTTGGTTGTTTGAGAGG+AGG	+	chr4_3:51885420-51885439	Msa0646240:intron	40.0%
	GAGAGGAGGAATATAGAAGT+AGG	+	chr4_3:51885434-51885453	Msa0646240:intron	40.0%
	CTCAATCTGTCTTGTCAACT+GGG	-	chr4_3:51885531-51885550	None:intergenic	40.0%
	ACAAGACAGATTGAGCTTGT+GGG	+	chr4_3:51885536-51885555	Msa0646240:intron	40.0%
	CTCCACAAAACAAACATGAG+AGG	+	chr4_3:51885579-51885598	Msa0646240:intron	40.0%
!!!	CTCCTCTCATGTTTGTTTTG+TGG	-	chr4_3:51885584-51885603	None:intergenic	40.0%
	AGGAGCTTCCTAGAAGAAAT+CGG	+	chr4_3:51885599-51885618	Msa0646240:intron	40.0%
	AACTCAAAGAGCCAAAGTTG+AGG	+	chr4_3:51885847-51885866	Msa0646240:intron	40.0%
	GCCAAAGTTGAGGAATACTT+AGG	+	chr4_3:51885857-51885876	Msa0646240:intron	40.0%
	TACAATACCACATGTGCTTG+TGG	+	chr4_3:51886040-51886059	Msa0646240:intron	40.0%
	CAGTGCCACAAATATTTGGT+TGG	-	chr4_3:51886077-51886096	None:intergenic	40.0%
	CCTTCAGTGCCACAAATATT+TGG	-	chr4_3:51886081-51886100	None:intergenic	40.0%
!	CCAAATATTTGTGGCACTGA+AGG	+	chr4_3:51886078-51886097	Msa0646240:intron	40.0%
!	CAATGATGGGGTATGATTGA+AGG	+	chr4_3:51886126-51886145	Msa0646240:intron	40.0%
!	TAGGAACATAGAGCATTCCA+TGG	-	chr4_3:51886321-51886340	None:intergenic	40.0%
	GGAATGCTCTATGTTCCTAT+TGG	+	chr4_3:51886322-51886341	Msa0646240:CDS	40.0%
!	TGGTGCTGGAATGTTTGAAA+TGG	+	chr4_3:51886354-51886373	Msa0646240:CDS	40.0%
!	GAAATGGACTCAATTAGAGG+TGG	+	chr4_3:51886370-51886389	Msa0646240:CDS	40.0%
	ATTAGAGGTGGATCTCCATA+TGG	+	chr4_3:51886382-51886401	Msa0646240:CDS	40.0%
	CCAGAAGAGAATGAATGACA+AGG	-	chr4_3:51886631-51886650	None:intergenic	40.0%
	CCTTGTCATTCATTCTCTTC+TGG	+	chr4_3:51886628-51886647	Msa0646240:three_prime_UTR	40.0%
	TGTCATTCATTCTCTTCTGG+AGG	+	chr4_3:51886631-51886650	Msa0646240:three_prime_UTR	40.0%
	AAAAAGACAGAGAGGTGGGT+GGG	-	chr4_3:51884383-51884402	None:intergenic	45.0%
	AGCACCTGAGAAAGATGATG+AGG	+	chr4_3:51884974-51884993	Msa0646240:CDS	45.0%
	GGAACCTCATCATCTTTCTC+AGG	-	chr4_3:51884981-51885000	None:intergenic	45.0%
	GATCTCTGCTGAGAATTTGG+TGG	+	chr4_3:51885004-51885023	Msa0646240:CDS	45.0%
!	AGAATTTGGTGGAGGCTGAT+GGG	+	chr4_3:51885015-51885034	Msa0646240:CDS	45.0%
!!	AGGCTGATGGGTTGTTGTTT+GGG	+	chr4_3:51885027-51885046	Msa0646240:CDS	45.0%
!	GAAGGGACTTTTCGATTCCA+CGG	+	chr4_3:51885085-51885104	Msa0646240:CDS	45.0%
!	AAGGGACTTTTCGATTCCAC+GGG	+	chr4_3:51885086-51885105	Msa0646240:CDS	45.0%
