AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0944660


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0944660 MtrunA17_Chr6g0461511 99.286 560 4 0 1 560 1 560 0.0 1160
Msa0944660 MtrunA17_Chr6g0461471 63.557 343 119 4 22 360 1 341 1.80e-149 432
Msa0944660 MtrunA17_Chr1g0149501 39.548 177 97 3 374 550 30 196 8.21e-35 132
Msa0944660 MtrunA17_Chr4g0055251 41.892 74 43 0 477 550 3 76 3.91e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0944660 AT5G18200.1 52.695 334 154 2 28 358 16 348 1.05e-130 385

Find 154 sgRNAs with CRISPR-Local

Find 463 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGAAAACAACTGTGATTT+TGG 0.113532 6_3:+21599596 Msa0944660:CDS
GAAGAAAGCTTCGGACTTTA+AGG 0.118306 6_3:+21593849 Msa0944660:CDS
TTTGAGCAAATGAGACTTTC+TGG 0.153740 6_3:-21600240 None:intergenic
GAAAGAACGAATGGTGAATT+AGG 0.182607 6_3:-21593621 None:intergenic
TCATTATATGATGTTATCTT+AGG 0.214283 6_3:+21600408 Msa0944660:three_prime_UTR
GTTGGATGGTGGTGAGGTTT+TGG 0.251730 6_3:+21594050 Msa0944660:CDS
TCAGAATTCAATTACCTCTT+TGG 0.253375 6_3:-21599371 None:intergenic
TCCTAGCCAATCTGATTTAT+AGG 0.268321 6_3:+21600319 Msa0944660:three_prime_UTR
GATTCTTCCAGAAGGAGATT+TGG 0.282702 6_3:-21600198 None:intergenic
CCATTTCATCATCCAATTCA+TGG 0.288659 6_3:-21597282 None:intergenic
CTCGAGAGTATCTGCTGAAT+TGG 0.290913 6_3:+21599493 Msa0944660:CDS
AGAATTAGAAATGGAAAATT+CGG 0.308880 6_3:+21599971 Msa0944660:CDS
CTCTGCACACTTCCATGAAT+TGG 0.309156 6_3:+21597270 Msa0944660:CDS
ATGAACCGAATTGGAAGATT+AGG 0.317682 6_3:+21593974 Msa0944660:CDS
ATCTCTCCCAAATCTCCTTC+TGG 0.323139 6_3:+21600191 Msa0944660:three_prime_UTR
GAAACATTGTTTGGAACAAT+TGG 0.325735 6_3:-21597082 None:intergenic
ATTCTTCCAGAAGGAGATTT+GGG 0.325851 6_3:-21600197 None:intergenic
GCGTTTGCCACCAACGGTTT+TGG 0.330783 6_3:-21593583 None:intergenic
AATCAACTGTTTGGAATGAA+TGG 0.338993 6_3:+21593803 Msa0944660:CDS
CATCCATCACCATTTCTAAC+AGG 0.340093 6_3:-21599717 None:intergenic
TCGCAGTTTCAATTACTTCA+TGG 0.342193 6_3:-21599770 None:intergenic
CAGTAATAGGATCAGAGAAT+TGG 0.347025 6_3:+21594173 Msa0944660:CDS
TTTACCGAAAATCAACTGTT+TGG 0.353650 6_3:+21593794 Msa0944660:CDS
TAGCCGCATCTCTCTGACTT+AGG 0.354258 6_3:+21593450 Msa0944660:five_prime_UTR
TACAAGTGCTTAATGTACTT+TGG 0.359441 6_3:+21600384 Msa0944660:three_prime_UTR
CAAATCTAACCTTTGGTCAT+TGG 0.362322 6_3:-21600361 None:intergenic
ACAAGTGCTTAATGTACTTT+GGG 0.389424 6_3:+21600385 Msa0944660:three_prime_UTR
GCAGCATCCTCAGGCAAAAC+AGG 0.393377 6_3:-21598675 None:intergenic
CTCCTCAAAACCGCCGGATT+CGG 0.396406 6_3:-21594009 None:intergenic
GATGATGGGTTTGTGTTGGA+TGG 0.399424 6_3:+21594036 Msa0944660:CDS
AAAGAACGAATGGTGAATTA+GGG 0.400381 6_3:-21593620 None:intergenic
TGAGTCTATCAAATATGTTC+AGG 0.400935 6_3:+21594203 Msa0944660:CDS
TGAACCGAATTGGAAGATTA+GGG 0.405403 6_3:+21593975 Msa0944660:CDS
AGACGGGCAGAAACATTGTT+TGG 0.406511 6_3:-21597091 None:intergenic
AATGTCTGTAATATGTCTTT+CGG 0.410278 6_3:-21599870 None:intergenic
AAGAAAGCTTCGGACTTTAA+GGG 0.410858 6_3:+21593850 Msa0944660:CDS
TTCCGTTTGATGAACCGAAT+TGG 0.416004 6_3:+21593965 Msa0944660:CDS
CCATGAATTGGATGATGAAA+TGG 0.416074 6_3:+21597282 Msa0944660:CDS
TTCTAGATTAGAATTAGAAA+TGG 0.416916 6_3:+21599962 Msa0944660:CDS
TAGATTAAAAGTGGAACATC+TGG 0.419148 6_3:+21599996 Msa0944660:exon
CATTGAAAGTCCGGTGCATT+CGG 0.421116 6_3:+21594098 Msa0944660:CDS
TTCCAATTCGGTTCATCAAA+CGG 0.423615 6_3:-21593967 None:intergenic
CTGAATTGGGCACGAGCCAT+TGG 0.424435 6_3:+21599507 Msa0944660:CDS
AACAATGTTTCTGCCCGTCT+TGG 0.431095 6_3:+21597094 Msa0944660:CDS
CAGAGCTGGCATACAGTCAT+TGG 0.433137 6_3:+21598583 Msa0944660:CDS
ACTTGTACAAATCTAACCTT+TGG 0.433997 6_3:-21600368 None:intergenic
GGAAGTGTGCAGAGTGATAC+CGG 0.436493 6_3:-21597261 None:intergenic
ACTAGTCCATTGCGTGGTGA+TGG 0.443182 6_3:+21598558 Msa0944660:CDS
GGTGCATTCGGAGCAGTTGT+TGG 0.443840 6_3:+21594110 Msa0944660:CDS
CCTCAGCTGATTCCGACAAC+TGG 0.444495 6_3:+21598621 Msa0944660:CDS
ATCCTTCATATTTCCAAGAC+GGG 0.444712 6_3:-21597107 None:intergenic
GATGGGTTTGTGTTGGATGG+TGG 0.446729 6_3:+21594039 Msa0944660:CDS
TTGAGCAAATGAGACTTTCT+GGG 0.449991 6_3:-21600239 None:intergenic
AGAATCTTTGCAGCATCCTC+AGG 0.453021 6_3:-21598684 None:intergenic
TCATTCTCATAGTCAAATCC+TGG 0.454234 6_3:+21597054 Msa0944660:CDS
AAGTGTTTGCTCAAAGTGTT+TGG 0.455055 6_3:-21593482 None:intergenic
GATGCATTAGCTCGCAAGAC+TGG 0.455880 6_3:+21599654 Msa0944660:CDS
ATTTGGATCTTCTTCCTCAT+CGG 0.456914 6_3:-21593767 None:intergenic
ACAACCCTAATCTTCCAATT+CGG 0.457062 6_3:-21593979 None:intergenic
TGCCCGTCTTGGAAATATGA+AGG 0.460206 6_3:+21597105 Msa0944660:CDS
GGTTGTTGAGAGTCCGAATC+CGG 0.461837 6_3:+21593996 Msa0944660:CDS
ATCAACTGTTTGGAATGAAT+GGG 0.467033 6_3:+21593804 Msa0944660:CDS
GAGCCATTGGGAGAGAGCAC+GGG 0.469261 6_3:+21599520 Msa0944660:CDS
TTTGGATGATGGGTTTGTGT+TGG 0.469528 6_3:+21594032 Msa0944660:CDS
TTGAGATATGGGTTGTTCCC+CGG 0.472936 6_3:+21597242 Msa0944660:CDS
TCGAGAGTATCTGCTGAATT+GGG 0.475872 6_3:+21599494 Msa0944660:CDS
CTATAATCCACAATCTTAGT+TGG 0.475886 6_3:-21599334 None:intergenic
AGCCGCATCTCTCTGACTTA+GGG 0.479326 6_3:+21593451 Msa0944660:five_prime_UTR
GAATTCAATTACCTCTTTGG+TGG 0.480591 6_3:-21599368 None:intergenic
CGTATAATACGAATCCTAGT+AGG 0.484679 6_3:+21593881 Msa0944660:CDS
AGAGGAAGACCTGTTAGAAA+TGG 0.484950 6_3:+21599708 Msa0944660:CDS
AAAACCTCGCCAACATCCTT+CGG 0.485711 6_3:-21594141 None:intergenic
GAGAGATGCGGCTATTTGAA+TGG 0.486842 6_3:-21593441 None:intergenic
TGAATTGGGCACGAGCCATT+GGG 0.487838 6_3:+21599508 Msa0944660:CDS
GAGACTTTCTGGGATTTCAC+AGG 0.490453 6_3:-21600229 None:intergenic
AGCACAGTCAATTAAAACTA+AGG 0.496819 6_3:-21600025 None:intergenic
CGAGCCATTGGGAGAGAGCA+CGG 0.499186 6_3:+21599519 Msa0944660:CDS
TTACAGGCACTTGATCTTGG+AGG 0.500262 6_3:+21598465 Msa0944660:intron
GTTTGTGTTGGATGGTGGTG+AGG 0.503953 6_3:+21594044 Msa0944660:CDS
AAGTGGCGAAGAGAAGTCTT+TGG 0.504021 6_3:+21599818 Msa0944660:CDS
AAAAGACATCTTTCTAAGAG+TGG 0.507146 6_3:-21598499 None:intergenic
TGCGGCTATTTGAATGGAGA+AGG 0.509695 6_3:-21593435 None:intergenic
GGAACAACCCATATCTCAAA+AGG 0.510202 6_3:-21597238 None:intergenic
CCAAGCTCAAAACCAGTTGT+CGG 0.513221 6_3:-21598633 None:intergenic
TGATGTTGTCATTGAAAGTC+CGG 0.515093 6_3:+21594089 Msa0944660:CDS
AAGTAATTGAAACTGCGATC+GGG 0.517225 6_3:+21599775 Msa0944660:CDS
GTGTGAATCATAAAGTTGTA+TGG 0.517550 6_3:-21598537 None:intergenic
