Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584280 | XP_003606265.1 | 95.385 | 195 | 9 | 0 | 4 | 198 | 2 | 196 | 7.80e-136 | 388 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584280 | sp|Q56XJ7|Y4276_ARATH | 38.462 | 91 | 54 | 1 | 70 | 160 | 119 | 207 | 8.88e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0584280 | 0.802244 | 6.150292e-49 | -8.615850e-47 |
| Msa0005690 | Msa0584280 | 0.800873 | 1.175089e-48 | -8.615850e-47 |
| Msa0006050 | Msa0584280 | 0.814833 | 1.259820e-51 | -8.615850e-47 |
| Msa0006700 | Msa0584280 | 0.811806 | 5.823122e-51 | -8.615850e-47 |
| Msa0008850 | Msa0584280 | 0.810815 | 9.555611e-51 | -8.615850e-47 |
| Msa0012380 | Msa0584280 | 0.822525 | 2.261633e-53 | -8.615850e-47 |
| Msa0014410 | Msa0584280 | 0.854897 | 9.064004e-62 | -8.615850e-47 |
| Msa0020320 | Msa0584280 | 0.802028 | 6.812965e-49 | -8.615850e-47 |
| Msa0020630 | Msa0584280 | 0.831003 | 2.135084e-55 | -8.615850e-47 |
| Msa0026930 | Msa0584280 | 0.828348 | 9.450878e-55 | -8.615850e-47 |
| Msa0043940 | Msa0584280 | 0.839620 | 1.421318e-57 | -8.615850e-47 |
| Msa0044180 | Msa0584280 | 0.825478 | 4.587024e-54 | -8.615850e-47 |
| Msa0047470 | Msa0584280 | 0.817127 | 3.873860e-52 | -8.615850e-47 |
| Msa0054760 | Msa0584280 | 0.817120 | 3.887808e-52 | -8.615850e-47 |
| Msa0055280 | Msa0584280 | 0.802293 | 6.010385e-49 | -8.615850e-47 |
| Msa0061600 | Msa0584280 | -0.829085 | 6.268694e-55 | -8.615850e-47 |
| Msa0064550 | Msa0584280 | 0.888881 | 3.983359e-73 | -8.615850e-47 |
| Msa0068410 | Msa0584280 | 0.821264 | 4.428474e-53 | -8.615850e-47 |
| Msa0072830 | Msa0584280 | 0.836308 | 1.009964e-56 | -8.615850e-47 |
| Msa0072860 | Msa0584280 | 0.834832 | 2.386235e-56 | -8.615850e-47 |
| Msa0074760 | Msa0584280 | 0.809120 | 2.213740e-50 | -8.615850e-47 |
| Msa0074780 | Msa0584280 | 0.824892 | 6.309646e-54 | -8.615850e-47 |
| Msa0084680 | Msa0584280 | 0.806175 | 9.346481e-50 | -8.615850e-47 |
| Msa0092710 | Msa0584280 | 0.834705 | 2.568482e-56 | -8.615850e-47 |
| Msa0096510 | Msa0584280 | 0.805476 | 1.310728e-49 | -8.615850e-47 |
| Msa0101060 | Msa0584280 | 0.824980 | 6.015742e-54 | -8.615850e-47 |
| Msa0103160 | Msa0584280 | 0.809073 | 2.265668e-50 | -8.615850e-47 |
| Msa0104360 | Msa0584280 | 0.843631 | 1.244467e-58 | -8.615850e-47 |
| Msa0104390 | Msa0584280 | 0.839799 | 1.276546e-57 | -8.615850e-47 |
| Msa0106130 | Msa0584280 | -0.813673 | 2.272598e-51 | -8.615850e-47 |
| Msa0108070 | Msa0584280 | 0.854830 | 9.474257e-62 | -8.615850e-47 |
| Msa0109490 | Msa0584280 | 0.871294 | 7.623752e-67 | -8.615850e-47 |
| Msa0114240 | Msa0584280 | 0.806945 | 6.427757e-50 | -8.615850e-47 |
| Msa0114250 | Msa0584280 | 0.803238 | 3.834685e-49 | -8.615850e-47 |
| Msa0140290 | Msa0584280 | 0.801296 | 9.627439e-49 | -8.615850e-47 |
| Msa0153440 | Msa0584280 | 0.819231 | 1.294867e-52 | -8.615850e-47 |
| Msa0154180 | Msa0584280 | 0.830564 | 2.736245e-55 | -8.615850e-47 |
| Msa0154200 | Msa0584280 | 0.827994 | 1.150014e-54 | -8.615850e-47 |
| Msa0154220 | Msa0584280 | 0.842441 | 2.580690e-58 | -8.615850e-47 |
| Msa0154240 | Msa0584280 | 0.873402 | 1.512213e-67 | -8.615850e-47 |
| Msa0154270 | Msa0584280 | 0.869339 | 3.335197e-66 | -8.615850e-47 |
| Msa0155610 | Msa0584280 | 0.855345 | 6.712785e-62 | -8.615850e-47 |
| Msa0159750 | Msa0584280 | 0.834232 | 3.376463e-56 | -8.615850e-47 |
| Msa0171920 | Msa0584280 | 0.834252 | 3.337019e-56 | -8.615850e-47 |
| Msa0176710 | Msa0584280 | 0.804697 | 1.907763e-49 | -8.615850e-47 |
| Msa0178940 | Msa0584280 | 0.816063 | 6.706255e-52 | -8.615850e-47 |
| Msa0182640 | Msa0584280 | 0.844419 | 7.650677e-59 | -8.615850e-47 |
| Msa0183560 | Msa0584280 | 0.803758 | 2.992365e-49 | -8.615850e-47 |
| Msa0187980 | Msa0584280 | 0.804441 | 2.156946e-49 | -8.615850e-47 |
| Msa0197030 | Msa0584280 | 0.807060 | 6.078227e-50 | -8.615850e-47 |
| Msa0198440 | Msa0584280 | 0.807803 | 4.228066e-50 | -8.615850e-47 |
| Msa0199740 | Msa0584280 | 0.829984 | 3.790422e-55 | -8.615850e-47 |
| Msa0216210 | Msa0584280 | 0.847788 | 9.267275e-60 | -8.615850e-47 |
| Msa0216220 | Msa0584280 | 0.809128 | 2.204842e-50 | -8.615850e-47 |
| Msa0217470 | Msa0584280 | 0.822468 | 2.330920e-53 | -8.615850e-47 |
| Msa0224370 | Msa0584280 | 0.826060 | 3.336624e-54 | -8.615850e-47 |
| Msa0224400 | Msa0584280 | 0.817994 | 2.469733e-52 | -8.615850e-47 |
| Msa0232860 | Msa0584280 | 0.820860 | 5.485472e-53 | -8.615850e-47 |
| Msa0377280 | Msa0584280 | 0.815093 | 1.103234e-51 | -8.615850e-47 |
| Msa0380430 | Msa0584280 | 0.833657 | 4.701105e-56 | -8.615850e-47 |
| Msa0380650 | Msa0584280 | 0.805229 | 1.476150e-49 | -8.615850e-47 |
| Msa0382590 | Msa0584280 | 0.869282 | 3.478869e-66 | -8.615850e-47 |
| Msa0387970 | Msa0584280 | 0.823666 | 1.225134e-53 | -8.615850e-47 |
| Msa0389060 | Msa0584280 | 0.847007 | 1.517918e-59 | -8.615850e-47 |
| Msa0392050 | Msa0584280 | 0.872339 | 3.430448e-67 | -8.615850e-47 |
| Msa0392540 | Msa0584280 | 0.803760 | 2.989539e-49 | -8.615850e-47 |
| Msa0401340 | Msa0584280 | 0.864304 | 1.338654e-64 | -8.615850e-47 |
| Msa0404690 | Msa0584280 | 0.821846 | 3.249578e-53 | -8.615850e-47 |