!!	GTTAGTACTGGTACTCAAGG+TGG	+	chr4_3:51885158-51885177	Msa0646240:CDS	45.0%
	CCTCTTACGCTGTAGTTTCT+TGG	-	chr4_3:51885187-51885206	None:intergenic	45.0%
	CCAAGAAACTACAGCGTAAG+AGG	+	chr4_3:51885184-51885203	Msa0646240:intron	45.0%
	GCTCAATCTGTCTTGTCAAC+TGG	-	chr4_3:51885532-51885551	None:intergenic	45.0%
	GACAAGACAGATTGAGCTTG+TGG	+	chr4_3:51885535-51885554	Msa0646240:intron	45.0%
	ACACAAACCACAAGCACATG+TGG	-	chr4_3:51886050-51886069	None:intergenic	45.0%
!	GAACATAGAGCATTCCATGG+TGG	-	chr4_3:51886318-51886337	None:intergenic	45.0%
	TCTTGAACCATCTCCTGCAT+AGG	-	chr4_3:51886416-51886435	None:intergenic	45.0%
!	TTGGCACTTGCTGAGTATCA+AGG	+	chr4_3:51886454-51886473	Msa0646240:CDS	45.0%
!!	GTTGGTGGTATGAGATTGGT+AGG	+	chr4_3:51886597-51886616	Msa0646240:three_prime_UTR	45.0%
	AAAAAGACAGAGAGGTGGGT+GGG	-	chr4_3:51884383-51884402	None:intergenic	45.0%
	AGCACCTGAGAAAGATGATG+AGG	+	chr4_3:51884974-51884993	Msa0646240:CDS	45.0%
	GGAACCTCATCATCTTTCTC+AGG	-	chr4_3:51884981-51885000	None:intergenic	45.0%
	GATCTCTGCTGAGAATTTGG+TGG	+	chr4_3:51885004-51885023	Msa0646240:CDS	45.0%
!	AGAATTTGGTGGAGGCTGAT+GGG	+	chr4_3:51885015-51885034	Msa0646240:CDS	45.0%
!!	AGGCTGATGGGTTGTTGTTT+GGG	+	chr4_3:51885027-51885046	Msa0646240:CDS	45.0%
!	GAAGGGACTTTTCGATTCCA+CGG	+	chr4_3:51885085-51885104	Msa0646240:CDS	45.0%
!	AAGGGACTTTTCGATTCCAC+GGG	+	chr4_3:51885086-51885105	Msa0646240:CDS	45.0%
!!	GTTAGTACTGGTACTCAAGG+TGG	+	chr4_3:51885158-51885177	Msa0646240:CDS	45.0%
	CCTCTTACGCTGTAGTTTCT+TGG	-	chr4_3:51885187-51885206	None:intergenic	45.0%
	CCAAGAAACTACAGCGTAAG+AGG	+	chr4_3:51885184-51885203	Msa0646240:intron	45.0%
	GCTCAATCTGTCTTGTCAAC+TGG	-	chr4_3:51885532-51885551	None:intergenic	45.0%
	GACAAGACAGATTGAGCTTG+TGG	+	chr4_3:51885535-51885554	Msa0646240:intron	45.0%
	ACACAAACCACAAGCACATG+TGG	-	chr4_3:51886050-51886069	None:intergenic	45.0%
!	GAACATAGAGCATTCCATGG+TGG	-	chr4_3:51886318-51886337	None:intergenic	45.0%
	TCTTGAACCATCTCCTGCAT+AGG	-	chr4_3:51886416-51886435	None:intergenic	45.0%
!	TTGGCACTTGCTGAGTATCA+AGG	+	chr4_3:51886454-51886473	Msa0646240:CDS	45.0%
!!	GTTGGTGGTATGAGATTGGT+AGG	+	chr4_3:51886597-51886616	Msa0646240:three_prime_UTR	45.0%
!!	CAATGCAACGTGAAGGTGCT+TGG	-	chr4_3:51884353-51884372	None:intergenic	50.0%
	GAAAAAGACAGAGAGGTGGG+TGG	-	chr4_3:51884384-51884403	None:intergenic	50.0%