AGTGTTACAACAGTACTCAT+AGG 0.519062 6_3:-21600263 None:intergenic
TTTACCTCCAACTAAGATTG+TGG 0.530003 6_3:+21599327 Msa0944660:CDS
ACCATTCGTTCTTTCAACAC+TGG 0.531477 6_3:+21593629 Msa0944660:CDS
GATTGAAGAAGAGGATAGGA+AGG 0.534376 6_3:+21599577 Msa0944660:CDS
TATTTGTGACATTCAACTTG+AGG 0.538401 6_3:+21597156 Msa0944660:CDS
AAGCTTCCTATAAATCAGAT+TGG 0.539524 6_3:-21600325 None:intergenic
CTAGTCCATTGCGTGGTGAT+GGG 0.539912 6_3:+21598559 Msa0944660:CDS
GATTTGACGCCGAAGGATGT+TGG 0.540124 6_3:+21594132 Msa0944660:CDS
CGGAACCAATGAAAAGAAGT+AGG 0.542610 6_3:-21597200 None:intergenic
AATTCGGCATAGATTAAAAG+TGG 0.542885 6_3:+21599987 Msa0944660:exon
AGATAAAACGAAGAAAGCTT+CGG 0.545303 6_3:+21593840 Msa0944660:CDS
TTGGAACAATTGGCAAGCCC+AGG 0.545421 6_3:-21597072 None:intergenic
ACACACGGCTTATTCCTACT+AGG 0.547965 6_3:-21593895 None:intergenic
AGAAAGCTTCGGACTTTAAG+GGG 0.551243 6_3:+21593851 Msa0944660:CDS
GTTGTTGGATTTGACGCCGA+AGG 0.553373 6_3:+21594125 Msa0944660:CDS
TAATCCACAATCTTAGTTGG+AGG 0.553577 6_3:-21599331 None:intergenic
ATGAGAACCAAAACCGTTGG+TGG 0.555752 6_3:+21593576 Msa0944660:CDS
CGAACGGCGTTTGCCACCAA+CGG 0.555890 6_3:-21593589 None:intergenic
TAACAGGTCTTCCTCTCAGT+CGG 0.558034 6_3:-21599701 None:intergenic
AACAACTGCTCCGAATGCAC+CGG 0.558050 6_3:-21594108 None:intergenic
AATCCTTCATATTTCCAAGA+CGG 0.559891 6_3:-21597108 None:intergenic
GGTCTTCCTCTCAGTCGGAA+TGG 0.566394 6_3:-21599696 None:intergenic
TCCAAACTCCTCAAAACCGC+CGG 0.568354 6_3:-21594015 None:intergenic
AAAGGAAATGAAGCAGCAAA+CGG 0.568655 6_3:-21597220 None:intergenic
GAAGTGTGCAGAGTGATACC+GGG 0.570950 6_3:-21597260 None:intergenic
GCGTGGTGATGGGTCAGAGC+TGG 0.574501 6_3:+21598569 Msa0944660:CDS
CATTCTCATAGTCAAATCCT+GGG 0.575192 6_3:+21597055 Msa0944660:CDS
GAAGTAATTGAAACTGCGAT+CGG 0.582267 6_3:+21599774 Msa0944660:CDS
TTCCTGTGTTTGCACATGAA+AGG 0.585708 6_3:+21598721 Msa0944660:CDS
AAGACTGGAACAAAGAAATG+TGG 0.586177 6_3:+21599669 Msa0944660:CDS
ACAATGGCGGATTGAAGAAG+AGG 0.587218 6_3:+21599568 Msa0944660:CDS
TCCTATAAATCAGATTGGCT+AGG 0.589536 6_3:-21600320 None:intergenic
CTCTTCGCCACTTAGCCGAC+CGG 0.590945 6_3:-21599808 None:intergenic
AGACTTTCTGGGATTTCACA+GGG 0.595594 6_3:-21600228 None:intergenic
TACCTTTCATGTGCAAACAC+AGG 0.597392 6_3:-21598723 None:intergenic
ACCATGAGAACCAAAACCGT+TGG 0.597638 6_3:+21593573 Msa0944660:exon
TGTTATTGACCAATGACCAA+AGG 0.599026 6_3:+21600352 Msa0944660:three_prime_UTR
TGGAAAATATAGACAATACA+AGG 0.599857 6_3:+21599632 Msa0944660:CDS
AAGCCGTGTGTGTATTGCAT+TGG 0.600783 6_3:+21593907 Msa0944660:CDS
GCGATCGGGAGCACATATGC+CGG 0.610976 6_3:+21599789 Msa0944660:CDS
ACCAGTGTTGAAAGAACGAA+TGG 0.618296 6_3:-21593630 None:intergenic
CTGTTAGAAATGGTGATGGA+TGG 0.620170 6_3:+21599718 Msa0944660:CDS
AAACCCGTGCTCTCTCCCAA+TGG 0.622311 6_3:-21599523 None:intergenic
AGACCTGTTAGAAATGGTGA+TGG 0.628565 6_3:+21599714 Msa0944660:CDS
GACGCCGAAGGATGTTGGCG+AGG 0.629659 6_3:+21594137 Msa0944660:CDS
TGATGCATTCACCACCAAAG+AGG 0.630981 6_3:+21599357 Msa0944660:CDS
TGTTGAGAGTCCGAATCCGG+CGG 0.631477 6_3:+21593999 Msa0944660:CDS
GGCGGATTGAAGAAGAGGAT+AGG 0.632863 6_3:+21599573 Msa0944660:CDS
GCGGCTATTTGAATGGAGAA+GGG 0.635538 6_3:-21593434 None:intergenic
TCTGACCCATCACCACGCAA+TGG 0.638701 6_3:-21598564 None:intergenic
AGACTGGAACAAAGAAATGT+GGG 0.639374 6_3:+21599670 Msa0944660:CDS
GAAAGATAGATTCTTCCAGA+AGG 0.640993 6_3:-21600206 None:intergenic
AATTAGGGTTGATTAACGAA+CGG 0.647083 6_3:-21593605 None:intergenic
CCAGTTGTCGGAATCAGCTG+AGG 0.654012 6_3:-21598621 None:intergenic
TTCAGCAGATACTCTCGAGT+AGG 0.654168 6_3:-21599489 None:intergenic
GGGTGTCCATTCCGACTGAG+AGG 0.661322 6_3:+21599690 Msa0944660:CDS
ATCATTCAAAGATCAGACAA+TGG 0.661996 6_3:+21599552 Msa0944660:CDS
TGGAAAGTGAACGTAGTGTG+TGG 0.664110 6_3:+21599738 Msa0944660:CDS
TGCCCTAAGTCAGAGAGATG+CGG 0.668293 6_3:-21593453 None:intergenic
TGACCAATGCAATACACACA+CGG 0.674183 6_3:-21593910 None:intergenic
TCGGGAGCACATATGCCGGT+CGG 0.680903 6_3:+21599793 Msa0944660:CDS
TGAATCATAAAGTTGTATGG+CGG 0.697778 6_3:-21598534 None:intergenic
ATTCAAAGATCAGACAATGG+CGG 0.698505 6_3:+21599555 Msa0944660:CDS
GCTATTTGAATGGAGAAGGG+AGG 0.699762 6_3:-21593431 None:intergenic
TCATGAAGATGAATGTAGTG+AGG 0.706412 6_3:+21593930 Msa0944660:CDS
ATTCACACTAGTCCATTGCG+TGG 0.708834 6_3:+21598552 Msa0944660:CDS
AAGTGTGCAGAGTGATACCG+GGG 0.743726 6_3:-21597259 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTTTTTTTTTA+AGG + chr6_3:21599393-21599412 Msa0944660:intron 0.0%
!!! TTATGTTTAGAATAAAATAA+AGG + chr6_3:21595526-21595545 Msa0944660:intron 10.0%
!! TTGAAAAATTAAATAAGAAA+TGG + chr6_3:21597499-21597518 Msa0944660:intron 10.0%
!!! GTTTATAATTGTTGTTTTAT+AGG + chr6_3:21594303-21594322 Msa0944660:intron 15.0%
!!! TTATAATTGTTATTTGACTT+TGG + chr6_3:21596747-21596766 Msa0944660:intron 15.0%
!!! TATAATTGTTATTTGACTTT+GGG + chr6_3:21596748-21596767 Msa0944660:intron 15.0%
!! ATTTATATTTATACAGAACA+AGG - chr6_3:21596907-21596926 None:intergenic 15.0%
!!! TTGATTTTATTAATCTTTGA+AGG + chr6_3:21596991-21597010 Msa0944660:intron 15.0%
!! GAATATAGTTGTATTATATT+TGG + chr6_3:21597545-21597564 Msa0944660:intron 15.0%
!! AAATAAATGTCAAGATATAA+TGG - chr6_3:21598446-21598465 None:intergenic 15.0%
!! TTAATTTATCTATCATTACA+TGG + chr6_3:21599039-21599058 Msa0944660:intron 15.0%
!!! TTGTATATGTGATTTTTGTA+AGG + chr6_3:21595418-21595437 Msa0944660:intron 20.0%
!!! ACTTAAAAGTAGTTTTTCAA+TGG + chr6_3:21595569-21595588 Msa0944660:intron 20.0%
!! ATTGTGAAAAATAAATCCTT+TGG + chr6_3:21595938-21595957 Msa0944660:intron 20.0%
!! TTGTGAAAAATAAATCCTTT+GGG + chr6_3:21595939-21595958 Msa0944660:intron 20.0%
!!! GGTTTCTAAAATTTATGAAT+AGG - chr6_3:21596293-21596312 None:intergenic 20.0%
!! CACTGAATACAAATAAAAAA+GGG - chr6_3:21596395-21596414 None:intergenic 20.0%
!! ACACTGAATACAAATAAAAA+AGG - chr6_3:21596396-21596415 None:intergenic 20.0%
!!! TTTTGCATTTCAACATAAAT+AGG - chr6_3:21597331-21597350 None:intergenic 20.0%
!!! ATAGGACATAAATTTTGATT+AGG + chr6_3:21597585-21597604 Msa0944660:intron 20.0%
!! TTAGGAATTATAGTATAACA+CGG + chr6_3:21597603-21597622 Msa0944660:intron 20.0%
!! CTTTGAATGATAAATTGAAA+TGG - chr6_3:21597772-21597791 None:intergenic 20.0%
!!! TATTTATTCTCGTTTTTTCA+CGG - chr6_3:21598049-21598068 None:intergenic 20.0%
!! AAAAACGAGAATAAATATAG+TGG + chr6_3:21598052-21598071 Msa0944660:intron 20.0%