| Msa0416540 | Msa0584280 | 0.801561 | 8.494239e-49 | -8.615850e-47 |
| Msa0418430 | Msa0584280 | 0.805669 | 1.193646e-49 | -8.615850e-47 |
| Msa0430290 | Msa0584280 | 0.803145 | 4.008587e-49 | -8.615850e-47 |
| Msa0431520 | Msa0584280 | 0.808732 | 2.679832e-50 | -8.615850e-47 |
| Msa0431830 | Msa0584280 | 0.803225 | 3.859053e-49 | -8.615850e-47 |
| Msa0432720 | Msa0584280 | 0.852842 | 3.540564e-61 | -8.615850e-47 |
| Msa0448080 | Msa0584280 | 0.808057 | 3.734526e-50 | -8.615850e-47 |
| Msa0448120 | Msa0584280 | 0.865293 | 6.558439e-65 | -8.615850e-47 |
| Msa0455260 | Msa0584280 | 0.801815 | 7.534868e-49 | -8.615850e-47 |
| Msa0462590 | Msa0584280 | 0.800187 | 1.620767e-48 | -8.615850e-47 |
| Msa0465800 | Msa0584280 | 0.809138 | 2.193898e-50 | -8.615850e-47 |
| Msa0469950 | Msa0584280 | 0.872614 | 2.777362e-67 | -8.615850e-47 |
| Msa0472740 | Msa0584280 | 0.803996 | 2.669955e-49 | -8.615850e-47 |
| Msa0481490 | Msa0584280 | 0.801532 | 8.612976e-49 | -8.615850e-47 |
| Msa0242290 | Msa0584280 | 0.839490 | 1.535948e-57 | -8.615850e-47 |
| Msa0253160 | Msa0584280 | 0.819857 | 9.316057e-53 | -8.615850e-47 |
| Msa0260190 | Msa0584280 | 0.900553 | 6.528107e-78 | -8.615850e-47 |
| Msa0264940 | Msa0584280 | -0.827851 | 1.245319e-54 | -8.615850e-47 |
| Msa0265580 | Msa0584280 | 0.815410 | 9.377829e-52 | -8.615850e-47 |
| Msa0265980 | Msa0584280 | -0.831156 | 1.958328e-55 | -8.615850e-47 |
| Msa0278670 | Msa0584280 | 0.807395 | 5.160880e-50 | -8.615850e-47 |
| Msa0281940 | Msa0584280 | 0.808289 | 3.332664e-50 | -8.615850e-47 |
| Msa0284870 | Msa0584280 | 0.807052 | 6.101755e-50 | -8.615850e-47 |
| Msa0291940 | Msa0584280 | 0.810925 | 9.042714e-51 | -8.615850e-47 |
| Msa0295570 | Msa0584280 | 0.824005 | 1.019981e-53 | -8.615850e-47 |
| Msa0296610 | Msa0584280 | 0.813107 | 3.026095e-51 | -8.615850e-47 |
| Msa0302990 | Msa0584280 | -0.826748 | 2.288392e-54 | -8.615850e-47 |
| Msa0303440 | Msa0584280 | 0.819200 | 1.315693e-52 | -8.615850e-47 |
| Msa0303500 | Msa0584280 | 0.815105 | 1.096490e-51 | -8.615850e-47 |
| Msa0318070 | Msa0584280 | 0.809436 | 1.893754e-50 | -8.615850e-47 |
| Msa0323630 | Msa0584280 | 0.802995 | 4.305767e-49 | -8.615850e-47 |
| Msa0334980 | Msa0584280 | 0.816401 | 5.636828e-52 | -8.615850e-47 |
| Msa0343370 | Msa0584280 | 0.804530 | 2.066574e-49 | -8.615850e-47 |
| Msa0344680 | Msa0584280 | 0.870318 | 1.597849e-66 | -8.615850e-47 |
| Msa0354390 | Msa0584280 | 0.865680 | 4.953467e-65 | -8.615850e-47 |
| Msa0357380 | Msa0584280 | 0.808657 | 2.780592e-50 | -8.615850e-47 |
| Msa0358290 | Msa0584280 | 0.801987 | 6.946066e-49 | -8.615850e-47 |
| Msa0486530 | Msa0584280 | 0.806620 | 7.529452e-50 | -8.615850e-47 |
| Msa0487490 | Msa0584280 | 0.814623 | 1.402179e-51 | -8.615850e-47 |
| Msa0525270 | Msa0584280 | 0.875572 | 2.771856e-68 | -8.615850e-47 |
| Msa0525280 | Msa0584280 | 0.864520 | 1.145877e-64 | -8.615850e-47 |
| Msa0530340 | Msa0584280 | 0.859855 | 3.098352e-63 | -8.615850e-47 |
| Msa0530950 | Msa0584280 | 0.826709 | 2.337112e-54 | -8.615850e-47 |
| Msa0542040 | Msa0584280 | 0.802366 | 5.804936e-49 | -8.615850e-47 |
| Msa0545230 | Msa0584280 | 0.850020 | 2.223964e-60 | -8.615850e-47 |
| Msa0546080 | Msa0584280 | 0.912933 | 1.102442e-83 | -8.615850e-47 |
| Msa0548210 | Msa0584280 | 0.812396 | 4.329403e-51 | -8.615850e-47 |
| Msa0549540 | Msa0584280 | 0.862101 | 6.432418e-64 | -8.615850e-47 |
| Msa0549760 | Msa0584280 | 0.822552 | 2.229144e-53 | -8.615850e-47 |
| Msa0556070 | Msa0584280 | 0.831225 | 1.883775e-55 | -8.615850e-47 |
| Msa0568600 | Msa0584280 | 0.848213 | 7.073282e-60 | -8.615850e-47 |
| Msa0568610 | Msa0584280 | 0.869767 | 2.418832e-66 | -8.615850e-47 |
| Msa0570680 | Msa0584280 | 0.811883 | 5.602352e-51 | -8.615850e-47 |
| Msa0579340 | Msa0584280 | 0.804417 | 2.181999e-49 | -8.615850e-47 |
| Msa0583740 | Msa0584280 | 0.800941 | 1.137828e-48 | -8.615850e-47 |
| Msa0584280 | Msa0600820 | 0.850686 | 1.446384e-60 | -8.615850e-47 |
| Msa0584280 | Msa0604880 | 0.853597 | 2.151717e-61 | -8.615850e-47 |
| Msa0584280 | Msa0605250 | 0.864750 | 9.715363e-65 | -8.615850e-47 |
| Msa0584280 | Msa0609790 | 0.817907 | 2.584087e-52 | -8.615850e-47 |
| Msa0584280 | Msa0618520 | 0.876265 | 1.601395e-68 | -8.615850e-47 |
| Msa0584280 | Msa0622250 | 0.837125 | 6.249729e-57 | -8.615850e-47 |
| Msa0584280 | Msa0624040 | 0.811732 | 6.044183e-51 | -8.615850e-47 |
| Msa0584280 | Msa0627050 | 0.833493 | 5.167935e-56 | -8.615850e-47 |
| Msa0584280 | Msa0628100 | 0.826343 | 2.857540e-54 | -8.615850e-47 |
| Msa0584280 | Msa0636720 | 0.807972 | 3.892743e-50 | -8.615850e-47 |
| Msa0584280 | Msa0646190 | 0.858228 | 9.513985e-63 | -8.615850e-47 |
| Msa0584280 | Msa0646340 | 0.853883 | 1.779881e-61 | -8.615850e-47 |
| Msa0584280 | Msa0649310 | 0.829858 | 4.069360e-55 | -8.615850e-47 |
| Msa0584280 | Msa0651310 | 0.806690 | 7.278562e-50 | -8.615850e-47 |
| Msa0584280 | Msa0659300 | -0.814040 | 1.886083e-51 | -8.615850e-47 |
| Msa0584280 | Msa0659520 | 0.803230 | 3.849430e-49 | -8.615850e-47 |
| Msa0584280 | Msa0662120 | 0.826761 | 2.272093e-54 | -8.615850e-47 |
