Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0662120 | XP_013446817.1 | 96.502 | 486 | 14 | 1 | 1 | 486 | 2 | 484 | 0.0 | 946 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014410 | Msa0662120 | 0.832981 | 6.932549e-56 | -8.615850e-47 |
| Msa0044180 | Msa0662120 | 0.814085 | 1.843750e-51 | -8.615850e-47 |
| Msa0064550 | Msa0662120 | 0.852114 | 5.707113e-61 | -8.615850e-47 |
| Msa0072830 | Msa0662120 | 0.807300 | 5.406406e-50 | -8.615850e-47 |
| Msa0072860 | Msa0662120 | 0.808275 | 3.355367e-50 | -8.615850e-47 |
| Msa0089010 | Msa0662120 | 0.802786 | 4.754841e-49 | -8.615850e-47 |
| Msa0104360 | Msa0662120 | 0.808304 | 3.307666e-50 | -8.615850e-47 |
| Msa0109490 | Msa0662120 | 0.840677 | 7.530851e-58 | -8.615850e-47 |
| Msa0116470 | Msa0662120 | 0.801039 | 1.086814e-48 | -8.615850e-47 |
| Msa0116510 | Msa0662120 | 0.812290 | 4.567171e-51 | -8.615850e-47 |
| Msa0604880 | Msa0662120 | 0.805377 | 1.374858e-49 | -8.615850e-47 |
| Msa0605250 | Msa0662120 | 0.818311 | 2.094077e-52 | -8.615850e-47 |
| Msa0610810 | Msa0662120 | 0.811505 | 6.769080e-51 | -8.615850e-47 |
| Msa0627050 | Msa0662120 | 0.837701 | 4.451332e-57 | -8.615850e-47 |
| Msa0646190 | Msa0662120 | 0.801278 | 9.709560e-49 | -8.615850e-47 |
| Msa0649310 | Msa0662120 | 0.806459 | 8.144163e-50 | -8.615850e-47 |
| Msa0651310 | Msa0662120 | 0.814085 | 1.843621e-51 | -8.615850e-47 |
| Msa0662120 | Msa0675010 | 0.828374 | 9.313184e-55 | -8.615850e-47 |
| Msa0662120 | Msa0679780 | 0.808146 | 3.574256e-50 | -8.615850e-47 |
| Msa0662120 | Msa0693400 | 0.800612 | 1.327972e-48 | -8.615850e-47 |
| Msa0662120 | Msa0709660 | 0.807985 | 3.867969e-50 | -8.615850e-47 |
| Msa0662120 | Msa0749150 | 0.821855 | 3.233832e-53 | -8.615850e-47 |
| Msa0662120 | Msa0790640 | 0.805201 | 1.496216e-49 | -8.615850e-47 |
| Msa0662120 | Msa0792880 | 0.817040 | 4.051831e-52 | -8.615850e-47 |
| Msa0662120 | Msa0797000 | 0.802192 | 6.305288e-49 | -8.615850e-47 |
| Msa0662120 | Msa0813030 | 0.823816 | 1.129765e-53 | -8.615850e-47 |
| Msa0662120 | Msa0828570 | 0.805253 | 1.459168e-49 | -8.615850e-47 |
| Msa0662120 | Msa0828900 | 0.816380 | 5.698289e-52 | -8.615850e-47 |
| Msa0662120 | Msa0853500 | 0.833269 | 5.875805e-56 | -8.615850e-47 |
| Msa0662120 | Msa0984000 | 0.837782 | 4.241665e-57 | -8.615850e-47 |
| Msa0662120 | Msa1004210 | 0.820597 | 6.307445e-53 | -8.615850e-47 |
| Msa0662120 | Msa1046610 | 0.803491 | 3.398253e-49 | -8.615850e-47 |
| Msa0662120 | Msa1144730 | 0.806597 | 7.614069e-50 | -8.615850e-47 |
| Msa0662120 | Msa1158090 | 0.800477 | 1.414755e-48 | -8.615850e-47 |
| Msa0662120 | Msa1173380 | 0.828250 | 9.976884e-55 | -8.615850e-47 |
| Msa0662120 | Msa1182800 | 0.832966 | 6.991650e-56 | -8.615850e-47 |
| Msa0662120 | Msa1182830 | 0.837075 | 6.439077e-57 | -8.615850e-47 |
| Msa0662120 | Msa1237260 | 0.809580 | 1.763700e-50 | -8.615850e-47 |
| Msa0662120 | Msa1272950 | 0.856755 | 2.595121e-62 | -8.615850e-47 |
| Msa0662120 | Msa1306190 | 0.800122 | 1.670966e-48 | -8.615850e-47 |
| Msa0662120 | Msa1349810 | 0.822559 | 2.220188e-53 | -8.615850e-47 |
| Msa0662120 | Msa1354090 | 0.807651 | 4.555047e-50 | -8.615850e-47 |
| Msa0662120 | Msa1434660 | 0.819050 | 1.423793e-52 | -8.615850e-47 |
| Msa0662120 | Msa1460310 | -0.813876 | 2.049539e-51 | -8.615850e-47 |
| Msa0154240 | Msa0662120 | 0.820531 | 6.529348e-53 | -8.615850e-47 |
| Msa0154270 | Msa0662120 | 0.839644 | 1.400741e-57 | -8.615850e-47 |
| Msa0180290 | Msa0662120 | 0.823537 | 1.313090e-53 | -8.615850e-47 |
| Msa0187980 | Msa0662120 | 0.801021 | 1.096114e-48 | -8.615850e-47 |
| Msa0377280 | Msa0662120 | 0.823106 | 1.656012e-53 | -8.615850e-47 |
| Msa0389060 | Msa0662120 | 0.825574 | 4.351791e-54 | -8.615850e-47 |
| Msa0392050 | Msa0662120 | 0.804943 | 1.694612e-49 | -8.615850e-47 |
| Msa0401340 | Msa0662120 | 0.830203 | 3.352055e-55 | -8.615850e-47 |
| Msa0404690 | Msa0662120 | 0.823000 | 1.752898e-53 | -8.615850e-47 |
| Msa0435010 | Msa0662120 | 0.806818 | 6.839287e-50 | -8.615850e-47 |
| Msa0448120 | Msa0662120 | 0.827303 | 1.685803e-54 | -8.615850e-47 |
| Msa0462590 | Msa0662120 | 0.805730 | 1.159265e-49 | -8.615850e-47 |
| Msa0469950 | Msa0662120 | 0.802858 | 4.595496e-49 | -8.615850e-47 |
| Msa0479100 | Msa0662120 | 0.811303 | 7.491290e-51 | -8.615850e-47 |