!!! ATATAGTGGAAGAAAATAAA+AGG + chr6_3:21598066-21598085 Msa0944660:intron 20.0%
!!! TATCTTGACATTTATTTTAC+AGG + chr6_3:21598449-21598468 Msa0944660:intron 20.0%
!! ATTTAGACATGTAATATTGT+TGG + chr6_3:21598984-21599003 Msa0944660:intron 20.0%
!! TTTAAATCCAGTAAAAATCT+GGG - chr6_3:21599126-21599145 None:intergenic 20.0%
!! ATTTAAATCCAGTAAAAATC+TGG - chr6_3:21599127-21599146 None:intergenic 20.0%
!!! GTATTGTTGAATTTTTTTGA+AGG + chr6_3:21599290-21599309 Msa0944660:intron 20.0%
!! TTCTAGATTAGAATTAGAAA+TGG + chr6_3:21599962-21599981 Msa0944660:CDS 20.0%
!! AGAATTAGAAATGGAAAATT+CGG + chr6_3:21599971-21599990 Msa0944660:CDS 20.0%
!! TCATTATATGATGTTATCTT+AGG + chr6_3:21600408-21600427 Msa0944660:three_prime_UTR 20.0%
!!! TTTTTGTTGCTTTCAGTAAT+AGG + chr6_3:21594160-21594179 Msa0944660:CDS 25.0%
!!! GTTTGTTTTTTTTGTGGATT+TGG + chr6_3:21594225-21594244 Msa0944660:intron 25.0%
! GTGATAATAATTTCAGAAAG+TGG + chr6_3:21594920-21594939 Msa0944660:intron 25.0%
! AACAAGATTAACTATGGTAA+AGG + chr6_3:21595994-21596013 Msa0944660:intron 25.0%
! TGTGATAATTTCTTCTTTCA+GGG - chr6_3:21596150-21596169 None:intergenic 25.0%
! ATTTATGAATAGGTCCTAAT+TGG - chr6_3:21596283-21596302 None:intergenic 25.0%
!!! CATAAATTTTAGAAACCGAA+TGG + chr6_3:21596296-21596315 Msa0944660:intron 25.0%
! ACAAATAAAAAAGGGAATGA+AGG - chr6_3:21596387-21596406 None:intergenic 25.0%
! GAAATCAATGTTATCAATAG+CGG - chr6_3:21596517-21596536 None:intergenic 25.0%
!! GATAAGAACTTTTACAACAA+GGG - chr6_3:21596567-21596586 None:intergenic 25.0%
!! AGATAAGAACTTTTACAACA+AGG - chr6_3:21596568-21596587 None:intergenic 25.0%
! TAAGCTATGATTTATGATCT+AGG + chr6_3:21596720-21596739 Msa0944660:intron 25.0%
! AATGACAAATTACATGAAAC+AGG - chr6_3:21596964-21596983 None:intergenic 25.0%
!!! AAGGATTTTTTTTATCAGAC+AGG + chr6_3:21597124-21597143 Msa0944660:CDS 25.0%
!!! AGGATTTTTTTTATCAGACA+GGG + chr6_3:21597125-21597144 Msa0944660:CDS 25.0%
!!! TTCATTTCCTTTTGAGATAT+GGG + chr6_3:21597231-21597250 Msa0944660:CDS 25.0%
!! TAGATGCTAGATCTTTTATA+AGG + chr6_3:21597443-21597462 Msa0944660:intron 25.0%
!! AGATGCTAGATCTTTTATAA+GGG + chr6_3:21597444-21597463 Msa0944660:intron 25.0%
! TGTTATTCAGTTACATTTGA+AGG - chr6_3:21597655-21597674 None:intergenic 25.0%
! CATAGTTTCGAGAAAAAAAT+AGG - chr6_3:21597836-21597855 None:intergenic 25.0%
! ATCAGAAATATGTGAATGTT+AGG + chr6_3:21597880-21597899 Msa0944660:intron 25.0%
! TCAGAAATATGTGAATGTTA+GGG + chr6_3:21597881-21597900 Msa0944660:intron 25.0%
!!! AAAAAGCATCATAAAACTTC+TGG + chr6_3:21597997-21598016 Msa0944660:intron 25.0%
!! TTCACGGATTAATAAACATA+GGG - chr6_3:21598033-21598052 None:intergenic 25.0%
!! TTTCACGGATTAATAAACAT+AGG - chr6_3:21598034-21598053 None:intergenic 25.0%
! TCATAATTCCAATGTCTATT+AGG - chr6_3:21598265-21598284 None:intergenic 25.0%
! TAATAGACATTGGAATTATG+AGG + chr6_3:21598264-21598283 Msa0944660:intron 25.0%
! TTACCAACTATATATACATG+TGG + chr6_3:21598381-21598400 Msa0944660:intron 25.0%
! TTACCACATGTATATATAGT+TGG - chr6_3:21598387-21598406 None:intergenic 25.0%
!! TGAAAGGTATGAAATTTACT+CGG + chr6_3:21598737-21598756 Msa0944660:intron 25.0%
! TTATTTGATGTCAAGAACTT+AGG - chr6_3:21598889-21598908 None:intergenic 25.0%
! CTTGACATCAAATAATCAAA+TGG + chr6_3:21598894-21598913 Msa0944660:intron 25.0%
! TTAGCATCTTGATTGAAATA+TGG + chr6_3:21598948-21598967 Msa0944660:intron 25.0%
! AGTATATGAATAACGTGAAA+AGG - chr6_3:21599015-21599034 None:intergenic 25.0%
!! CATAACACTTGATAAACTTT+TGG - chr6_3:21599151-21599170 None:intergenic 25.0%
! CAAAAGTTTATCAAGTGTTA+TGG + chr6_3:21599149-21599168 Msa0944660:intron 25.0%
!!! TCTCTTTAAGTTTTGAGATT+TGG + chr6_3:21599202-21599221 Msa0944660:intron 25.0%
!!! AAGTTTTGAGATTTGGTTTT+TGG + chr6_3:21599209-21599228 Msa0944660:intron 25.0%
!!! GTTTCTGAGAGTTTATTTTA+AGG + chr6_3:21599263-21599282 Msa0944660:intron 25.0%
! TGGAAAATATAGACAATACA+AGG + chr6_3:21599632-21599651 Msa0944660:CDS 25.0%
! AATGTCTGTAATATGTCTTT+CGG - chr6_3:21599873-21599892 None:intergenic 25.0%
!!! TACTTTCCATTTTTTTGCAA+TGG + chr6_3:21600065-21600084 Msa0944660:three_prime_UTR 25.0%
!! AAAGTACCATTGCAAAAAAA+TGG - chr6_3:21600074-21600093 None:intergenic 25.0%
! AATTAGGGTTGATTAACGAA+CGG - chr6_3:21593608-21593627 None:intergenic 30.0%
AAAGAACGAATGGTGAATTA+GGG - chr6_3:21593623-21593642 None:intergenic 30.0%
GGTTAATGAAAACGATGAAT+GGG - chr6_3:21593677-21593696 None:intergenic 30.0%
! GATTTTCGGTAAATTGGATT+TGG - chr6_3:21593787-21593806 None:intergenic 30.0%
!! ACAGTTGATTTTCGGTAAAT+TGG - chr6_3:21593793-21593812 None:intergenic 30.0%
TTTACCGAAAATCAACTGTT+TGG + chr6_3:21593794-21593813 Msa0944660:CDS 30.0%
!! CATTCCAAACAGTTGATTTT+CGG - chr6_3:21593801-21593820 None:intergenic 30.0%
! AATCAACTGTTTGGAATGAA+TGG + chr6_3:21593803-21593822 Msa0944660:CDS 30.0%
! ATCAACTGTTTGGAATGAAT+GGG + chr6_3:21593804-21593823 Msa0944660:CDS 30.0%
AGATAAAACGAAGAAAGCTT+CGG + chr6_3:21593840-21593859 Msa0944660:CDS 30.0%
! AATGTAGTGAGGAGATTTTT+AGG + chr6_3:21593941-21593960 Msa0944660:CDS 30.0%
! ATGTAGTGAGGAGATTTTTA+GGG + chr6_3:21593942-21593961 Msa0944660:CDS 30.0%
TGAGTCTATCAAATATGTTC+AGG + chr6_3:21594203-21594222 Msa0944660:CDS 30.0%
!!! GTTCAGGTTTGTTTTTTTTG+TGG + chr6_3:21594219-21594238 Msa0944660:intron 30.0%
AATGAAAGTGAATGTGATAC+TGG + chr6_3:21594346-21594365 Msa0944660:intron 30.0%
! TTTTTATCTGACCAGAGAAT+AGG + chr6_3:21594500-21594519 Msa0944660:intron 30.0%
AGACTATGAAATTGTGTAGT+TGG + chr6_3:21594530-21594549 Msa0944660:intron 30.0%
ATTCAAACCAGATACATTGT+CGG - chr6_3:21594664-21594683 None:intergenic 30.0%
!!! CTATCTGTTTTGAAATTGTG+AGG + chr6_3:21594695-21594714 Msa0944660:intron 30.0%
ATTCAAACCAGATACATTGT+CGG - chr6_3:21594664-21594683 None:intergenic 30.0%
!!! CTATCAGTTTTGAAATTGTG+TGG + chr6_3:21594817-21594836 Msa0944660:intron 30.0%
! TATATGTGTAAGTGTTGTGT+CGG + chr6_3:21594960-21594979 Msa0944660:intron 30.0%
TATCTGGACATGACTTTAAT+TGG + chr6_3:21595002-21595021 Msa0944660:intron 30.0%
!! ACTTTAATTGGAAGTGTCAA+TGG + chr6_3:21595014-21595033 Msa0944660:intron 30.0%
! ACGTTTTTGATAGACTCAAA+AGG - chr6_3:21595106-21595125 None:intergenic 30.0%
GAGTCTATCAAAAACGTTTA+AGG + chr6_3:21595109-21595128 Msa0944660:intron 30.0%
! TGAGATTTTTCTCTCTTGTT+TGG + chr6_3:21595620-21595639 Msa0944660:intron 30.0%
ACAATGCACACAATTGATAA+TGG + chr6_3:21595749-21595768 Msa0944660:intron 30.0%