| Msa0584280 | Msa0665790 | 0.805674 | 1.190849e-49 | -8.615850e-47 |
| Msa0584280 | Msa0667970 | 0.807464 | 4.990764e-50 | -8.615850e-47 |
| Msa0584280 | Msa0675010 | 0.849824 | 2.522701e-60 | -8.615850e-47 |
| Msa0584280 | Msa0676100 | 0.857193 | 1.927847e-62 | -8.615850e-47 |
| Msa0584280 | Msa0679780 | 0.864045 | 1.613018e-64 | -8.615850e-47 |
| Msa0584280 | Msa0681210 | 0.911332 | 6.856116e-83 | -8.615850e-47 |
| Msa0584280 | Msa0685890 | 0.817566 | 3.086128e-52 | -8.615850e-47 |
| Msa0584280 | Msa0690350 | 0.813626 | 2.326704e-51 | -8.615850e-47 |
| Msa0584280 | Msa0693400 | 0.825165 | 5.440035e-54 | -8.615850e-47 |
| Msa0584280 | Msa0693500 | 0.802646 | 5.082002e-49 | -8.615850e-47 |
| Msa0584280 | Msa0697600 | 0.811436 | 7.009397e-51 | -8.615850e-47 |
| Msa0584280 | Msa0704220 | 0.824655 | 7.177022e-54 | -8.615850e-47 |
| Msa0584280 | Msa0719340 | 0.805570 | 1.252607e-49 | -8.615850e-47 |
| Msa0584280 | Msa0733000 | 0.807434 | 5.064753e-50 | -8.615850e-47 |
| Msa0584280 | Msa0738880 | 0.821072 | 4.903143e-53 | -8.615850e-47 |
| Msa0584280 | Msa0748330 | 0.837561 | 4.832503e-57 | -8.615850e-47 |
| Msa0584280 | Msa0752580 | 0.807544 | 4.798698e-50 | -8.615850e-47 |
| Msa0584280 | Msa0760890 | 0.825049 | 5.793298e-54 | -8.615850e-47 |
| Msa0584280 | Msa0769830 | 0.835135 | 2.000687e-56 | -8.615850e-47 |
| Msa0584280 | Msa0772150 | 0.806730 | 7.137506e-50 | -8.615850e-47 |
| Msa0584280 | Msa0775580 | 0.836418 | 9.466359e-57 | -8.615850e-47 |
| Msa0584280 | Msa0783270 | 0.810269 | 1.253835e-50 | -8.615850e-47 |
| Msa0584280 | Msa0783280 | 0.810914 | 9.093847e-51 | -8.615850e-47 |
| Msa0584280 | Msa0786100 | 0.808810 | 2.578936e-50 | -8.615850e-47 |
| Msa0584280 | Msa0790640 | 0.850088 | 2.128105e-60 | -8.615850e-47 |
| Msa0584280 | Msa0806720 | 0.860035 | 2.733601e-63 | -8.615850e-47 |
| Msa0584280 | Msa0806760 | 0.857343 | 1.741221e-62 | -8.615850e-47 |
| Msa0584280 | Msa0812970 | 0.817727 | 2.838941e-52 | -8.615850e-47 |
| Msa0584280 | Msa0813030 | 0.818016 | 2.442066e-52 | -8.615850e-47 |
| Msa0584280 | Msa0819320 | 0.826329 | 2.880199e-54 | -8.615850e-47 |
| Msa0584280 | Msa0819370 | 0.828073 | 1.100909e-54 | -8.615850e-47 |
| Msa0584280 | Msa0828570 | 0.821158 | 4.685393e-53 | -8.615850e-47 |
| Msa0584280 | Msa0834460 | 0.801369 | 9.302598e-49 | -8.615850e-47 |
| Msa0584280 | Msa0848760 | 0.838396 | 2.948023e-57 | -8.615850e-47 |
| Msa0584280 | Msa0853480 | 0.851648 | 7.741683e-61 | -8.615850e-47 |
| Msa0584280 | Msa0853500 | 0.836133 | 1.118419e-56 | -8.615850e-47 |
| Msa0584280 | Msa0873830 | 0.801344 | 9.410894e-49 | -8.615850e-47 |
| Msa0584280 | Msa0879650 | 0.801107 | 1.052322e-48 | -8.615850e-47 |
| Msa0584280 | Msa0882700 | 0.826769 | 2.261547e-54 | -8.615850e-47 |
| Msa0584280 | Msa0899700 | 0.835463 | 1.653426e-56 | -8.615850e-47 |
| Msa0584280 | Msa0899730 | 0.814213 | 1.727913e-51 | -8.615850e-47 |
| Msa0584280 | Msa0934830 | 0.815506 | 8.927947e-52 | -8.615850e-47 |
| Msa0584280 | Msa0936690 | 0.800758 | 1.240305e-48 | -8.615850e-47 |
| Msa0584280 | Msa0944690 | 0.840025 | 1.114394e-57 | -8.615850e-47 |
| Msa0584280 | Msa0945960 | 0.845262 | 4.533341e-59 | -8.615850e-47 |
| Msa0584280 | Msa0950410 | 0.806463 | 8.125835e-50 | -8.615850e-47 |
| Msa0584280 | Msa0964650 | 0.801090 | 1.061072e-48 | -8.615850e-47 |
| Msa0584280 | Msa0964680 | 0.837719 | 4.403736e-57 | -8.615850e-47 |
| Msa0584280 | Msa0968780 | 0.830157 | 3.440354e-55 | -8.615850e-47 |
| Msa0584280 | Msa0971860 | 0.831362 | 1.742345e-55 | -8.615850e-47 |
| Msa0584280 | Msa0984000 | 0.877923 | 4.254319e-69 | -8.615850e-47 |
| Msa0584280 | Msa1004210 | 0.841200 | 5.488324e-58 | -8.615850e-47 |
| Msa0584280 | Msa1014350 | 0.818468 | 1.929692e-52 | -8.615850e-47 |
| Msa0584280 | Msa1016110 | 0.803348 | 3.639508e-49 | -8.615850e-47 |
| Msa0584280 | Msa1026610 | 0.825628 | 4.224870e-54 | -8.615850e-47 |
| Msa0584280 | Msa1034930 | 0.802166 | 6.381735e-49 | -8.615850e-47 |
| Msa0584280 | Msa1036250 | 0.854280 | 1.367556e-61 | -8.615850e-47 |
| Msa0584280 | Msa1040730 | -0.804599 | 1.999000e-49 | -8.615850e-47 |
| Msa0584280 | Msa1044040 | 0.805495 | 1.298408e-49 | -8.615850e-47 |
| Msa0584280 | Msa1046610 | 0.837782 | 4.242458e-57 | -8.615850e-47 |
| Msa0584280 | Msa1055360 | 0.869011 | 4.260997e-66 | -8.615850e-47 |
| Msa0584280 | Msa1073500 | 0.824248 | 8.944957e-54 | -8.615850e-47 |
| Msa0584280 | Msa1076520 | 0.870349 | 1.560394e-66 | -8.615850e-47 |
| Msa0584280 | Msa1082150 | 0.863523 | 2.342318e-64 | -8.615850e-47 |
| Msa0584280 | Msa1093390 | 0.842896 | 1.954622e-58 | -8.615850e-47 |
| Msa0584280 | Msa1105850 | 0.808147 | 3.571847e-50 | -8.615850e-47 |
| Msa0584280 | Msa1115830 | 0.822878 | 1.871872e-53 | -8.615850e-47 |
| Msa0584280 | Msa1122720 | 0.831137 | 1.979769e-55 | -8.615850e-47 |
| Msa0584280 | Msa1138450 | 0.814922 | 1.203561e-51 | -8.615850e-47 |
| Msa0584280 | Msa1142860 | -0.806679 | 7.317661e-50 | -8.615850e-47 |
| Msa0584280 | Msa1144730 | 0.872870 | 2.279904e-67 | -8.615850e-47 |
| Msa0584280 | Msa1144950 | 0.818054 | 2.394636e-52 | -8.615850e-47 |