| Msa0260190 | Msa0662120 | 0.816873 | 4.417509e-52 | -8.615850e-47 |
| Msa0264940 | Msa0662120 | -0.814720 | 1.334549e-51 | -8.615850e-47 |
| Msa0302990 | Msa0662120 | -0.814545 | 1.459235e-51 | -8.615850e-47 |
| Msa0344680 | Msa0662120 | 0.804507 | 2.089362e-49 | -8.615850e-47 |
| Msa0354390 | Msa0662120 | 0.807784 | 4.268015e-50 | -8.615850e-47 |
| Msa0530340 | Msa0662120 | 0.822346 | 2.488192e-53 | -8.615850e-47 |
| Msa0549540 | Msa0662120 | 0.812732 | 3.656979e-51 | -8.615850e-47 |
| Msa0570680 | Msa0662120 | 0.842874 | 1.981227e-58 | -8.615850e-47 |
| Msa0584280 | Msa0662120 | 0.826761 | 2.272093e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0662120 | MtrunA17_Chr8g0382321 | 96.502 | 486 | 14 | 1 | 1 | 486 | 2 | 484 | 0.0 | 946 |
| Msa0662120 | MtrunA17_Chr8g0382331 | 80.206 | 485 | 90 | 3 | 1 | 483 | 1 | 481 | 0.0 | 781 |
| Msa0662120 | MtrunA17_Chr8g0382381 | 73.786 | 515 | 104 | 3 | 1 | 486 | 2 | 514 | 0.0 | 758 |
| Msa0662120 | MtrunA17_Chr5g0425781 | 69.053 | 475 | 142 | 3 | 1 | 471 | 1 | 474 | 0.0 | 674 |
| Msa0662120 | MtrunA17_Chr5g0403601 | 42.117 | 463 | 254 | 2 | 5 | 459 | 38 | 494 | 3.32e-110 | 335 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0662120 | AT5G10190.1 | 68.172 | 487 | 150 | 4 | 1 | 486 | 1 | 483 | 0.0 | 672 |
| Msa0662120 | AT1G78130.1 | 68.828 | 478 | 147 | 2 | 1 | 477 | 1 | 477 | 0.0 | 655 |
| Msa0662120 | AT5G10190.2 | 68.876 | 347 | 105 | 2 | 1 | 347 | 1 | 344 | 5.78e-168 | 478 |
| Msa0662120 | AT5G10190.3 | 63.408 | 358 | 126 | 4 | 130 | 486 | 1 | 354 | 6.80e-160 | 457 |
| Msa0662120 | AT4G36790.1 | 43.478 | 460 | 242 | 5 | 5 | 459 | 42 | 488 | 5.59e-124 | 371 |
| Msa0662120 | AT2G18590.1 | 37.365 | 463 | 266 | 5 | 12 | 459 | 19 | 472 | 2.39e-97 | 302 |
Find 127 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTATTTGGAGGATGGTTT+GGG | 0.176197 | 4_3:-74022639 | Msa0662120:CDS |
| AATTCATTTGGTGGTCTATT+TGG | 0.184781 | 4_3:-74022652 | Msa0662120:CDS |
| GGGACTATTTCTGCAAATAT+TGG | 0.217177 | 4_3:+74022424 | None:intergenic |
| ATCTTTCATTTCAGAATAAA+AGG | 0.221195 | 4_3:+74022849 | None:intergenic |
| GGTAAATTTAGCAGGTATTA+TGG | 0.231740 | 4_3:-74024410 | Msa0662120:CDS |
| ATGGTACAACAGCAATTATT+TGG | 0.249179 | 4_3:-74022693 | Msa0662120:CDS |
| CAAGTTTACTAATGTACTAT+TGG | 0.254950 | 4_3:+74022014 | None:intergenic |
| TGTCTCCTCCACCTTCTTGC+AGG | 0.267945 | 4_3:-74024173 | Msa0662120:intron |
| ACAGAATTTGAAGATCCTTT+TGG | 0.270812 | 4_3:+74022283 | None:intergenic |
| GAAGGTATTTGCAATGTCTT+TGG | 0.271436 | 4_3:+74024535 | None:intergenic |
| CAATTGTGGAGTCAGCAATT+AGG | 0.274160 | 4_3:+74023118 | None:intergenic |
| GGTCTATTTGGAGGATGGTT+TGG | 0.276131 | 4_3:-74022640 | Msa0662120:CDS |
| GTTCCTAGAGTTGTGACTTT+TGG | 0.286318 | 4_3:+74024639 | None:intergenic |
| ATTGTAGCTCAAGGAGTATT+TGG | 0.288198 | 4_3:-74022778 | Msa0662120:CDS |
| AACATTATTCTTCCGGTGTT+TGG | 0.315148 | 4_3:+74022595 | None:intergenic |
| AGCAACCGTGGTGTAGCTTT+TGG | 0.330743 | 4_3:-74023093 | Msa0662120:CDS |
| ACATCAATCTCTGGTATATC+TGG | 0.333223 | 4_3:-74023003 | Msa0662120:CDS |
| TAGTGTTATAGTTGGTATAT+TGG | 0.339062 | 4_3:-74022947 | Msa0662120:CDS |
| TTGTGCCAACATTATTCTTC+CGG | 0.340790 | 4_3:+74022588 | None:intergenic |
| TCAGAATAAAAGGACTTGTT+TGG | 0.342500 | 4_3:+74022859 | None:intergenic |
| TTTATAATTTCTAATTCATT+TGG | 0.347136 | 4_3:-74022664 | Msa0662120:CDS |
| ACTCTTTGGTTAGAACTAAC+AGG | 0.347707 | 4_3:-74022724 | Msa0662120:CDS |
| TTTGGGTGGCTTCATCTAAC+AGG | 0.354682 | 4_3:-74023075 | Msa0662120:CDS |
| GCAATTAGGGACTGGATTGC+TGG | 0.356921 | 4_3:+74023132 | None:intergenic |
| AATTGTGGAGTCAGCAATTA+GGG | 0.370621 | 4_3:+74023119 | None:intergenic |
| GGAAACCTTGGAAGCATCAT+TGG | 0.372474 | 4_3:-74023054 | Msa0662120:CDS |
| CACGCCCTTCGTACATGGTT+TGG | 0.374886 | 4_3:-74022500 | Msa0662120:CDS |
| AAGTTTACTAATGTACTATT+GGG | 0.380827 | 4_3:+74022015 | None:intergenic |
| TGCATTAGTTGAATCAGAAA+TGG | 0.385550 | 4_3:-74022113 | Msa0662120:CDS |
| ATGAAGACACATACTGCAAT+TGG | 0.389599 | 4_3:+74022190 | None:intergenic |
| ATAGCCGTTCGCGATTTCTC+AGG | 0.408991 | 4_3:+74022403 | None:intergenic |
| TCAAGAGCTTTCAATGGGAT+TGG | 0.410764 | 4_3:-74023171 | Msa0662120:CDS |
| GACTGAGAGATGGGGTCGAC+TGG | 0.414168 | 4_3:+74024562 | None:intergenic |
