Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0812060 | RHN56857.1 | 99.565 | 460 | 2 | 0 | 1 | 460 | 1 | 460 | 0.0 | 932 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0812060 | sp|Q8RWB1|SRL1_ARATH | 72.569 | 288 | 47 | 5 | 2 | 287 | 3 | 260 | 8.97e-144 | 419 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0812060 | A0A396I1Y9 | 99.565 | 460 | 2 | 0 | 1 | 460 | 1 | 460 | 0.0 | 932 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010770 | Msa0812060 | 0.800838 | 1.194231e-48 | -8.615850e-47 |
| Msa0036370 | Msa0812060 | 0.821359 | 4.211504e-53 | -8.615850e-47 |
| Msa0065650 | Msa0812060 | 0.833050 | 6.662628e-56 | -8.615850e-47 |
| Msa0090030 | Msa0812060 | 0.832005 | 1.209882e-55 | -8.615850e-47 |
| Msa0610500 | Msa0812060 | 0.829697 | 4.451504e-55 | -8.615850e-47 |
| Msa0620330 | Msa0812060 | 0.800835 | 1.196355e-48 | -8.615850e-47 |
| Msa0651150 | Msa0812060 | 0.835962 | 1.236223e-56 | -8.615850e-47 |
| Msa0679550 | Msa0812060 | 0.811617 | 6.401774e-51 | -8.615850e-47 |
| Msa0687230 | Msa0812060 | 0.812991 | 3.208739e-51 | -8.615850e-47 |
| Msa0706390 | Msa0812060 | 0.809656 | 1.699003e-50 | -8.615850e-47 |
| Msa0713350 | Msa0812060 | 0.808977 | 2.375673e-50 | -8.615850e-47 |
| Msa0721340 | Msa0812060 | 0.803736 | 3.023090e-49 | -8.615850e-47 |
| Msa0736570 | Msa0812060 | 0.916395 | 1.876276e-85 | -8.615850e-47 |
| Msa0754920 | Msa0812060 | 0.820912 | 5.339041e-53 | -8.615850e-47 |
| Msa0756930 | Msa0812060 | 0.827063 | 1.924222e-54 | -8.615850e-47 |
| Msa0774750 | Msa0812060 | 0.846380 | 2.253221e-59 | -8.615850e-47 |
| Msa0781710 | Msa0812060 | 0.832596 | 8.640127e-56 | -8.615850e-47 |
| Msa0812060 | Msa0812290 | 0.826945 | 2.053518e-54 | -8.615850e-47 |
| Msa0812060 | Msa0820530 | -0.817343 | 3.463202e-52 | -8.615850e-47 |
| Msa0812060 | Msa0823500 | 0.812512 | 4.084134e-51 | -8.615850e-47 |
| Msa0812060 | Msa0862500 | 0.813910 | 2.014775e-51 | -8.615850e-47 |
| Msa0812060 | Msa0877710 | 0.825900 | 3.641975e-54 | -8.615850e-47 |
| Msa0812060 | Msa0965020 | 0.814987 | 1.164184e-51 | -8.615850e-47 |
| Msa0812060 | Msa1036740 | 0.825456 | 4.642616e-54 | -8.615850e-47 |
| Msa0812060 | Msa1036910 | 0.813866 | 2.060356e-51 | -8.615850e-47 |
| Msa0812060 | Msa1105190 | 0.800356 | 1.497501e-48 | -8.615850e-47 |
| Msa0812060 | Msa1127430 | 0.812375 | 4.376185e-51 | -8.615850e-47 |
| Msa0812060 | Msa1130530 | 0.828903 | 6.940782e-55 | -8.615850e-47 |