TGTAAAGATATGTTCCTTAG+TGG + chr6_3:21595896-21595915 Msa0944660:intron 30.0%
GTAAAGATATGTTCCTTAGT+GGG + chr6_3:21595897-21595916 Msa0944660:intron 30.0%
TAGTTAATCTTGTTCGAGAT+GGG - chr6_3:21595988-21596007 None:intergenic 30.0%
ATAGTTAATCTTGTTCGAGA+TGG - chr6_3:21595989-21596008 None:intergenic 30.0%
ATCTCGAACAAGATTAACTA+TGG + chr6_3:21595988-21596007 Msa0944660:intron 30.0%
AAGATTAACTATGGTAAAGG+AGG + chr6_3:21595997-21596016 Msa0944660:intron 30.0%
AAGTAAGCCTTCAATATAAG+TGG + chr6_3:21596109-21596128 Msa0944660:intron 30.0%
AGTAAGCCTTCAATATAAGT+GGG + chr6_3:21596110-21596129 Msa0944660:intron 30.0%
GTGTGATAATTTCTTCTTTC+AGG - chr6_3:21596151-21596170 None:intergenic 30.0%
ATTAAGAAAATAAGTCCCAG+AGG - chr6_3:21596212-21596231 None:intergenic 30.0%
AATATGCATGTTTGCCAATT+AGG + chr6_3:21596266-21596285 Msa0944660:intron 30.0%
AGTAATACTCATTGACCATT+CGG - chr6_3:21596314-21596333 None:intergenic 30.0%
! TATGTGAGCTTGAATCTTTT+TGG + chr6_3:21596599-21596618 Msa0944660:intron 30.0%
GACACTTCTAATATGAAAGT+AGG + chr6_3:21596652-21596671 Msa0944660:intron 30.0%
!! TTGAAGGTGTTTAAAAACCA+TGG + chr6_3:21597007-21597026 Msa0944660:intron 30.0%
! GAAACATTGTTTGGAACAAT+TGG - chr6_3:21597085-21597104 None:intergenic 30.0%
AATCCTTCATATTTCCAAGA+CGG - chr6_3:21597111-21597130 None:intergenic 30.0%
TATTTGTGACATTCAACTTG+AGG + chr6_3:21597156-21597175 Msa0944660:CDS 30.0%
! ATCTTCCTACTTCTTTTCAT+TGG + chr6_3:21597195-21597214 Msa0944660:CDS 30.0%
!!! CTTCATTTCCTTTTGAGATA+TGG + chr6_3:21597230-21597249 Msa0944660:CDS 30.0%
TCGTATCACACATGATTTAA+AGG + chr6_3:21597381-21597400 Msa0944660:intron 30.0%
ATGAAATAATTCAGCAGTCT+AGG + chr6_3:21597853-21597872 Msa0944660:intron 30.0%
CAGAAATATGTGAATGTTAG+GGG + chr6_3:21597882-21597901 Msa0944660:intron 30.0%
AGAAATATGTGAATGTTAGG+GGG + chr6_3:21597883-21597902 Msa0944660:intron 30.0%
TTTAGACAATAACCTCCAAA+CGG - chr6_3:21598416-21598435 None:intergenic 30.0%
TTTGGAGGTTATTGTCTAAA+AGG + chr6_3:21598416-21598435 Msa0944660:intron 30.0%
! AAAAGACATCTTTCTAAGAG+TGG - chr6_3:21598502-21598521 None:intergenic 30.0%
TGAATCATAAAGTTGTATGG+CGG - chr6_3:21598537-21598556 None:intergenic 30.0%
GTGTGAATCATAAAGTTGTA+TGG - chr6_3:21598540-21598559 None:intergenic 30.0%
! CTTGATTGAAATATGGACTA+TGG + chr6_3:21598955-21598974 Msa0944660:intron 30.0%
ATATGAATAACGTGAAAAGG+AGG - chr6_3:21599012-21599031 None:intergenic 30.0%
TTTATCAAGTGTTATGGCAT+TGG + chr6_3:21599155-21599174 Msa0944660:intron 30.0%
! TGGCATTGGAATTTAAATTC+TGG + chr6_3:21599169-21599188 Msa0944660:intron 30.0%
! GGCATTGGAATTTAAATTCT+GGG + chr6_3:21599170-21599189 Msa0944660:intron 30.0%
!!! TCTGAGAGTTTATTTTAAGG+TGG + chr6_3:21599266-21599285 Msa0944660:intron 30.0%
CTATAATCCACAATCTTAGT+TGG - chr6_3:21599337-21599356 None:intergenic 30.0%
TCAGAATTCAATTACCTCTT+TGG - chr6_3:21599374-21599393 None:intergenic 30.0%
ATCATTCAAAGATCAGACAA+TGG + chr6_3:21599552-21599571 Msa0944660:CDS 30.0%
! AAGGAAAACAACTGTGATTT+TGG + chr6_3:21599596-21599615 Msa0944660:CDS 30.0%
! AGGAAAACAACTGTGATTTT+GGG + chr6_3:21599597-21599616 Msa0944660:CDS 30.0%
AATTCGGCATAGATTAAAAG+TGG + chr6_3:21599987-21600006 Msa0944660:exon 30.0%
TAGATTAAAAGTGGAACATC+TGG + chr6_3:21599996-21600015 Msa0944660:exon 30.0%
AGCACAGTCAATTAAAACTA+AGG - chr6_3:21600028-21600047 None:intergenic 30.0%
AAGCTTCCTATAAATCAGAT+TGG - chr6_3:21600328-21600347 None:intergenic 30.0%
ACTTGTACAAATCTAACCTT+TGG - chr6_3:21600371-21600390 None:intergenic 30.0%
TACAAGTGCTTAATGTACTT+TGG + chr6_3:21600384-21600403 Msa0944660:three_prime_UTR 30.0%
ACAAGTGCTTAATGTACTTT+GGG + chr6_3:21600385-21600404 Msa0944660:three_prime_UTR 30.0%
! AAGTGTTTGCTCAAAGTGTT+TGG - chr6_3:21593485-21593504 None:intergenic 35.0%
!! ACTGTGTTTTTCGTACTGAT+TGG - chr6_3:21593508-21593527 None:intergenic 35.0%
TTCTCATGGTTGCGAAAAAT+TGG - chr6_3:21593563-21593582 None:intergenic 35.0%
GAAAGAACGAATGGTGAATT+AGG - chr6_3:21593624-21593643 None:intergenic 35.0%
GGGTTAATGAAAACGATGAA+TGG - chr6_3:21593678-21593697 None:intergenic 35.0%
GCAAAAAGGGGTGAAAATTA+GGG - chr6_3:21593741-21593760 None:intergenic 35.0%
TGCAAAAAGGGGTGAAAATT+AGG - chr6_3:21593742-21593761 None:intergenic 35.0%
! TAATTTTCACCCCTTTTTGC+AGG + chr6_3:21593741-21593760 Msa0944660:intron 35.0%
ATTTGGATCTTCTTCCTCAT+CGG - chr6_3:21593770-21593789 None:intergenic 35.0%
AAGAAAGCTTCGGACTTTAA+GGG + chr6_3:21593850-21593869 Msa0944660:CDS 35.0%
CGTATAATACGAATCCTAGT+AGG + chr6_3:21593881-21593900 Msa0944660:CDS 35.0%
TCATGAAGATGAATGTAGTG+AGG + chr6_3:21593930-21593949 Msa0944660:CDS 35.0%
TTCCAATTCGGTTCATCAAA+CGG - chr6_3:21593970-21593989 None:intergenic 35.0%
ATGAACCGAATTGGAAGATT+AGG + chr6_3:21593974-21593993 Msa0944660:CDS 35.0%
TGAACCGAATTGGAAGATTA+GGG + chr6_3:21593975-21593994 Msa0944660:CDS 35.0%
ACAACCCTAATCTTCCAATT+CGG - chr6_3:21593982-21594001 None:intergenic 35.0%
!! TTTTGAGGAGTTTGGATGAT+GGG + chr6_3:21594022-21594041 Msa0944660:CDS 35.0%
TGATGTTGTCATTGAAAGTC+CGG + chr6_3:21594089-21594108 Msa0944660:CDS 35.0%
CAGTAATAGGATCAGAGAAT+TGG + chr6_3:21594173-21594192 Msa0944660:CDS 35.0%
TCAGTTGTTAGTATTGTGTC+TGG - chr6_3:21594395-21594414 None:intergenic 35.0%
! ATGAAATTGTGTAGTTGGTG+TGG + chr6_3:21594535-21594554 Msa0944660:intron 35.0%
!!! CTGTTTTGAAATTGTGAGGT+TGG + chr6_3:21594699-21594718 Msa0944660:intron 35.0%
!!! TTTTGAAATTGTGAGGTTGG+TGG + chr6_3:21594702-21594721 Msa0944660:intron 35.0%
! TTTGAAATTGTGAGGTTGGT+GGG + chr6_3:21594703-21594722 Msa0944660:intron 35.0%
!!! CAGTTTTGAAATTGTGTGGT+TGG + chr6_3:21594821-21594840 Msa0944660:intron 35.0%
TTGTCTTCATCTATGAAGCA+CGG + chr6_3:21594855-21594874 Msa0944660:intron 35.0%
GCACTTGATAAATAAACCCT+AGG + chr6_3:21595047-21595066 Msa0944660:intron 35.0%
CTTGATAGATAAACCCTGTT+AGG + chr6_3:21595285-21595304 Msa0944660:intron 35.0%
ATAGATAAACCCTGTTAGGT+TGG + chr6_3:21595289-21595308 Msa0944660:intron 35.0%
AGCATGTTGGATATACAAGT+AGG + chr6_3:21595321-21595340 Msa0944660:intron 35.0%
ATACAAGTAGGAAGAATGTG+CGG + chr6_3:21595333-21595352 Msa0944660:intron 35.0%
AATGGTAGACATCAATCCTA+AGG - chr6_3:21595368-21595387 None:intergenic 35.0%
TTCAAGGTGGACAAAACAAA+TGG - chr6_3:21595386-21595405 None:intergenic 35.0%
TTTCAATGGAGAATAGCCAT+AGG + chr6_3:21595583-21595602 Msa0944660:intron 35.0%
GATATTAGTCCTTGTTCACT+TGG + chr6_3:21595644-21595663 Msa0944660:intron 35.0%