| CTTGCTCGCTCCTTGTCCCT+CGG | 0.415138 | 4_3:+74022142 | None:intergenic |
| GTAAACTCTGAATTCATAGA+TGG | 0.416898 | 4_3:-74021943 | Msa0662120:three_prime_UTR |
| ATAATTTCTAATTCATTTGG+TGG | 0.451585 | 4_3:-74022661 | Msa0662120:CDS |
| CCATCCACGCCCTTCGTACA+TGG | 0.454110 | 4_3:-74022505 | Msa0662120:CDS |
| AAGGGCGTGGATGGATCATT+AGG | 0.454956 | 4_3:+74022514 | None:intergenic |
| GAAAATATCTGATTTATAGT+AGG | 0.457079 | 4_3:-74024662 | Msa0662120:five_prime_UTR |
| CAATTTCAAGAGCTTTCAAT+GGG | 0.458162 | 4_3:-74023176 | Msa0662120:CDS |
| GCGAACGGCTATATATGCTT+TGG | 0.460484 | 4_3:-74022392 | Msa0662120:CDS |
| TTGCTCGCTCCTTGTCCCTC+GGG | 0.461664 | 4_3:+74022143 | None:intergenic |
| ATTGCAAATACCTTCACTCT+TGG | 0.463910 | 4_3:-74024527 | Msa0662120:five_prime_UTR |
| TCATTTGGTGGTCTATTTGG+AGG | 0.472636 | 4_3:-74022649 | Msa0662120:CDS |
| TCCATTCATAAGCACTATCA+AGG | 0.475334 | 4_3:+74021968 | None:intergenic |
| AACAACAAAATTGCTGCTAA+AGG | 0.476676 | 4_3:+74022544 | None:intergenic |
| GCTACAATTATCTGAAATGA+TGG | 0.478740 | 4_3:+74022793 | None:intergenic |
| CCATGTACGAAGGGCGTGGA+TGG | 0.478903 | 4_3:+74022505 | None:intergenic |
| TTGGTGGTCTATTTGGAGGA+TGG | 0.479982 | 4_3:-74022645 | Msa0662120:CDS |
| GGACAAGGAGCGAGCAAGAA+TGG | 0.482854 | 4_3:-74022137 | Msa0662120:CDS |
| GCAATTTCAAGAGCTTTCAA+TGG | 0.486903 | 4_3:-74023177 | Msa0662120:CDS |
| GCATTGATTAGTGTTATAGT+TGG | 0.491293 | 4_3:-74022955 | Msa0662120:CDS |
| AACGCTGACCCAACTGCGTT+AGG | 0.491732 | 4_3:-74024331 | Msa0662120:CDS |
| ATCAGAAATGGAACAACTAA+AGG | 0.493730 | 4_3:-74022101 | Msa0662120:CDS |
| GGTTATAAACCAATTCCAAA+AGG | 0.499646 | 4_3:-74022298 | Msa0662120:CDS |
| TCTCACTCTCTACCGATCCC+TGG | 0.500868 | 4_3:-74024305 | Msa0662120:CDS |
| TTTGGAGGAGACTGAGAGAT+GGG | 0.504360 | 4_3:+74024553 | None:intergenic |
| ATGTGAGAATAGACACAAGC+AGG | 0.504518 | 4_3:+74024752 | None:intergenic |
| TTGGTGCTGGTAAATTTAGC+AGG | 0.506244 | 4_3:-74024418 | Msa0662120:CDS |
| CCAATCTCTTTGTATACTCC+TGG | 0.508882 | 4_3:+74024364 | None:intergenic |
| TGAGAGAACCTAACGCAGTT+GGG | 0.510746 | 4_3:+74024323 | None:intergenic |
| GGTATTTGCAATGTCTTTGG+AGG | 0.513116 | 4_3:+74024538 | None:intergenic |
| CAATCTCTGGTATATCTGGC+TGG | 0.516377 | 4_3:-74022999 | Msa0662120:CDS |
| TCTATTTGGAGGATGGTTTG+GGG | 0.516912 | 4_3:-74022638 | Msa0662120:CDS |
| CCAGGAGTATACAAAGAGAT+TGG | 0.519790 | 4_3:-74024364 | Msa0662120:CDS |
| CTAGCCTCAACATCAATCTC+TGG | 0.520079 | 4_3:-74023012 | Msa0662120:CDS |
| AGGCCAAAAGTCACAACTCT+AGG | 0.523145 | 4_3:-74024642 | Msa0662120:five_prime_UTR |
| GGAGTATTTGGATCATTTCG+AGG | 0.525574 | 4_3:-74022766 | Msa0662120:CDS |
| CGTGCACATGTCATTGCTCT+TGG | 0.526129 | 4_3:-74024232 | Msa0662120:CDS |
| TGGAGTCAGCAATTAGGGAC+TGG | 0.533319 | 4_3:+74023124 | None:intergenic |
| GAGAACCAATGATGCTTCCA+AGG | 0.539889 | 4_3:+74023049 | None:intergenic |
| TGAGCTAAAACGCCAACAAT+CGG | 0.541127 | 4_3:+74022331 | None:intergenic |
| ACCTTGATAGTGCTTATGAA+TGG | 0.542677 | 4_3:-74021969 | Msa0662120:three_prime_UTR |
| CAAAATTGCTGCTAAAGGAA+TGG | 0.545018 | 4_3:+74022549 | None:intergenic |
| GTGAGAGAACCTAACGCAGT+TGG | 0.547909 | 4_3:+74024322 | None:intergenic |
| AGAGACAGTAACATTGGTGC+TGG | 0.548018 | 4_3:-74024431 | Msa0662120:CDS |
| GGTAACAGAATGCTTGAACC+AGG | 0.550482 | 4_3:+74024287 | None:intergenic |
| TTTCAGATAATTGTAGCTCA+AGG | 0.553580 | 4_3:-74022787 | Msa0662120:CDS |
| TAGCCGTTCGCGATTTCTCA+GGG | 0.557145 | 4_3:+74022404 | None:intergenic |
| AATATTGGATCATTAGTTGC+TGG | 0.560697 | 4_3:+74022439 | None:intergenic |
| CAAATATTATAAATAAAATG+AGG | 0.564551 | 4_3:-74024712 | Msa0662120:five_prime_UTR |
| TGGGGTCGACTGGAATGTGA+TGG | 0.566170 | 4_3:+74024572 | None:intergenic |
| ACCACGGTTGCTATCAATTG+TGG | 0.566692 | 4_3:+74023104 | None:intergenic |
| CTTCATCTAACAGGAAACCT+TGG | 0.567615 | 4_3:-74023066 | Msa0662120:CDS |
| TTATGAAACTCATGATAATG+AGG | 0.568900 | 4_3:-74022053 | Msa0662120:CDS |
| GAAATCAGAGACAGTAACAT+TGG | 0.570485 | 4_3:-74024437 | Msa0662120:CDS |
| GATTGTTAAGACACTGTATG+TGG | 0.570794 | 4_3:+74024600 | None:intergenic |
| AAATGCGGCATCACTTGCTA+AGG | 0.575912 | 4_3:-74022236 | Msa0662120:CDS |
| GAGTATTTGGATCATTTCGA+GGG | 0.578224 | 4_3:-74022765 | Msa0662120:CDS |
| CTTTGGAGGAGACTGAGAGA+TGG | 0.578644 | 4_3:+74024552 | None:intergenic |
