AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0662170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0662170 MtrunA17_Chr4g0043411 96.949 590 18 0 1 590 1 590 0.0 1181
Msa0662170 MtrunA17_Chr2g0311581 55.276 635 198 17 1 590 1 594 0.0 596
Msa0662170 MtrunA17_Chr7g0259201 51.692 532 117 8 31 553 1 401 2.60e-165 477
Msa0662170 MtrunA17_Chr7g0259191 49.673 459 124 10 149 590 3 371 1.95e-110 335
Msa0662170 MtrunA17_Chr1g0205721 49.721 179 90 0 35 213 141 319 1.53e-57 196
Msa0662170 MtrunA17_Chr5g0422971 33.600 250 156 6 30 277 5 246 2.69e-41 154
Msa0662170 MtrunA17_Chr5g0397381 32.800 250 158 6 30 277 5 246 3.90e-40 151
Msa0662170 MtrunA17_Chr7g0235101 26.522 230 152 4 44 273 24 236 4.44e-20 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0662170 AT5G45190.1 55.519 607 186 14 1 582 1 548 0.0 597
Msa0662170 AT5G45190.2 54.045 618 189 15 1 582 1 559 0.0 580
Msa0662170 AT4G19600.1 55.705 596 171 13 1 586 1 513 0.0 576
Msa0662170 AT5G45190.3 51.205 498 158 14 111 582 1 439 9.96e-141 417
Msa0662170 AT4G19560.1 48.780 451 175 10 15 462 14 411 3.28e-116 353
Msa0662170 AT1G35440.1 50.607 247 113 2 34 278 7 246 9.21e-86 267
Msa0662170 AT1G27630.1 53.782 238 107 2 32 269 32 266 2.41e-85 269
Msa0662170 AT1G27630.4 53.712 229 103 2 32 260 32 257 9.38e-83 261
Msa0662170 AT4G19560.2 43.767 361 149 9 105 462 30 339 1.23e-67 225
Msa0662170 AT1G27630.6 49.457 184 90 2 86 269 1 181 5.41e-55 186
Msa0662170 AT1G27630.3 49.457 184 90 2 86 269 1 181 5.41e-55 186
Msa0662170 AT1G27630.5 49.457 184 90 2 86 269 1 181 5.41e-55 186
Msa0662170 AT1G27630.2 49.457 184 90 2 86 269 1 181 5.41e-55 186
Msa0662170 AT2G26430.1 33.200 250 157 6 30 277 5 246 1.03e-39 150
Msa0662170 AT2G26430.4 33.200 250 157 6 30 277 5 246 6.20e-37 139
Msa0662170 AT2G26430.3 31.313 198 127 5 82 277 1 191 2.11e-27 114
Msa0662170 AT2G26430.2 31.313 198 127 5 82 277 1 191 2.11e-27 114
Msa0662170 AT5G48630.1 26.009 223 148 4 51 273 31 236 1.33e-16 80.5
Msa0662170 AT5G48630.2 26.009 223 148 4 51 273 34 239 2.93e-16 79.3
Msa0662170 AT5G48640.1 25.854 205 135 3 68 272 48 235 1.27e-14 74.7
Msa0662170 AT5G48640.2 26.733 202 131 4 71 272 3 187 2.72e-14 72.4
Msa0662170 AT5G48640.5 23.626 182 122 2 91 272 3 167 1.20e-11 64.3
Msa0662170 AT5G48640.3 23.626 182 122 2 91 272 3 167 1.20e-11 64.3
Msa0662170 AT5G48640.4 23.626 182 122 2 91 272 3 167 1.20e-11 64.3

Find 176 sgRNAs with CRISPR-Local

Find 517 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCAATCTTGATTGCTTCTT+TGG 0.078252 4_3:-74099953 None:intergenic
CTGACGGAAGCTTCACTTTC+AGG 0.142810 4_3:-74099126 None:intergenic
AGCAACATTGAACTTCTTTA+TGG 0.142833 4_3:-74098892 None:intergenic
CTTCTGACATTTCTTAATTA+TGG 0.157184 4_3:+74100597 Msa0662170:three_prime_UTR
TCAAGACGTTTCTTCGTTTC+TGG 0.177305 4_3:-74100435 None:intergenic
TTCGTTTCTGGTTGACTTGC+TGG 0.211936 4_3:-74100423 None:intergenic
CCTAATTCTGTAGCCTCCTT+TGG 0.222544 4_3:-74099844 None:intergenic
GGAACGGGATGCCTCAATTT+TGG 0.233829 4_3:+74100618 Msa0662170:three_prime_UTR
CCAAAGGAGGCTACAGAATT+AGG 0.239989 4_3:+74099844 Msa0662170:CDS
TTAATAGCTTATGCTTTCTT+TGG 0.244097 4_3:+74100649 Msa0662170:three_prime_UTR
TTTAGTAGTTTCACTTCTTT+AGG 0.246738 4_3:-74100813 None:intergenic
GATGGATTCAATGCAGAAAA+AGG 0.254848 4_3:+74100339 Msa0662170:CDS
GCCACTTTAGCTGTAGTAAA+TGG 0.259714 4_3:+74100936 Msa0662170:three_prime_UTR
GTCTTTGTCAATCATCTTGT+TGG 0.262210 4_3:-74100100 None:intergenic
CTAATTCTGTAGCCTCCTTT+GGG 0.284087 4_3:-74099843 None:intergenic
CTCTCTCTCTATACTATTGT+TGG 0.287887 4_3:-74100877 None:intergenic
GAGAATTTCATGCTGTTGTC+AGG 0.291019 4_3:+74100683 Msa0662170:three_prime_UTR
TGTACATTCTTACAAGATTT+AGG 0.291338 4_3:+74095769 Msa0662170:CDS
TAATAGCTTATGCTTTCTTT+GGG 0.291700 4_3:+74100650 Msa0662170:three_prime_UTR
CTTGCAATTCACGAGGCTTC+AGG 0.292854 4_3:+74093923 Msa0662170:five_prime_UTR
GCCTCGACAAGGGGCTTATA+TGG 0.299564 4_3:-74098870 None:intergenic
CAAGGCTTTACACATATCTA+AGG 0.302357 4_3:+74100900 Msa0662170:three_prime_UTR
CTGCACTCCCATCATTGCTT+TGG 0.304701 4_3:-74099705 None:intergenic
TCAATCTTGATTGCTTCTTT+GGG 0.317346 4_3:-74099952 None:intergenic
GGCTTCTCTTCTCTACCTTC+TGG 0.319081 4_3:+74093944 Msa0662170:five_prime_UTR
GAATCGATGACAAAATATTA+TGG 0.323728 4_3:-74096228 None:intergenic
GGGTTAGTTGCACTGTTGAC+TGG 0.342169 4_3:-74095552 None:intergenic
GAAGCAGAAGGGGCTGCTGC+AGG 0.353238 4_3:+74099553 Msa0662170:CDS
GTTTCGTCGTGTTCGGCAAT+TGG 0.356817 4_3:-74093901 None:intergenic
CCCGACAAAGATAAACTTGT+TGG 0.366292 4_3:+74099799 Msa0662170:CDS
ACTCAAAATGAATTAGAATA+GGG 0.371597 4_3:+74100762 Msa0662170:three_prime_UTR
GAACTTGGCAGCAAGGAAAA+TGG 0.372793 4_3:-74099104 None:intergenic
TTTATTTGCTTAATGTGATA+AGG 0.377884 4_3:+74100545 Msa0662170:three_prime_UTR
ACATTTCTTAATTATGGAAC+GGG 0.377979 4_3:+74100603 Msa0662170:three_prime_UTR
TTATCACATTAAGCAAATAA+AGG 0.378007 4_3:-74100543 None:intergenic
CAATGATGGGAGTGCAGAAA+TGG 0.380246 4_3:+74099711 Msa0662170:CDS
CTTCAATGTTGGTCAAAATC+TGG 0.381107 4_3:+74099900 Msa0662170:CDS
TCCAACAAGTTTATCTTTGT+CGG 0.386957 4_3:-74099800 None:intergenic
TTTATCCTCTGTGCAGCAGC+AGG 0.390517 4_3:-74097651 None:intergenic
CAGACACAAGTGCTGCCATA+TGG 0.396129 4_3:-74095573 None:intergenic
AAGAAACACTAGCAGATTAC+TGG 0.397858 4_3:-74100788 None:intergenic
TATGATGTGGCTTAAATTGT+AGG 0.409195 4_3:-74099069 None:intergenic
GCTTCACTTCCTTGTGATTG+TGG 0.410396 4_3:-74099535 None:intergenic
TACTCAAAATGAATTAGAAT+AGG 0.411849 4_3:+74100761 Msa0662170:three_prime_UTR
TTCTGAGGTCTGAGAATCCC+TGG 0.414945 4_3:-74099770 None:intergenic
ATTGCAAGTTTCGTCGTGTT+CGG 0.419483 4_3:-74093908 None:intergenic
TGATGTCACCCCACGCCAAT+TGG 0.422376 4_3:+74099177 Msa0662170:CDS
GCATGGAACTTTGTTAATGA+TGG 0.427217 4_3:+74098936 Msa0662170:CDS
GAGGGTTGTACTTGCCACTT+TGG 0.427992 4_3:+74098824 Msa0662170:CDS
CCAACAAGTTTATCTTTGTC+GGG 0.428315 4_3:-74099799 None:intergenic
AAGCAGAAGGGGCTGCTGCA+GGG 0.429292 4_3:+74099554 Msa0662170:CDS
AGAGACTCCTCGTCCTCTTA+AGG 0.429831 4_3:+74097587 Msa0662170:CDS
AAGCTTCACTTTCAGGAACT+TGG 0.431818 4_3:-74099119 None:intergenic
TCACCATGATCTTCATCATC+AGG 0.433315 4_3:-74100291 None:intergenic
CGTCAGACGGTGAGAAGGTC+TGG 0.435777 4_3:+74099143 Msa0662170:CDS
CATATGGCAGCACTTGTGTC+TGG 0.444420 4_3:+74095574 Msa0662170:exon
ACCGAAAACCAAAGCAATGA+TGG 0.455608 4_3:+74099697 Msa0662170:CDS
ACCATTTACTACAGCTAAAG+TGG 0.456702 4_3:-74100937 None:intergenic
GACGATAAAGAAAGATGTAA+TGG 0.462192 4_3:+74100029 Msa0662170:CDS
GACATTAAAGAAAGATGTAA+TGG 0.462660 4_3:+74100170 Msa0662170:CDS
GGGAGCGAGAGCTGCTGCAA+GGG 0.466897 4_3:+74099576 Msa0662170:CDS
GATGGCACCAACCCTCCAAT+TGG 0.470978 4_3:-74099192 None:intergenic
ATGAGAATAACATCCTTAAG+AGG 0.474735 4_3:-74097600 None:intergenic
AGCAGAAGGGGCTGCTGCAG+GGG 0.477059 4_3:+74099555 Msa0662170:CDS
ACCTTGAGGAGGCTAGAGAC+GGG 0.482848 4_3:+74100316 Msa0662170:CDS
CGGTGAGAAGGTCTGGTGGC+AGG 0.483751 4_3:+74099150 Msa0662170:CDS
ATCCTTCCCATCCCCTTACT+CGG 0.488602 4_3:-74100481 None:intergenic
ACCAACCCTCCAATTGGCGT+GGG 0.488824 4_3:-74099186 None:intergenic
AAGAAGAAGCATTGGGTCGC+TGG 0.490936 4_3:+74095656 Msa0662170:CDS
AGAATTTCATGCTGTTGTCA+GGG 0.491351 4_3:+74100684 Msa0662170:three_prime_UTR
AATGCTCCGTCAAGAAAAGA+TGG 0.494895 4_3:+74095706 Msa0662170:CDS
TGGTCAAAATCTGGAGCGTC+GGG 0.495188 4_3:+74099909 Msa0662170:CDS