| Msa0584280 | Msa1151820 | 0.839112 | 1.925372e-57 | -8.615850e-47 |
| Msa0584280 | Msa1157730 | 0.810284 | 1.244469e-50 | -8.615850e-47 |
| Msa0584280 | Msa1173380 | 0.867037 | 1.837721e-65 | -8.615850e-47 |
| Msa0584280 | Msa1177240 | 0.801436 | 9.011780e-49 | -8.615850e-47 |
| Msa0584280 | Msa1177620 | 0.823168 | 1.601647e-53 | -8.615850e-47 |
| Msa0584280 | Msa1182800 | 0.827049 | 1.939035e-54 | -8.615850e-47 |
| Msa0584280 | Msa1182830 | 0.875021 | 4.278227e-68 | -8.615850e-47 |
| Msa0584280 | Msa1191390 | 0.816943 | 4.260871e-52 | -8.615850e-47 |
| Msa0584280 | Msa1198450 | 0.810054 | 1.395007e-50 | -8.615850e-47 |
| Msa0584280 | Msa1206760 | 0.801059 | 1.076345e-48 | -8.615850e-47 |
| Msa0584280 | Msa1207480 | -0.801001 | 1.106004e-48 | -8.615850e-47 |
| Msa0584280 | Msa1211300 | 0.804686 | 1.917310e-49 | -8.615850e-47 |
| Msa0584280 | Msa1211390 | 0.822238 | 2.635813e-53 | -8.615850e-47 |
| Msa0584280 | Msa1219780 | -0.814084 | 1.844213e-51 | -8.615850e-47 |
| Msa0584280 | Msa1222030 | -0.814681 | 1.361237e-51 | -8.615850e-47 |
| Msa0584280 | Msa1237260 | 0.819106 | 1.382279e-52 | -8.615850e-47 |
| Msa0584280 | Msa1238730 | 0.813681 | 2.263165e-51 | -8.615850e-47 |
| Msa0584280 | Msa1241820 | 0.813631 | 2.321093e-51 | -8.615850e-47 |
| Msa0584280 | Msa1245120 | -0.847426 | 1.164910e-59 | -8.615850e-47 |
| Msa0584280 | Msa1255020 | 0.803577 | 3.261470e-49 | -8.615850e-47 |
| Msa0584280 | Msa1258280 | 0.812797 | 3.538139e-51 | -8.615850e-47 |
| Msa0584280 | Msa1272950 | 0.870042 | 1.967578e-66 | -8.615850e-47 |
| Msa0584280 | Msa1278420 | 0.816136 | 6.459997e-52 | -8.615850e-47 |
| Msa0584280 | Msa1293050 | 0.856813 | 2.496487e-62 | -8.615850e-47 |
| Msa0584280 | Msa1306190 | 0.899838 | 1.333164e-77 | -8.615850e-47 |
| Msa0584280 | Msa1306200 | 0.888555 | 5.320650e-73 | -8.615850e-47 |
| Msa0584280 | Msa1317710 | 0.832771 | 7.813974e-56 | -8.615850e-47 |
| Msa0584280 | Msa1320380 | 0.815042 | 1.131837e-51 | -8.615850e-47 |
| Msa0584280 | Msa1326000 | 0.801584 | 8.405029e-49 | -8.615850e-47 |
| Msa0584280 | Msa1326400 | 0.826017 | 3.417541e-54 | -8.615850e-47 |
| Msa0584280 | Msa1335970 | -0.803425 | 3.507163e-49 | -8.615850e-47 |
| Msa0584280 | Msa1338590 | 0.820892 | 5.393935e-53 | -8.615850e-47 |
| Msa0584280 | Msa1349810 | 0.859188 | 4.916763e-63 | -8.615850e-47 |
| Msa0584280 | Msa1354090 | 0.833804 | 4.320526e-56 | -8.615850e-47 |
| Msa0584280 | Msa1358340 | 0.832286 | 1.030923e-55 | -8.615850e-47 |
| Msa0584280 | Msa1359620 | 0.812804 | 3.525092e-51 | -8.615850e-47 |
| Msa0584280 | Msa1359890 | 0.848728 | 5.094828e-60 | -8.615850e-47 |
| Msa0584280 | Msa1361190 | 0.877804 | 4.684960e-69 | -8.615850e-47 |
| Msa0584280 | Msa1361200 | 0.823797 | 1.141207e-53 | -8.615850e-47 |
| Msa0584280 | Msa1378460 | 0.818763 | 1.654355e-52 | -8.615850e-47 |
| Msa0584280 | Msa1378470 | 0.833294 | 5.793209e-56 | -8.615850e-47 |
| Msa0584280 | Msa1394900 | 0.833813 | 4.298598e-56 | -8.615850e-47 |
| Msa0584280 | Msa1403700 | 0.808711 | 2.707752e-50 | -8.615850e-47 |
| Msa0584280 | Msa1406020 | 0.822882 | 1.867629e-53 | -8.615850e-47 |
| Msa0584280 | Msa1407210 | -0.812045 | 5.164203e-51 | -8.615850e-47 |
| Msa0584280 | Msa1418200 | 0.802284 | 6.035264e-49 | -8.615850e-47 |
| Msa0584280 | Msa1421870 | 0.818311 | 2.094576e-52 | -8.615850e-47 |
| Msa0584280 | Msa1422890 | 0.849722 | 2.694845e-60 | -8.615850e-47 |
| Msa0584280 | Msa1431240 | 0.804104 | 2.535856e-49 | -8.615850e-47 |
| Msa0584280 | Msa1434660 | 0.838451 | 2.853654e-57 | -8.615850e-47 |
| Msa0584280 | Msa1439070 | 0.821647 | 3.611891e-53 | -8.615850e-47 |
| Msa0584280 | Msa1439120 | 0.848900 | 4.564661e-60 | -8.615850e-47 |
| Msa0584280 | Msa1440180 | 0.812572 | 3.963330e-51 | -8.615850e-47 |
| Msa0584280 | Msa1440220 | 0.835004 | 2.159960e-56 | -8.615850e-47 |
| Msa0584280 | Msa1443550 | 0.804643 | 1.957477e-49 | -8.615850e-47 |
| Msa0584280 | Msa1449740 | 0.813526 | 2.448414e-51 | -8.615850e-47 |
| Msa0584280 | Msa1455660 | 0.845192 | 4.734384e-59 | -8.615850e-47 |
| Msa0584280 | Msa1458920 | 0.802441 | 5.601721e-49 | -8.615850e-47 |
| Msa0584280 | Msa1459540 | 0.827578 | 1.448191e-54 | -8.615850e-47 |
| Msa0584280 | Msa1460310 | -0.826286 | 2.949150e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584280 | MtrunA17_Chr4g0027171 | 95.385 | 195 | 9 | 0 | 4 | 198 | 2 | 196 | 7.17e-140 | 388 |
| Msa0584280 | MtrunA17_Chr2g0320881 | 54.286 | 175 | 68 | 5 | 17 | 184 | 8 | 177 | 5.69e-57 | 178 |
| Msa0584280 | MtrunA17_Chr4g0056791 | 43.077 | 130 | 58 | 2 | 71 | 198 | 57 | 172 | 4.58e-28 | 103 |
| Msa0584280 | MtrunA17_Chr5g0398651 | 51.724 | 87 | 42 | 0 | 71 | 157 | 26 | 112 | 9.25e-25 | 93.6 |
| Msa0584280 | MtrunA17_Chr5g0398661 | 40.741 | 81 | 48 | 0 | 74 | 154 | 117 | 197 | 8.42e-15 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584280 | AT2G27830.1 | 49.495 | 198 | 90 | 6 | 1 | 196 | 1 | 190 | 6.25e-51 | 163 |
| Msa0584280 | AT4G22758.1 | 38.462 | 91 | 54 | 1 | 70 | 160 | 119 | 207 | 9.02e-13 | 65.5 |
| Msa0584280 | AT1G70780.1 | 30.328 | 122 | 79 | 3 | 73 | 190 | 16 | 135 | 1.05e-11 | 60.5 |