| TGTTGTGTGTTTCAGCGTTG+AGG | 0.579547 | 4_3:+74024502 | None:intergenic |
| TATCAAGGTATCAAATTACA+AGG | 0.579854 | 4_3:+74021983 | None:intergenic |
| TATACCAGAGATTGATGTTG+AGG | 0.584273 | 4_3:+74023008 | None:intergenic |
| TGATATAACCTGCAAGAAGG+TGG | 0.588694 | 4_3:+74024165 | None:intergenic |
| GTAACAGAATGCTTGAACCA+GGG | 0.588995 | 4_3:+74024288 | None:intergenic |
| CAAACCATGTACGAAGGGCG+TGG | 0.593148 | 4_3:+74022501 | None:intergenic |
| CACGATTGTGTCGTGTGGCA+AGG | 0.598295 | 4_3:+74024251 | None:intergenic |
| AGAAATGGAACAACTAAAGG+TGG | 0.599904 | 4_3:-74022098 | Msa0662120:CDS |
| TATAACCTGCAAGAAGGTGG+AGG | 0.604688 | 4_3:+74024168 | None:intergenic |
| AGGTGATATAACCTGCAAGA+AGG | 0.605726 | 4_3:+74024162 | None:intergenic |
| ATGTTGGCACAAATAAGTGC+GGG | 0.610438 | 4_3:-74022577 | Msa0662120:CDS |
| AGAATGCTTGAACCAGGGAT+CGG | 0.613048 | 4_3:+74024293 | None:intergenic |
| GAACTAACAGGCTTCTCACA+TGG | 0.615234 | 4_3:-74022712 | Msa0662120:CDS |
| AAACACCGGAAGAATAATGT+TGG | 0.617470 | 4_3:-74022593 | Msa0662120:CDS |
| TTTCACATACCCGAGGGACA+AGG | 0.623199 | 4_3:-74022152 | Msa0662120:CDS |
| CGTTGAGGATCCAAGAGTGA+AGG | 0.623969 | 4_3:+74024517 | None:intergenic |
| GCTGATGAGTCATTGTTACC+AGG | 0.624049 | 4_3:-74024382 | Msa0662120:CDS |
| TTCTCTATTTCACATACCCG+AGG | 0.625461 | 4_3:-74022159 | Msa0662120:CDS |
| TGAAACTGATAGAGAAAATG+CGG | 0.626937 | 4_3:-74022251 | Msa0662120:CDS |
| GGGGTCGACTGGAATGTGAT+GGG | 0.630033 | 4_3:+74024573 | None:intergenic |
| GTGGCAAGGTAAGCAGCAAG+AGG | 0.631198 | 4_3:+74024265 | None:intergenic |
| AAAACCAAACCATGTACGAA+GGG | 0.647921 | 4_3:+74022496 | None:intergenic |
| AATGTTGGCACAAATAAGTG+CGG | 0.648186 | 4_3:-74022578 | Msa0662120:CDS |
| TCTCTATTTCACATACCCGA+GGG | 0.649176 | 4_3:-74022158 | Msa0662120:CDS |
| GCTAAAACGCCAACAATCGG+TGG | 0.651078 | 4_3:+74022334 | None:intergenic |
| TGGCAAGGTAAGCAGCAAGA+GGG | 0.653848 | 4_3:+74024266 | None:intergenic |
| TGTGAGAATAGACACAAGCA+GGG | 0.654370 | 4_3:+74024753 | None:intergenic |
| TAAAACCAAACCATGTACGA+AGG | 0.657037 | 4_3:+74022495 | None:intergenic |
| TCTCAACGGTTACCAAACAC+CGG | 0.659434 | 4_3:-74022607 | Msa0662120:CDS |
| CTGGATTGCTGGAATCACAA+TGG | 0.666656 | 4_3:+74023143 | None:intergenic |
| ATATTATAAATAAAATGAGG+AGG | 0.679641 | 4_3:-74024709 | Msa0662120:five_prime_UTR |
| TCCACAATTGATAGCAACCG+TGG | 0.681448 | 4_3:-74023105 | Msa0662120:CDS |
| AGTCCCTGAGAAATCGCGAA+CGG | 0.681481 | 4_3:-74022407 | Msa0662120:CDS |
| TTGGAGGAGACTGAGAGATG+GGG | 0.686189 | 4_3:+74024554 | None:intergenic |
| ATGTGCACGATTGTGTCGTG+TGG | 0.695146 | 4_3:+74024246 | None:intergenic |
| GCCACCCAAAAGCTACACCA+CGG | 0.722794 | 4_3:+74023088 | None:intergenic |
| CTAAAGGTGGAACATGACAG+AGG | 0.739543 | 4_3:-74022085 | Msa0662120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAATAAAATTAATTTA+TGG | + | chr4_3:74022868-74022887 | None:intergenic | 0.0% |
| !! | CAAATATTATAAATAAAATG+AGG | - | chr4_3:74021856-74021875 | Msa0662120:three_prime_UTR | 10.0% |
| !! | TTTATAATTTCTAATTCATT+TGG | - | chr4_3:74023904-74023923 | Msa0662120:intron | 10.0% |
| !!! | TTTTTTTTGTATTTTGAAAA+TGG | - | chr4_3:74024755-74024774 | Msa0662120:five_prime_UTR | 10.0% |
| !!! | TTTTTTTGTATTTTGAAAAT+GGG | - | chr4_3:74024756-74024775 | Msa0662120:five_prime_UTR | 10.0% |
| !! | ATATTATAAATAAAATGAGG+AGG | - | chr4_3:74021859-74021878 | Msa0662120:three_prime_UTR | 15.0% |
| !!! | ACTTTAATCTTCTTATATTT+TGG | + | chr4_3:74022962-74022981 | None:intergenic | 15.0% |
| !!! | TTTTTTGTATTTTGAAAATG+GGG | - | chr4_3:74024757-74024776 | Msa0662120:five_prime_UTR | 15.0% |
| !! | GAAAATATCTGATTTATAGT+AGG | - | chr4_3:74021906-74021925 | Msa0662120:three_prime_UTR | 20.0% |
| !!! | CTTGTTTATTATGATTGTTT+TGG | - | chr4_3:74022450-74022469 | Msa0662120:CDS | 20.0% |
| !!! | TATTATGATTGTTTTGGTTA+TGG | - | chr4_3:74022456-74022475 | Msa0662120:CDS | 20.0% |
| !! | AATAAAATACGAGTTGTTAA+GGG | + | chr4_3:74022692-74022711 | None:intergenic | 20.0% |
| !! | AAATAAAATACGAGTTGTTA+AGG | + | chr4_3:74022693-74022712 | None:intergenic | 20.0% |
| !! | ACATAAAAACGATGAATATA+TGG | - | chr4_3:74022919-74022938 | Msa0662120:CDS | 20.0% |
| !! | TATAAGAAGATTAAAGTTAC+TGG | - | chr4_3:74022965-74022984 | Msa0662120:CDS | 20.0% |