| Msa0812060 | Msa1163870 | 0.839922 | 1.185896e-57 | -8.615850e-47 |
| Msa0812060 | Msa1164020 | 0.821371 | 4.183415e-53 | -8.615850e-47 |
| Msa0812060 | Msa1174310 | 0.816098 | 6.588395e-52 | -8.615850e-47 |
| Msa0812060 | Msa1176980 | 0.831567 | 1.551934e-55 | -8.615850e-47 |
| Msa0812060 | Msa1178370 | 0.801142 | 1.035288e-48 | -8.615850e-47 |
| Msa0812060 | Msa1199710 | 0.800682 | 1.285172e-48 | -8.615850e-47 |
| Msa0812060 | Msa1314770 | 0.809721 | 1.644815e-50 | -8.615850e-47 |
| Msa0812060 | Msa1336040 | 0.827189 | 1.795194e-54 | -8.615850e-47 |
| Msa0812060 | Msa1340830 | 0.836582 | 8.601696e-57 | -8.615850e-47 |
| Msa0812060 | Msa1341490 | 0.816269 | 6.032509e-52 | -8.615850e-47 |
| Msa0812060 | Msa1363700 | 0.813730 | 2.207526e-51 | -8.615850e-47 |
| Msa0812060 | Msa1383350 | 0.821828 | 3.280022e-53 | -8.615850e-47 |
| Msa0812060 | Msa1396940 | 0.817331 | 3.486561e-52 | -8.615850e-47 |
| Msa0812060 | Msa1401420 | 0.804798 | 1.817013e-49 | -8.615850e-47 |
| Msa0812060 | Msa1407970 | 0.800763 | 1.237412e-48 | -8.615850e-47 |
| Msa0812060 | Msa1422840 | 0.806718 | 7.177780e-50 | -8.615850e-47 |
| Msa0812060 | Msa1426570 | 0.821637 | 3.632072e-53 | -8.615850e-47 |
| Msa0812060 | Msa1426920 | 0.826745 | 2.291448e-54 | -8.615850e-47 |
| Msa0138210 | Msa0812060 | 0.800528 | 1.381313e-48 | -8.615850e-47 |
| Msa0175050 | Msa0812060 | 0.811823 | 5.773803e-51 | -8.615850e-47 |
| Msa0183870 | Msa0812060 | 0.801125 | 1.043302e-48 | -8.615850e-47 |
| Msa0202930 | Msa0812060 | 0.801387 | 9.221353e-49 | -8.615850e-47 |
| Msa0381700 | Msa0812060 | 0.806790 | 6.930621e-50 | -8.615850e-47 |
| Msa0387910 | Msa0812060 | 0.802505 | 5.435672e-49 | -8.615850e-47 |
| Msa0419520 | Msa0812060 | 0.807924 | 3.985231e-50 | -8.615850e-47 |
| Msa0436190 | Msa0812060 | 0.813382 | 2.632496e-51 | -8.615850e-47 |
| Msa0439890 | Msa0812060 | 0.823789 | 1.146153e-53 | -8.615850e-47 |
| Msa0462540 | Msa0812060 | 0.805634 | 1.214267e-49 | -8.615850e-47 |
| Msa0247060 | Msa0812060 | 0.817632 | 2.981962e-52 | -8.615850e-47 |
| Msa0314060 | Msa0812060 | 0.809554 | 1.786943e-50 | -8.615850e-47 |
| Msa0324240 | Msa0812060 | 0.802360 | 5.822323e-49 | -8.615850e-47 |
| Msa0335320 | Msa0812060 | -0.811731 | 6.044905e-51 | -8.615850e-47 |
| Msa0514610 | Msa0812060 | 0.800846 | 1.189996e-48 | -8.615850e-47 |
| Msa0524600 | Msa0812060 | 0.815432 | 9.274801e-52 | -8.615850e-47 |
| Msa0537770 | Msa0812060 | 0.804288 | 2.320877e-49 | -8.615850e-47 |