GCAGAAGGGGCTGCTGCAGG+GGG 0.499172 4_3:+74099556 Msa0662170:CDS
GACATTTCTTAATTATGGAA+CGG 0.500098 4_3:+74100602 Msa0662170:three_prime_UTR
GCTTGAAGATGGAGTAGAGT+TGG 0.501501 4_3:+74100218 Msa0662170:CDS
TTGCATTACTACCAAAATTG+AGG 0.502018 4_3:-74100713 None:intergenic
AAGCCACATCATATTGCGGC+AGG 0.507122 4_3:+74099079 Msa0662170:CDS
CTTTCAGGAACTTGGCAGCA+AGG 0.508345 4_3:-74099111 None:intergenic
GAGCGTCGGGAAGGCCCACT+TGG 0.512626 4_3:+74099922 Msa0662170:CDS
AGATAAGCAAGAAGAAGCAT+TGG 0.512627 4_3:+74095648 Msa0662170:CDS
ATTGAGAGGGAGCTTGAAGA+TGG 0.513193 4_3:+74100066 Msa0662170:CDS
ATTGAGAGGGAGCTTGAAGA+TGG 0.513193 4_3:+74100207 Msa0662170:CDS
AACAGTGCAACTAACCCATA+TGG 0.513524 4_3:+74095558 Msa0662170:exon
TTCTTTATGGCCTCGACAAG+GGG 0.513974 4_3:-74098879 None:intergenic
AGACACAAGTGCTGCCATAT+GGG 0.513981 4_3:-74095572 None:intergenic
AAAGAAAGATGTAATGGATG+AGG 0.521411 4_3:+74100035 Msa0662170:CDS
ACAAGATGGACTCGGAAACC+AGG 0.523113 4_3:+74099752 Msa0662170:CDS
TCCTGCGATGAGTGAAGAGC+AGG 0.524474 4_3:+74099600 Msa0662170:CDS
CAAGGGGCTTATATGGATGT+TGG 0.524723 4_3:-74098863 None:intergenic
CATGGAACTTTGTTAATGAT+GGG 0.529596 4_3:+74098937 Msa0662170:CDS
TGTCACCCCACGCCAATTGG+AGG 0.530719 4_3:+74099180 Msa0662170:CDS
GAACAATCGCAAGAGAAAGA+AGG 0.530737 4_3:+74100392 Msa0662170:CDS
TAGCTTATGCTTTCTTTGGG+GGG 0.531506 4_3:+74100653 Msa0662170:three_prime_UTR
TAATTGCACTACCAAAATTG+AGG 0.532832 4_3:-74100629 None:intergenic
GGGGAGCGAGAGCTGCTGCA+AGG 0.533292 4_3:+74099575 Msa0662170:CDS
TTGGTCAAAATCTGGAGCGT+CGG 0.534668 4_3:+74099908 Msa0662170:CDS
AATCAAGATTGACAAAGATA+AGG 0.536877 4_3:+74099963 Msa0662170:CDS
GACCTTGAGGAGGCTAGAGA+CGG 0.538134 4_3:+74100315 Msa0662170:CDS
CACCAACCCTCCAATTGGCG+TGG 0.539896 4_3:-74099187 None:intergenic
GGTTAGTTGCACTGTTGACT+GGG 0.542770 4_3:-74095551 None:intergenic
GGAGCGAGAGCTGCTGCAAG+GGG 0.545688 4_3:+74099577 Msa0662170:CDS
GCCTGCTCTTCACTCATCGC+AGG 0.545877 4_3:-74099601 None:intergenic
AATGATGGGAGTGCAGAAAT+GGG 0.546932 4_3:+74099712 Msa0662170:CDS
AACAAGTCTAGCTTCAATGT+TGG 0.549540 4_3:+74099889 Msa0662170:CDS
AGAAGTTAGCAATCAAATGT+TGG 0.552225 4_3:+74099489 Msa0662170:intron
GATAAGCAAGAAGAAGCATT+GGG 0.552512 4_3:+74095649 Msa0662170:CDS
AGAGAAACTTGTTGCCCCAA+AGG 0.553413 4_3:+74099828 Msa0662170:CDS
AGTTCCATGCAACTTGTGCA+AGG 0.554121 4_3:-74098923 None:intergenic
TCTGGAGAGTTGCCACATCA+TGG 0.557018 4_3:+74095592 Msa0662170:CDS
TTTCCACAGATGAGCACTGA+GGG 0.558715 4_3:-74099651 None:intergenic
CTTCTTTATGGCCTCGACAA+GGG 0.558922 4_3:-74098880 None:intergenic
CACAAGGAAGTGAAGCAGAA+GGG 0.559027 4_3:+74099542 Msa0662170:CDS
AACAATCGCAAGAGAAAGAA+GGG 0.561015 4_3:+74100393 Msa0662170:CDS
GGAAGATGCAGCAAAGGTCG+AGG 0.562151 4_3:-74093880 None:intergenic
CCCCGTCTCTAGCCTCCTCA+AGG 0.562396 4_3:-74100317 None:intergenic
GATTGACAAAGATAAGGTAA+AGG 0.564547 4_3:+74099969 Msa0662170:CDS
ATAGCTTATGCTTTCTTTGG+GGG 0.565752 4_3:+74100652 Msa0662170:three_prime_UTR
AATAGCTTATGCTTTCTTTG+GGG 0.570413 4_3:+74100651 Msa0662170:three_prime_UTR
ACTTCTTTATGGCCTCGACA+AGG 0.571121 4_3:-74098881 None:intergenic
TTATCCTCTGTGCAGCAGCA+GGG 0.572300 4_3:-74097650 None:intergenic
TTCCGAGTAAGGGGATGGGA+AGG 0.576072 4_3:+74100479 Msa0662170:exon
ACGCCCTTGCACAAGTTGCA+TGG 0.578134 4_3:+74098919 Msa0662170:CDS
TGATAAGGAATTGATGACTC+TGG 0.578618 4_3:+74100560 Msa0662170:three_prime_UTR
TAATTCTGTAGCCTCCTTTG+GGG 0.580016 4_3:-74099842 None:intergenic
AATAGTATAGAGAGAGAGCA+AGG 0.581744 4_3:+74100882 Msa0662170:three_prime_UTR
CCGAAAACCAAAGCAATGAT+GGG 0.583069 4_3:+74099698 Msa0662170:CDS
CCGTCAGATGCTCCATGATG+TGG 0.583282 4_3:-74095604 None:intergenic
CATAATTAAGAAATGTCAGA+AGG 0.586172 4_3:-74100596 None:intergenic
CAAAATCTGGAGCGTCGGGA+AGG 0.591685 4_3:+74099913 Msa0662170:CDS
CTTTGGGTGACTGACCAAGT+GGG 0.592539 4_3:-74099936 None:intergenic
AAAGTGAAGCTTCCGTCAGA+CGG 0.595709 4_3:+74099130 Msa0662170:CDS
CGAGGATGATCTCATTGAGA+GGG 0.600498 4_3:+74100194 Msa0662170:CDS
TCACAAGGAAGTGAAGCAGA+AGG 0.601746 4_3:+74099541 Msa0662170:CDS
TCCATATAAGCCCCTTGTCG+AGG 0.604206 4_3:+74098869 Msa0662170:CDS
GCTTCCGTCAGACGGTGAGA+AGG 0.605256 4_3:+74099138 Msa0662170:CDS
GTCACCCCACGCCAATTGGA+GGG 0.605796 4_3:+74099181 Msa0662170:CDS
ATTCAAGTCAAAAGCCAAAG+TGG 0.607668 4_3:-74098838 None:intergenic
ACAAGGAAGTGAAGCAGAAG+GGG 0.610265 4_3:+74099543 Msa0662170:CDS
GAATTTCATGCTGTTGTCAG+GGG 0.610576 4_3:+74100685 Msa0662170:three_prime_UTR
CTCATGCAAAGAATGACCGA+AGG 0.612140 4_3:+74096264 Msa0662170:CDS
CCACATCATGGAGCATCTGA+CGG 0.614623 4_3:+74095604 Msa0662170:CDS
GAAACTTGTTGCCCCAAAGG+AGG 0.614964 4_3:+74099831 Msa0662170:CDS
AGGAGGCTACAGAATTAGGA+AGG 0.615379 4_3:+74099848 Msa0662170:CDS
GAGGAGGCTAGAGACGGGGA+TGG 0.615541 4_3:+74100321 Msa0662170:CDS
GCAATTGGAAGATGCAGCAA+AGG 0.615685 4_3:-74093886 None:intergenic
TCTTTGGGTGACTGACCAAG+TGG 0.615707 4_3:-74099937 None:intergenic
TGAGGATGATCTCATTGAGA+GGG 0.615735 4_3:+74100053 Msa0662170:CDS
TGACATTACTGATCACAAGA+TGG 0.617081 4_3:+74099738 Msa0662170:CDS
AGATCATGGTGAGGACCTTG+AGG 0.617441 4_3:+74100302 Msa0662170:CDS
TCCACAGATGAGCACTGAGG+GGG 0.619491 4_3:-74099649 None:intergenic
GCTGTTGCTATAGTTACTTG+AGG 0.621138 4_3:-74096206 None:intergenic
CAGACCTTCTCACCGTCTGA+CGG 0.622614 4_3:-74099142 None:intergenic
AAGGCTTTACACATATCTAA+GGG 0.624719 4_3:+74100901 Msa0662170:three_prime_UTR
GTTCCATGCAACTTGTGCAA+GGG 0.625785 4_3:-74098922 None:intergenic
ATGAGGATGATCTCATTGAG+AGG 0.630170 4_3:+74100052 Msa0662170:CDS
AAAGAAAGATGTAATGGACG+AGG 0.631127 4_3:+74100176 Msa0662170:CDS
AAGCCTGATGATGAAGATCA+TGG 0.631489 4_3:+74100288 Msa0662170:CDS
ATAACATCCTTAAGAGGACG+AGG 0.631649 4_3:-74097594 None:intergenic
ACGAGGATGATCTCATTGAG+AGG 0.632466 4_3:+74100193 Msa0662170:CDS
CAAGATGGACTCGGAAACCA+GGG 0.633256 4_3:+74099753 Msa0662170:CDS
ATTTAAGCCACATCATATTG+CGG 0.635161 4_3:+74099075 Msa0662170:CDS
AATTTCATGCTGTTGTCAGG+GGG 0.638756 4_3:+74100686 Msa0662170:three_prime_UTR
TACTGATCACAAGATGGACT+CGG 0.641859 4_3:+74099744 Msa0662170:CDS
TGCACAGAGGATAAAACAGA+AGG 0.652187 4_3:+74097659 Msa0662170:CDS
TCATGCAAAGAATGACCGAA+GGG 0.662631 4_3:+74096265 Msa0662170:CDS
CCTTGAGGAGGCTAGAGACG+GGG 0.664202 4_3:+74100317 Msa0662170:CDS
CCAACCCTCCAATTGGCGTG+GGG 0.665875 4_3:-74099185 None:intergenic
TCATGGTGAGGACCTTGAGG+AGG 0.679281 4_3:+74100305 Msa0662170:CDS
GACGAAACTTGCAATTCACG+AGG 0.693484 4_3:+74093916 Msa0662170:five_prime_UTR
TTCCACAGATGAGCACTGAG+GGG 0.694472 4_3:-74099650 None:intergenic
AATAGAATTCCACAATCACA+AGG 0.696079 4_3:+74099526 Msa0662170:CDS
TGATGATGAAGATCATGGTG+AGG 0.696108 4_3:+74100293 Msa0662170:CDS
CAGACGGTGAGAAGGTCTGG+TGG 0.696264 4_3:+74099146 Msa0662170:CDS
GCACCTGCCGCAATATGATG+TGG 0.706575 4_3:-74099082 None:intergenic
AAGACCCTGCTGCTGCACAG+AGG 0.732068 4_3:+74097646 Msa0662170:CDS
AATCTGAAACACAAATAACG+TGG 0.755631 4_3:+74093801 Msa0662170:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAATATGTTTATATTTG+TGG + chr4_3:74096054-74096073 Msa0662170:intron 10.0%
!!! ATATTCTAAAAATATGTTTA+AGG + chr4_3:74097109-74097128 Msa0662170:intron 10.0%
!!! GTTGATTATTTTTTTTTTTT+GGG + chr4_3:74097316-74097335 Msa0662170:intron 10.0%
!!! TTTATTGAATTCATTTTAAT+AGG + chr4_3:74098995-74099014 Msa0662170:intron 10.0%
!! ATTTCAATTTCAATTTCAAT+TGG + chr4_3:74094094-74094113 Msa0662170:intron 15.0%
!! TTTCAATTTCAATTTCAATT+GGG + chr4_3:74094095-74094114 Msa0662170:intron 15.0%