!	CTCTGCTGAGAATTTGGTGG+AGG	+	chr4_3:51885007-51885026	Msa0646240:CDS	50.0%
!	GAGAATTTGGTGGAGGCTGA+TGG	+	chr4_3:51885014-51885033	Msa0646240:CDS	50.0%
!!	GAGGCTGATGGGTTGTTGTT+TGG	+	chr4_3:51885026-51885045	Msa0646240:CDS	50.0%
!	TGTTGTTTGGGTTTCCGACG+AGG	+	chr4_3:51885039-51885058	Msa0646240:CDS	50.0%
!	TTTGGGTTTCCGACGAGGTT+TGG	+	chr4_3:51885044-51885063	Msa0646240:CDS	50.0%
!	TCCGACGAGGTTTGGTAGTA+TGG	+	chr4_3:51885052-51885071	Msa0646240:CDS	50.0%
	GCCATACTACCAAACCTCGT+CGG	-	chr4_3:51885056-51885075	None:intergenic	50.0%
!	GACGAGGTTTGGTAGTATGG+CGG	+	chr4_3:51885055-51885074	Msa0646240:CDS	50.0%
	TAGTATGGCGGCACAGATGA+AGG	+	chr4_3:51885067-51885086	Msa0646240:CDS	50.0%
	AGTATGGCGGCACAGATGAA+GGG	+	chr4_3:51885068-51885087	Msa0646240:CDS	50.0%
!	AGGGACTTTTCGATTCCACG+GGG	+	chr4_3:51885087-51885106	Msa0646240:CDS	50.0%
	TGGAAGGAACAGAAGCTTGC+TGG	+	chr4_3:51885116-51885135	Msa0646240:CDS	50.0%
!!	AGTACTGGTACTCAAGGTGG+TGG	+	chr4_3:51885161-51885180	Msa0646240:CDS	50.0%
	AGATTGAGCTTGTGGGTGAG+AGG	+	chr4_3:51885543-51885562	Msa0646240:intron	50.0%
	GCATAGGTTCCAGCACCATA+TGG	-	chr4_3:51886400-51886419	None:intergenic	50.0%
!	TATGGTGCTGGAACCTATGC+AGG	+	chr4_3:51886400-51886419	Msa0646240:CDS	50.0%
	TGCAGGAGATGGTTCAAGAC+AGG	+	chr4_3:51886417-51886436	Msa0646240:CDS	50.0%
	ACAGGCAACTGAAGCTGAGT+TGG	+	chr4_3:51886435-51886454	Msa0646240:CDS	50.0%
!!	CAATGCAACGTGAAGGTGCT+TGG	-	chr4_3:51884353-51884372	None:intergenic	50.0%
	GAAAAAGACAGAGAGGTGGG+TGG	-	chr4_3:51884384-51884403	None:intergenic	50.0%
!	CTCTGCTGAGAATTTGGTGG+AGG	+	chr4_3:51885007-51885026	Msa0646240:CDS	50.0%
!	GAGAATTTGGTGGAGGCTGA+TGG	+	chr4_3:51885014-51885033	Msa0646240:CDS	50.0%
!!	GAGGCTGATGGGTTGTTGTT+TGG	+	chr4_3:51885026-51885045	Msa0646240:CDS	50.0%
!	TGTTGTTTGGGTTTCCGACG+AGG	+	chr4_3:51885039-51885058	Msa0646240:CDS	50.0%
!	TTTGGGTTTCCGACGAGGTT+TGG	+	chr4_3:51885044-51885063	Msa0646240:CDS	50.0%
!	TCCGACGAGGTTTGGTAGTA+TGG	+	chr4_3:51885052-51885071	Msa0646240:CDS	50.0%
	GCCATACTACCAAACCTCGT+CGG	-	chr4_3:51885056-51885075	None:intergenic	50.0%
!	GACGAGGTTTGGTAGTATGG+CGG	+	chr4_3:51885055-51885074	Msa0646240:CDS	50.0%
	TAGTATGGCGGCACAGATGA+AGG	+	chr4_3:51885067-51885086	Msa0646240:CDS	50.0%
	AGTATGGCGGCACAGATGAA+GGG	+	chr4_3:51885068-51885087	Msa0646240:CDS	50.0%
!	AGGGACTTTTCGATTCCACG+GGG	+	chr4_3:51885087-51885106	Msa0646240:CDS	50.0%