| Msa0546570 | Msa0812060 | 0.805262 | 1.453533e-49 | -8.615850e-47 |
| Msa0550540 | Msa0812060 | 0.809743 | 1.627473e-50 | -8.615850e-47 |
| Msa0550570 | Msa0812060 | 0.815260 | 1.012685e-51 | -8.615850e-47 |
| Msa0555640 | Msa0812060 | 0.825598 | 4.295221e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0812060 | MtrunA17_Chr5g0434011 | 99.565 | 460 | 2 | 0 | 1 | 460 | 1 | 460 | 0.0 | 932 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0812060 | AT5G37370.1 | 72.569 | 288 | 47 | 5 | 2 | 287 | 3 | 260 | 9.12e-145 | 419 |
| Msa0812060 | AT5G37370.2 | 70.486 | 288 | 45 | 5 | 2 | 287 | 3 | 252 | 8.48e-139 | 404 |
| Msa0812060 | AT5G37370.4 | 69.362 | 235 | 40 | 5 | 55 | 287 | 1 | 205 | 1.54e-107 | 322 |
| Msa0812060 | AT5G37370.8 | 89.583 | 96 | 10 | 0 | 2 | 97 | 3 | 98 | 2.95e-59 | 190 |
| Msa0812060 | AT5G37370.11 | 89.583 | 96 | 10 | 0 | 2 | 97 | 3 | 98 | 2.95e-59 | 190 |
| Msa0812060 | AT5G37370.3 | 88.542 | 96 | 11 | 0 | 2 | 97 | 3 | 98 | 4.25e-59 | 189 |
| Msa0812060 | AT5G37370.12 | 88.542 | 96 | 11 | 0 | 2 | 97 | 3 | 98 | 4.25e-59 | 189 |
| Msa0812060 | AT5G37370.10 | 89.474 | 95 | 10 | 0 | 2 | 96 | 3 | 97 | 4.64e-58 | 186 |
| Msa0812060 | AT5G37370.9 | 89.474 | 95 | 10 | 0 | 2 | 96 | 3 | 97 | 4.64e-58 | 186 |
| Msa0812060 | AT5G37370.6 | 59.236 | 157 | 32 | 5 | 133 | 287 | 1 | 127 | 3.32e-48 | 166 |
| Msa0812060 | AT5G37370.7 | 59.236 | 157 | 32 | 5 | 133 | 287 | 1 | 127 | 3.32e-48 | 166 |
| Msa0812060 | AT5G37370.5 | 59.236 | 157 | 32 | 5 | 133 | 287 | 1 | 127 | 3.32e-48 | 166 |
Find 171 sgRNAs with CRISPR-Local
Find 478 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTCATCATCACATATTT+TGG | 0.108318 | 5_3:-41883840 | Msa0812060:CDS |
| ATGTATACTAAATTTATTTC+TGG | 0.164634 | 5_3:-41881375 | Msa0812060:three_prime_UTR |
| AACCAATCTCTTCGTGTAAT+TGG | 0.206631 | 5_3:-41887897 | Msa0812060:intron |
| AAAGATTTGTACGGTGATTT+AGG | 0.215552 | 5_3:-41881640 | Msa0812060:CDS |
| TCCCTGTCCCTATCCCTTTC+AGG | 0.221156 | 5_3:+41882060 | None:intergenic |
| GCTGCCCTTTCAGTCTCTTT+TGG | 0.266936 | 5_3:-41882219 | Msa0812060:CDS |
| TCACCACTATTATCCCTTCT+AGG | 0.271633 | 5_3:+41881583 | None:intergenic |
| TTAGACTTGGTGGCTCTTCT+TGG | 0.285751 | 5_3:-41881552 | Msa0812060:CDS |
| AACCAGCTCCACAGAGTCTT+TGG | 0.285766 | 5_3:+41885069 | None:intergenic |
| CACGTTCCCTATCCCTTTCT+CGG | 0.292416 | 5_3:+41882013 | None:intergenic |