!! AACAAAATAATGAATATCAT+TGG - chr4_3:74095469-74095488 None:intergenic 15.0%
!! GAATAGGAAATAAATATTTA+CGG - chr4_3:74096134-74096153 None:intergenic 15.0%
!!! GGTTGATTATTTTTTTTTTT+TGG + chr4_3:74097315-74097334 Msa0662170:intron 15.0%
!! AAACTTAAAAGAATACTTAT+TGG + chr4_3:74097487-74097506 Msa0662170:intron 15.0%
!! AACTTAAAAGAATACTTATT+GGG + chr4_3:74097488-74097507 Msa0662170:intron 15.0%
!! AATAAATAGAATTAATTGCA+TGG + chr4_3:74098549-74098568 Msa0662170:intron 15.0%
!! TCAACAAACAAATATAATAA+GGG - chr4_3:74098741-74098760 None:intergenic 15.0%
!! TTCAACAAACAAATATAATA+AGG - chr4_3:74098742-74098761 None:intergenic 15.0%
!! AAGTTTACTATTATTTAAAC+AGG + chr4_3:74099395-74099414 Msa0662170:intron 15.0%
!! GAATTCGTATATTAAATGTT+GGG + chr4_3:74094278-74094297 Msa0662170:intron 20.0%
!!! TTTTCTATAATCTCATGATT+TGG + chr4_3:74095253-74095272 Msa0662170:intron 20.0%
!! TTTCTATAATCTCATGATTT+GGG + chr4_3:74095254-74095273 Msa0662170:intron 20.0%
!! TTACATGCATATTATGTATT+TGG + chr4_3:74095853-74095872 Msa0662170:intron 20.0%
!!! AAATTGCTTTTAAATGTACT+TGG + chr4_3:74096094-74096113 Msa0662170:intron 20.0%
!!! AATTGCTTTTAAATGTACTT+GGG + chr4_3:74096095-74096114 Msa0662170:intron 20.0%
!!! CTTTCAAATAGATATTTTGT+AGG + chr4_3:74096297-74096316 Msa0662170:intron 20.0%
!! AAAAAAATTCAAAACCAAAC+AGG - chr4_3:74096551-74096570 None:intergenic 20.0%
!!! AGATAGCTCAAATTTTAAAA+TGG + chr4_3:74096729-74096748 Msa0662170:intron 20.0%
!!! ATGCTAATTACAATTTTAGT+TGG + chr4_3:74096975-74096994 Msa0662170:intron 20.0%
!! AACAAATTTCAATATTGAGA+AGG - chr4_3:74097078-74097097 None:intergenic 20.0%
!! AAAAACTCAACTTAAAAACA+TGG - chr4_3:74097226-74097245 None:intergenic 20.0%
!! ATCTATCATTCATATAAACT+AGG - chr4_3:74097454-74097473 None:intergenic 20.0%
!!! TTTTTTTGCTTGTATTTGAA+AGG - chr4_3:74098047-74098066 None:intergenic 20.0%
!! ATATGAATAAAAGAGGTTAT+TGG + chr4_3:74098397-74098416 Msa0662170:intron 20.0%
!! TAAGCATGATATCATTAAAT+AGG + chr4_3:74098445-74098464 Msa0662170:intron 20.0%
!! AAGCATGATATCATTAAATA+GGG + chr4_3:74098446-74098465 Msa0662170:intron 20.0%
!! AATCACAAAAATTTCGAATT+CGG - chr4_3:74098507-74098526 None:intergenic 20.0%
!!! TTTGTGATTATATTTGAAAC+TGG + chr4_3:74098518-74098537 Msa0662170:intron 20.0%
!! ATAGAATTTGTAAATGATGT+AGG + chr4_3:74098761-74098780 Msa0662170:intron 20.0%
!!! CAGAAAGAATTAATTTTACT+TGG + chr4_3:74098798-74098817 Msa0662170:CDS 20.0%
!! TTATCACATTAAGCAAATAA+AGG - chr4_3:74100546-74100565 None:intergenic 20.0%
!! TTTATTTGCTTAATGTGATA+AGG + chr4_3:74100545-74100564 Msa0662170:three_prime_UTR 20.0%
!!! ATTTTGAGTAATTCTTAACA+GGG - chr4_3:74100751-74100770 None:intergenic 20.0%
!! TACTCAAAATGAATTAGAAT+AGG + chr4_3:74100761-74100780 Msa0662170:three_prime_UTR 20.0%
!! ACTCAAAATGAATTAGAATA+GGG + chr4_3:74100762-74100781 Msa0662170:three_prime_UTR 20.0%
! AGATAAAGAAAACAAATCGA+AGG - chr4_3:74093983-74094002 None:intergenic 25.0%
!!! TTTATTGATTCAAACCCTAT+CGG + chr4_3:74094164-74094183 Msa0662170:intron 25.0%
! TAAAAATCTTATCTGAGTTG+TGG + chr4_3:74094256-74094275 Msa0662170:intron 25.0%
! GGAATTCGTATATTAAATGT+TGG + chr4_3:74094277-74094296 Msa0662170:intron 25.0%
!! GTTTTACACAAATTTGACAA+AGG - chr4_3:74094314-74094333 None:intergenic 25.0%
! ATTTGTGTAAAACGAAGATT+AGG + chr4_3:74094321-74094340 Msa0662170:intron 25.0%
! TTTGTGTAAAACGAAGATTA+GGG + chr4_3:74094322-74094341 Msa0662170:intron 25.0%
!!! AACGAACAGTTTTGAAAATT+AGG + chr4_3:74094359-74094378 Msa0662170:intron 25.0%
!! AGTATACACTGAATGTTTTT+CGG + chr4_3:74094502-74094521 Msa0662170:intron 25.0%
! AAAAAACCTATTTCCTATAC+AGG - chr4_3:74094692-74094711 None:intergenic 25.0%
! TGATTGCACAAATAATTGAT+GGG - chr4_3:74094734-74094753 None:intergenic 25.0%
! ATGATTGCACAAATAATTGA+TGG - chr4_3:74094735-74094754 None:intergenic 25.0%
! CAATCATATGCTATCTTTAT+GGG + chr4_3:74094748-74094767 Msa0662170:intron 25.0%
!!! GATTTTTGTCATTTTCATCT+GGG + chr4_3:74094770-74094789 Msa0662170:intron 25.0%
!!! ATTTTTGTCATTTTCATCTG+GGG + chr4_3:74094771-74094790 Msa0662170:intron 25.0%
! AAAAACCCTATTTCCTATAT+GGG - chr4_3:74094911-74094930 None:intergenic 25.0%
! AAAAAACCCTATTTCCTATA+TGG - chr4_3:74094912-74094931 None:intergenic 25.0%
!! ATGCAATGTATTTAAAATCG+AGG - chr4_3:74095332-74095351 None:intergenic 25.0%
! AAATAATGAATATCATTGGC+CGG - chr4_3:74095465-74095484 None:intergenic 25.0%
! TGTACATTCTTACAAGATTT+AGG + chr4_3:74095769-74095788 Msa0662170:CDS 25.0%
! ATACATAATATGCATGTAAC+TGG - chr4_3:74095852-74095871 None:intergenic 25.0%
!!! ATGTATTTGGAATTCTTTTG+AGG + chr4_3:74095866-74095885 Msa0662170:intron 25.0%
!!! TGTATTTGGAATTCTTTTGA+GGG + chr4_3:74095867-74095886 Msa0662170:intron 25.0%
!! CATACGATTTTGTATCTTAA+TGG + chr4_3:74095938-74095957 Msa0662170:intron 25.0%
! TCCTATTCTTGAAATTCAAT+TGG + chr4_3:74096146-74096165 Msa0662170:intron 25.0%
! TCCAATTGAATTTCAAGAAT+AGG - chr4_3:74096150-74096169 None:intergenic 25.0%
! TATTCTTGAAATTCAATTGG+AGG + chr4_3:74096149-74096168 Msa0662170:intron 25.0%
! GAATCGATGACAAAATATTA+TGG - chr4_3:74096231-74096250 None:intergenic 25.0%
! TCAAATTAAAAACAACACAC+AGG - chr4_3:74096443-74096462 None:intergenic 25.0%
! AAATAGTTCTTACAAAGCTT+AGG + chr4_3:74096665-74096684 Msa0662170:intron 25.0%
! CTTAAAGACATTCAAGAAAA+AGG - chr4_3:74097249-74097268 None:intergenic 25.0%
!!! TAGTCAAATTTGCACTTTTT+GGG + chr4_3:74097292-74097311 Msa0662170:intron 25.0%
!!! AGAAGGTGTTTTAATATTGT+TGG + chr4_3:74097676-74097695 Msa0662170:intron 25.0%
! CACAGATAAATCAAGAAATT+GGG - chr4_3:74097735-74097754 None:intergenic 25.0%
! TCACAGATAAATCAAGAAAT+TGG - chr4_3:74097736-74097755 None:intergenic 25.0%
! GAAAAGCAAGAAAAAAATGT+TGG - chr4_3:74097782-74097801 None:intergenic 25.0%
!! ACTCAGTTTAAGACTATAAT+TGG - chr4_3:74097810-74097829 None:intergenic 25.0%
! TGTATAGGATTTCAATATTG+AGG - chr4_3:74097950-74097969 None:intergenic 25.0%
! TGTTTCATGTGTTGAAATTT+AGG + chr4_3:74098160-74098179 Msa0662170:intron 25.0%
! GTTTCATGTGTTGAAATTTA+GGG + chr4_3:74098161-74098180 Msa0662170:intron 25.0%
! TCCAACAATATGAATAAAAG+AGG + chr4_3:74098390-74098409 Msa0662170:intron 25.0%
!! ACCTCTTTTATTCATATTGT+TGG - chr4_3:74098394-74098413 None:intergenic 25.0%
! AGAGCAACTATAGAATAAAA+TGG - chr4_3:74098610-74098629 None:intergenic 25.0%
! ATAAACAAAATACAAAGAGC+GGG - chr4_3:74098708-74098727 None:intergenic 25.0%
! GATAAACAAAATACAAAGAG+CGG - chr4_3:74098709-74098728 None:intergenic 25.0%
! AACAAATATAATAAGGGTCA+TGG - chr4_3:74098735-74098754 None:intergenic 25.0%
!! AATTAATTTTACTTGGAGAG+AGG + chr4_3:74098805-74098824 Msa0662170:CDS 25.0%
!! ATTAATTTTACTTGGAGAGA+GGG + chr4_3:74098806-74098825 Msa0662170:CDS 25.0%
! AAGTAAAATTAGAACAAGTG+TGG - chr4_3:74098977-74098996 None:intergenic 25.0%
! TTAGTATGCAAATGAATTGA+GGG - chr4_3:74099218-74099237 None:intergenic 25.0%
! AAAAAGCCTAATGAAAAAGT+GGG - chr4_3:74099369-74099388 None:intergenic 25.0%
! AAAAAAGCCTAATGAAAAAG+TGG - chr4_3:74099370-74099389 None:intergenic 25.0%
! AATCAAGATTGACAAAGATA+AGG + chr4_3:74099963-74099982 Msa0662170:CDS 25.0%
! TAAAGGCCATATTAGAAAAA+AGG + chr4_3:74099986-74100005 Msa0662170:CDS 25.0%
!!! CTTTCTCCTTTTTTCTAATA+TGG - chr4_3:74099995-74100014 None:intergenic 25.0%
! CATATTAGAAAAAAGGAGAA+AGG + chr4_3:74099993-74100012 Msa0662170:CDS 25.0%
! GACATTAAAGAAAGATGTAA+TGG + chr4_3:74100170-74100189 Msa0662170:CDS 25.0%