| !!! | TTTCTTTTATATTAACCCTT+CGG | + | chr4_3:74023136-74023155 | None:intergenic | 20.0% |
| !! | CTAACATGTTATTGTATAAT+AGG | - | chr4_3:74023366-74023385 | Msa0662120:intron | 20.0% |
| !! | ATCTTTCATTTCAGAATAAA+AGG | + | chr4_3:74023722-74023741 | None:intergenic | 20.0% |
| !! | ATAATTTCTAATTCATTTGG+TGG | - | chr4_3:74023907-74023926 | Msa0662120:intron | 20.0% |
| !! | AAGTTTACTAATGTACTATT+GGG | + | chr4_3:74024556-74024575 | None:intergenic | 20.0% |
| ! | CTATGAAAAATTGAAAAGAG+AGG | + | chr4_3:74022429-74022448 | None:intergenic | 25.0% |
| !! | CTCTCTTTTCAATTTTTCAT+AGG | - | chr4_3:74022427-74022446 | Msa0662120:CDS | 25.0% |
| ! | TAGAAATGATCTAACTGTTA+AGG | + | chr4_3:74022775-74022794 | None:intergenic | 25.0% |
| !!! | ATCGTTTTTATGTAATCAAG+GGG | + | chr4_3:74022912-74022931 | None:intergenic | 25.0% |
| !!! | CATCGTTTTTATGTAATCAA+GGG | + | chr4_3:74022913-74022932 | None:intergenic | 25.0% |
| !!! | TCATCGTTTTTATGTAATCA+AGG | + | chr4_3:74022914-74022933 | None:intergenic | 25.0% |
| !!! | ATATTTTGGCACTAAATCTA+CGG | + | chr4_3:74022948-74022967 | None:intergenic | 25.0% |
| !! | ATGCATGTGAGAATAATTTT+TGG | - | chr4_3:74023051-74023070 | Msa0662120:CDS | 25.0% |
| !!! | GTCAGATTTTACTTATTTCT+CGG | - | chr4_3:74023073-74023092 | Msa0662120:CDS | 25.0% |
| !!! | ATACATTTTGAAAAGTAGTC+TGG | - | chr4_3:74023200-74023219 | Msa0662120:intron | 25.0% |
| ! | TAAGAAACATTTGATATGCA+AGG | + | chr4_3:74023312-74023331 | None:intergenic | 25.0% |
| ! | TATAGTAAGTACAACTCATA+TGG | + | chr4_3:74023344-74023363 | None:intergenic | 25.0% |
| !! | TAGTGTTATAGTTGGTATAT+TGG | - | chr4_3:74023621-74023640 | Msa0662120:intron | 25.0% |
| !!! | GTAGTTATTTTGTTGTCTTT+TGG | + | chr4_3:74023676-74023695 | None:intergenic | 25.0% |
| !!! | GTTTATCATTTTTCACTCTT+TGG | - | chr4_3:74023830-74023849 | Msa0662120:intron | 25.0% |
| !! | TTATGAAACTCATGATAATG+AGG | - | chr4_3:74024515-74024534 | Msa0662120:five_prime_UTR | 25.0% |
| ! | CAAGTTTACTAATGTACTAT+TGG | + | chr4_3:74024557-74024576 | None:intergenic | 25.0% |
| !! | TATCAAGGTATCAAATTACA+AGG | + | chr4_3:74024588-74024607 | None:intergenic | 25.0% |
| !!! | ATCTCTGTCTTTGTTTTCTA+TGG | + | chr4_3:74022111-74022130 | None:intergenic | 30.0% |
| GGTAAATTTAGCAGGTATTA+TGG | - | chr4_3:74022158-74022177 | Msa0662120:CDS | 30.0% | |
| !!! | TGTTTTGGTTATGGACATAA+TGG | - | chr4_3:74022465-74022484 | Msa0662120:CDS | 30.0% |
| !!! | GTTTTGGTTATGGACATAAT+GGG | - | chr4_3:74022466-74022485 | Msa0662120:CDS | 30.0% |
| ATATTAACCCTTCGGTTATT+AGG | + | chr4_3:74023128-74023147 | None:intergenic | 30.0% | |
| !! | TGCTCAGAAATAAAGTATTG+TGG | - | chr4_3:74023275-74023294 | Msa0662120:intron | 30.0% |
| !! | GCTCAGAAATAAAGTATTGT+GGG | - | chr4_3:74023276-74023295 | Msa0662120:intron | 30.0% |
| AGTACAACTCATATGGTATA+AGG | + | chr4_3:74023337-74023356 | None:intergenic | 30.0% | |
| CAATTTCAAGAGCTTTCAAT+GGG | - | chr4_3:74023392-74023411 | Msa0662120:intron | 30.0% | |
| !! | GCATTGATTAGTGTTATAGT+TGG | - | chr4_3:74023613-74023632 | Msa0662120:intron | 30.0% |
| ! | TCAGAATAAAAGGACTTGTT+TGG | + | chr4_3:74023712-74023731 | None:intergenic | 30.0% |
| ! | GCTACAATTATCTGAAATGA+TGG | + | chr4_3:74023778-74023797 | None:intergenic | 30.0% |
| TTTCAGATAATTGTAGCTCA+AGG | - | chr4_3:74023781-74023800 | Msa0662120:intron | 30.0% | |
| ATGGTACAACAGCAATTATT+TGG | - | chr4_3:74023875-74023894 | Msa0662120:intron | 30.0% | |
| ! | AATTCATTTGGTGGTCTATT+TGG | - | chr4_3:74023916-74023935 | Msa0662120:intron | 30.0% |
| !!! | TTGGGGATTTTTTATCTCAA+CGG | - | chr4_3:74023947-74023966 | Msa0662120:intron | 30.0% |
| AACAACAAAATTGCTGCTAA+AGG | + | chr4_3:74024027-74024046 | None:intergenic | 30.0% | |
| !!! | TGGTTTGGTTTTAGTCATTT+TGG | - | chr4_3:74024083-74024102 | Msa0662120:intron | 30.0% |
| !!! | GGTTTGGTTTTAGTCATTTT+GGG | - | chr4_3:74024084-74024103 | Msa0662120:intron | 30.0% |
| AATATTGGATCATTAGTTGC+TGG | + | chr4_3:74024132-74024151 | None:intergenic | 30.0% | |
| !!! | GTTTTAGCTCAACATGTTTA+TGG | - | chr4_3:74024249-74024268 | Msa0662120:CDS | 30.0% |
| GGTTATAAACCAATTCCAAA+AGG | - | chr4_3:74024270-74024289 | Msa0662120:CDS | 30.0% | |
| !!! | TTTGAAGATCCTTTTGGAAT+TGG | + | chr4_3:74024282-74024301 | None:intergenic | 30.0% |
| ! | ACAGAATTTGAAGATCCTTT+TGG | + | chr4_3:74024288-74024307 | None:intergenic | 30.0% |