| CTTGTGATGCACCTGGATTC+TGG | 0.297506 | 5_3:+41883881 | None:intergenic |
| GCTCTGACTGCGATGATTGC+TGG | 0.309396 | 5_3:+41882092 | None:intergenic |
| ACTTGGTTGACATAAGTTAT+AGG | 0.309738 | 5_3:-41881434 | Msa0812060:three_prime_UTR |
| ACCTGACGCATTACAGGAAC+TGG | 0.327476 | 5_3:+41882351 | None:intergenic |
| GCCACAACCTGACGCATTAC+AGG | 0.330998 | 5_3:+41882345 | None:intergenic |
| GCGTCAGGTTGTGGCAAATC+TGG | 0.336533 | 5_3:-41882337 | Msa0812060:CDS |
| TTCTAATGTTGAATACCTTT+AGG | 0.346432 | 5_3:-41881238 | Msa0812060:three_prime_UTR |
| AAAGGGATAGGGAACGTGAT+AGG | 0.370047 | 5_3:-41882008 | Msa0812060:CDS |
| AGAGAAGTTATGATTATGAT+AGG | 0.373861 | 5_3:-41881873 | Msa0812060:CDS |
| GCTCTTATGTAAGGAGAATC+AGG | 0.377200 | 5_3:+41886503 | None:intergenic |
| ACAGGGAGCGGTCACGCTCC+AGG | 0.378200 | 5_3:-41882044 | Msa0812060:CDS |
| CCTTTCTCGGTCCCTGTCCC+TGG | 0.381415 | 5_3:+41882026 | None:intergenic |
| CATGGCGTGCGGTGCCAACT+TGG | 0.388924 | 5_3:+41881731 | None:intergenic |
| AGCGGTCACGCTCCAGGGAC+AGG | 0.394319 | 5_3:-41882038 | Msa0812060:CDS |
| TATATCCGTGATTTGCTCCT+TGG | 0.397027 | 5_3:-41884135 | Msa0812060:CDS |
| ACCGAGATGCTGAAAGATAC+AGG | 0.397891 | 5_3:-41881954 | Msa0812060:CDS |
| ATATCTCATCAATAACTTCA+TGG | 0.399120 | 5_3:+41886657 | None:intergenic |
| CTCTCGGTCCCTATCCCTCC+TGG | 0.402821 | 5_3:+41881894 | None:intergenic |
| CTGCTTGACAGTGAGCTTCA+TGG | 0.403160 | 5_3:+41886547 | None:intergenic |
| CTCGGTCCTTGTTCCTATCT+CGG | 0.405225 | 5_3:+41881971 | None:intergenic |
| CATTGCCTTTCATTATCACT+TGG | 0.408079 | 5_3:-41881451 | Msa0812060:three_prime_UTR |
| GGGACAGATCCAGGAGGGAT+AGG | 0.413562 | 5_3:-41881903 | Msa0812060:CDS |
| ATCATGGAGATACAGACTTC+TGG | 0.414622 | 5_3:-41886770 | Msa0812060:CDS |
| TCCTGTAATGCGTCAGGTTG+TGG | 0.416923 | 5_3:-41882346 | Msa0812060:CDS |
| CCAGGGACAGGGACCGAGAA+AGG | 0.423524 | 5_3:-41882026 | Msa0812060:CDS |
| AAGTCTAAAACTTGCAAAGC+AGG | 0.424980 | 5_3:+41881340 | None:intergenic |
| CCGTGATTTGCTCCTTGGAC+AGG | 0.429155 | 5_3:-41884130 | Msa0812060:intron |
| TTCTTCACCCATTCGTCGTA+CGG | 0.437084 | 5_3:-41882163 | Msa0812060:CDS |
| CTCTGACTGCGATGATTGCT+GGG | 0.437763 | 5_3:+41882093 | None:intergenic |
| ACAGGGACCGAGAAAGGGAT+AGG | 0.439373 | 5_3:-41882020 | Msa0812060:CDS |
| TTCTCTAGCAAGGACTCAAT+TGG | 0.441660 | 5_3:+41886743 | None:intergenic |
| CCCTGTATCTTTCAGCATCT+CGG | 0.447442 | 5_3:+41881953 | None:intergenic |
| ACAGGGATCGGGACCGGGAT+AGG | 0.448801 | 5_3:-41881936 | Msa0812060:CDS |