! GGAAAAATCATTGTGATAAT+TGG - chr4_3:74100463-74100482 None:intergenic 25.0%
!! GAAGAGAAAAATATTTGTTG+AGG + chr4_3:74100505-74100524 Msa0662170:three_prime_UTR 25.0%
! CATAATTAAGAAATGTCAGA+AGG - chr4_3:74100599-74100618 None:intergenic 25.0%
! CTTCTGACATTTCTTAATTA+TGG + chr4_3:74100597-74100616 Msa0662170:three_prime_UTR 25.0%
! GACATTTCTTAATTATGGAA+CGG + chr4_3:74100602-74100621 Msa0662170:three_prime_UTR 25.0%
! ACATTTCTTAATTATGGAAC+GGG + chr4_3:74100603-74100622 Msa0662170:three_prime_UTR 25.0%
! TTAATAGCTTATGCTTTCTT+TGG + chr4_3:74100649-74100668 Msa0662170:three_prime_UTR 25.0%
! TAATAGCTTATGCTTTCTTT+GGG + chr4_3:74100650-74100669 Msa0662170:three_prime_UTR 25.0%
!!! CATTTTGAGTAATTCTTAAC+AGG - chr4_3:74100752-74100771 None:intergenic 25.0%
! TTTAGTAGTTTCACTTCTTT+AGG - chr4_3:74100816-74100835 None:intergenic 25.0%
! AATCTGAAACACAAATAACG+TGG + chr4_3:74093801-74093820 Msa0662170:five_prime_UTR 30.0%
CAAAATCGAAAAAACGAAAG+AGG - chr4_3:74094016-74094035 None:intergenic 30.0%
GTATGAGATAAAGCGATAAA+TGG - chr4_3:74094058-74094077 None:intergenic 30.0%
!! TGAATGTTTTTCGGTGAAAT+TGG + chr4_3:74094511-74094530 Msa0662170:intron 30.0%
!! GAATGTTTTTCGGTGAAATT+GGG + chr4_3:74094512-74094531 Msa0662170:intron 30.0%
!!! AAAAACCTGTTTTTACATGC+AGG + chr4_3:74094626-74094645 Msa0662170:intron 30.0%
AGAAAACCTGTATAGGAAAT+AGG + chr4_3:74094683-74094702 Msa0662170:intron 30.0%
!!! TGATGGGCTTGTTTTTTTAA+GGG - chr4_3:74094718-74094737 None:intergenic 30.0%
!!! TTGATGGGCTTGTTTTTTTA+AGG - chr4_3:74094719-74094738 None:intergenic 30.0%
GCAATCATATGCTATCTTTA+TGG + chr4_3:74094747-74094766 Msa0662170:intron 30.0%
!!! GGATTTTTGTCATTTTCATC+TGG + chr4_3:74094769-74094788 Msa0662170:intron 30.0%
!!! AAAAGACCTGTTTTTACATG+CGG + chr4_3:74094844-74094863 Msa0662170:intron 30.0%
AGAAAACCCATATAGGAAAT+AGG + chr4_3:74094902-74094921 Msa0662170:intron 30.0%
GAAAACCCATATAGGAAATA+GGG + chr4_3:74094903-74094922 Msa0662170:intron 30.0%
AAAAAGTTGTAGGGAACATA+GGG - chr4_3:74095018-74095037 None:intergenic 30.0%
! GTTTTGCGCAAAATTTGAAA+GGG - chr4_3:74095310-74095329 None:intergenic 30.0%
!!! CCTTTGCTATTGATTTTGTA+CGG + chr4_3:74095407-74095426 Msa0662170:intron 30.0%
AATAATGAATATCATTGGCC+GGG - chr4_3:74095464-74095483 None:intergenic 30.0%
! TCAATTCCATCTTTTCTTGA+CGG - chr4_3:74095715-74095734 None:intergenic 30.0%
!! GTATTTGGAATTCTTTTGAG+GGG + chr4_3:74095868-74095887 Msa0662170:intron 30.0%
ATGCAACTTACAAAAGATCA+GGG - chr4_3:74096334-74096353 None:intergenic 30.0%
AATGCAACTTACAAAAGATC+AGG - chr4_3:74096335-74096354 None:intergenic 30.0%
!!! AGTTGCATTTTGATTTAGTG+TGG + chr4_3:74096346-74096365 Msa0662170:intron 30.0%
TGTTTGTGCAATTGATATAG+TGG + chr4_3:74096371-74096390 Msa0662170:intron 30.0%
AACTCATAGTTTAAGAGCTT+CGG - chr4_3:74096695-74096714 None:intergenic 30.0%
AAGCTCTTAAACTATGAGTT+GGG + chr4_3:74096695-74096714 Msa0662170:intron 30.0%
CTATAGAAGAACAACAAATC+TGG - chr4_3:74097168-74097187 None:intergenic 30.0%
!! CAGATTTGTTGTTCTTCTAT+AGG + chr4_3:74097166-74097185 Msa0662170:intron 30.0%
! GTAGTCAAATTTGCACTTTT+TGG + chr4_3:74097291-74097310 Msa0662170:intron 30.0%
!! AGTCAAATTTGCACTTTTTG+GGG + chr4_3:74097293-74097312 Msa0662170:intron 30.0%
!! GTATTTGTGTAAGTTGATTG+TGG + chr4_3:74097421-74097440 Msa0662170:intron 30.0%
TGCAAAAGAAATTCGTCAAT+TGG - chr4_3:74097525-74097544 None:intergenic 30.0%
ATGAGAATAACATCCTTAAG+AGG - chr4_3:74097603-74097622 None:intergenic 30.0%
ATCTGTGATCTTATTGCTAT+TGG + chr4_3:74097748-74097767 Msa0662170:intron 30.0%
! TCATAATTTGTGCTCAAACA+TGG + chr4_3:74097915-74097934 Msa0662170:intron 30.0%
! GTTTTCGTATGTCTTTTACT+CGG + chr4_3:74097997-74098016 Msa0662170:intron 30.0%
! TTTTCGTATGTCTTTTACTC+GGG + chr4_3:74097998-74098017 Msa0662170:intron 30.0%
GTATTTGAAAGGAAACAGAA+TGG - chr4_3:74098036-74098055 None:intergenic 30.0%
TAACTCATCCTTACAAAAAC+CGG + chr4_3:74098186-74098205 Msa0662170:intron 30.0%
CTTGAGAAGAGTTTATAAAG+AGG - chr4_3:74098233-74098252 None:intergenic 30.0%
TAAACAAAATACAAAGAGCG+GGG - chr4_3:74098707-74098726 None:intergenic 30.0%
AGCAACATTGAACTTCTTTA+TGG - chr4_3:74098895-74098914 None:intergenic 30.0%
CATGGAACTTTGTTAATGAT+GGG + chr4_3:74098937-74098956 Msa0662170:CDS 30.0%
TATGATGTGGCTTAAATTGT+AGG - chr4_3:74099072-74099091 None:intergenic 30.0%
ATTTAAGCCACATCATATTG+CGG + chr4_3:74099075-74099094 Msa0662170:CDS 30.0%
TAGTATGCAAATGAATTGAG+GGG - chr4_3:74099217-74099236 None:intergenic 30.0%
CTTAGTATGCAAATGAATTG+AGG - chr4_3:74099219-74099238 None:intergenic 30.0%
! ACTAAGAAAGTTGATCCAAT+TGG + chr4_3:74099233-74099252 Msa0662170:intron 30.0%
AACACACAAAACTATCCAAT+TGG - chr4_3:74099251-74099270 None:intergenic 30.0%
!!! AATTGGATAGTTTTGTGTGT+TGG + chr4_3:74099250-74099269 Msa0662170:intron 30.0%
CCTAACTTGATATGAAAACA+GGG - chr4_3:74099326-74099345 None:intergenic 30.0%
ACCTAACTTGATATGAAAAC+AGG - chr4_3:74099327-74099346 None:intergenic 30.0%
AGAAGTTAGCAATCAAATGT+TGG + chr4_3:74099489-74099508 Msa0662170:intron 30.0%
AATAGAATTCCACAATCACA+AGG + chr4_3:74099526-74099545 Msa0662170:CDS 30.0%
TCCAACAAGTTTATCTTTGT+CGG - chr4_3:74099803-74099822 None:intergenic 30.0%
TCAATCTTGATTGCTTCTTT+GGG - chr4_3:74099955-74099974 None:intergenic 30.0%
GATTGACAAAGATAAGGTAA+AGG + chr4_3:74099969-74099988 Msa0662170:CDS 30.0%
GACGATAAAGAAAGATGTAA+TGG + chr4_3:74100029-74100048 Msa0662170:CDS 30.0%
!! AAAGAAAGATGTAATGGATG+AGG + chr4_3:74100035-74100054 Msa0662170:CDS 30.0%
!!! CTTTCTCATTTTTTCTAACG+CGG - chr4_3:74100136-74100155 None:intergenic 30.0%
ATGGATTCAATGCAGAAAAA+GGG + chr4_3:74100340-74100359 Msa0662170:CDS 30.0%
! ACAATGATTTTTCCGAGTAA+GGG + chr4_3:74100469-74100488 Msa0662170:CDS 30.0%
TAATTGCACTACCAAAATTG+AGG - chr4_3:74100632-74100651 None:intergenic 30.0%
AATAGCTTATGCTTTCTTTG+GGG + chr4_3:74100651-74100670 Msa0662170:three_prime_UTR 30.0%
TTGCATTACTACCAAAATTG+AGG - chr4_3:74100716-74100735 None:intergenic 30.0%
! CTGAATCTTTACTGCATTTT+TGG - chr4_3:74100852-74100871 None:intergenic 30.0%
AAGGCTTTACACATATCTAA+GGG + chr4_3:74100901-74100920 Msa0662170:three_prime_UTR 30.0%
GAAAACAAATCGAAGGAACT+GGG - chr4_3:74093976-74093995 None:intergenic 35.0%
AGAAAACAAATCGAAGGAAC+TGG - chr4_3:74093977-74093996 None:intergenic 35.0%
! AAAACGAAAGAGGCGTAAAA+AGG - chr4_3:74094006-74094025 None:intergenic 35.0%
! GGGTTGATTAATTTCCCAAA+CGG - chr4_3:74094216-74094235 None:intergenic 35.0%
GTAAAACGAAGATTAGGGTT+TGG + chr4_3:74094327-74094346 Msa0662170:intron 35.0%
ACTAACCTGCATGTAAAAAC+AGG - chr4_3:74094634-74094653 None:intergenic 35.0%
!!! AAAGACCTGTTTTTACATGC+GGG + chr4_3:74094845-74094864 Msa0662170:intron 35.0%
GGTCATAAGAAAACCCATAT+AGG + chr4_3:74094895-74094914 Msa0662170:intron 35.0%
GAAAAAGTTGTAGGGAACAT+AGG - chr4_3:74095019-74095038 None:intergenic 35.0%
ACTGGACAGAAAAAGTTGTA+GGG - chr4_3:74095027-74095046 None:intergenic 35.0%
! GGTTTTGCGCAAAATTTGAA+AGG - chr4_3:74095311-74095330 None:intergenic 35.0%
GCATACATGTAATTGATGTG+CGG + chr4_3:74095348-74095367 Msa0662170:intron 35.0%
CATACATGTAATTGATGTGC+GGG + chr4_3:74095349-74095368 Msa0662170:intron 35.0%
ATACATGTAATTGATGTGCG+GGG + chr4_3:74095350-74095369 Msa0662170:intron 35.0%
CCGTACAAAATCAATAGCAA+AGG - chr4_3:74095410-74095429 None:intergenic 35.0%
GTTATAGCACTCTAAATTCC+CGG + chr4_3:74095443-74095462 Msa0662170:intron 35.0%