!! CACAATTGATAATGGATGTG+TGG + chr6_3:21595757-21595776 Msa0944660:intron 35.0%
!! TAATGGATGTGTGGTCATTT+TGG + chr6_3:21595766-21595785 Msa0944660:intron 35.0%
!!! ATGTGTGGTCATTTTGGAAT+AGG + chr6_3:21595772-21595791 Msa0944660:intron 35.0%
!! GTAGTCGAACTTTTTCTAGT+TGG + chr6_3:21595807-21595826 Msa0944660:intron 35.0%
TATGGTAAAGGAGGATGTAT+AGG + chr6_3:21596006-21596025 Msa0944660:intron 35.0%
ATGGTAAAGGAGGATGTATA+GGG + chr6_3:21596007-21596026 Msa0944660:intron 35.0%
ATCACACAAACACTATGCAT+CGG - chr6_3:21596054-21596073 None:intergenic 35.0%
GTAAGCCTTCAATATAAGTG+GGG + chr6_3:21596111-21596130 Msa0944660:intron 35.0%
TAAGCCTTCAATATAAGTGG+GGG + chr6_3:21596112-21596131 Msa0944660:intron 35.0%
ATAACCCCCACTTATATTGA+AGG - chr6_3:21596119-21596138 None:intergenic 35.0%
TGTTAGTTAAGTAAAGCCTC+TGG + chr6_3:21596193-21596212 Msa0944660:intron 35.0%
GTTAGTTAAGTAAAGCCTCT+GGG + chr6_3:21596194-21596213 Msa0944660:intron 35.0%
CAAACATCTGCTATGTTAGA+TGG - chr6_3:21596489-21596508 None:intergenic 35.0%
CATCTAACATAGCAGATGTT+TGG + chr6_3:21596487-21596506 Msa0944660:intron 35.0%
!!! GAATCTTTTTGGCTGCTTTA+CGG + chr6_3:21596610-21596629 Msa0944660:intron 35.0%
AAAAACCATGGTGAAAAAGC+TGG + chr6_3:21597019-21597038 Msa0944660:CDS 35.0%
TCATTCTCATAGTCAAATCC+TGG + chr6_3:21597054-21597073 Msa0944660:CDS 35.0%
CATTCTCATAGTCAAATCCT+GGG + chr6_3:21597055-21597074 Msa0944660:CDS 35.0%
ATCCTTCATATTTCCAAGAC+GGG - chr6_3:21597110-21597129 None:intergenic 35.0%
AAAGGAAATGAAGCAGCAAA+CGG - chr6_3:21597223-21597242 None:intergenic 35.0%
CCATTTCATCATCCAATTCA+TGG - chr6_3:21597285-21597304 None:intergenic 35.0%
CCATGAATTGGATGATGAAA+TGG + chr6_3:21597282-21597301 Msa0944660:CDS 35.0%
GAAATGGTGTTTGAATGTCA+TGG + chr6_3:21597515-21597534 Msa0944660:intron 35.0%
!! ATTTGGTGCCTTAATCATAC+AGG + chr6_3:21597562-21597581 Msa0944660:intron 35.0%
TGTCCTATCCTGTATGATTA+AGG - chr6_3:21597573-21597592 None:intergenic 35.0%
AACACAACATAACACAATCC+AGG - chr6_3:21597712-21597731 None:intergenic 35.0%
! CAAGACTGTGATGCATTTTA+TGG - chr6_3:21597805-21597824 None:intergenic 35.0%
AGCATCATAAAACTTCTGGT+TGG + chr6_3:21598001-21598020 Msa0944660:intron 35.0%
! GCATCATAAAACTTCTGGTT+GGG + chr6_3:21598002-21598021 Msa0944660:intron 35.0%
TGCATAAAAACTCTGAGCTA+TGG + chr6_3:21598149-21598168 Msa0944660:intron 35.0%
ACATGGCAATAATTAGCAAG+AGG + chr6_3:21598205-21598224 Msa0944660:intron 35.0%
! ATTTAGGGCCTAATAGACAT+TGG + chr6_3:21598254-21598273 Msa0944660:intron 35.0%
! TTGAGCTATAGACACAGTTT+TGG + chr6_3:21598335-21598354 Msa0944660:intron 35.0%
ATGTGGTAATTTCTTCCGTT+TGG + chr6_3:21598398-21598417 Msa0944660:intron 35.0%
! ATTTTACAGGCACTTGATCT+TGG + chr6_3:21598462-21598481 Msa0944660:intron 35.0%
! CAGCAGACAAGTTTGAAATT+AGG - chr6_3:21598766-21598785 None:intergenic 35.0%
CTCTCAAATGCACCTAAATA+GGG - chr6_3:21598856-21598875 None:intergenic 35.0%
TCTCTCAAATGCACCTAAAT+AGG - chr6_3:21598857-21598876 None:intergenic 35.0%
!!! TGAATTTTTTTGAAGGCGCA+TGG + chr6_3:21599297-21599316 Msa0944660:intron 35.0%
TTTACCTCCAACTAAGATTG+TGG + chr6_3:21599327-21599346 Msa0944660:CDS 35.0%
TAATCCACAATCTTAGTTGG+AGG - chr6_3:21599334-21599353 None:intergenic 35.0%
GAATTCAATTACCTCTTTGG+TGG - chr6_3:21599371-21599390 None:intergenic 35.0%
ATTCAAAGATCAGACAATGG+CGG + chr6_3:21599555-21599574 Msa0944660:CDS 35.0%
AAGACTGGAACAAAGAAATG+TGG + chr6_3:21599669-21599688 Msa0944660:CDS 35.0%
AGACTGGAACAAAGAAATGT+GGG + chr6_3:21599670-21599689 Msa0944660:CDS 35.0%
TCGCAGTTTCAATTACTTCA+TGG - chr6_3:21599773-21599792 None:intergenic 35.0%
GAAGTAATTGAAACTGCGAT+CGG + chr6_3:21599774-21599793 Msa0944660:CDS 35.0%
AAGTAATTGAAACTGCGATC+GGG + chr6_3:21599775-21599794 Msa0944660:CDS 35.0%
!!! ATCTAGAACGTTTTAGCTGT+TGG - chr6_3:21599950-21599969 None:intergenic 35.0%
ATTCTTCCAGAAGGAGATTT+GGG - chr6_3:21600200-21600219 None:intergenic 35.0%
GAAAGATAGATTCTTCCAGA+AGG - chr6_3:21600209-21600228 None:intergenic 35.0%
TTGAGCAAATGAGACTTTCT+GGG - chr6_3:21600242-21600261 None:intergenic 35.0%
TTTGAGCAAATGAGACTTTC+TGG - chr6_3:21600243-21600262 None:intergenic 35.0%
AGTGTTACAACAGTACTCAT+AGG - chr6_3:21600266-21600285 None:intergenic 35.0%
TCCTAGCCAATCTGATTTAT+AGG + chr6_3:21600319-21600338 Msa0944660:three_prime_UTR 35.0%
! TCCTATAAATCAGATTGGCT+AGG - chr6_3:21600323-21600342 None:intergenic 35.0%
TGTTATTGACCAATGACCAA+AGG + chr6_3:21600352-21600371 Msa0944660:three_prime_UTR 35.0%
CAAATCTAACCTTTGGTCAT+TGG - chr6_3:21600364-21600383 None:intergenic 35.0%
ACCATTCGTTCTTTCAACAC+TGG + chr6_3:21593629-21593648 Msa0944660:CDS 40.0%
! ACCAGTGTTGAAAGAACGAA+TGG - chr6_3:21593633-21593652 None:intergenic 40.0%
AGGGGTGAAAATTAGGGTTA+GGG - chr6_3:21593735-21593754 None:intergenic 40.0%
AAGGGGTGAAAATTAGGGTT+AGG - chr6_3:21593736-21593755 None:intergenic 40.0%
!! TCATCGGTTTCCTGCAAAAA+GGG - chr6_3:21593754-21593773 None:intergenic 40.0%
GAAGAAAGCTTCGGACTTTA+AGG + chr6_3:21593849-21593868 Msa0944660:CDS 40.0%
AGAAAGCTTCGGACTTTAAG+GGG + chr6_3:21593851-21593870 Msa0944660:CDS 40.0%
TGACCAATGCAATACACACA+CGG - chr6_3:21593913-21593932 None:intergenic 40.0%
TTCCGTTTGATGAACCGAAT+TGG + chr6_3:21593965-21593984 Msa0944660:CDS 40.0%
!!! GTTTTGAGGAGTTTGGATGA+TGG + chr6_3:21594021-21594040 Msa0944660:CDS 40.0%
!! TTTGGATGATGGGTTTGTGT+TGG + chr6_3:21594032-21594051 Msa0944660:CDS 40.0%
GTTAGTATTGTGTCTGGTGT+CGG - chr6_3:21594389-21594408 None:intergenic 40.0%
CAGATACATTGTCAATGTCG+CGG - chr6_3:21594418-21594437 None:intergenic 40.0%
GTCTCAAATCACCTATTCTC+TGG - chr6_3:21594514-21594533 None:intergenic 40.0%
!! TTGAAATTGTGAGGTTGGTG+GGG + chr6_3:21594704-21594723 Msa0944660:intron 40.0%
! TTGAAATTGTGTGGTTGGTG+TGG + chr6_3:21594826-21594845 Msa0944660:intron 40.0%
GTCGCAATCAATATCATGTC+TGG - chr6_3:21594884-21594903 None:intergenic 40.0%
! CGGATCTAATCTGAAGTATC+TGG + chr6_3:21594986-21595005 Msa0944660:intron 40.0%
TCTGTTGCTCAAACAACCTA+GGG - chr6_3:21595066-21595085 None:intergenic 40.0%
TTCTGTTGCTCAAACAACCT+AGG - chr6_3:21595067-21595086 None:intergenic 40.0%
TATATGTGTCAGTGTCGTGT+TGG + chr6_3:21595193-21595212 Msa0944660:intron 40.0%
! TGTTTTGTCCACCTTGAACA+AGG + chr6_3:21595388-21595407 Msa0944660:intron 40.0%
CACTACTCTCACATTACCTA+TGG - chr6_3:21595602-21595621 None:intergenic 40.0%
TGGCTTAGTGGAACTATTCT+AGG + chr6_3:21595679-21595698 Msa0944660:intron 40.0%