	TGGAAGGAACAGAAGCTTGC+TGG	+	chr4_3:51885116-51885135	Msa0646240:CDS	50.0%
!!	AGTACTGGTACTCAAGGTGG+TGG	+	chr4_3:51885161-51885180	Msa0646240:CDS	50.0%
	AGATTGAGCTTGTGGGTGAG+AGG	+	chr4_3:51885543-51885562	Msa0646240:intron	50.0%
	GCATAGGTTCCAGCACCATA+TGG	-	chr4_3:51886400-51886419	None:intergenic	50.0%
!	TATGGTGCTGGAACCTATGC+AGG	+	chr4_3:51886400-51886419	Msa0646240:CDS	50.0%
	TGCAGGAGATGGTTCAAGAC+AGG	+	chr4_3:51886417-51886436	Msa0646240:CDS	50.0%
	ACAGGCAACTGAAGCTGAGT+TGG	+	chr4_3:51886435-51886454	Msa0646240:CDS	50.0%
	TTGGCAGCGTCTCTACGACA+CGG	-	chr4_3:51884932-51884951	None:intergenic	55.0%
	TGTCGTAGAGACGCTGCCAA+AGG	+	chr4_3:51884932-51884951	Msa0646240:CDS	55.0%
!	GACGCTGCCAAAGGAAGTGT+TGG	+	chr4_3:51884941-51884960	Msa0646240:CDS	55.0%
!!	AAGCTTGCTGGTGTTCCTGC+TGG	+	chr4_3:51885128-51885147	Msa0646240:CDS	55.0%
!!	AGCTTGCTGGTGTTCCTGCT+GGG	+	chr4_3:51885129-51885148	Msa0646240:CDS	55.0%
	TTTGGGCGTGGGGTCAATGA+TGG	+	chr4_3:51886112-51886131	Msa0646240:intron	55.0%
	TTGGGCGTGGGGTCAATGAT+GGG	+	chr4_3:51886113-51886132	Msa0646240:intron	55.0%
	GGTGGATCTCCATATGGTGC+TGG	+	chr4_3:51886388-51886407	Msa0646240:CDS	55.0%
	GCTGGAACCTATGCAGGAGA+TGG	+	chr4_3:51886406-51886425	Msa0646240:CDS	55.0%
	TTGGCAGCGTCTCTACGACA+CGG	-	chr4_3:51884932-51884951	None:intergenic	55.0%
	TGTCGTAGAGACGCTGCCAA+AGG	+	chr4_3:51884932-51884951	Msa0646240:CDS	55.0%
!	GACGCTGCCAAAGGAAGTGT+TGG	+	chr4_3:51884941-51884960	Msa0646240:CDS	55.0%
!!	AAGCTTGCTGGTGTTCCTGC+TGG	+	chr4_3:51885128-51885147	Msa0646240:CDS	55.0%
!!	AGCTTGCTGGTGTTCCTGCT+GGG	+	chr4_3:51885129-51885148	Msa0646240:CDS	55.0%
	TTTGGGCGTGGGGTCAATGA+TGG	+	chr4_3:51886112-51886131	Msa0646240:intron	55.0%
	TTGGGCGTGGGGTCAATGAT+GGG	+	chr4_3:51886113-51886132	Msa0646240:intron	55.0%
	GGTGGATCTCCATATGGTGC+TGG	+	chr4_3:51886388-51886407	Msa0646240:CDS	55.0%
	GCTGGAACCTATGCAGGAGA+TGG	+	chr4_3:51886406-51886425	Msa0646240:CDS	55.0%
	AAGACAGAGAGGTGGGTGGG+TGG	-	chr4_3:51884380-51884399	None:intergenic	60.0%
	TCGATTCCACGGGGCAGTTG+TGG	+	chr4_3:51885096-51885115	Msa0646240:CDS	60.0%
	TTCCACGGGGCAGTTGTGGA+AGG	+	chr4_3:51885100-51885119	Msa0646240:CDS	60.0%
	TTCCTTCCACAACTGCCCCG+TGG	-	chr4_3:51885105-51885124	None:intergenic	60.0%
	TGGGCGTGGGGTCAATGATG+GGG	+	chr4_3:51886114-51886133	Msa0646240:intron	60.0%