Find 60 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTTTCTTCAAGCTTCTT+TGG | 0.205520 | 4_2:+3466024 | None:intergenic |
| ATAAATAAACAATAAATTAT+TGG | 0.205872 | 4_2:+3465826 | None:intergenic |
| AATGAGAAGCTTAAGGAAAT+TGG | 0.265022 | 4_2:-3466069 | Msa0584280:CDS |
| GCCGACGAAGTTACTCATTA+AGG | 0.295975 | 4_2:-3466494 | Msa0584280:CDS |
| GAGTAACTTCGTCGGCTGTC+TGG | 0.327050 | 4_2:+3466501 | None:intergenic |
| GCTTCCTTCGACGGCAAGAT+TGG | 0.327598 | 4_2:+3466361 | None:intergenic |
| TAAACGACGCCGTTACGTTA+TGG | 0.389603 | 4_2:+3465989 | None:intergenic |
| AGATAGAAATGAGAAGCTTA+AGG | 0.392238 | 4_2:-3466076 | Msa0584280:CDS |
| GACTATGCCGGACCTTGTTC+AGG | 0.396562 | 4_2:-3466569 | Msa0584280:CDS |
| ACAAGGTCCGGCATAGTCTT+TGG | 0.407621 | 4_2:+3466574 | None:intergenic |
| ATTTCTTGATATGAAATGAT+TGG | 0.413368 | 4_2:-3465906 | Msa0584280:exon |
| ATTTGATAGCGGAGGCTGTA+AGG | 0.439277 | 4_2:-3466408 | Msa0584280:CDS |
| CTCGCCTGTGAGTTTCTACA+TGG | 0.441889 | 4_2:+3466671 | None:intergenic |
| GAGATACTAGTAACTGTTGT+TGG | 0.446554 | 4_2:+3465848 | None:intergenic |
| GGGTTGGAGAAGATGAGGTT+TGG | 0.453885 | 4_2:+3466801 | None:intergenic |
| ACTCATTAAGGTTACGATGA+TGG | 0.455220 | 4_2:-3466482 | Msa0584280:CDS |
| CTCATTAAGGTTACGATGAT+GGG | 0.455912 | 4_2:-3466481 | Msa0584280:CDS |
| GAAGTGTGAGCCTCTGACTC+TGG | 0.469760 | 4_2:+3466910 | None:intergenic |
| TTTCTTGATATGAAATGATT+GGG | 0.473375 | 4_2:-3465905 | Msa0584280:exon |
| AGTAACTTCGTCGGCTGTCT+GGG | 0.474432 | 4_2:+3466502 | None:intergenic |
| ATAACCAGACAAAGCGAGAA+TGG | 0.480282 | 4_2:+3466854 | None:intergenic |
| GAGTTTCTACATGGCTGTTA+CGG | 0.489148 | 4_2:+3466680 | None:intergenic |
| ATCTATAGTGAGGAAAATCA+AGG | 0.497119 | 4_2:+3466780 | None:intergenic |
| CACGCTTCCTGTCCTGAACA+AGG | 0.509318 | 4_2:+3466557 | None:intergenic |
| TTCCTGTCCTGAACAAGGTC+CGG | 0.516723 | 4_2:+3466562 | None:intergenic |
| GTTACGATGATGGGCAGCCT+TGG | 0.521614 | 4_2:-3466472 | Msa0584280:CDS |
| ATCGACATTAACACTTGCAC+GGG | 0.533383 | 4_2:+3466448 | None:intergenic |
| CGTGCAAGTGTTAATGTCGA+TGG | 0.536743 | 4_2:-3466446 | Msa0584280:CDS |
| ATCAAGGGTTGGAGAAGATG+AGG | 0.542417 | 4_2:+3466796 | None:intergenic |
| CACTGTCCAGTGCAAAACTC+CGG | 0.545078 | 4_2:-3466600 | Msa0584280:CDS |
| CCGGCATAGTCTTTGGCCGC+CGG | 0.545096 | 4_2:+3466581 | None:intergenic |
| AAGCAAGAAGCTTCCTTCGA+CGG | 0.546345 | 4_2:+3466352 | None:intergenic |
| GTAAGGTTGTATGTTAAAGA+AGG | 0.550051 | 4_2:-3466391 | Msa0584280:CDS |
| TTTCTACATGGCTGTTACGG+TGG | 0.550068 | 4_2:+3466683 | None:intergenic |
| CCGTCCAATCTTGCCGTCGA+AGG | 0.553306 | 4_2:-3466365 | Msa0584280:CDS |
| CATCGACATTAACACTTGCA+CGG | 0.553702 | 4_2:+3466447 | None:intergenic |
| GGCAATGACTTCTTCACCAC+CGG | 0.554601 | 4_2:-3466533 | Msa0584280:CDS |
| TGCCGGACCTTGTTCAGGAC+AGG | 0.554914 | 4_2:-3466564 | Msa0584280:CDS |
| AGCTTAAGGAAATTGGATCA+AGG | 0.569028 | 4_2:-3466062 | Msa0584280:CDS |
| CCTTCGACGGCAAGATTGGA+CGG | 0.570300 | 4_2:+3466365 | None:intergenic |
| AGTAACTGTTGTTGGCAGCA+TGG | 0.587933 | 4_2:+3465856 | None:intergenic |
| TACGTTTGAGTTTGACATGG+TGG | 0.593428 | 4_2:+3466711 | None:intergenic |
| TTAACACTTGCACGGGACCA+AGG | 0.594751 | 4_2:+3466455 | None:intergenic |
| TAGTGAGGAAAATCAAGGGT+TGG | 0.598377 | 4_2:+3466785 | None:intergenic |
| CCGGCGGCCAAAGACTATGC+CGG | 0.600487 | 4_2:-3466581 | Msa0584280:CDS |
| ATGTCGATGGAATCGACGGT+TGG | 0.625000 | 4_2:-3466433 | Msa0584280:CDS |
| ACAGCCATGTAGAAACTCAC+AGG | 0.626683 | 4_2:-3466675 | Msa0584280:CDS |
| AAGCTTGAAGAAAGTGACAA+TGG | 0.627431 | 4_2:-3466018 | Msa0584280:CDS |
| ACCTTAATGAGTAACTTCGT+CGG | 0.631958 | 4_2:+3466493 | None:intergenic |
| TATCTGAAATATCTATAGTG+AGG | 0.634051 | 4_2:+3466770 | None:intergenic |
| GTTAATGTCGATGGAATCGA+CGG | 0.637103 | 4_2:-3466437 | Msa0584280:CDS |
| TCTATAGTGAGGAAAATCAA+GGG | 0.637563 | 4_2:+3466781 | None:intergenic |
| GGTTGGAGATTTGATAGCGG+AGG | 0.649039 | 4_2:-3466416 | Msa0584280:CDS |
| CTTGAAGAAAGTGACAATGG+TGG | 0.660090 | 4_2:-3466015 | Msa0584280:CDS |
| TGTTCAGGACAGGAAGCGTG+CGG | 0.669790 | 4_2:-3466554 | Msa0584280:CDS |
| CATGTAGAAACTCACAGGCG+AGG | 0.672087 | 4_2:-3466670 | Msa0584280:CDS |
| TTGTTGGCAGCATGGACAAG+TGG | 0.673750 | 4_2:+3465864 | None:intergenic |
| TGGTGGAGACCATAACGTAA+CGG | 0.684404 | 4_2:-3465998 | Msa0584280:CDS |
| TGTCCAGTGCAAAACTCCGG+CGG | 0.689368 | 4_2:-3466597 | Msa0584280:CDS |
| GACGGTTGGAGATTTGATAG+CGG | 0.709738 | 4_2:-3466419 | Msa0584280:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAGTTATTATTTTTTGT+TGG | - | chr4_2:3466502-3466521 | Msa0584280:CDS | 10.0% |
| !!! | ATTTAGTTATTATTTTTTGT+TGG | - | chr4_2:3466502-3466521 | Msa0584280:CDS | 10.0% |
| !!! | AAAATTCACTTGTTAATAAA+TGG | + | chr4_2:3466373-3466392 | None:intergenic | 15.0% |
| !!! | AAAATTCACTTGTTAATAAA+TGG | + | chr4_2:3466373-3466392 | None:intergenic | 15.0% |
| !!! | TAGTTATTATTTTTTGTTGG+AGG | - | chr4_2:3466505-3466524 | Msa0584280:CDS | 20.0% |
| !!! | AGTTATTATTTTTTGTTGGA+GGG | - | chr4_2:3466506-3466525 | Msa0584280:CDS | 20.0% |
| !! | ATTTCTTGATATGAAATGAT+TGG | - | chr4_2:3466728-3466747 | Msa0584280:exon | 20.0% |