AAGATATGTTCCTTAGTGGG+AGG + chr6_3:21595900-21595919 Msa0944660:intron 40.0%
AAACCAAATACCTCCCACTA+AGG - chr6_3:21595913-21595932 None:intergenic 40.0%
AGGATGTATAGGGATACAAG+TGG + chr6_3:21596017-21596036 Msa0944660:intron 40.0%
TCACACAAACACTATGCATC+GGG - chr6_3:21596053-21596072 None:intergenic 40.0%
! AAATAGCGGAAGCTACAAAG+TGG - chr6_3:21596449-21596468 None:intergenic 40.0%
ATAGTGTTGCCAGCAAATAG+CGG - chr6_3:21596463-21596482 None:intergenic 40.0%
! CAAGGGACACAAAGTTTTCA+AGG - chr6_3:21596550-21596569 None:intergenic 40.0%
CTTTACGGCTGTGTTTGTAT+GGG + chr6_3:21596625-21596644 Msa0944660:intron 40.0%
TTTACGGCTGTGTTTGTATG+GGG + chr6_3:21596626-21596645 Msa0944660:intron 40.0%
ATACAGAACAAGGCAAGACT+AGG - chr6_3:21596897-21596916 None:intergenic 40.0%
TTATGACGGTTGTCTTCTTC+TGG + chr6_3:21596936-21596955 Msa0944660:intron 40.0%
CGGAACCAATGAAAAGAAGT+AGG - chr6_3:21597203-21597222 None:intergenic 40.0%
GGAACAACCCATATCTCAAA+AGG - chr6_3:21597241-21597260 None:intergenic 40.0%
GTGCCTTAATCATACAGGAT+AGG + chr6_3:21597567-21597586 Msa0944660:intron 40.0%
GGCACATGACAATTAGAACT+AGG - chr6_3:21597634-21597653 None:intergenic 40.0%
AATCCAGGTTTACCACACAA+AGG - chr6_3:21597697-21597716 None:intergenic 40.0%
TGCATCACAGTCTTGAATCA+TGG + chr6_3:21597810-21597829 Msa0944660:intron 40.0%
ACAGATGCAACAGCTGAATT+TGG + chr6_3:21598093-21598112 Msa0944660:intron 40.0%
! GTTTTTATGCAGTTCCAGTC+AGG - chr6_3:21598140-21598159 None:intergenic 40.0%
TAACAGGTGAACTCAGAACA+TGG + chr6_3:21598188-21598207 Msa0944660:intron 40.0%
CTGTATGCGATGGACATTTA+GGG + chr6_3:21598239-21598258 Msa0944660:intron 40.0%
TGGTAATTTCTTCCGTTTGG+AGG + chr6_3:21598401-21598420 Msa0944660:intron 40.0%
TTCCTGTGTTTGCACATGAA+AGG + chr6_3:21598721-21598740 Msa0944660:CDS 40.0%
TACCTTTCATGTGCAAACAC+AGG - chr6_3:21598726-21598745 None:intergenic 40.0%
GTGAGACTAAGTCCCTATTT+AGG + chr6_3:21598841-21598860 Msa0944660:intron 40.0%
CATTACATGGATACGAGAAG+AGG + chr6_3:21599052-21599071 Msa0944660:intron 40.0%
!! TTGGTAGCCCAGATTTTTAC+TGG + chr6_3:21599116-21599135 Msa0944660:intron 40.0%
!!! ATTTTTTTGAAGGCGCATGG+TGG + chr6_3:21599300-21599319 Msa0944660:intron 40.0%
!!! TTTTTTTGAAGGCGCATGGT+GGG + chr6_3:21599301-21599320 Msa0944660:intron 40.0%
!! TCGAGAGTATCTGCTGAATT+GGG + chr6_3:21599494-21599513 Msa0944660:CDS 40.0%
GATTGAAGAAGAGGATAGGA+AGG + chr6_3:21599577-21599596 Msa0944660:CDS 40.0%
!!! ATTTTGGGTTGCGAAAGAAG+TGG + chr6_3:21599612-21599631 Msa0944660:CDS 40.0%
AGAGGAAGACCTGTTAGAAA+TGG + chr6_3:21599708-21599727 Msa0944660:CDS 40.0%
AGACCTGTTAGAAATGGTGA+TGG + chr6_3:21599714-21599733 Msa0944660:CDS 40.0%
CATCCATCACCATTTCTAAC+AGG - chr6_3:21599720-21599739 None:intergenic 40.0%
!! CTGTTAGAAATGGTGATGGA+TGG + chr6_3:21599718-21599737 Msa0944660:CDS 40.0%
GATTCTTCCAGAAGGAGATT+TGG - chr6_3:21600201-21600220 None:intergenic 40.0%
!! AGACTTTCTGGGATTTCACA+GGG - chr6_3:21600231-21600250 None:intergenic 40.0%
GCTATTTGAATGGAGAAGGG+AGG - chr6_3:21593434-21593453 None:intergenic 45.0%
GCGGCTATTTGAATGGAGAA+GGG - chr6_3:21593437-21593456 None:intergenic 45.0%
TGCGGCTATTTGAATGGAGA+AGG - chr6_3:21593438-21593457 None:intergenic 45.0%
GAGAGATGCGGCTATTTGAA+TGG - chr6_3:21593444-21593463 None:intergenic 45.0%
ACCATGAGAACCAAAACCGT+TGG + chr6_3:21593573-21593592 Msa0944660:exon 45.0%
!!! ACCAACGGTTTTGGTTCTCA+TGG - chr6_3:21593577-21593596 None:intergenic 45.0%
ATGAGAACCAAAACCGTTGG+TGG + chr6_3:21593576-21593595 Msa0944660:CDS 45.0%
!!! GAATGGGAGTGTCGTTTTGA+AGG - chr6_3:21593661-21593680 None:intergenic 45.0%
!! CATCGGTTTCCTGCAAAAAG+GGG - chr6_3:21593753-21593772 None:intergenic 45.0%
!! CTCATCGGTTTCCTGCAAAA+AGG - chr6_3:21593755-21593774 None:intergenic 45.0%
! CTTTTTGCAGGAAACCGATG+AGG + chr6_3:21593753-21593772 Msa0944660:intron 45.0%
ACACACGGCTTATTCCTACT+AGG - chr6_3:21593898-21593917 None:intergenic 45.0%
AAGCCGTGTGTGTATTGCAT+TGG + chr6_3:21593907-21593926 Msa0944660:CDS 45.0%
!! GATGATGGGTTTGTGTTGGA+TGG + chr6_3:21594036-21594055 Msa0944660:CDS 45.0%
!!! ATGGTGGTGAGGTTTTGGAT+GGG + chr6_3:21594055-21594074 Msa0944660:CDS 45.0%
!!! GTGAGGTTTTGGATGGGTTT+GGG + chr6_3:21594061-21594080 Msa0944660:CDS 45.0%
CATTGAAAGTCCGGTGCATT+CGG + chr6_3:21594098-21594117 Msa0944660:CDS 45.0%
AAAACCTCGCCAACATCCTT+CGG - chr6_3:21594144-21594163 None:intergenic 45.0%
TAATATCACCCCATCGTGTC+TGG - chr6_3:21594593-21594612 None:intergenic 45.0%
ATCAGTATCGTGTCTGGTGT+CGG - chr6_3:21594634-21594653 None:intergenic 45.0%
GTCACTATCAGTATCGTGTC+TGG - chr6_3:21594640-21594659 None:intergenic 45.0%
AGTGACACCGACAATGTATC+TGG + chr6_3:21594654-21594673 Msa0944660:intron 45.0%
GTCACTATCAGTATCGTGTC+TGG - chr6_3:21594640-21594659 None:intergenic 45.0%
AGTGACACCGACAATGTATC+TGG + chr6_3:21594654-21594673 Msa0944660:intron 45.0%
! TGTAAGTGTTGTGTCGGTGT+CGG + chr6_3:21594966-21594985 Msa0944660:intron 45.0%
! TCAGTGTCGTGTTGGTGTTT+GGG + chr6_3:21595201-21595220 Msa0944660:intron 45.0%
TCCACTCTACCAACCTAACA+GGG - chr6_3:21595301-21595320 None:intergenic 45.0%
TTCCACTCTACCAACCTAAC+AGG - chr6_3:21595302-21595321 None:intergenic 45.0%
! TTGGTAGAGTGGAAGCATGT+TGG + chr6_3:21595308-21595327 Msa0944660:intron 45.0%
TTGTCCACCTTGAACAAGGT+TGG + chr6_3:21595392-21595411 Msa0944660:intron 45.0%
ACAAGAGCCAACCTTGTTCA+AGG - chr6_3:21595402-21595421 None:intergenic 45.0%
CATTGCATGCCAAGTGAACA+AGG - chr6_3:21595656-21595675 None:intergenic 45.0%
TGTTCACTTGGCATGCAATG+AGG + chr6_3:21595656-21595675 Msa0944660:intron 45.0%
GTGTGCATTGTTCGTCCTTA+AGG - chr6_3:21595740-21595759 None:intergenic 45.0%
TCCTTAAGCACTCAGCAACA+AGG + chr6_3:21595837-21595856 Msa0944660:intron 45.0%
ACCTTGTTGCTGAGTGCTTA+AGG - chr6_3:21595841-21595860 None:intergenic 45.0%
TAAGCACTCAGCAACAAGGT+CGG + chr6_3:21595841-21595860 Msa0944660:intron 45.0%
ACTTCCTACTTTCAGCAGCA+TGG - chr6_3:21595877-21595896 None:intergenic 45.0%
!! GTTCCTTAGTGGGAGGTATT+TGG + chr6_3:21595907-21595926 Msa0944660:intron 45.0%
! GTGATCGTTTTGCATCTCGA+AGG + chr6_3:21596069-21596088 Msa0944660:intron 45.0%
TTGTAGCTTCCGCTATTTGC+TGG + chr6_3:21596451-21596470 Msa0944660:intron 45.0%
GCTTTACGGCTGTGTTTGTA+TGG + chr6_3:21596624-21596643 Msa0944660:intron 45.0%
! GTGCTTCACATCACTGACTA+TGG + chr6_3:21596809-21596828 Msa0944660:intron 45.0%
AGACGGGCAGAAACATTGTT+TGG - chr6_3:21597094-21597113 None:intergenic 45.0%