ATCAACAAGCAGAAAGATTC+TGG - chr4_3:74095507-74095526 None:intergenic 35.0%
! AGATAAGCAAGAAGAAGCAT+TGG + chr4_3:74095648-74095667 Msa0662170:CDS 35.0%
!! GATAAGCAAGAAGAAGCATT+GGG + chr4_3:74095649-74095668 Msa0662170:CDS 35.0%
CAAAATCGTATGTGTATGAG+AGG - chr4_3:74095930-74095949 None:intergenic 35.0%
!! CGCTTTAAGATTGCATAGTT+GGG - chr4_3:74095968-74095987 None:intergenic 35.0%
TGCAACTTACAAAAGATCAG+GGG - chr4_3:74096333-74096352 None:intergenic 35.0%
TTGAAGTTGAAATGCTGTGT+TGG + chr4_3:74096473-74096492 Msa0662170:intron 35.0%
ATCAAGACACACAAGTTCTA+GGG - chr4_3:74096630-74096649 None:intergenic 35.0%
GAAGCTCTTAAACTATGAGT+TGG + chr4_3:74096694-74096713 Msa0662170:intron 35.0%
AGCTCTTAAACTATGAGTTG+GGG + chr4_3:74096696-74096715 Msa0662170:intron 35.0%
TATGATCCAACAGCAAATCT+AGG - chr4_3:74096768-74096787 None:intergenic 35.0%
TCCCATATCAACTAGAGATA+TGG + chr4_3:74096841-74096860 Msa0662170:intron 35.0%
! CCCATATCTCTAGTTGATAT+GGG - chr4_3:74096845-74096864 None:intergenic 35.0%
CCCATATCAACTAGAGATAT+GGG + chr4_3:74096842-74096861 Msa0662170:intron 35.0%
! CACAAATTTCTGACAGCTTT+TGG - chr4_3:74096946-74096965 None:intergenic 35.0%
TATTCTTGCAAAGCTCAAGT+TGG + chr4_3:74097028-74097047 Msa0662170:intron 35.0%
!! GTCAAATTTGCACTTTTTGG+GGG + chr4_3:74097294-74097313 Msa0662170:intron 35.0%
AGAACACTTTGAGTAGAAGT+TGG - chr4_3:74097365-74097384 None:intergenic 35.0%
! TGCTACAGTTTGCATGTTTT+TGG + chr4_3:74097551-74097570 Msa0662170:CDS 35.0%
CTAGAAACTGACAAATTGGA+GGG - chr4_3:74097874-74097893 None:intergenic 35.0%
ATGCCTAGAAACTGACAAAT+TGG - chr4_3:74097878-74097897 None:intergenic 35.0%
AGGCATCACATCATCTATAT+TGG + chr4_3:74097892-74097911 Msa0662170:intron 35.0%
GAGCTACAAAAACACTGTAT+AGG - chr4_3:74097965-74097984 None:intergenic 35.0%
CATGAAACAGATTTCCATGA+AGG - chr4_3:74098149-74098168 None:intergenic 35.0%
! GGTTTTTGTAAGGATGAGTT+AGG - chr4_3:74098187-74098206 None:intergenic 35.0%
GAGAAGAGTTTATAAAGAGG+AGG - chr4_3:74098230-74098249 None:intergenic 35.0%
AGTTCTATATCTATCCGATG+TGG + chr4_3:74098253-74098272 Msa0662170:intron 35.0%
GTTCTATATCTATCCGATGT+GGG + chr4_3:74098254-74098273 Msa0662170:intron 35.0%
CTAACTAAATGTCGCAACTT+AGG + chr4_3:74098334-74098353 Msa0662170:intron 35.0%
CACAAAAATTTCGAATTCGG+TGG - chr4_3:74098504-74098523 None:intergenic 35.0%
TATAGCAGTTTGAGTGCAAT+GGG - chr4_3:74098640-74098659 None:intergenic 35.0%
ATATAGCAGTTTGAGTGCAA+TGG - chr4_3:74098641-74098660 None:intergenic 35.0%
GCACTCAAACTGCTATATAT+CGG + chr4_3:74098643-74098662 Msa0662170:intron 35.0%
ATTCAAGTCAAAAGCCAAAG+TGG - chr4_3:74098841-74098860 None:intergenic 35.0%
GCATGGAACTTTGTTAATGA+TGG + chr4_3:74098936-74098955 Msa0662170:CDS 35.0%
!!! TAGGTTTTTTGTTCACACAC+TGG + chr4_3:74099014-74099033 Msa0662170:intron 35.0%
! CCCTGTTTTCATATCAAGTT+AGG + chr4_3:74099323-74099342 Msa0662170:intron 35.0%
TTAAACAGGATGCTATCCTT+CGG + chr4_3:74099409-74099428 Msa0662170:intron 35.0%
TGACATTACTGATCACAAGA+TGG + chr4_3:74099738-74099757 Msa0662170:CDS 35.0%
CCAACAAGTTTATCTTTGTC+GGG - chr4_3:74099802-74099821 None:intergenic 35.0%
! AACAAGTCTAGCTTCAATGT+TGG + chr4_3:74099889-74099908 Msa0662170:CDS 35.0%
CTTCAATGTTGGTCAAAATC+TGG + chr4_3:74099900-74099919 Msa0662170:CDS 35.0%
GTCAATCTTGATTGCTTCTT+TGG - chr4_3:74099956-74099975 None:intergenic 35.0%
AAAAAAGGAGAAAGGAACGA+GGG + chr4_3:74100001-74100020 Msa0662170:CDS 35.0%
GTCTTTGTCAATCATCTTGT+TGG - chr4_3:74100103-74100122 None:intergenic 35.0%
CGCGTTAGAAAAAATGAGAA+AGG + chr4_3:74100134-74100153 Msa0662170:CDS 35.0%
GAAAAAATGAGAAAGGAACG+AGG + chr4_3:74100141-74100160 Msa0662170:CDS 35.0%
!! AAAGAAAGATGTAATGGACG+AGG + chr4_3:74100176-74100195 Msa0662170:CDS 35.0%
! GATGGATTCAATGCAGAAAA+AGG + chr4_3:74100339-74100358 Msa0662170:CDS 35.0%
TGGATTCAATGCAGAAAAAG+GGG + chr4_3:74100341-74100360 Msa0662170:CDS 35.0%
AACAATCGCAAGAGAAAGAA+GGG + chr4_3:74100393-74100412 Msa0662170:CDS 35.0%
! CACAATGATTTTTCCGAGTA+AGG + chr4_3:74100468-74100487 Msa0662170:CDS 35.0%
! CAATGATTTTTCCGAGTAAG+GGG + chr4_3:74100470-74100489 Msa0662170:exon 35.0%
! TGATAAGGAATTGATGACTC+TGG + chr4_3:74100560-74100579 Msa0662170:three_prime_UTR 35.0%
ATAGCTTATGCTTTCTTTGG+GGG + chr4_3:74100652-74100671 Msa0662170:three_prime_UTR 35.0%
AGAATTTCATGCTGTTGTCA+GGG + chr4_3:74100684-74100703 Msa0662170:three_prime_UTR 35.0%
AAGAAACACTAGCAGATTAC+TGG - chr4_3:74100791-74100810 None:intergenic 35.0%
CTCTCTCTCTATACTATTGT+TGG - chr4_3:74100880-74100899 None:intergenic 35.0%
AATAGTATAGAGAGAGAGCA+AGG + chr4_3:74100882-74100901 Msa0662170:three_prime_UTR 35.0%
CAAGGCTTTACACATATCTA+AGG + chr4_3:74100900-74100919 Msa0662170:three_prime_UTR 35.0%
ACCATTTACTACAGCTAAAG+TGG - chr4_3:74100940-74100959 None:intergenic 35.0%
ATTGCAAGTTTCGTCGTGTT+CGG - chr4_3:74093911-74093930 None:intergenic 40.0%
CATGGTCAATAGTTCCGATA+GGG - chr4_3:74094181-74094200 None:intergenic 40.0%
ACATGGTCAATAGTTCCGAT+AGG - chr4_3:74094182-74094201 None:intergenic 40.0%
! GAAAGACCGTTTTATGCACT+CGG + chr4_3:74094597-74094616 Msa0662170:intron 40.0%
! AAAGACCGTTTTATGCACTC+GGG + chr4_3:74094598-74094617 Msa0662170:intron 40.0%
GGTCTTGAGAAAACCTGTAT+AGG + chr4_3:74094676-74094695 Msa0662170:intron 40.0%
!!! TTTGTCATTTTCATCTGGGG+AGG + chr4_3:74094774-74094793 Msa0662170:intron 40.0%
ACTAACCCGCATGTAAAAAC+AGG - chr4_3:74094853-74094872 None:intergenic 40.0%
AGAATACCCATTTATGCACG+TGG + chr4_3:74094873-74094892 Msa0662170:intron 40.0%
GAATACCCATTTATGCACGT+GGG + chr4_3:74094874-74094893 Msa0662170:intron 40.0%
TATGACCCACGTGCATAAAT+GGG - chr4_3:74094882-74094901 None:intergenic 40.0%
TTATGACCCACGTGCATAAA+TGG - chr4_3:74094883-74094902 None:intergenic 40.0%
!! CAAAGGCATCATAACGCATA+GGG - chr4_3:74094985-74095004 None:intergenic 40.0%
GACTGGACAGAAAAAGTTGT+AGG - chr4_3:74095028-74095047 None:intergenic 40.0%
AAGGATGGAACAAACAAGGA+AGG - chr4_3:74095050-74095069 None:intergenic 40.0%
GAAGAAGGATGGAACAAACA+AGG - chr4_3:74095054-74095073 None:intergenic 40.0%
AACAAGCAGAAAGATTCTGG+AGG - chr4_3:74095504-74095523 None:intergenic 40.0%
AACAGTGCAACTAACCCATA+TGG + chr4_3:74095558-74095577 Msa0662170:exon 40.0%
AATGCTCCGTCAAGAAAAGA+TGG + chr4_3:74095706-74095725 Msa0662170:CDS 40.0%
!! GCGCTTTAAGATTGCATAGT+TGG - chr4_3:74095969-74095988 None:intergenic 40.0%
GCTGTTGCTATAGTTACTTG+AGG - chr4_3:74096209-74096228 None:intergenic 40.0%
TCATGCAAAGAATGACCGAA+GGG + chr4_3:74096265-74096284 Msa0662170:CDS 40.0%
AACTTACAAAAGATCAGGGG+AGG - chr4_3:74096330-74096349 None:intergenic 40.0%
!!! GATACATGGTGGATGGTTTT+TGG + chr4_3:74096498-74096517 Msa0662170:intron 40.0%
! TCAAGACACACAAGTTCTAG+GGG - chr4_3:74096629-74096648 None:intergenic 40.0%
CATCAAGACACACAAGTTCT+AGG - chr4_3:74096631-74096650 None:intergenic 40.0%
TGTGTCTTGATGTCTAGAGA+TGG + chr4_3:74096639-74096658 Msa0662170:intron 40.0%
!! GACTATCCTAGATTTGCTGT+TGG + chr4_3:74096759-74096778 Msa0662170:intron 40.0%
! GCCCATATCTCTAGTTGATA+TGG - chr4_3:74096846-74096865 None:intergenic 40.0%
TATGGGCAAAGTAGTCTTTG+AGG + chr4_3:74096859-74096878 Msa0662170:intron 40.0%
AGAAGAACAACAAATCTGGC+AGG - chr4_3:74097164-74097183 None:intergenic 40.0%
!!! ACAGTTTGCATGTTTTTGGC+TGG + chr4_3:74097555-74097574 Msa0662170:CDS 40.0%
!!! TTGCATGTTTTTGGCTGGAA+AGG + chr4_3:74097560-74097579 Msa0662170:CDS 40.0%
ATAACATCCTTAAGAGGACG+AGG - chr4_3:74097597-74097616 None:intergenic 40.0%