| !! | TTTCTTGATATGAAATGATT+GGG | - | chr4_2:3466729-3466748 | Msa0584280:five_prime_UTR | 20.0% |
| !!! | TAGTTATTATTTTTTGTTGG+AGG | - | chr4_2:3466505-3466524 | Msa0584280:CDS | 20.0% |
| !!! | AGTTATTATTTTTTGTTGGA+GGG | - | chr4_2:3466506-3466525 | Msa0584280:CDS | 20.0% |
| !! | ATTTCTTGATATGAAATGAT+TGG | - | chr4_2:3466728-3466747 | Msa0584280:exon | 20.0% |
| !! | TTTCTTGATATGAAATGATT+GGG | - | chr4_2:3466729-3466748 | Msa0584280:five_prime_UTR | 20.0% |
| !! | TATCTGAAATATCTATAGTG+AGG | + | chr4_2:3465867-3465886 | None:intergenic | 25.0% |
| ! | TGGACTATGAAAACTAAAAT+TGG | + | chr4_2:3466353-3466372 | None:intergenic | 25.0% |
| !! | TATCTGAAATATCTATAGTG+AGG | + | chr4_2:3465867-3465886 | None:intergenic | 25.0% |
| ! | TGGACTATGAAAACTAAAAT+TGG | + | chr4_2:3466353-3466372 | None:intergenic | 25.0% |
| TCTATAGTGAGGAAAATCAA+GGG | + | chr4_2:3465856-3465875 | None:intergenic | 30.0% | |
| ATCTATAGTGAGGAAAATCA+AGG | + | chr4_2:3465857-3465876 | None:intergenic | 30.0% | |
| ! | ACATGGTGGTATATTTTACA+GGG | + | chr4_2:3465912-3465931 | None:intergenic | 30.0% |
| !! | TTTTACGTTTGAGTTTGACA+TGG | + | chr4_2:3465929-3465948 | None:intergenic | 30.0% |
| ! | GAGAAATCATCATCTTTTCA+TGG | - | chr4_2:3465997-3466016 | Msa0584280:CDS | 30.0% |
| GTAAGGTTGTATGTTAAAGA+AGG | - | chr4_2:3466243-3466262 | Msa0584280:intron | 30.0% | |
| !!! | TTGATTTGTTTTATGTGTGC+AGG | - | chr4_2:3466532-3466551 | Msa0584280:CDS | 30.0% |
| AGATAGAAATGAGAAGCTTA+AGG | - | chr4_2:3466558-3466577 | Msa0584280:CDS | 30.0% | |
| AATGAGAAGCTTAAGGAAAT+TGG | - | chr4_2:3466565-3466584 | Msa0584280:CDS | 30.0% | |
| TCTATAGTGAGGAAAATCAA+GGG | + | chr4_2:3465856-3465875 | None:intergenic | 30.0% | |
| ATCTATAGTGAGGAAAATCA+AGG | + | chr4_2:3465857-3465876 | None:intergenic | 30.0% | |
| ! | ACATGGTGGTATATTTTACA+GGG | + | chr4_2:3465912-3465931 | None:intergenic | 30.0% |
| !! | TTTTACGTTTGAGTTTGACA+TGG | + | chr4_2:3465929-3465948 | None:intergenic | 30.0% |
| ! | GAGAAATCATCATCTTTTCA+TGG | - | chr4_2:3465997-3466016 | Msa0584280:CDS | 30.0% |
| GTAAGGTTGTATGTTAAAGA+AGG | - | chr4_2:3466243-3466262 | Msa0584280:intron | 30.0% | |
| !!! | TTGATTTGTTTTATGTGTGC+AGG | - | chr4_2:3466532-3466551 | Msa0584280:CDS | 30.0% |
| AGATAGAAATGAGAAGCTTA+AGG | - | chr4_2:3466558-3466577 | Msa0584280:CDS | 30.0% | |
| AATGAGAAGCTTAAGGAAAT+TGG | - | chr4_2:3466565-3466584 | Msa0584280:CDS | 30.0% | |
| GTATAAAAATCCAGAGTCAG+AGG | - | chr4_2:3465714-3465733 | Msa0584280:three_prime_UTR | 35.0% | |
| !!! | AGGTTTGGTTTTGTGGTTTA+TGG | + | chr4_2:3465821-3465840 | None:intergenic | 35.0% |
| ! | ATGGTGGTATATTTTACAGG+GGG | + | chr4_2:3465910-3465929 | None:intergenic | 35.0% |
| ! | CATGGTGGTATATTTTACAG+GGG | + | chr4_2:3465911-3465930 | None:intergenic | 35.0% |
| ! | GACATGGTGGTATATTTTAC+AGG | + | chr4_2:3465913-3465932 | None:intergenic | 35.0% |
| ACCTTAATGAGTAACTTCGT+CGG | + | chr4_2:3466144-3466163 | None:intergenic | 35.0% | |
| ACTCATTAAGGTTACGATGA+TGG | - | chr4_2:3466152-3466171 | Msa0584280:intron | 35.0% | |
| CTCATTAAGGTTACGATGAT+GGG | - | chr4_2:3466153-3466172 | Msa0584280:intron | 35.0% | |
| ACAACTGAGTTATGCTAACT+AGG | - | chr4_2:3466440-3466459 | Msa0584280:CDS | 35.0% | |
| ACTAGGACAACGTGAATATT+AGG | - | chr4_2:3466457-3466476 | Msa0584280:CDS | 35.0% | |
| AGCTTAAGGAAATTGGATCA+AGG | - | chr4_2:3466572-3466591 | Msa0584280:CDS | 35.0% | |
| TCACTTTCTTCAAGCTTCTT+TGG | + | chr4_2:3466613-3466632 | None:intergenic | 35.0% | |
| AAGCTTGAAGAAAGTGACAA+TGG | - | chr4_2:3466616-3466635 | Msa0584280:CDS | 35.0% | |
| ! | CAAGTTGAAAAAGTGAGCAA+AGG | - | chr4_2:3466682-3466701 | Msa0584280:CDS | 35.0% |
| ! | GAAAAAGTGAGCAAAGGTTT+TGG | - | chr4_2:3466688-3466707 | Msa0584280:CDS | 35.0% |
| !! | GCAAAGGTTTTGGTCTTTTA+AGG | - | chr4_2:3466698-3466717 | Msa0584280:CDS | 35.0% |
| GAGATACTAGTAACTGTTGT+TGG | + | chr4_2:3466789-3466808 | None:intergenic | 35.0% | |
| GTATAAAAATCCAGAGTCAG+AGG | - | chr4_2:3465714-3465733 | Msa0584280:three_prime_UTR | 35.0% | |
| !!! | AGGTTTGGTTTTGTGGTTTA+TGG | + | chr4_2:3465821-3465840 | None:intergenic | 35.0% |
| ! | ATGGTGGTATATTTTACAGG+GGG | + | chr4_2:3465910-3465929 | None:intergenic | 35.0% |
| ! | CATGGTGGTATATTTTACAG+GGG | + | chr4_2:3465911-3465930 | None:intergenic | 35.0% |
| ! | GACATGGTGGTATATTTTAC+AGG | + | chr4_2:3465913-3465932 | None:intergenic | 35.0% |
| ACCTTAATGAGTAACTTCGT+CGG | + | chr4_2:3466144-3466163 | None:intergenic | 35.0% | |
| ACTCATTAAGGTTACGATGA+TGG | - | chr4_2:3466152-3466171 | Msa0584280:intron | 35.0% | |
| CTCATTAAGGTTACGATGAT+GGG | - | chr4_2:3466153-3466172 | Msa0584280:intron | 35.0% | |
| ACAACTGAGTTATGCTAACT+AGG | - | chr4_2:3466440-3466459 | Msa0584280:CDS | 35.0% | |
| ACTAGGACAACGTGAATATT+AGG | - | chr4_2:3466457-3466476 | Msa0584280:CDS | 35.0% | |
| AGCTTAAGGAAATTGGATCA+AGG | - | chr4_2:3466572-3466591 | Msa0584280:CDS | 35.0% | |
| TCACTTTCTTCAAGCTTCTT+TGG | + | chr4_2:3466613-3466632 | None:intergenic | 35.0% | |
| AAGCTTGAAGAAAGTGACAA+TGG | - | chr4_2:3466616-3466635 | Msa0584280:CDS | 35.0% | |
| ! | CAAGTTGAAAAAGTGAGCAA+AGG | - | chr4_2:3466682-3466701 | Msa0584280:CDS | 35.0% |