| TGAAACTGATAGAGAAAATG+CGG | - | chr4_3:74024317-74024336 | Msa0662120:CDS | 30.0% | |
| TGCATTAGTTGAATCAGAAA+TGG | - | chr4_3:74024455-74024474 | Msa0662120:exon | 30.0% | |
| ATCAGAAATGGAACAACTAA+AGG | - | chr4_3:74024467-74024486 | Msa0662120:five_prime_UTR | 30.0% | |
| GTAAACTCTGAATTCATAGA+TGG | - | chr4_3:74024625-74024644 | Msa0662120:five_prime_UTR | 30.0% | |
| GATTGTTAAGACACTGTATG+TGG | + | chr4_3:74021971-74021990 | None:intergenic | 35.0% | |
| !! | GAAGGTATTTGCAATGTCTT+TGG | + | chr4_3:74022036-74022055 | None:intergenic | 35.0% |
| ATTGCAAATACCTTCACTCT+TGG | - | chr4_3:74022041-74022060 | Msa0662120:CDS | 35.0% | |
| GAAATCAGAGACAGTAACAT+TGG | - | chr4_3:74022131-74022150 | Msa0662120:CDS | 35.0% | |
| ! | TTAAAGTTACTGGTCTCAAG+TGG | - | chr4_3:74022975-74022994 | Msa0662120:CDS | 35.0% |
| TTCTCACATGCATTGAACTT+GGG | + | chr4_3:74023044-74023063 | None:intergenic | 35.0% | |
| ATTCTCACATGCATTGAACT+TGG | + | chr4_3:74023045-74023064 | None:intergenic | 35.0% | |
| ! | CTTATTTCTCGGTCGAAATT+TGG | - | chr4_3:74023084-74023103 | Msa0662120:CDS | 35.0% |
| ! | TTTGATTCTAAAGACCCTAG+CGG | - | chr4_3:74023234-74023253 | Msa0662120:intron | 35.0% |
| GCAATTTCAAGAGCTTTCAA+TGG | - | chr4_3:74023391-74023410 | Msa0662120:intron | 35.0% | |
| AATTGTGGAGTCAGCAATTA+GGG | + | chr4_3:74023452-74023471 | None:intergenic | 35.0% | |
| TATACCAGAGATTGATGTTG+AGG | + | chr4_3:74023563-74023582 | None:intergenic | 35.0% | |
| ACATCAATCTCTGGTATATC+TGG | - | chr4_3:74023565-74023584 | Msa0662120:intron | 35.0% | |
| !! | TTGTTGTCTTTTGGAAAGTG+TGG | + | chr4_3:74023667-74023686 | None:intergenic | 35.0% |
| !! | ATTGTAGCTCAAGGAGTATT+TGG | - | chr4_3:74023790-74023809 | Msa0662120:intron | 35.0% |
| GAGTATTTGGATCATTTCGA+GGG | - | chr4_3:74023803-74023822 | Msa0662120:intron | 35.0% | |
| ACTCTTTGGTTAGAACTAAC+AGG | - | chr4_3:74023844-74023863 | Msa0662120:intron | 35.0% | |
| AACATTATTCTTCCGGTGTT+TGG | + | chr4_3:74023976-74023995 | None:intergenic | 35.0% | |
| AAACACCGGAAGAATAATGT+TGG | - | chr4_3:74023975-74023994 | Msa0662120:intron | 35.0% | |
| TTGTGCCAACATTATTCTTC+CGG | + | chr4_3:74023983-74024002 | None:intergenic | 35.0% | |
| AATGTTGGCACAAATAAGTG+CGG | - | chr4_3:74023990-74024009 | Msa0662120:intron | 35.0% | |
| CAAAATTGCTGCTAAAGGAA+TGG | + | chr4_3:74024022-74024041 | None:intergenic | 35.0% | |
| AAAACCAAACCATGTACGAA+GGG | + | chr4_3:74024075-74024094 | None:intergenic | 35.0% | |
| TAAAACCAAACCATGTACGA+AGG | + | chr4_3:74024076-74024095 | None:intergenic | 35.0% | |
| !!! | TTTTGGGACTAATCACTTTC+TGG | - | chr4_3:74024100-74024119 | Msa0662120:intron | 35.0% |
| !! | GGGACTATTTCTGCAAATAT+TGG | + | chr4_3:74024147-74024166 | None:intergenic | 35.0% |
| !! | TCGATCTTTTGAGAGTATGT+TGG | - | chr4_3:74024200-74024219 | Msa0662120:CDS | 35.0% |
| ATGAAGACACATACTGCAAT+TGG | + | chr4_3:74024381-74024400 | None:intergenic | 35.0% | |
| AGAAATGGAACAACTAAAGG+TGG | - | chr4_3:74024470-74024489 | Msa0662120:five_prime_UTR | 35.0% | |
| !! | ACCTTGATAGTGCTTATGAA+TGG | - | chr4_3:74024599-74024618 | Msa0662120:five_prime_UTR | 35.0% |
| TCCATTCATAAGCACTATCA+AGG | + | chr4_3:74024603-74024622 | None:intergenic | 35.0% | |
| TGTGAGAATAGACACAAGCA+GGG | + | chr4_3:74021818-74021837 | None:intergenic | 40.0% | |
| ATGTGAGAATAGACACAAGC+AGG | + | chr4_3:74021819-74021838 | None:intergenic | 40.0% | |
| ! | GTTCCTAGAGTTGTGACTTT+TGG | + | chr4_3:74021932-74021951 | None:intergenic | 40.0% |
| GGTATTTGCAATGTCTTTGG+AGG | + | chr4_3:74022033-74022052 | None:intergenic | 40.0% | |
| !! | TTGGTGCTGGTAAATTTAGC+AGG | - | chr4_3:74022150-74022169 | Msa0662120:CDS | 40.0% |
| CCAATCTCTTTGTATACTCC+TGG | + | chr4_3:74022207-74022226 | None:intergenic | 40.0% | |
| ! | CCAGGAGTATACAAAGAGAT+TGG | - | chr4_3:74022204-74022223 | Msa0662120:CDS | 40.0% |
| GTAACAGAATGCTTGAACCA+GGG | + | chr4_3:74022283-74022302 | None:intergenic | 40.0% | |
| !!! | TTGCTCTTGGTGCTTTTCTT+TGG | - | chr4_3:74022349-74022368 | Msa0662120:CDS | 40.0% |
| !!! | TGCTCTTGGTGCTTTTCTTT+GGG | - | chr4_3:74022350-74022369 | Msa0662120:CDS | 40.0% |
| TGATATAACCTGCAAGAAGG+TGG | + | chr4_3:74022406-74022425 | None:intergenic | 40.0% | |
| AGGTGATATAACCTGCAAGA+AGG | + | chr4_3:74022409-74022428 | None:intergenic | 40.0% | |