| ACCTCATCATCCTTTGCATA+TGG | 0.450018 | 5_3:+41885042 | None:intergenic |
| ACATGGAAAGAATTCCTAGA+AGG | 0.450119 | 5_3:-41881597 | Msa0812060:CDS |
| ATCCAAAGACTCTGTGGAGC+TGG | 0.453230 | 5_3:-41885071 | Msa0812060:CDS |
| CCCAGTTCCTGTAATGCGTC+AGG | 0.457842 | 5_3:-41882352 | Msa0812060:CDS |
| GCTGTCTAGATGCAAATTGA+TGG | 0.467171 | 5_3:-41881149 | Msa0812060:three_prime_UTR |
| TACCAATTACACGAAGAGAT+TGG | 0.478209 | 5_3:+41887895 | None:intergenic |
| TGCCAACTTGGCTCTGACTT+CGG | 0.478380 | 5_3:+41881743 | None:intergenic |
| TTTAAAGCTAAAACTCCTAA+AGG | 0.479611 | 5_3:+41881223 | None:intergenic |
| GTGAATATCCTGAAAGGGAT+AGG | 0.479720 | 5_3:-41882068 | Msa0812060:CDS |
| AAAGATACAGGGATCGGGAC+CGG | 0.479933 | 5_3:-41881942 | Msa0812060:CDS |
| AGAAGACAGAAAGCAGTTGA+AGG | 0.479991 | 5_3:+41886584 | None:intergenic |
| CGCCACATCGAGCCTCTACA+AGG | 0.483631 | 5_3:-41882188 | Msa0812060:CDS |
| CTACATACCGCTCTTATGTA+AGG | 0.483855 | 5_3:+41886494 | None:intergenic |
| ACAGCATTGGCAATGGTAGT+AGG | 0.483968 | 5_3:-41881807 | Msa0812060:CDS |
| ACTATGAGAGGGACAGATCC+AGG | 0.484456 | 5_3:-41881912 | Msa0812060:CDS |
| ACAGATATTATGACCGAGAT+AGG | 0.486094 | 5_3:-41881984 | Msa0812060:CDS |
| ATCCTGAAAGGGATAGGGAC+AGG | 0.486555 | 5_3:-41882062 | Msa0812060:CDS |
| GTTTGGGTAATCGAAAAGAA+TGG | 0.488048 | 5_3:+41888066 | None:intergenic |
| GGACAGATCCAGGAGGGATA+GGG | 0.488374 | 5_3:-41881902 | Msa0812060:CDS |
| TCTAGGAATTCTTTCCATGT+TGG | 0.493850 | 5_3:+41881600 | None:intergenic |
| GGTGAAGAGGTTATTAGACT+TGG | 0.496955 | 5_3:-41881565 | Msa0812060:CDS |
| TATCCCTTTCAGGATATTCA+CGG | 0.497547 | 5_3:+41882070 | None:intergenic |
| TTGCATTCTTGTGATGCACC+TGG | 0.498317 | 5_3:+41883874 | None:intergenic |
| ACGACATCAGATTATTGACT+TGG | 0.498873 | 5_3:+41881200 | None:intergenic |
| GTCGTACCACAATGTGTAGT+AGG | 0.500096 | 5_3:+41882300 | None:intergenic |
| CATGTGGAACCATGGATGAC+GGG | 0.500480 | 5_3:-41886620 | Msa0812060:CDS |
| GATAATGAAAGGCAATGAAA+AGG | 0.500868 | 5_3:+41881457 | None:intergenic |
| CAGGGATCGGGACCGGGATA+GGG | 0.504741 | 5_3:-41881935 | Msa0812060:CDS |
| CTCACTGTCAAGCAGATGCA+TGG | 0.508388 | 5_3:-41886539 | Msa0812060:CDS |
| GCAGGTACCGTACGACGAAT+GGG | 0.512160 | 5_3:+41882156 | None:intergenic |
| AGCAGGTACCGTACGACGAA+TGG | 0.515431 | 5_3:+41882155 | None:intergenic |
| GAAGAGGTTATTAGACTTGG+TGG | 0.517064 | 5_3:-41881562 | Msa0812060:CDS |