| ! | GAAAAAGTGAGCAAAGGTTT+TGG | - | chr4_2:3466688-3466707 | Msa0584280:CDS | 35.0% |
| !! | GCAAAGGTTTTGGTCTTTTA+AGG | - | chr4_2:3466698-3466717 | Msa0584280:CDS | 35.0% |
| GAGATACTAGTAACTGTTGT+TGG | + | chr4_2:3466789-3466808 | None:intergenic | 35.0% | |
| ! | TTTTCCATTCTCGCTTTGTC+TGG | - | chr4_2:3465776-3465795 | Msa0584280:three_prime_UTR | 40.0% |
| ATAACCAGACAAAGCGAGAA+TGG | + | chr4_2:3465783-3465802 | None:intergenic | 40.0% | |
| !!! | GAAGATGAGGTTTGGTTTTG+TGG | + | chr4_2:3465828-3465847 | None:intergenic | 40.0% |
| TAGTGAGGAAAATCAAGGGT+TGG | + | chr4_2:3465852-3465871 | None:intergenic | 40.0% | |
| ! | TACGTTTGAGTTTGACATGG+TGG | + | chr4_2:3465926-3465945 | None:intergenic | 40.0% |
| GAGTTTCTACATGGCTGTTA+CGG | + | chr4_2:3465957-3465976 | None:intergenic | 40.0% | |
| ATCGACATTAACACTTGCAC+GGG | + | chr4_2:3466189-3466208 | None:intergenic | 40.0% | |
| CATCGACATTAACACTTGCA+CGG | + | chr4_2:3466190-3466209 | None:intergenic | 40.0% | |
| GTTAATGTCGATGGAATCGA+CGG | - | chr4_2:3466197-3466216 | Msa0584280:intron | 40.0% | |
| CTTGAAGAAAGTGACAATGG+TGG | - | chr4_2:3466619-3466638 | Msa0584280:CDS | 40.0% | |
| !!! | GCTCACTTTTTCAACTTGTC+TGG | + | chr4_2:3466680-3466699 | None:intergenic | 40.0% |
| ! | TTTTCCATTCTCGCTTTGTC+TGG | - | chr4_2:3465776-3465795 | Msa0584280:three_prime_UTR | 40.0% |
| ATAACCAGACAAAGCGAGAA+TGG | + | chr4_2:3465783-3465802 | None:intergenic | 40.0% | |
| !!! | GAAGATGAGGTTTGGTTTTG+TGG | + | chr4_2:3465828-3465847 | None:intergenic | 40.0% |
| TAGTGAGGAAAATCAAGGGT+TGG | + | chr4_2:3465852-3465871 | None:intergenic | 40.0% | |
| ! | TACGTTTGAGTTTGACATGG+TGG | + | chr4_2:3465926-3465945 | None:intergenic | 40.0% |
| GAGTTTCTACATGGCTGTTA+CGG | + | chr4_2:3465957-3465976 | None:intergenic | 40.0% | |
| ATCGACATTAACACTTGCAC+GGG | + | chr4_2:3466189-3466208 | None:intergenic | 40.0% | |
| CATCGACATTAACACTTGCA+CGG | + | chr4_2:3466190-3466209 | None:intergenic | 40.0% | |
| GTTAATGTCGATGGAATCGA+CGG | - | chr4_2:3466197-3466216 | Msa0584280:intron | 40.0% | |
| CTTGAAGAAAGTGACAATGG+TGG | - | chr4_2:3466619-3466638 | Msa0584280:CDS | 40.0% | |
| !!! | GCTCACTTTTTCAACTTGTC+TGG | + | chr4_2:3466680-3466699 | None:intergenic | 40.0% |
| ATCAAGGGTTGGAGAAGATG+AGG | + | chr4_2:3465841-3465860 | None:intergenic | 45.0% | |
| TTTCTACATGGCTGTTACGG+TGG | + | chr4_2:3465954-3465973 | None:intergenic | 45.0% | |
| ACAGCCATGTAGAAACTCAC+AGG | - | chr4_2:3465959-3465978 | Msa0584280:CDS | 45.0% | |
| GCCGACGAAGTTACTCATTA+AGG | - | chr4_2:3466140-3466159 | Msa0584280:intron | 45.0% | |
| CGTGCAAGTGTTAATGTCGA+TGG | - | chr4_2:3466188-3466207 | Msa0584280:intron | 45.0% | |
| GACGGTTGGAGATTTGATAG+CGG | - | chr4_2:3466215-3466234 | Msa0584280:intron | 45.0% | |
| !! | ATTTGATAGCGGAGGCTGTA+AGG | - | chr4_2:3466226-3466245 | Msa0584280:intron | 45.0% |
| AAGCAAGAAGCTTCCTTCGA+CGG | + | chr4_2:3466285-3466304 | None:intergenic | 45.0% | |
| TGGTGGAGACCATAACGTAA+CGG | - | chr4_2:3466636-3466655 | Msa0584280:CDS | 45.0% | |
| TAAACGACGCCGTTACGTTA+TGG | + | chr4_2:3466648-3466667 | None:intergenic | 45.0% | |
| AGTAACTGTTGTTGGCAGCA+TGG | + | chr4_2:3466781-3466800 | None:intergenic | 45.0% | |
| ATCAAGGGTTGGAGAAGATG+AGG | + | chr4_2:3465841-3465860 | None:intergenic | 45.0% | |
| TTTCTACATGGCTGTTACGG+TGG | + | chr4_2:3465954-3465973 | None:intergenic | 45.0% | |
| ACAGCCATGTAGAAACTCAC+AGG | - | chr4_2:3465959-3465978 | Msa0584280:CDS | 45.0% | |
| GCCGACGAAGTTACTCATTA+AGG | - | chr4_2:3466140-3466159 | Msa0584280:intron | 45.0% | |
| CGTGCAAGTGTTAATGTCGA+TGG | - | chr4_2:3466188-3466207 | Msa0584280:intron | 45.0% | |
| GACGGTTGGAGATTTGATAG+CGG | - | chr4_2:3466215-3466234 | Msa0584280:intron | 45.0% | |
| !! | ATTTGATAGCGGAGGCTGTA+AGG | - | chr4_2:3466226-3466245 | Msa0584280:intron | 45.0% |
| AAGCAAGAAGCTTCCTTCGA+CGG | + | chr4_2:3466285-3466304 | None:intergenic | 45.0% | |
| TGGTGGAGACCATAACGTAA+CGG | - | chr4_2:3466636-3466655 | Msa0584280:CDS | 45.0% | |
| TAAACGACGCCGTTACGTTA+TGG | + | chr4_2:3466648-3466667 | None:intergenic | 45.0% | |
| AGTAACTGTTGTTGGCAGCA+TGG | + | chr4_2:3466781-3466800 | None:intergenic | 45.0% | |
| !! | ATAAATAAACAATAAATTAT+TGG | + | chr4_2:3466811-3466830 | None:intergenic | 5.0% |
| !! | ATAAATAAACAATAAATTAT+TGG | + | chr4_2:3466811-3466830 | None:intergenic | 5.0% |
| GGGTTGGAGAAGATGAGGTT+TGG | + | chr4_2:3465836-3465855 | None:intergenic | 50.0% | |
| CTCGCCTGTGAGTTTCTACA+TGG | + | chr4_2:3465966-3465985 | None:intergenic | 50.0% | |
| CATGTAGAAACTCACAGGCG+AGG | - | chr4_2:3465964-3465983 | Msa0584280:CDS | 50.0% | |
| CACTGTCCAGTGCAAAACTC+CGG | - | chr4_2:3466034-3466053 | Msa0584280:CDS | 50.0% | |
| ACAAGGTCCGGCATAGTCTT+TGG | + | chr4_2:3466063-3466082 | None:intergenic | 50.0% | |
| TTCCTGTCCTGAACAAGGTC+CGG | + | chr4_2:3466075-3466094 | None:intergenic | 50.0% | |
| GGCAATGACTTCTTCACCAC+CGG | - | chr4_2:3466101-3466120 | Msa0584280:intron | 50.0% | |
| TGTCTGGGAAAAAACTCCGG+TGG | + | chr4_2:3466120-3466139 | None:intergenic | 50.0% | |
| GGCTGTCTGGGAAAAAACTC+CGG | + | chr4_2:3466123-3466142 | None:intergenic | 50.0% | |