TGCACAGAGGATAAAACAGA+AGG + chr4_3:74097659-74097678 Msa0662170:CDS 40.0%
ATTCTATTCGCTTCAAGAGC+AGG + chr4_3:74097845-74097864 Msa0662170:intron 40.0%
CCTAGAAACTGACAAATTGG+AGG - chr4_3:74097875-74097894 None:intergenic 40.0%
CCTCCAATTTGTCAGTTTCT+AGG + chr4_3:74097872-74097891 Msa0662170:intron 40.0%
TTGTGCTCAAACATGGTAGA+TGG + chr4_3:74097922-74097941 Msa0662170:intron 40.0%
TGTGCTCAAACATGGTAGAT+GGG + chr4_3:74097923-74097942 Msa0662170:intron 40.0%
!!! TGAAGGCATTTTGCAGAATG+CGG - chr4_3:74098132-74098151 None:intergenic 40.0%
CATTCTGCAAAATGCCTTCA+TGG + chr4_3:74098132-74098151 Msa0662170:intron 40.0%
!! CTTACAAGCCGGTTTTTGTA+AGG - chr4_3:74098197-74098216 None:intergenic 40.0%
!! CTTACAAAAACCGGCTTGTA+AGG + chr4_3:74098195-74098214 Msa0662170:intron 40.0%
!! TCATTGTGTAGGCTTTGAGA+GGG - chr4_3:74098290-74098309 None:intergenic 40.0%
!! TTCATTGTGTAGGCTTTGAG+AGG - chr4_3:74098291-74098310 None:intergenic 40.0%
TCTCAAAGCCTACACAATGA+AGG + chr4_3:74098290-74098309 Msa0662170:intron 40.0%
TGGAAATTCCGCCTTAATTG+CGG - chr4_3:74098374-74098393 None:intergenic 40.0%
CAAGGATTCAAAAGCTGACA+GGG - chr4_3:74098677-74098696 None:intergenic 40.0%
ACAAGGATTCAAAAGCTGAC+AGG - chr4_3:74098678-74098697 None:intergenic 40.0%
AAAGAGCGGGGTTAAAAACA+AGG - chr4_3:74098695-74098714 None:intergenic 40.0%
TTTGTTCACACACTGGAAAG+TGG + chr4_3:74099021-74099040 Msa0662170:intron 40.0%
AAGCTTCACTTTCAGGAACT+TGG - chr4_3:74099122-74099141 None:intergenic 40.0%
ATGCAAATGAATTGAGGGGA+TGG - chr4_3:74099213-74099232 None:intergenic 40.0%
!!! CACAGACCCACTTTTTCATT+AGG + chr4_3:74099360-74099379 Msa0662170:intron 40.0%
AAAAACAGCAAGGACTCAGA+AGG - chr4_3:74099462-74099481 None:intergenic 40.0%
TCTGCAAGAGAAAAACAGCA+AGG - chr4_3:74099472-74099491 None:intergenic 40.0%
! TGGTTTTCGGTTCTTGAAAC+TGG - chr4_3:74099688-74099707 None:intergenic 40.0%
ACCGAAAACCAAAGCAATGA+TGG + chr4_3:74099697-74099716 Msa0662170:CDS 40.0%
!!! CCCATCATTGCTTTGGTTTT+CGG - chr4_3:74099701-74099720 None:intergenic 40.0%
CCGAAAACCAAAGCAATGAT+GGG + chr4_3:74099698-74099717 Msa0662170:CDS 40.0%
! AATGATGGGAGTGCAGAAAT+GGG + chr4_3:74099712-74099731 Msa0662170:CDS 40.0%
! TACTGATCACAAGATGGACT+CGG + chr4_3:74099744-74099763 Msa0662170:CDS 40.0%
! TTTGTCGGGTAACTTTTCTG+AGG - chr4_3:74099788-74099807 None:intergenic 40.0%
CCCGACAAAGATAAACTTGT+TGG + chr4_3:74099799-74099818 Msa0662170:CDS 40.0%
TAATTCTGTAGCCTCCTTTG+GGG - chr4_3:74099845-74099864 None:intergenic 40.0%
CTAATTCTGTAGCCTCCTTT+GGG - chr4_3:74099846-74099865 None:intergenic 40.0%
GAAAAAAGGAGAAAGGAACG+AGG + chr4_3:74100000-74100019 Msa0662170:CDS 40.0%
AAAAAGGAGAAAGGAACGAG+GGG + chr4_3:74100002-74100021 Msa0662170:CDS 40.0%
ATGAGGATGATCTCATTGAG+AGG + chr4_3:74100052-74100071 Msa0662170:CDS 40.0%
TGAGGATGATCTCATTGAGA+GGG + chr4_3:74100053-74100072 Msa0662170:CDS 40.0%
! AAGCCTGATGATGAAGATCA+TGG + chr4_3:74100288-74100307 Msa0662170:CDS 40.0%
TCACCATGATCTTCATCATC+AGG - chr4_3:74100294-74100313 None:intergenic 40.0%
! TGATGATGAAGATCATGGTG+AGG + chr4_3:74100293-74100312 Msa0662170:CDS 40.0%
GAACAATCGCAAGAGAAAGA+AGG + chr4_3:74100392-74100411 Msa0662170:CDS 40.0%
TCAAGACGTTTCTTCGTTTC+TGG - chr4_3:74100438-74100457 None:intergenic 40.0%
! ATTTTTCCGAGTAAGGGGAT+GGG + chr4_3:74100475-74100494 Msa0662170:exon 40.0%
TAGCTTATGCTTTCTTTGGG+GGG + chr4_3:74100653-74100672 Msa0662170:three_prime_UTR 40.0%
GAGAATTTCATGCTGTTGTC+AGG + chr4_3:74100683-74100702 Msa0662170:three_prime_UTR 40.0%
GAATTTCATGCTGTTGTCAG+GGG + chr4_3:74100685-74100704 Msa0662170:three_prime_UTR 40.0%
AATTTCATGCTGTTGTCAGG+GGG + chr4_3:74100686-74100705 Msa0662170:three_prime_UTR 40.0%
! GCCACTTTAGCTGTAGTAAA+TGG + chr4_3:74100936-74100955 Msa0662170:three_prime_UTR 40.0%
GCAATTGGAAGATGCAGCAA+AGG - chr4_3:74093889-74093908 None:intergenic 45.0%
GACGAAACTTGCAATTCACG+AGG + chr4_3:74093916-74093935 Msa0662170:five_prime_UTR 45.0%
AAACGGAGCAGAGAAGAACA+TGG - chr4_3:74094199-74094218 None:intergenic 45.0%
ATGTTCTTCTCTGCTCCGTT+TGG + chr4_3:74094198-74094217 Msa0662170:intron 45.0%
TGTTCTTCTCTGCTCCGTTT+GGG + chr4_3:74094199-74094218 Msa0662170:intron 45.0%
AGACGAAGTGTGTATGAGCA+TGG + chr4_3:74094410-74094429 Msa0662170:intron 45.0%
GCCCAATCACCACAGTAAAT+CGG + chr4_3:74094534-74094553 Msa0662170:intron 45.0%
! GCCGATTTACTGTGGTGATT+GGG - chr4_3:74094538-74094557 None:intergenic 45.0%
AGAAGACCCATTTATGCTCG+CGG + chr4_3:74094654-74094673 Msa0662170:intron 45.0%
TCTGACCTGCATGCAGAAAA+CGG - chr4_3:74094825-74094844 None:intergenic 45.0%
!! GCAAAGGCATCATAACGCAT+AGG - chr4_3:74094986-74095005 None:intergenic 45.0%
TGGAACAAACAAGGAAGGAC+TGG - chr4_3:74095045-74095064 None:intergenic 45.0%
! GGTTAGTTGCACTGTTGACT+GGG - chr4_3:74095554-74095573 None:intergenic 45.0%
! AGACACAAGTGCTGCCATAT+GGG - chr4_3:74095575-74095594 None:intergenic 45.0%
ATAGTTACTTGAGGCCTGCA+GGG - chr4_3:74096200-74096219 None:intergenic 45.0%
TATAGTTACTTGAGGCCTGC+AGG - chr4_3:74096201-74096220 None:intergenic 45.0%
CTCATGCAAAGAATGACCGA+AGG + chr4_3:74096264-74096283 Msa0662170:CDS 45.0%
! TGAAAGCATAACCCACCCTT+CGG - chr4_3:74096283-74096302 None:intergenic 45.0%
! ATGCTGTGTTGGCAGATACA+TGG + chr4_3:74096484-74096503 Msa0662170:intron 45.0%
TTCAACTGCAGATGCCTGTT+TGG + chr4_3:74096534-74096553 Msa0662170:intron 45.0%
! CTGTCCATGCTCTAGATGTA+CGG + chr4_3:74096791-74096810 Msa0662170:intron 45.0%
! AAGACCGTACATCTAGAGCA+TGG - chr4_3:74096798-74096817 None:intergenic 45.0%
TCTAGATGTACGGTCTTGAG+TGG + chr4_3:74096801-74096820 Msa0662170:intron 45.0%
CTAGATGTACGGTCTTGAGT+GGG + chr4_3:74096802-74096821 Msa0662170:intron 45.0%
!! CAAAGTAGTCTTTGAGGCCT+GGG + chr4_3:74096865-74096884 Msa0662170:intron 45.0%
!! AAAAACCGGCTTGTAAGGTG+AGG + chr4_3:74098200-74098219 Msa0662170:intron 45.0%
! AGCCTACACAATGAAGGTGT+TGG + chr4_3:74098296-74098315 Msa0662170:intron 45.0%
CTCCAACACCTTCATTGTGT+AGG - chr4_3:74098301-74098320 None:intergenic 45.0%
!! CTACACAATGAAGGTGTTGG+AGG + chr4_3:74098299-74098318 Msa0662170:intron 45.0%
ATGTCGCAACTTAGGTGACT+AGG + chr4_3:74098342-74098361 Msa0662170:intron 45.0%
TGTCGCAACTTAGGTGACTA+GGG + chr4_3:74098343-74098362 Msa0662170:intron 45.0%
CAAGGGGCTTATATGGATGT+TGG - chr4_3:74098866-74098885 None:intergenic 45.0%
TTCTTTATGGCCTCGACAAG+GGG - chr4_3:74098882-74098901 None:intergenic 45.0%
CTTCTTTATGGCCTCGACAA+GGG - chr4_3:74098883-74098902 None:intergenic 45.0%
ACTTCTTTATGGCCTCGACA+AGG - chr4_3:74098884-74098903 None:intergenic 45.0%
GTTCCATGCAACTTGTGCAA+GGG - chr4_3:74098925-74098944 None:intergenic 45.0%
AGTTCCATGCAACTTGTGCA+AGG - chr4_3:74098926-74098945 None:intergenic 45.0%
GAACTTGGCAGCAAGGAAAA+TGG - chr4_3:74099107-74099126 None:intergenic 45.0%
AAAGTGAAGCTTCCGTCAGA+CGG + chr4_3:74099130-74099149 Msa0662170:CDS 45.0%
CATTCATAGAGAGACACCGA+AGG - chr4_3:74099428-74099447 None:intergenic 45.0%
GCTTCACTTCCTTGTGATTG+TGG - chr4_3:74099538-74099557 None:intergenic 45.0%
TCACAAGGAAGTGAAGCAGA+AGG + chr4_3:74099541-74099560 Msa0662170:CDS 45.0%
CACAAGGAAGTGAAGCAGAA+GGG + chr4_3:74099542-74099561 Msa0662170:CDS 45.0%
ACAAGGAAGTGAAGCAGAAG+GGG + chr4_3:74099543-74099562 Msa0662170:CDS 45.0%
!! TTTCCACAGATGAGCACTGA+GGG - chr4_3:74099654-74099673 None:intergenic 45.0%
!! TTTTCCACAGATGAGCACTG+AGG - chr4_3:74099655-74099674 None:intergenic 45.0%
! CAATGATGGGAGTGCAGAAA+TGG + chr4_3:74099711-74099730 Msa0662170:CDS 45.0%