| TGCTGAAAGATACAGGGATC+GGG | 0.517734 | 5_3:-41881947 | Msa0812060:CDS |
| AAGGGATAGGGAACGTGATA+GGG | 0.519008 | 5_3:-41882007 | Msa0812060:CDS |
| ACGCAGAGAGAGAAAGTAGC+CGG | 0.520155 | 5_3:-41881840 | Msa0812060:CDS |
| AAGATACAGGGATCGGGACC+GGG | 0.522026 | 5_3:-41881941 | Msa0812060:CDS |
| GTCATCCGTCCATTAGATCC+AGG | 0.523423 | 5_3:+41884171 | None:intergenic |
| CGCTCTAGTCCACAGAGAGA+TGG | 0.529001 | 5_3:-41881703 | Msa0812060:CDS |
| TTTCACAGAAGGTGGTCTGC+GGG | 0.532271 | 5_3:+41882242 | None:intergenic |
| CGACAGTTCCCCGTCATCCA+TGG | 0.535024 | 5_3:+41886611 | None:intergenic |
| AGCCGAAGTCAGAGCCAAGT+TGG | 0.536221 | 5_3:-41881745 | Msa0812060:CDS |
| ACTACACATTGTGGTACGAC+AGG | 0.536972 | 5_3:-41882297 | Msa0812060:CDS |
| AAAGGGATAGGGACAGGGAG+CGG | 0.538983 | 5_3:-41882056 | Msa0812060:CDS |
| AGTGTCATCAGAACCGTGAC+GGG | 0.541768 | 5_3:+41882266 | None:intergenic |
| CCCTCTCATAGTCCCTATCC+CGG | 0.545144 | 5_3:+41881923 | None:intergenic |
| CATAATCATAACTTCTCTCT+CGG | 0.545819 | 5_3:+41881878 | None:intergenic |
| CAGGGAGCGGTCACGCTCCA+GGG | 0.545850 | 5_3:-41882043 | Msa0812060:CDS |
| GTCAACCAAGTGATAATGAA+AGG | 0.549160 | 5_3:+41881446 | None:intergenic |
| CGCAGAGAGAGAAAGTAGCC+GGG | 0.549213 | 5_3:-41881839 | Msa0812060:CDS |
| AAGGGATAATAGTGGTGAAG+AGG | 0.549270 | 5_3:-41881578 | Msa0812060:CDS |
| CAGGGACAGGGACCGAGAAA+GGG | 0.551544 | 5_3:-41882025 | Msa0812060:CDS |
| CAGGGACCGAGAAAGGGATA+GGG | 0.551648 | 5_3:-41882019 | Msa0812060:CDS |
| TGACAAAATTGTGTAACTGT+TGG | 0.551754 | 5_3:-41886823 | Msa0812060:five_prime_UTR |
| TGTGTAACTGTTGGAGTGAG+AGG | 0.551897 | 5_3:-41886814 | Msa0812060:five_prime_UTR |
| CTCCAAAATATGTGATGATG+AGG | 0.552372 | 5_3:+41883838 | None:intergenic |
| GAAGTTATGATTATGATAGG+AGG | 0.553854 | 5_3:-41881870 | Msa0812060:CDS |
| GAGCTCTACTACCAGAATCC+AGG | 0.555398 | 5_3:-41883892 | Msa0812060:CDS |
| GTCGGAGTAGAAGTAGGAGC+AGG | 0.556706 | 5_3:-41881768 | Msa0812060:CDS |
| GCGGTCACGCTCCAGGGACA+GGG | 0.556793 | 5_3:-41882037 | Msa0812060:CDS |
| AGAATGCTTGTATCTGATGC+CGG | 0.559156 | 5_3:-41881510 | Msa0812060:three_prime_UTR |
| CGGGATTATGACAACAGCAT+TGG | 0.559737 | 5_3:-41881820 | Msa0812060:CDS |
| GAGCCGTGAATATCCTGAAA+GGG | 0.564193 | 5_3:-41882073 | Msa0812060:CDS |
| GCTAAACTTAAAGATTTGTA+CGG | 0.567299 | 5_3:-41881649 | Msa0812060:CDS |
| CAATGCTGTTGTCATAATCC+CGG | 0.569029 | 5_3:+41881821 | None:intergenic |
| CATGGAAAGAATTCCTAGAA+GGG | 0.569552 | 5_3:-41881596 | Msa0812060:CDS |