! AACAATGTTTCTGCCCGTCT+TGG + chr6_3:21597094-21597113 Msa0944660:CDS 45.0%
TGCCCGTCTTGGAAATATGA+AGG + chr6_3:21597105-21597124 Msa0944660:CDS 45.0%
! TTGAGATATGGGTTGTTCCC+CGG + chr6_3:21597242-21597261 Msa0944660:CDS 45.0%
CTCTGCACACTTCCATGAAT+TGG + chr6_3:21597270-21597289 Msa0944660:CDS 45.0%
TTCACACATCTGCCTTTGTG+TGG + chr6_3:21597682-21597701 Msa0944660:intron 45.0%
! GATAGTGGCTAAGAGCATGA+TGG + chr6_3:21597924-21597943 Msa0944660:intron 45.0%
GATGCAACAGCTGAATTTGG+TGG + chr6_3:21598096-21598115 Msa0944660:intron 45.0%
AGAACAAGCTGTGGTGTAAC+AGG + chr6_3:21598172-21598191 Msa0944660:intron 45.0%
TGTCAATGTCCTGTATGCGA+TGG + chr6_3:21598229-21598248 Msa0944660:intron 45.0%
CCTAAATGTCCATCGCATAC+AGG - chr6_3:21598241-21598260 None:intergenic 45.0%
CCTGTATGCGATGGACATTT+AGG + chr6_3:21598238-21598257 Msa0944660:intron 45.0%
TTACAGGCACTTGATCTTGG+AGG + chr6_3:21598465-21598484 Msa0944660:intron 45.0%
ATTCACACTAGTCCATTGCG+TGG + chr6_3:21598552-21598571 Msa0944660:CDS 45.0%
CCAAGCTCAAAACCAGTTGT+CGG - chr6_3:21598636-21598655 None:intergenic 45.0%
!!! ACTGGTTTTGAGCTTGGAAC+TGG + chr6_3:21598639-21598658 Msa0944660:CDS 45.0%
!!! CTGGTTTTGAGCTTGGAACT+GGG + chr6_3:21598640-21598659 Msa0944660:CDS 45.0%
! CATCAATCCTGTTTTGCCTG+AGG + chr6_3:21598668-21598687 Msa0944660:CDS 45.0%
AGAATCTTTGCAGCATCCTC+AGG - chr6_3:21598687-21598706 None:intergenic 45.0%
GTGACTCTTTGTGTCAGCTT+AGG + chr6_3:21598814-21598833 Msa0944660:intron 45.0%
CAGTCAAGCCAAGACATTGT+TGG + chr6_3:21599097-21599116 Msa0944660:intron 45.0%
TGATGCATTCACCACCAAAG+AGG + chr6_3:21599357-21599376 Msa0944660:CDS 45.0%
TTCAGCAGATACTCTCGAGT+AGG - chr6_3:21599492-21599511 None:intergenic 45.0%
!! CTCGAGAGTATCTGCTGAAT+TGG + chr6_3:21599493-21599512 Msa0944660:CDS 45.0%
!! ACAATGGCGGATTGAAGAAG+AGG + chr6_3:21599568-21599587 Msa0944660:CDS 45.0%
TAACAGGTCTTCCTCTCAGT+CGG - chr6_3:21599704-21599723 None:intergenic 45.0%
TGGAAAGTGAACGTAGTGTG+TGG + chr6_3:21599738-21599757 Msa0944660:CDS 45.0%
AAGTGGCGAAGAGAAGTCTT+TGG + chr6_3:21599818-21599837 Msa0944660:CDS 45.0%
ATCTCTCCCAAATCTCCTTC+TGG + chr6_3:21600191-21600210 Msa0944660:three_prime_UTR 45.0%
!! GAGACTTTCTGGGATTTCAC+AGG - chr6_3:21600232-21600251 None:intergenic 45.0%
!! AAAAAATTGAAAAAAAATTA+GGG - chr6_3:21593698-21593717 None:intergenic 5.0%
!! AAAAAAATTGAAAAAAAATT+AGG - chr6_3:21593699-21593718 None:intergenic 5.0%
!!! TATAGAAATTTTAAATTTTT+AGG + chr6_3:21594280-21594299 Msa0944660:intron 5.0%
!!! ATAGAAATTTTAAATTTTTA+GGG + chr6_3:21594281-21594300 Msa0944660:intron 5.0%
!! TAAATATAAATATATTATGA+CGG + chr6_3:21596922-21596941 Msa0944660:intron 5.0%
!!! TTCTATTAATTTTTATTTTT+AGG + chr6_3:21599461-21599480 Msa0944660:intron 5.0%
TAGCCGCATCTCTCTGACTT+AGG + chr6_3:21593450-21593469 Msa0944660:five_prime_UTR 50.0%
AGCCGCATCTCTCTGACTTA+GGG + chr6_3:21593451-21593470 Msa0944660:five_prime_UTR 50.0%
TGCCCTAAGTCAGAGAGATG+CGG - chr6_3:21593456-21593475 None:intergenic 50.0%
GGTTGTTGAGAGTCCGAATC+CGG + chr6_3:21593996-21594015 Msa0944660:CDS 50.0%
TCCAAACTCCTCAAAACCGC+CGG - chr6_3:21594018-21594037 None:intergenic 50.0%
! GATGGGTTTGTGTTGGATGG+TGG + chr6_3:21594039-21594058 Msa0944660:CDS 50.0%
! GTTTGTGTTGGATGGTGGTG+AGG + chr6_3:21594044-21594063 Msa0944660:CDS 50.0%
!! GTTGGATGGTGGTGAGGTTT+TGG + chr6_3:21594050-21594069 Msa0944660:CDS 50.0%
!!! GATGGTGGTGAGGTTTTGGA+TGG + chr6_3:21594054-21594073 Msa0944660:CDS 50.0%
!!! GGTGAGGTTTTGGATGGGTT+TGG + chr6_3:21594060-21594079 Msa0944660:CDS 50.0%
AACAACTGCTCCGAATGCAC+CGG - chr6_3:21594111-21594130 None:intergenic 50.0%
GTTGTTGGATTTGACGCCGA+AGG + chr6_3:21594125-21594144 Msa0944660:CDS 50.0%
GATTTGACGCCGAAGGATGT+TGG + chr6_3:21594132-21594151 Msa0944660:CDS 50.0%
! TGTCTGGTGTCAGTGCTTCA+TGG - chr6_3:21594577-21594596 None:intergenic 50.0%
! GTCAGTGTCGTGTTGGTGTT+TGG + chr6_3:21595200-21595219 Msa0944660:intron 50.0%
! TCGTGTTGGTGTTTGGGCAT+TGG + chr6_3:21595207-21595226 Msa0944660:intron 50.0%
CTGAAATCGTGTCCAGACTC+CGG - chr6_3:21595239-21595258 None:intergenic 50.0%
!! ACCCTGTTAGGTTGGTAGAG+TGG + chr6_3:21595297-21595316 Msa0944660:intron 50.0%
AGTAGGAAGAATGTGCGGAG+TGG + chr6_3:21595338-21595357 Msa0944660:intron 50.0%
TGTGCGGAGTGGTATACCTT+AGG + chr6_3:21595349-21595368 Msa0944660:intron 50.0%
AGAGCCAACCTTGTTCAAGG+TGG - chr6_3:21595399-21595418 None:intergenic 50.0%
TCACTTGGCATGCAATGAGG+TGG + chr6_3:21595659-21595678 Msa0944660:intron 50.0%
CATGCAATGAGGTGGCTTAG+TGG + chr6_3:21595667-21595686 Msa0944660:intron 50.0%
GCTTCCTTGTTGCTGCCTTA+AGG + chr6_3:21595722-21595741 Msa0944660:intron 50.0%
TCGTCCTTAAGGCAGCAACA+AGG - chr6_3:21595729-21595748 None:intergenic 50.0%
GGAACCATGCTGCTGAAAGT+AGG + chr6_3:21595870-21595889 Msa0944660:intron 50.0%
CAAGGCTTGACATCACCCAA+AGG - chr6_3:21595957-21595976 None:intergenic 50.0%
AGCGTGGCTCAATTACTGAG+AGG - chr6_3:21596361-21596380 None:intergenic 50.0%
!!! CTGCACCAGCTTTTTCACCA+TGG - chr6_3:21597027-21597046 None:intergenic 50.0%
TTGGAACAATTGGCAAGCCC+AGG - chr6_3:21597075-21597094 None:intergenic 50.0%
AAGTGTGCAGAGTGATACCG+GGG - chr6_3:21597262-21597281 None:intergenic 50.0%
GAAGTGTGCAGAGTGATACC+GGG - chr6_3:21597263-21597282 None:intergenic 50.0%
! GGAAGTGTGCAGAGTGATAC+CGG - chr6_3:21597264-21597283 None:intergenic 50.0%
CTGCCTTTGTGTGGTAAACC+TGG + chr6_3:21597691-21597710 Msa0944660:intron 50.0%
AGCACAGTGAGTCGTGATAG+TGG + chr6_3:21597909-21597928 Msa0944660:intron 50.0%
! TTTGGTGGTCACAGTCCGTT+AGG + chr6_3:21598111-21598130 Msa0944660:intron 50.0%
GTTCCAGTCAGGTCACCTAA+CGG - chr6_3:21598129-21598148 None:intergenic 50.0%
GAGCTATGGAGAACAAGCTG+TGG + chr6_3:21598163-21598182 Msa0944660:intron 50.0%
ACTAGTCCATTGCGTGGTGA+TGG + chr6_3:21598558-21598577 Msa0944660:CDS 50.0%
CTAGTCCATTGCGTGGTGAT+GGG + chr6_3:21598559-21598578 Msa0944660:CDS 50.0%
CAGAGCTGGCATACAGTCAT+TGG + chr6_3:21598583-21598602 Msa0944660:CDS 50.0%
!!! CCGACAACTGGTTTTGAGCT+TGG + chr6_3:21598633-21598652 Msa0944660:CDS 50.0%
CTGGGCTACCAACAATGTCT+TGG - chr6_3:21599108-21599127 None:intergenic 50.0%
TGAATTGGGCACGAGCCATT+GGG + chr6_3:21599508-21599527 Msa0944660:CDS 50.0%
!! GGCGGATTGAAGAAGAGGAT+AGG + chr6_3:21599573-21599592 Msa0944660:CDS 50.0%
GATGCATTAGCTCGCAAGAC+TGG + chr6_3:21599654-21599673 Msa0944660:CDS 50.0%
! GCGTTTGCCACCAACGGTTT+TGG - chr6_3:21593586-21593605 None:intergenic 55.0%