	AAGACAGAGAGGTGGGTGGG+TGG	-	chr4_3:51884380-51884399	None:intergenic	60.0%
	TCGATTCCACGGGGCAGTTG+TGG	+	chr4_3:51885096-51885115	Msa0646240:CDS	60.0%
	TTCCACGGGGCAGTTGTGGA+AGG	+	chr4_3:51885100-51885119	Msa0646240:CDS	60.0%
	TTCCTTCCACAACTGCCCCG+TGG	-	chr4_3:51885105-51885124	None:intergenic	60.0%
	TGGGCGTGGGGTCAATGATG+GGG	+	chr4_3:51886114-51886133	Msa0646240:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_3	gene	51884308	51886756	51884308	ID=Msa0646240;Name=Msa0646240
chr4_3	mRNA	51884308	51886756	51884308	ID=Msa0646240-mRNA-1;Parent=Msa0646240;Name=Msa0646240-mRNA-1;_AED=0.01;_eAED=0.01;_QI=346\|1\|1\|1\|1\|1\|2\|234\|258
chr4_3	exon	51884308	51885198	51884308	ID=Msa0646240-mRNA-1:exon:12609;Parent=Msa0646240-mRNA-1
chr4_3	exon	51886291	51886756	51886291	ID=Msa0646240-mRNA-1:exon:12610;Parent=Msa0646240-mRNA-1
chr4_3	five_prime_UTR	51884308	51884653	51884308	ID=Msa0646240-mRNA-1:five_prime_utr;Parent=Msa0646240-mRNA-1
chr4_3	CDS	51884654	51885198	51884654	ID=Msa0646240-mRNA-1:cds;Parent=Msa0646240-mRNA-1
chr4_3	CDS	51886291	51886522	51886291	ID=Msa0646240-mRNA-1:cds;Parent=Msa0646240-mRNA-1
chr4_3	three_prime_UTR	51886523	51886756	51886523	ID=Msa0646240-mRNA-1:three_prime_utr;Parent=Msa0646240-mRNA-1

Gene Sequence

>Msa0646240

ATGGGGAAAGGAAGAGGTTGCATACCAAGCAAGAAAAAAGCACCAACTACAGAAGAGAATGAACCTCTTAGTGTTGAAAACCAAATTCAACAAAATGAAACAACAAGTAGAAGCATAGATGTAGCAACAATAGATGTGGCAACAACATCAGAAGAAGCAGTGAAAAAGCTCAAAGTTTACATTGTTTTTTATTCAATGTATGGTCATGTGGAATCATTGGCAAGATCATTGAAAAAAGGGGTTGATTCTGTTGATGGAGTTGAAGGGTTTTTGTACCGTGTCGTAGAGACGCTGCCAAAGGAAGTGTTGGAACTAATGAAAGCACCTGAGAAAGATGATGAGGTTCCTTTGATCTCTGCTGAGAATTTGGTGGAGGCTGATGGGTTGTTGTTTGGGTTTCCGACGAGGTTTGGTAGTATGGCGGCACAGATGAAGGGACTTTTCGATTCCACGGGGCAGTTGTGGAAGGAACAGAAGCTTGCTGGTGTTCCTGCTGGGTTTTTTGTTAGTACTGGTACTCAAGGTGGTGGCCAAGAAACTACAGCCTGGACAGCAATAACACAATTAGTCCACCATGGAATGCTCTATGTTCCTATTGGATATACTTTTGGTGCTGGAATGTTTGAAATGGACTCAATTAGAGGTGGATCTCCATATGGTGCTGGAACCTATGCAGGAGATGGTTCAAGACAGGCAACTGAAGCTGAGTTGGCACTTGCTGAGTATCAAGGTAGATACATGGCTAATATAGTCAAGAAGTTAGGCCAGAAAAGCTAG

Protein sequence

>Msa0646240

MGKGRGCIPSKKKAPTTEENEPLSVENQIQQNETTSRSIDVATIDVATTSEEAVKKLKVYIVFYSMYGHVESLARSLKKGVDSVDGVEGFLYRVVETLPKEVLELMKAPEKDDEVPLISAENLVEADGLLFGFPTRFGSMAAQMKGLFDSTGQLWKEQKLAGVPAGFFVSTGTQGGGQETTAWTAITQLVHHGMLYVPIGYTFGAGMFEMDSIRGGSPYGAGTYAGDGSRQATEAELALAEYQGRYMANIVKKLGQKS*