| ! | AGTAACTTCGTCGGCTGTCT+GGG | + | chr4_2:3466135-3466154 | None:intergenic | 50.0% |
| TTAACACTTGCACGGGACCA+AGG | + | chr4_2:3466182-3466201 | None:intergenic | 50.0% | |
| ATGTCGATGGAATCGACGGT+TGG | - | chr4_2:3466201-3466220 | Msa0584280:intron | 50.0% | |
| !! | GGTTGGAGATTTGATAGCGG+AGG | - | chr4_2:3466218-3466237 | Msa0584280:intron | 50.0% |
| TTGTTGGCAGCATGGACAAG+TGG | + | chr4_2:3466773-3466792 | None:intergenic | 50.0% | |
| GGGTTGGAGAAGATGAGGTT+TGG | + | chr4_2:3465836-3465855 | None:intergenic | 50.0% | |
| CTCGCCTGTGAGTTTCTACA+TGG | + | chr4_2:3465966-3465985 | None:intergenic | 50.0% | |
| CATGTAGAAACTCACAGGCG+AGG | - | chr4_2:3465964-3465983 | Msa0584280:CDS | 50.0% | |
| CACTGTCCAGTGCAAAACTC+CGG | - | chr4_2:3466034-3466053 | Msa0584280:CDS | 50.0% | |
| ACAAGGTCCGGCATAGTCTT+TGG | + | chr4_2:3466063-3466082 | None:intergenic | 50.0% | |
| TTCCTGTCCTGAACAAGGTC+CGG | + | chr4_2:3466075-3466094 | None:intergenic | 50.0% | |
| GGCAATGACTTCTTCACCAC+CGG | - | chr4_2:3466101-3466120 | Msa0584280:intron | 50.0% | |
| TGTCTGGGAAAAAACTCCGG+TGG | + | chr4_2:3466120-3466139 | None:intergenic | 50.0% | |
| GGCTGTCTGGGAAAAAACTC+CGG | + | chr4_2:3466123-3466142 | None:intergenic | 50.0% | |
| ! | AGTAACTTCGTCGGCTGTCT+GGG | + | chr4_2:3466135-3466154 | None:intergenic | 50.0% |
| TTAACACTTGCACGGGACCA+AGG | + | chr4_2:3466182-3466201 | None:intergenic | 50.0% | |
| ATGTCGATGGAATCGACGGT+TGG | - | chr4_2:3466201-3466220 | Msa0584280:intron | 50.0% | |
| !! | GGTTGGAGATTTGATAGCGG+AGG | - | chr4_2:3466218-3466237 | Msa0584280:intron | 50.0% |
| TTGTTGGCAGCATGGACAAG+TGG | + | chr4_2:3466773-3466792 | None:intergenic | 50.0% | |
| GAAGTGTGAGCCTCTGACTC+TGG | + | chr4_2:3465727-3465746 | None:intergenic | 55.0% | |
| TGTCCAGTGCAAAACTCCGG+CGG | - | chr4_2:3466037-3466056 | Msa0584280:CDS | 55.0% | |
| GACTATGCCGGACCTTGTTC+AGG | - | chr4_2:3466065-3466084 | Msa0584280:CDS | 55.0% | |
| CACGCTTCCTGTCCTGAACA+AGG | + | chr4_2:3466080-3466099 | None:intergenic | 55.0% | |
| ! | TGTTCAGGACAGGAAGCGTG+CGG | - | chr4_2:3466080-3466099 | Msa0584280:CDS | 55.0% |
| ! | GAGTAACTTCGTCGGCTGTC+TGG | + | chr4_2:3466136-3466155 | None:intergenic | 55.0% |
| !! | GTTACGATGATGGGCAGCCT+TGG | - | chr4_2:3466162-3466181 | Msa0584280:intron | 55.0% |
| CCTTCGACGGCAAGATTGGA+CGG | + | chr4_2:3466272-3466291 | None:intergenic | 55.0% | |
| GCTTCCTTCGACGGCAAGAT+TGG | + | chr4_2:3466276-3466295 | None:intergenic | 55.0% | |
| GAAGTGTGAGCCTCTGACTC+TGG | + | chr4_2:3465727-3465746 | None:intergenic | 55.0% | |
| TGTCCAGTGCAAAACTCCGG+CGG | - | chr4_2:3466037-3466056 | Msa0584280:CDS | 55.0% | |
| GACTATGCCGGACCTTGTTC+AGG | - | chr4_2:3466065-3466084 | Msa0584280:CDS | 55.0% | |
| CACGCTTCCTGTCCTGAACA+AGG | + | chr4_2:3466080-3466099 | None:intergenic | 55.0% | |
| ! | TGTTCAGGACAGGAAGCGTG+CGG | - | chr4_2:3466080-3466099 | Msa0584280:CDS | 55.0% |
| ! | GAGTAACTTCGTCGGCTGTC+TGG | + | chr4_2:3466136-3466155 | None:intergenic | 55.0% |
| !! | GTTACGATGATGGGCAGCCT+TGG | - | chr4_2:3466162-3466181 | Msa0584280:intron | 55.0% |
| CCTTCGACGGCAAGATTGGA+CGG | + | chr4_2:3466272-3466291 | None:intergenic | 55.0% | |
| GCTTCCTTCGACGGCAAGAT+TGG | + | chr4_2:3466276-3466295 | None:intergenic | 55.0% | |
| TGCCGGACCTTGTTCAGGAC+AGG | - | chr4_2:3466070-3466089 | Msa0584280:CDS | 60.0% | |
| CCGTCCAATCTTGCCGTCGA+AGG | - | chr4_2:3466269-3466288 | Msa0584280:intron | 60.0% | |
| TGCCGGACCTTGTTCAGGAC+AGG | - | chr4_2:3466070-3466089 | Msa0584280:CDS | 60.0% | |
| CCGTCCAATCTTGCCGTCGA+AGG | - | chr4_2:3466269-3466288 | Msa0584280:intron | 60.0% | |
| ! | TGGCCGCCGGAGTTTTGCAC+TGG | + | chr4_2:3466043-3466062 | None:intergenic | 65.0% |
| CCGGCATAGTCTTTGGCCGC+CGG | + | chr4_2:3466056-3466075 | None:intergenic | 65.0% | |
| CCGGCGGCCAAAGACTATGC+CGG | - | chr4_2:3466053-3466072 | Msa0584280:CDS | 65.0% | |
| ! | TGGCCGCCGGAGTTTTGCAC+TGG | + | chr4_2:3466043-3466062 | None:intergenic | 65.0% |
| CCGGCATAGTCTTTGGCCGC+CGG | + | chr4_2:3466056-3466075 | None:intergenic | 65.0% | |
| CCGGCGGCCAAAGACTATGC+CGG | - | chr4_2:3466053-3466072 | Msa0584280:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 3465703 | 3466953 | 3465703 | ID=Msa0584280;Name=Msa0584280 |
| chr4_2 | mRNA | 3465703 | 3466953 | 3465703 | ID=Msa0584280-mRNA-1;Parent=Msa0584280;Name=Msa0584280-mRNA-1;_AED=0.01;_eAED=0.01;_QI=225|1|1|1|1|1|2|212|198 |
| chr4_2 | exon | 3465703 | 3466102 | 3465703 | ID=Msa0584280-mRNA-1:exon:982;Parent=Msa0584280-mRNA-1 |
| chr4_2 | exon | 3466320 | 3466953 | 3466320 | ID=Msa0584280-mRNA-1:exon:981;Parent=Msa0584280-mRNA-1 |
| chr4_2 | five_prime_UTR | 3466729 | 3466953 | 3466729 | ID=Msa0584280-mRNA-1:five_prime_utr;Parent=Msa0584280-mRNA-1 |
| chr4_2 | CDS | 3466320 | 3466728 | 3466320 | ID=Msa0584280-mRNA-1:cds;Parent=Msa0584280-mRNA-1 |
| chr4_2 | CDS | 3465915 | 3466102 | 3465915 | ID=Msa0584280-mRNA-1:cds;Parent=Msa0584280-mRNA-1 |
| chr4_2 | three_prime_UTR | 3465703 | 3465914 | 3465703 | ID=Msa0584280-mRNA-1:three_prime_utr;Parent=Msa0584280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