| ATGCATTGAACTTGGGGTTT+GGG | + | chr4_3:74023037-74023056 | None:intergenic | 40.0% | |
| TCTCACATGCATTGAACTTG+GGG | + | chr4_3:74023043-74023062 | None:intergenic | 40.0% | |
| CGGTCGAAATTTGGATTACT+AGG | - | chr4_3:74023093-74023112 | Msa0662120:CDS | 40.0% | |
| TCAAGAGCTTTCAATGGGAT+TGG | - | chr4_3:74023397-74023416 | Msa0662120:intron | 40.0% | |
| CAATTGTGGAGTCAGCAATT+AGG | + | chr4_3:74023453-74023472 | None:intergenic | 40.0% | |
| CTTCATCTAACAGGAAACCT+TGG | - | chr4_3:74023502-74023521 | Msa0662120:intron | 40.0% | |
| ! | CTGGAGAATAGCTTTTCATC+TGG | - | chr4_3:74023588-74023607 | Msa0662120:intron | 40.0% |
| ! | GAGAATAGCTTTTCATCTGG+TGG | - | chr4_3:74023591-74023610 | Msa0662120:intron | 40.0% |
| ! | GGAGTATTTGGATCATTTCG+AGG | - | chr4_3:74023802-74023821 | Msa0662120:intron | 40.0% |
| ! | TCATTTGGTGGTCTATTTGG+AGG | - | chr4_3:74023919-74023938 | Msa0662120:intron | 40.0% |
| GTCTATTTGGAGGATGGTTT+GGG | - | chr4_3:74023929-74023948 | Msa0662120:intron | 40.0% | |
| TCTATTTGGAGGATGGTTTG+GGG | - | chr4_3:74023930-74023949 | Msa0662120:intron | 40.0% | |
| ATGTTGGCACAAATAAGTGC+GGG | - | chr4_3:74023991-74024010 | Msa0662120:intron | 40.0% | |
| TGAGCTAAAACGCCAACAAT+CGG | + | chr4_3:74024240-74024259 | None:intergenic | 40.0% | |
| TTCTCTATTTCACATACCCG+AGG | - | chr4_3:74024409-74024428 | Msa0662120:CDS | 40.0% | |
| TCTCTATTTCACATACCCGA+GGG | - | chr4_3:74024410-74024429 | Msa0662120:CDS | 40.0% | |
| AGGCCAAAAGTCACAACTCT+AGG | - | chr4_3:74021926-74021945 | Msa0662120:three_prime_UTR | 45.0% | |
| TTTGGAGGAGACTGAGAGAT+GGG | + | chr4_3:74022018-74022037 | None:intergenic | 45.0% | |
| TGTTGTGTGTTTCAGCGTTG+AGG | + | chr4_3:74022069-74022088 | None:intergenic | 45.0% | |
| AGAGACAGTAACATTGGTGC+TGG | - | chr4_3:74022137-74022156 | Msa0662120:CDS | 45.0% | |
| GCTGATGAGTCATTGTTACC+AGG | - | chr4_3:74022186-74022205 | Msa0662120:CDS | 45.0% | |
| TGAGAGAACCTAACGCAGTT+GGG | + | chr4_3:74022248-74022267 | None:intergenic | 45.0% | |
| AGAATGCTTGAACCAGGGAT+CGG | + | chr4_3:74022278-74022297 | None:intergenic | 45.0% | |
| GGTAACAGAATGCTTGAACC+AGG | + | chr4_3:74022284-74022303 | None:intergenic | 45.0% | |
| TATAACCTGCAAGAAGGTGG+AGG | + | chr4_3:74022403-74022422 | None:intergenic | 45.0% | |
| CATGCATTGAACTTGGGGTT+TGG | + | chr4_3:74023038-74023057 | None:intergenic | 45.0% | |
| CCTTCGGTTATTAGGTGAAG+GGG | + | chr4_3:74023120-74023139 | None:intergenic | 45.0% | |
| CCCTTCGGTTATTAGGTGAA+GGG | + | chr4_3:74023121-74023140 | None:intergenic | 45.0% | |
| CCCTTCACCTAATAACCGAA+GGG | - | chr4_3:74023118-74023137 | Msa0662120:CDS | 45.0% | |
| ACCCTTCGGTTATTAGGTGA+AGG | + | chr4_3:74023122-74023141 | None:intergenic | 45.0% | |
| TGTGTGTAGTTTCACCGCTA+GGG | + | chr4_3:74023251-74023270 | None:intergenic | 45.0% | |
| ATGTGTGTAGTTTCACCGCT+AGG | + | chr4_3:74023252-74023271 | None:intergenic | 45.0% | |
| CTGGATTGCTGGAATCACAA+TGG | + | chr4_3:74023428-74023447 | None:intergenic | 45.0% | |
| ! | TCCACAATTGATAGCAACCG+TGG | - | chr4_3:74023463-74023482 | Msa0662120:intron | 45.0% |
| ACCACGGTTGCTATCAATTG+TGG | + | chr4_3:74023467-74023486 | None:intergenic | 45.0% | |
| TTTGGGTGGCTTCATCTAAC+AGG | - | chr4_3:74023493-74023512 | Msa0662120:intron | 45.0% | |
| !! | GGAAACCTTGGAAGCATCAT+TGG | - | chr4_3:74023514-74023533 | Msa0662120:intron | 45.0% |
| GAGAACCAATGATGCTTCCA+AGG | + | chr4_3:74023522-74023541 | None:intergenic | 45.0% | |
| CTAGCCTCAACATCAATCTC+TGG | - | chr4_3:74023556-74023575 | Msa0662120:intron | 45.0% | |
| CAATCTCTGGTATATCTGGC+TGG | - | chr4_3:74023569-74023588 | Msa0662120:intron | 45.0% | |
| GAACTAACAGGCTTCTCACA+TGG | - | chr4_3:74023856-74023875 | Msa0662120:intron | 45.0% | |
| ! | TTGGTGGTCTATTTGGAGGA+TGG | - | chr4_3:74023923-74023942 | Msa0662120:intron | 45.0% |
| GGTCTATTTGGAGGATGGTT+TGG | - | chr4_3:74023928-74023947 | Msa0662120:intron | 45.0% | |
| TCTCAACGGTTACCAAACAC+CGG | - | chr4_3:74023961-74023980 | Msa0662120:intron | 45.0% | |
| GCGAACGGCTATATATGCTT+TGG | - | chr4_3:74024176-74024195 | Msa0662120:CDS | 45.0% | |
| !! | TCTTTTGCTCCACCGATTGT+TGG | - | chr4_3:74024225-74024244 | Msa0662120:CDS | 45.0% |
| ! | AAATGCGGCATCACTTGCTA+AGG | - | chr4_3:74024332-74024351 | Msa0662120:CDS | 45.0% |