!! AGAGAAACTTGTTGCCCCAA+AGG + chr4_3:74099828-74099847 Msa0662170:CDS 45.0%
CCTAATTCTGTAGCCTCCTT+TGG - chr4_3:74099847-74099866 None:intergenic 45.0%
CCAAAGGAGGCTACAGAATT+AGG + chr4_3:74099844-74099863 Msa0662170:CDS 45.0%
AGGAGGCTACAGAATTAGGA+AGG + chr4_3:74099848-74099867 Msa0662170:CDS 45.0%
! TTGGTCAAAATCTGGAGCGT+CGG + chr4_3:74099908-74099927 Msa0662170:CDS 45.0%
ATTGAGAGGGAGCTTGAAGA+TGG + chr4_3:74100066-74100085 Msa0662170:CDS 45.0%
ACGAGGATGATCTCATTGAG+AGG + chr4_3:74100193-74100212 Msa0662170:CDS 45.0%
CGAGGATGATCTCATTGAGA+GGG + chr4_3:74100194-74100213 Msa0662170:CDS 45.0%
ATTGAGAGGGAGCTTGAAGA+TGG + chr4_3:74100066-74100085 Msa0662170:CDS 45.0%
GCTTGAAGATGGAGTAGAGT+TGG + chr4_3:74100218-74100237 Msa0662170:CDS 45.0%
!! TTCGTTTCTGGTTGACTTGC+TGG - chr4_3:74100426-74100445 None:intergenic 45.0%
! GATTTTTCCGAGTAAGGGGA+TGG + chr4_3:74100474-74100493 Msa0662170:exon 45.0%
!!! TAAAATAAAAAACAAATTTT+GGG - chr4_3:74094236-74094255 None:intergenic 5.0%
!!! ATAAAATAAAAAACAAATTT+TGG - chr4_3:74094237-74094256 None:intergenic 5.0%
!!! CTATTTTTTAAATAATTAAT+AGG - chr4_3:74094951-74094970 None:intergenic 5.0%
GTTTCGTCGTGTTCGGCAAT+TGG - chr4_3:74093904-74093923 None:intergenic 50.0%
CTTGCAATTCACGAGGCTTC+AGG + chr4_3:74093923-74093942 Msa0662170:five_prime_UTR 50.0%
GGCTTCTCTTCTCTACCTTC+TGG + chr4_3:74093944-74093963 Msa0662170:five_prime_UTR 50.0%
GGAACTGGGAACATACCAGA+AGG - chr4_3:74093962-74093981 None:intergenic 50.0%
CGAAGTGTGTATGAGCATGG+TGG + chr4_3:74094413-74094432 Msa0662170:intron 50.0%
! GGCCGATTTACTGTGGTGAT+TGG - chr4_3:74094539-74094558 None:intergenic 50.0%
TAAATCGGCCGCAAAGGTGA+TGG + chr4_3:74094549-74094568 Msa0662170:intron 50.0%
CCTGACCCGAGTGCATAAAA+CGG - chr4_3:74094606-74094625 None:intergenic 50.0%
GAAGACCCATTTATGCTCGC+GGG + chr4_3:74094655-74094674 Msa0662170:intron 50.0%
CAAGACCCGCGAGCATAAAT+GGG - chr4_3:74094663-74094682 None:intergenic 50.0%
TCAAGACCCGCGAGCATAAA+TGG - chr4_3:74094664-74094683 None:intergenic 50.0%
! AGAACCCGTTTTCTGCATGC+AGG + chr4_3:74094817-74094836 Msa0662170:intron 50.0%
CTGACCTGCATGCAGAAAAC+GGG - chr4_3:74094824-74094843 None:intergenic 50.0%
GGCATCATAACGCATAGGGA+AGG - chr4_3:74094981-74095000 None:intergenic 50.0%
GTAGGGAACATAGGGTTGCA+GGG - chr4_3:74095010-74095029 None:intergenic 50.0%
TGTAGGGAACATAGGGTTGC+AGG - chr4_3:74095011-74095030 None:intergenic 50.0%
CGAACGAGAGAGAAGAAGGA+TGG - chr4_3:74095065-74095084 None:intergenic 50.0%
GAGACGAACGAGAGAGAAGA+AGG - chr4_3:74095069-74095088 None:intergenic 50.0%
CTCTCTCGTTCGTCTCTGTT+CGG + chr4_3:74095073-74095092 Msa0662170:intron 50.0%
!! GGGTTAGTTGCACTGTTGAC+TGG - chr4_3:74095555-74095574 None:intergenic 50.0%
! CAGACACAAGTGCTGCCATA+TGG - chr4_3:74095576-74095595 None:intergenic 50.0%
CATATGGCAGCACTTGTGTC+TGG + chr4_3:74095574-74095593 Msa0662170:exon 50.0%
TCTGGAGAGTTGCCACATCA+TGG + chr4_3:74095592-74095611 Msa0662170:CDS 50.0%
! CCACATCATGGAGCATCTGA+CGG + chr4_3:74095604-74095623 Msa0662170:CDS 50.0%
!! AAGAAGAAGCATTGGGTCGC+TGG + chr4_3:74095656-74095675 Msa0662170:CDS 50.0%
ATTGTAGCTTCATCCCCTGC+AGG + chr4_3:74096183-74096202 Msa0662170:intron 50.0%
TAGTTACTTGAGGCCTGCAG+GGG - chr4_3:74096199-74096218 None:intergenic 50.0%
TGCAAAGAATGACCGAAGGG+TGG + chr4_3:74096268-74096287 Msa0662170:intron 50.0%
GCAAAGAATGACCGAAGGGT+GGG + chr4_3:74096269-74096288 Msa0662170:intron 50.0%
! CTGTGTTGGCAGATACATGG+TGG + chr4_3:74096487-74096506 Msa0662170:intron 50.0%
! GTTGGCAGATACATGGTGGA+TGG + chr4_3:74096491-74096510 Msa0662170:intron 50.0%
!! GCAAAGTAGTCTTTGAGGCC+TGG + chr4_3:74096864-74096883 Msa0662170:intron 50.0%
TGTGAGTGTGAAGATAGCCC+AGG - chr4_3:74096885-74096904 None:intergenic 50.0%
!!! TCACACCTCGAGCTAGCTTT+TGG + chr4_3:74096900-74096919 Msa0662170:intron 50.0%
!!! CACACCTCGAGCTAGCTTTT+GGG + chr4_3:74096901-74096920 Msa0662170:intron 50.0%
TCAACCCAAAAGCTAGCTCG+AGG - chr4_3:74096908-74096927 None:intergenic 50.0%
AGAGACTCCTCGTCCTCTTA+AGG + chr4_3:74097587-74097606 Msa0662170:CDS 50.0%
TTATCCTCTGTGCAGCAGCA+GGG - chr4_3:74097653-74097672 None:intergenic 50.0%
TTTATCCTCTGTGCAGCAGC+AGG - chr4_3:74097654-74097673 None:intergenic 50.0%
! GGGTGGATTTAGTCCCACAT+CGG - chr4_3:74098270-74098289 None:intergenic 50.0%
!! TTGTGTAGGCTTTGAGAGGG+TGG - chr4_3:74098287-74098306 None:intergenic 50.0%
!! ACAATGAAGGTGTTGGAGGC+TGG + chr4_3:74098303-74098322 Msa0662170:intron 50.0%
GTCGCAACTTAGGTGACTAG+GGG + chr4_3:74098344-74098363 Msa0662170:intron 50.0%
! GAGGGTTGTACTTGCCACTT+TGG + chr4_3:74098824-74098843 Msa0662170:CDS 50.0%
TCCATATAAGCCCCTTGTCG+AGG + chr4_3:74098869-74098888 Msa0662170:CDS 50.0%
CACACTGGAAAGTGGCTTTC+AGG + chr4_3:74099029-74099048 Msa0662170:intron 50.0%
AAGCCACATCATATTGCGGC+AGG + chr4_3:74099079-74099098 Msa0662170:CDS 50.0%
CTTTCAGGAACTTGGCAGCA+AGG - chr4_3:74099114-74099133 None:intergenic 50.0%
CTGACGGAAGCTTCACTTTC+AGG - chr4_3:74099129-74099148 None:intergenic 50.0%
CTACTGTCACATGTCTCGAC+TGG + chr4_3:74099295-74099314 Msa0662170:intron 50.0%
!! TTCCACAGATGAGCACTGAG+GGG - chr4_3:74099653-74099672 None:intergenic 50.0%
CTGCACTCCCATCATTGCTT+TGG - chr4_3:74099708-74099727 None:intergenic 50.0%
! ACAAGATGGACTCGGAAACC+AGG + chr4_3:74099752-74099771 Msa0662170:CDS 50.0%
! CAAGATGGACTCGGAAACCA+GGG + chr4_3:74099753-74099772 Msa0662170:CDS 50.0%
!! TTCTGAGGTCTGAGAATCCC+TGG - chr4_3:74099773-74099792 None:intergenic 50.0%
!! GAAACTTGTTGCCCCAAAGG+AGG + chr4_3:74099831-74099850 Msa0662170:CDS 50.0%
! TGGTCAAAATCTGGAGCGTC+GGG + chr4_3:74099909-74099928 Msa0662170:CDS 50.0%
CTTTGGGTGACTGACCAAGT+GGG - chr4_3:74099939-74099958 None:intergenic 50.0%
TCTTTGGGTGACTGACCAAG+TGG - chr4_3:74099940-74099959 None:intergenic 50.0%
AGATCATGGTGAGGACCTTG+AGG + chr4_3:74100302-74100321 Msa0662170:CDS 50.0%
ATCCTTCCCATCCCCTTACT+CGG - chr4_3:74100484-74100503 None:intergenic 50.0%
! GGAACGGGATGCCTCAATTT+TGG + chr4_3:74100618-74100637 Msa0662170:three_prime_UTR 50.0%
GGAAGATGCAGCAAAGGTCG+AGG - chr4_3:74093883-74093902 None:intergenic 55.0%
! CCTTTGCGGCCGATTTACTG+TGG - chr4_3:74094546-74094565 None:intergenic 55.0%
CCACAGTAAATCGGCCGCAA+AGG + chr4_3:74094543-74094562 Msa0662170:intron 55.0%
! CCGTTTTATGCACTCGGGTC+AGG + chr4_3:74094603-74094622 Msa0662170:intron 55.0%
CATAGGGTTGCAGGGAGCAA+AGG - chr4_3:74095002-74095021 None:intergenic 55.0%
CCGTCAGATGCTCCATGATG+TGG - chr4_3:74095607-74095626 None:intergenic 55.0%
GCACTCCTCACCTTACAAGC+CGG - chr4_3:74098208-74098227 None:intergenic 55.0%
! GGTGTTGGAGGCTGGAATGA+AGG + chr4_3:74098311-74098330 Msa0662170:intron 55.0%
CTAGGGGCGAACCGCAATTA+AGG + chr4_3:74098360-74098379 Msa0662170:intron 55.0%
GCCTCGACAAGGGGCTTATA+TGG - chr4_3:74098873-74098892 None:intergenic 55.0%
ACGCCCTTGCACAAGTTGCA+TGG + chr4_3:74098919-74098938 Msa0662170:CDS 55.0%
GGAAAGTGGCTTTCAGGCTG+AGG + chr4_3:74099035-74099054 Msa0662170:intron 55.0%
GCACCTGCCGCAATATGATG+TGG - chr4_3:74099085-74099104 None:intergenic 55.0%
CAGACCTTCTCACCGTCTGA+CGG - chr4_3:74099145-74099164 None:intergenic 55.0%
TGATGTCACCCCACGCCAAT+TGG + chr4_3:74099177-74099196 Msa0662170:CDS 55.0%
ACCAACCCTCCAATTGGCGT+GGG - chr4_3:74099189-74099208 None:intergenic 55.0%
GATGGCACCAACCCTCCAAT+TGG - chr4_3:74099195-74099214 None:intergenic 55.0%
TCCTGCGATGAGTGAAGAGC+AGG + chr4_3:74099600-74099619 Msa0662170:CDS 55.0%
!! TCCACAGATGAGCACTGAGG+GGG - chr4_3:74099652-74099671 None:intergenic 55.0%