TGTTGAGAGTCCGAATCCGG+CGG + chr6_3:21593999-21594018 Msa0944660:CDS 55.0%
CTCCTCAAAACCGCCGGATT+CGG - chr6_3:21594012-21594031 None:intergenic 55.0%
!!! TCCGGCGGTTTTGAGGAGTT+TGG + chr6_3:21594014-21594033 Msa0944660:CDS 55.0%
GGTGCATTCGGAGCAGTTGT+TGG + chr6_3:21594110-21594129 Msa0944660:CDS 55.0%
!! AGCACTGACACCAGACACGA+TGG + chr6_3:21594580-21594599 Msa0944660:intron 55.0%
! GCACTGACACCAGACACGAT+GGG + chr6_3:21594581-21594600 Msa0944660:intron 55.0%
CACTGACACCAGACACGATG+GGG + chr6_3:21594582-21594601 Msa0944660:intron 55.0%
! CAGCAACAAGGTCGGCTTAG+TGG + chr6_3:21595849-21595868 Msa0944660:intron 55.0%
!! TCGAGATGGGCTGAGCAACA+AGG - chr6_3:21595975-21595994 None:intergenic 55.0%
AAGGGAATGAAGGCAGAGCG+TGG - chr6_3:21596377-21596396 None:intergenic 55.0%
AGTCCGTTAGGTGACCTGAC+TGG + chr6_3:21598123-21598142 Msa0944660:intron 55.0%
TCTGACCCATCACCACGCAA+TGG - chr6_3:21598567-21598586 None:intergenic 55.0%
CCAGTTGTCGGAATCAGCTG+AGG - chr6_3:21598624-21598643 None:intergenic 55.0%
! CCTCAGCTGATTCCGACAAC+TGG + chr6_3:21598621-21598640 Msa0944660:CDS 55.0%
GCAGCATCCTCAGGCAAAAC+AGG - chr6_3:21598678-21598697 None:intergenic 55.0%
CTGAATTGGGCACGAGCCAT+TGG + chr6_3:21599507-21599526 Msa0944660:CDS 55.0%
AAACCCGTGCTCTCTCCCAA+TGG - chr6_3:21599526-21599545 None:intergenic 55.0%
GGTCTTCCTCTCAGTCGGAA+TGG - chr6_3:21599699-21599718 None:intergenic 55.0%
ACATATGCCGGTCGGCTAAG+TGG + chr6_3:21599801-21599820 Msa0944660:CDS 55.0%
CGAACGGCGTTTGCCACCAA+CGG - chr6_3:21593592-21593611 None:intergenic 60.0%
! GTCCGAATCCGGCGGTTTTG+AGG + chr6_3:21594007-21594026 Msa0944660:CDS 60.0%
!! GTTTGGGCATTGGCATGCGC+CGG + chr6_3:21595217-21595236 Msa0944660:intron 60.0%
CGAGCCATTGGGAGAGAGCA+CGG + chr6_3:21599519-21599538 Msa0944660:CDS 60.0%
! GAGCCATTGGGAGAGAGCAC+GGG + chr6_3:21599520-21599539 Msa0944660:CDS 60.0%
GGGTGTCCATTCCGACTGAG+AGG + chr6_3:21599690-21599709 Msa0944660:CDS 60.0%
! GCGATCGGGAGCACATATGC+CGG + chr6_3:21599789-21599808 Msa0944660:CDS 60.0%
! TCGGGAGCACATATGCCGGT+CGG + chr6_3:21599793-21599812 Msa0944660:CDS 60.0%
CTCTTCGCCACTTAGCCGAC+CGG - chr6_3:21599811-21599830 None:intergenic 60.0%
GACGCCGAAGGATGTTGGCG+AGG + chr6_3:21594137-21594156 Msa0944660:CDS 65.0%
CATTGGCATGCGCCGGAGTC+TGG + chr6_3:21595224-21595243 Msa0944660:intron 65.0%
!! GCGTGGTGATGGGTCAGAGC+TGG + chr6_3:21598569-21598588 Msa0944660:CDS 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 21593427 21600447 21593427 ID=Msa0944660;Name=Msa0944660
chr6_3 mRNA 21593427 21600447 21593427 ID=Msa0944660-mRNA-1;Parent=Msa0944660;Name=Msa0944660-mRNA-1;_AED=0.09;_eAED=0.09;_QI=149|1|1|1|1|1|6|449|560
chr6_3 exon 21593427 21593650 21593427 ID=Msa0944660-mRNA-1:exon:6473;Parent=Msa0944660-mRNA-1
chr6_3 exon 21593763 21594224 21593763 ID=Msa0944660-mRNA-1:exon:6474;Parent=Msa0944660-mRNA-1
chr6_3 exon 21597013 21597303 21597013 ID=Msa0944660-mRNA-1:exon:6475;Parent=Msa0944660-mRNA-1
chr6_3 exon 21598471 21598742 21598471 ID=Msa0944660-mRNA-1:exon:6476;Parent=Msa0944660-mRNA-1
chr6_3 exon 21599312 21599378 21599312 ID=Msa0944660-mRNA-1:exon:6477;Parent=Msa0944660-mRNA-1
chr6_3 exon 21599483 21600447 21599483 ID=Msa0944660-mRNA-1:exon:6478;Parent=Msa0944660-mRNA-1
chr6_3 five_prime_UTR 21593427 21593575 21593427 ID=Msa0944660-mRNA-1:five_prime_utr;Parent=Msa0944660-mRNA-1
chr6_3 CDS 21593576 21593650 21593576 ID=Msa0944660-mRNA-1:cds;Parent=Msa0944660-mRNA-1
chr6_3 CDS 21593763 21594224 21593763 ID=Msa0944660-mRNA-1:cds;Parent=Msa0944660-mRNA-1
chr6_3 CDS 21597013 21597303 21597013 ID=Msa0944660-mRNA-1:cds;Parent=Msa0944660-mRNA-1
chr6_3 CDS 21598471 21598742 21598471 ID=Msa0944660-mRNA-1:cds;Parent=Msa0944660-mRNA-1
chr6_3 CDS 21599312 21599378 21599312 ID=Msa0944660-mRNA-1:cds;Parent=Msa0944660-mRNA-1
chr6_3 CDS 21599483 21599998 21599483 ID=Msa0944660-mRNA-1:cds;Parent=Msa0944660-mRNA-1
chr6_3 three_prime_UTR 21599999 21600447 21599999 ID=Msa0944660-mRNA-1:three_prime_utr;Parent=Msa0944660-mRNA-1
Gene Sequence

>Msa0944660

ATGAGAACCAAAACCGTTGGTGGCAAACGCCGTTCGTTAATCAACCCTAATTCACCATTCGTTCTTTCAACACTGGAAACCGATGAGGAAGAAGATCCAAATCCAATTTACCGAAAATCAACTGTTTGGAATGAATGGGTTATCTTCAAGCAAGATAAAACGAAGAAAGCTTCGGACTTTAAGGGGAAATCGACGTATAATACGAATCCTAGTAGGAATAAGCCGTGTGTGTATTGCATTGGTCATGAAGATGAATGTAGTGAGGAGATTTTTAGGGTTCCGTTTGATGAACCGAATTGGAAGATTAGGGTTGTTGAGAGTCCGAATCCGGCGGTTTTGAGGAGTTTGGATGATGGGTTTGTGTTGGATGGTGGTGAGGTTTTGGATGGGTTTGGGATTCATGATGTTGTCATTGAAAGTCCGGTGCATTCGGAGCAGTTGTTGGATTTGACGCCGAAGGATGTTGGCGAGGTTTTTGTTGCTTTCAGTAATAGGATCAGAGAATTGGTTCATCTTGAGTCTATCAAATATGTTCAGGTGTTTAAAAACCATGGTGAAAAAGCTGGTGCAGCAATGAGTCATTCTCATAGTCAAATCCTGGGCTTGCCAATTGTTCCAAACAATGTTTCTGCCCGTCTTGGAAATATGAAGGATTTTTTTTATCAGACAGGGAAGTGCTGTATTTGTGACATTCAACTTGAGGATCTTTTGATTGATTCATCTTCCTACTTCTTTTCATTGGTTCCGTTTGCTGCTTCATTTCCTTTTGAGATATGGGTTGTTCCCCGGTATCACTCTGCACACTTCCATGAATTGGATGATGAAATGGCACTTGATCTTGGAGGTTTGATGAGAACCACTCTTAGAAAGATGTCTTTTCAATTGAACAATCCGCCATACAACTTTATGATTCACACTAGTCCATTGCGTGGTGATGGGTCAGAGCTGGCATACAGTCATTGGTTTATACAGATAATACCTCAGCTGATTCCGACAACTGGTTTTGAGCTTGGAACTGGGTCTCACATCAATCCTGTTTTGCCTGAGGATGCTGCAAAGATTCTAAGAGAAGTGATTGTTCCTGTGTTTGCACATGAAAGGCGCATGGTGGGATTTTTACCTCCAACTAAGATTGTGGATTATAGTGATGCATTCACCACCAAAGAGGTGTTTCCTACTCGAGAGTATCTGCTGAATTGGGCACGAGCCATTGGGAGAGAGCACGGGTTTACTGTTATCATTCAAAGATCAGACAATGGCGGATTGAAGAAGAGGATAGGAAGGAAAACAACTGTGATTTTGGGTTGCGAAAGAAGTGGAAAATATAGACAATACAAGGATGCATTAGCTCGCAAGACTGGAACAAAGAAATGTGGGTGTCCATTCCGACTGAGAGGAAGACCTGTTAGAAATGGTGATGGATGGAAAGTGAACGTAGTGTGTGGATTTCACAACCATGAAGTAATTGAAACTGCGATCGGGAGCACATATGCCGGTCGGCTAAGTGGCGAAGAGAAGTCTTTGGTCGATGATCTGACAAGAAGCAATTACAAACCGAAAGACATATTACAGACATTGAAAGAACGTAATGAAGAGAATCTCACTTCTATCAAGCAGATTTATAATTTGCGCCAACAGCTAAAACGTTCTAGATTAGAATTAGAAATGGAAAATTCGGCATAG

Protein sequence

>Msa0944660

MRTKTVGGKRRSLINPNSPFVLSTLETDEEEDPNPIYRKSTVWNEWVIFKQDKTKKASDFKGKSTYNTNPSRNKPCVYCIGHEDECSEEIFRVPFDEPNWKIRVVESPNPAVLRSLDDGFVLDGGEVLDGFGIHDVVIESPVHSEQLLDLTPKDVGEVFVAFSNRIRELVHLESIKYVQVFKNHGEKAGAAMSHSHSQILGLPIVPNNVSARLGNMKDFFYQTGKCCICDIQLEDLLIDSSSYFFSLVPFAASFPFEIWVVPRYHSAHFHELDDEMALDLGGLMRTTLRKMSFQLNNPPYNFMIHTSPLRGDGSELAYSHWFIQIIPQLIPTTGFELGTGSHINPVLPEDAAKILREVIVPVFAHERRMVGFLPPTKIVDYSDAFTTKEVFPTREYLLNWARAIGREHGFTVIIQRSDNGGLKKRIGRKTTVILGCERSGKYRQYKDALARKTGTKKCGCPFRLRGRPVRNGDGWKVNVVCGFHNHEVIETAIGSTYAGRLSGEEKSLVDDLTRSNYKPKDILQTLKERNEENLTSIKQIYNLRQQLKRSRLELEMENSA*