| CTAAAGGTGGAACATGACAG+AGG | - | chr4_3:74024483-74024502 | Msa0662120:five_prime_UTR | 45.0% | |
| !!! | AATTGATTAATTTTATTTTT+AGG | + | chr4_3:74022721-74022740 | None:intergenic | 5.0% |
| TTGGAGGAGACTGAGAGATG+GGG | + | chr4_3:74022017-74022036 | None:intergenic | 50.0% | |
| ! | CTTTGGAGGAGACTGAGAGA+TGG | + | chr4_3:74022019-74022038 | None:intergenic | 50.0% |
| CGTTGAGGATCCAAGAGTGA+AGG | + | chr4_3:74022054-74022073 | None:intergenic | 50.0% | |
| GTGAGAGAACCTAACGCAGT+TGG | + | chr4_3:74022249-74022268 | None:intergenic | 50.0% | |
| TGGCAAGGTAAGCAGCAAGA+GGG | + | chr4_3:74022305-74022324 | None:intergenic | 50.0% | |
| ATGTGCACGATTGTGTCGTG+TGG | + | chr4_3:74022325-74022344 | None:intergenic | 50.0% | |
| CGTGCACATGTCATTGCTCT+TGG | - | chr4_3:74022336-74022355 | Msa0662120:CDS | 50.0% | |
| CCCCTTCACCTAATAACCGA+AGG | - | chr4_3:74023117-74023136 | Msa0662120:CDS | 50.0% | |
| GCAATTAGGGACTGGATTGC+TGG | + | chr4_3:74023439-74023458 | None:intergenic | 50.0% | |
| TGGAGTCAGCAATTAGGGAC+TGG | + | chr4_3:74023447-74023466 | None:intergenic | 50.0% | |
| ! | AGCAACCGTGGTGTAGCTTT+TGG | - | chr4_3:74023475-74023494 | Msa0662120:intron | 50.0% |
| ! | GCAACCGTGGTGTAGCTTTT+GGG | - | chr4_3:74023476-74023495 | Msa0662120:intron | 50.0% |
| ! | AAGGGCGTGGATGGATCATT+AGG | + | chr4_3:74024057-74024076 | None:intergenic | 50.0% |
| AGTCCCTGAGAAATCGCGAA+CGG | - | chr4_3:74024161-74024180 | Msa0662120:intron | 50.0% | |
| TAGCCGTTCGCGATTTCTCA+GGG | + | chr4_3:74024167-74024186 | None:intergenic | 50.0% | |
| ATAGCCGTTCGCGATTTCTC+AGG | + | chr4_3:74024168-74024187 | None:intergenic | 50.0% | |
| GCTAAAACGCCAACAATCGG+TGG | + | chr4_3:74024237-74024256 | None:intergenic | 50.0% | |
| TTTCACATACCCGAGGGACA+AGG | - | chr4_3:74024416-74024435 | Msa0662120:CDS | 50.0% | |
| GGGGTCGACTGGAATGTGAT+GGG | + | chr4_3:74021998-74022017 | None:intergenic | 55.0% | |
| TGGGGTCGACTGGAATGTGA+TGG | + | chr4_3:74021999-74022018 | None:intergenic | 55.0% | |
| AACGCTGACCCAACTGCGTT+AGG | - | chr4_3:74022237-74022256 | Msa0662120:CDS | 55.0% | |
| TCTCACTCTCTACCGATCCC+TGG | - | chr4_3:74022263-74022282 | Msa0662120:CDS | 55.0% | |
| GTGGCAAGGTAAGCAGCAAG+AGG | + | chr4_3:74022306-74022325 | None:intergenic | 55.0% | |
| CACGATTGTGTCGTGTGGCA+AGG | + | chr4_3:74022320-74022339 | None:intergenic | 55.0% | |
| TGTCTCCTCCACCTTCTTGC+AGG | - | chr4_3:74022395-74022414 | Msa0662120:CDS | 55.0% | |
| ! | ACCGTGGTGTAGCTTTTGGG+TGG | - | chr4_3:74023479-74023498 | Msa0662120:intron | 55.0% |
| GCCACCCAAAAGCTACACCA+CGG | + | chr4_3:74023483-74023502 | None:intergenic | 55.0% | |
| CAAACCATGTACGAAGGGCG+TGG | + | chr4_3:74024070-74024089 | None:intergenic | 55.0% | |
| CACGCCCTTCGTACATGGTT+TGG | - | chr4_3:74024068-74024087 | Msa0662120:intron | 55.0% | |
| GGACAAGGAGCGAGCAAGAA+TGG | - | chr4_3:74024431-74024450 | Msa0662120:CDS | 55.0% | |
| GACTGAGAGATGGGGTCGAC+TGG | + | chr4_3:74022009-74022028 | None:intergenic | 60.0% | |
| ! | CCATGTACGAAGGGCGTGGA+TGG | + | chr4_3:74024066-74024085 | None:intergenic | 60.0% |
| CCATCCACGCCCTTCGTACA+TGG | - | chr4_3:74024063-74024082 | Msa0662120:intron | 60.0% | |
| TTGCTCGCTCCTTGTCCCTC+GGG | + | chr4_3:74024428-74024447 | None:intergenic | 60.0% | |
| CTTGCTCGCTCCTTGTCCCT+CGG | + | chr4_3:74024429-74024448 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 74021805 | 74024785 | 74021805 | ID=Msa0662120;Name=Msa0662120 |
| chr4_3 | mRNA | 74021805 | 74024785 | 74021805 | ID=Msa0662120-mRNA-1;Parent=Msa0662120;Name=Msa0662120-mRNA-1;_AED=0.00;_eAED=0.00;_QI=324|1|1|1|1|1|2|225|486 |
| chr4_3 | exon | 74021805 | 74023202 | 74021805 | ID=Msa0662120-mRNA-1:exon:22311;Parent=Msa0662120-mRNA-1 |
| chr4_3 | exon | 74024174 | 74024785 | 74024174 | ID=Msa0662120-mRNA-1:exon:22310;Parent=Msa0662120-mRNA-1 |
| chr4_3 | five_prime_UTR | 74024462 | 74024785 | 74024462 | ID=Msa0662120-mRNA-1:five_prime_utr;Parent=Msa0662120-mRNA-1 |
| chr4_3 | CDS | 74024174 | 74024461 | 74024174 | ID=Msa0662120-mRNA-1:cds;Parent=Msa0662120-mRNA-1 |
| chr4_3 | CDS | 74022030 | 74023202 | 74022030 | ID=Msa0662120-mRNA-1:cds;Parent=Msa0662120-mRNA-1 |
| chr4_3 | three_prime_UTR | 74021805 | 74022029 | 74021805 | ID=Msa0662120-mRNA-1:three_prime_utr;Parent=Msa0662120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