!! CAAAATCTGGAGCGTCGGGA+AGG + chr4_3:74099913-74099932 Msa0662170:CDS 55.0%
TCATGGTGAGGACCTTGAGG+AGG + chr4_3:74100305-74100324 Msa0662170:CDS 55.0%
GACCTTGAGGAGGCTAGAGA+CGG + chr4_3:74100315-74100334 Msa0662170:CDS 55.0%
ACCTTGAGGAGGCTAGAGAC+GGG + chr4_3:74100316-74100335 Msa0662170:CDS 55.0%
TTCCGAGTAAGGGGATGGGA+AGG + chr4_3:74100479-74100498 Msa0662170:exon 55.0%
!! CAGGGGGTGTGCCTCAATTT+TGG + chr4_3:74100702-74100721 Msa0662170:three_prime_UTR 55.0%
CGCGGCGCACATTAGGGTTT+GGG + chr4_3:74094575-74094594 Msa0662170:intron 60.0%
! ATCTGGGGAGGCGCACACTA+GGG + chr4_3:74094786-74094805 Msa0662170:intron 60.0%
! GGAGGCGCACACTAGGGTTT+GGG + chr4_3:74094792-74094811 Msa0662170:intron 60.0%
AAGACCCTGCTGCTGCACAG+AGG + chr4_3:74097646-74097665 Msa0662170:CDS 60.0%
GGGGCGAACCGCAATTAAGG+CGG + chr4_3:74098363-74098382 Msa0662170:intron 60.0%
GCTTCCGTCAGACGGTGAGA+AGG + chr4_3:74099138-74099157 Msa0662170:CDS 60.0%
CGTCAGACGGTGAGAAGGTC+TGG + chr4_3:74099143-74099162 Msa0662170:CDS 60.0%
CAGACGGTGAGAAGGTCTGG+TGG + chr4_3:74099146-74099165 Msa0662170:CDS 60.0%
TGTCACCCCACGCCAATTGG+AGG + chr4_3:74099180-74099199 Msa0662170:CDS 60.0%
GTCACCCCACGCCAATTGGA+GGG + chr4_3:74099181-74099200 Msa0662170:CDS 60.0%
CCAACCCTCCAATTGGCGTG+GGG - chr4_3:74099188-74099207 None:intergenic 60.0%
CACCAACCCTCCAATTGGCG+TGG - chr4_3:74099190-74099209 None:intergenic 60.0%
AAGCAGAAGGGGCTGCTGCA+GGG + chr4_3:74099554-74099573 Msa0662170:CDS 60.0%
GCCTGCTCTTCACTCATCGC+AGG - chr4_3:74099604-74099623 None:intergenic 60.0%
ACCCCCTCAGTGCTCATCTG+TGG + chr4_3:74099648-74099667 Msa0662170:CDS 60.0%
CCTTGAGGAGGCTAGAGACG+GGG + chr4_3:74100317-74100336 Msa0662170:CDS 60.0%
CCGCGCAGCCATCACCTTTG+CGG - chr4_3:74094560-74094579 None:intergenic 65.0%
! CCGCAAAGGTGATGGCTGCG+CGG + chr4_3:74094557-74094576 Msa0662170:intron 65.0%
ATGGCTGCGCGGCGCACATT+AGG + chr4_3:74094568-74094587 Msa0662170:intron 65.0%
TGGCTGCGCGGCGCACATTA+GGG + chr4_3:74094569-74094588 Msa0662170:intron 65.0%
GCGCGGCGCACATTAGGGTT+TGG + chr4_3:74094574-74094593 Msa0662170:intron 65.0%
! CATCTGGGGAGGCGCACACT+AGG + chr4_3:74094785-74094804 Msa0662170:intron 65.0%
! GGGAGGCGCACACTAGGGTT+TGG + chr4_3:74094791-74094810 Msa0662170:intron 65.0%
CGGTGAGAAGGTCTGGTGGC+AGG + chr4_3:74099150-74099169 Msa0662170:CDS 65.0%
CCCCACGCCAATTGGAGGGT+TGG + chr4_3:74099185-74099204 Msa0662170:intron 65.0%
GAAGCAGAAGGGGCTGCTGC+AGG + chr4_3:74099553-74099572 Msa0662170:CDS 65.0%
AGCAGAAGGGGCTGCTGCAG+GGG + chr4_3:74099555-74099574 Msa0662170:CDS 65.0%
GGGAGCGAGAGCTGCTGCAA+GGG + chr4_3:74099576-74099595 Msa0662170:CDS 65.0%
GGAGCGAGAGCTGCTGCAAG+GGG + chr4_3:74099577-74099596 Msa0662170:CDS 65.0%
CCCCGTCTCTAGCCTCCTCA+AGG - chr4_3:74100320-74100339 None:intergenic 65.0%
GAGGAGGCTAGAGACGGGGA+TGG + chr4_3:74100321-74100340 Msa0662170:CDS 65.0%
GCAGAAGGGGCTGCTGCAGG+GGG + chr4_3:74099556-74099575 Msa0662170:CDS 70.0%
GGGGAGCGAGAGCTGCTGCA+AGG + chr4_3:74099575-74099594 Msa0662170:CDS 70.0%
!! GAGCGTCGGGAAGGCCCACT+TGG + chr4_3:74099922-74099941 Msa0662170:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 74093797 74100964 74093797 ID=Msa0662170;Name=Msa0662170
chr4_3 mRNA 74093797 74100964 74093797 ID=Msa0662170-mRNA-1;Parent=Msa0662170;Name=Msa0662170-mRNA-1;_AED=0.05;_eAED=0.05;_QI=238|1|1|1|0.83|0.71|7|476|590
chr4_3 exon 74093797 74093965 74093797 ID=Msa0662170-mRNA-1:exon:22324;Parent=Msa0662170-mRNA-1
chr4_3 exon 74095508 74095806 74095508 ID=Msa0662170-mRNA-1:exon:22325;Parent=Msa0662170-mRNA-1
chr4_3 exon 74096205 74096286 74096205 ID=Msa0662170-mRNA-1:exon:22326;Parent=Msa0662170-mRNA-1
chr4_3 exon 74097546 74097680 74097546 ID=Msa0662170-mRNA-1:exon:22327;Parent=Msa0662170-mRNA-1
chr4_3 exon 74098783 74098958 74098783 ID=Msa0662170-mRNA-1:exon:22328;Parent=Msa0662170-mRNA-1
chr4_3 exon 74099051 74099202 74099051 ID=Msa0662170-mRNA-1:exon:22329;Parent=Msa0662170-mRNA-1
chr4_3 exon 74099491 74100964 74099491 ID=Msa0662170-mRNA-1:exon:22330;Parent=Msa0662170-mRNA-1
chr4_3 five_prime_UTR 74093797 74093965 74093797 ID=Msa0662170-mRNA-1:five_prime_utr;Parent=Msa0662170-mRNA-1
chr4_3 five_prime_UTR 74095508 74095576 74095508 ID=Msa0662170-mRNA-1:five_prime_utr;Parent=Msa0662170-mRNA-1
chr4_3 CDS 74095577 74095806 74095577 ID=Msa0662170-mRNA-1:cds;Parent=Msa0662170-mRNA-1
chr4_3 CDS 74096205 74096286 74096205 ID=Msa0662170-mRNA-1:cds;Parent=Msa0662170-mRNA-1
chr4_3 CDS 74097546 74097680 74097546 ID=Msa0662170-mRNA-1:cds;Parent=Msa0662170-mRNA-1
chr4_3 CDS 74098783 74098958 74098783 ID=Msa0662170-mRNA-1:cds;Parent=Msa0662170-mRNA-1
chr4_3 CDS 74099051 74099202 74099051 ID=Msa0662170-mRNA-1:cds;Parent=Msa0662170-mRNA-1
chr4_3 CDS 74099491 74100488 74099491 ID=Msa0662170-mRNA-1:cds;Parent=Msa0662170-mRNA-1
chr4_3 three_prime_UTR 74100489 74100964 74100489 ID=Msa0662170-mRNA-1:three_prime_utr;Parent=Msa0662170-mRNA-1
Gene Sequence

>Msa0662170

ATGGCAGCACTTGTGTCTGGAGAGTTGCCACATCATGGAGCATCTGACGGAAGCTCTTGTAGAAGTTCTCAAGATAAGCAAGAAGAAGCATTGGGTCGCTGGTATATGTCTAGAAAAGAAATAGAAGAAAATGCTCCGTCAAGAAAAGATGGAATTGACTTGAAGAAAGAGACATATCTGCGCAAGTCATACTGTACATTCTTACAAGATTTAGGCATGCGACTTAAAGTGCCTCAAGTAACTATAGCAACAGCCATAATATTTTGTCATCGATTCTTTCTTCGACAATCTCATGCAAAGAATGACCGAAGGACAATTGCTACAGTTTGCATGTTTTTGGCTGGAAAGGTTGAAGAGACTCCTCGTCCTCTTAAGGATGTTATTCTCATATCTTATGAGATGATTCACAAGAAAGACCCTGCTGCTGCACAGAGGATAAAACAGAAGGAAGTATATGAGCAGCAGAAAGAATTAATTTTACTTGGAGAGAGGGTTGTACTTGCCACTTTGGCTTTTGACTTGAATGTCCAACATCCATATAAGCCCCTTGTCGAGGCCATAAAGAAGTTCAATGTTGCTAAGAACGCCCTTGCACAAGTTGCATGGAACTTTGTTAATGATGGGCTGAGGACATCACTCTGCCTACAATTTAAGCCACATCATATTGCGGCAGGTGCCATTTTCCTTGCTGCCAAGTTCCTGAAAGTGAAGCTTCCGTCAGACGGTGAGAAGGTCTGGTGGCAGGAGTTTGATGTCACCCCACGCCAATTGGAGGAAGTTAGCAATCAAATGTTGGAACTTTATGAGCAGAATAGAATTCCACAATCACAAGGAAGTGAAGCAGAAGGGGCTGCTGCAGGGGGAGCGAGAGCTGCTGCAAGGGGTCCTGCGATGAGTGAAGAGCAGGCTTCAAAACAAATTTCATCTCATTCACCCCCTCAGTGCTCATCTGTGGAAAATAATGCAGTACCAGTTTCAAGAACCGAAAACCAAAGCAATGATGGGAGTGCAGAAATGGGAAGTGACATTACTGATCACAAGATGGACTCGGAAACCAGGGATTCTCAGACCTCAGAAAAGTTACCCGACAAAGATAAACTTGTTGGAGATCAAGAGAAACTTGTTGCCCCAAAGGAGGCTACAGAATTAGGAAGGAGTGATGATACATCATTAAACAAGTCTAGCTTCAATGTTGGTCAAAATCTGGAGCGTCGGGAAGGCCCACTTGGTCAGTCACCCAAAGAAGCAATCAAGATTGACAAAGATAAGGTAAAGGCCATATTAGAAAAAAGGAGAAAGGAACGAGGGGAAATGACGATAAAGAAAGATGTAATGGATGAGGATGATCTCATTGAGAGGGAGCTTGAAGATGGAGTTGAAATGACCAACAAGATGATTGACAAAGACAAAGTAAAGACCGCGTTAGAAAAAATGAGAAAGGAACGAGGTGAAATGACATTAAAGAAAGATGTAATGGACGAGGATGATCTCATTGAGAGGGAGCTTGAAGATGGAGTAGAGTTGGCAGTTGAGAATGAGAAAAATAAGCAACAGAGAAGACAGAGCTTGTCTAAGCCTGATGATGAAGATCATGGTGAGGACCTTGAGGAGGCTAGAGACGGGGATGGATTCAATGCAGAAAAAGGGGATATGATAGATGATGCTTCATCTTTGTTGAACAATCGCAAGAGAAAGAAGGGTAGCTCTCCAGCAAGTCAACCAGAAACGAAGAAACGTCTTGATTCCAATTATCACAATGATTTTTCCGAGTAA
Protein sequence

>Msa0662170

MAALVSGELPHHGASDGSSCRSSQDKQEEALGRWYMSRKEIEENAPSRKDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILISYEMIHKKDPAAAQRIKQKEVYEQQKELILLGERVVLATLAFDLNVQHPYKPLVEAIKKFNVAKNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRIPQSQGSEAEGAAAGGARAAARGPAMSEEQASKQISSHSPPQCSSVENNAVPVSRTENQSNDGSAEMGSDITDHKMDSETRDSQTSEKLPDKDKLVGDQEKLVAPKEATELGRSDDTSLNKSSFNVGQNLERREGPLGQSPKEAIKIDKDKVKAILEKRRKERGEMTIKKDVMDEDDLIERELEDGVEMTNKMIDKDKVKTALEKMRKERGEMTLKKDVMDEDDLIERELEDGVELAVENEKNKQQRRQSLSKPDDEDHGEDLEEARDGDGFNAEKGDMIDDASSLLNNRKRKKGSSPASQPETKKRLDSNYHNDFSE*