| GCTGACCAAAAGAGACTGAA+AGG | 0.571040 | 5_3:+41882214 | None:intergenic |
| CTTTCACAGAAGGTGGTCTG+CGG | 0.572682 | 5_3:+41882241 | None:intergenic |
| TGAATATCCTGAAAGGGATA+GGG | 0.572865 | 5_3:-41882067 | Msa0812060:CDS |
| GTAGGAGTCGGAGTAGAAGT+AGG | 0.573084 | 5_3:-41881774 | Msa0812060:CDS |
| ATGCTGAAAGATACAGGGAT+CGG | 0.578326 | 5_3:-41881948 | Msa0812060:CDS |
| GTAGTAGGCGCCATCGCAGT+AGG | 0.582103 | 5_3:-41881792 | Msa0812060:CDS |
| GCAAAGGACTTTCTCTAGCA+AGG | 0.583455 | 5_3:+41886733 | None:intergenic |
| GTGTAACTGTTGGAGTGAGA+GGG | 0.583469 | 5_3:-41886813 | Msa0812060:five_prime_UTR |
| GTGGACTAGAGCGTGAGTCA+TGG | 0.585031 | 5_3:+41881713 | None:intergenic |
| AGTCTAAAACTTGCAAAGCA+GGG | 0.585675 | 5_3:+41881341 | None:intergenic |
| TCGTACCACAATGTGTAGTA+GGG | 0.586324 | 5_3:+41882301 | None:intergenic |
| TTTCTCCTGGATCTAATGGA+CGG | 0.588245 | 5_3:-41884176 | Msa0812060:CDS |
| ATTCCTAGAAGGGATAATAG+TGG | 0.588421 | 5_3:-41881586 | Msa0812060:CDS |
| GAAAGGGCAGCTTTCACAGA+AGG | 0.590339 | 5_3:+41882231 | None:intergenic |
| GGCGCCATCGCAGTAGGAGT+CGG | 0.590973 | 5_3:-41881786 | Msa0812060:CDS |
| ACCGGGATAGGGACTATGAG+AGG | 0.593083 | 5_3:-41881924 | Msa0812060:CDS |
| TTCTTACTTCCATCTCTCTG+TGG | 0.595516 | 5_3:+41881694 | None:intergenic |
| CTACACATTGTGGTACGACA+GGG | 0.597615 | 5_3:-41882296 | Msa0812060:CDS |
| TACTCCGACTCCTACTGCGA+TGG | 0.600763 | 5_3:+41881782 | None:intergenic |
| ATGACAGAATATTCATGCAA+AGG | 0.601691 | 5_3:+41886717 | None:intergenic |
| TGGAGATACAGACTTCTGGC+AGG | 0.602465 | 5_3:-41886766 | Msa0812060:CDS |
| CTGACCAAAAGAGACTGAAA+GGG | 0.606327 | 5_3:+41882215 | None:intergenic |
| AAGCAAAGGAGATGCCAACA+TGG | 0.607508 | 5_3:-41881614 | Msa0812060:CDS |
| TATGACAACAGCATTGGCAA+TGG | 0.607613 | 5_3:-41881814 | Msa0812060:CDS |
| TCACTGTCAAGCAGATGCAT+GGG | 0.608557 | 5_3:-41886538 | Msa0812060:CDS |
| CCGAGATGCTGAAAGATACA+GGG | 0.609600 | 5_3:-41881953 | Msa0812060:CDS |
| TCCTGAAAGGGATAGGGACA+GGG | 0.610463 | 5_3:-41882061 | Msa0812060:CDS |
| CAGTGTCATCAGAACCGTGA+CGG | 0.611533 | 5_3:+41882265 | None:intergenic |
| AAAGATAACGAACCTGTCCA+AGG | 0.612596 | 5_3:+41884118 | None:intergenic |
| AGAGCCGTGAATATCCTGAA+AGG | 0.614212 | 5_3:-41882074 | Msa0812060:CDS |
| CTGGTTTGAGCCATATGCAA+AGG | 0.614974 | 5_3:-41885052 | Msa0812060:CDS |
| ATACAATCAAGTTGATCATG+TGG | 0.617743 | 5_3:-41886636 | Msa0812060:CDS |
| TCAACTGAACAATGGAAGCA+TGG | 0.617767 | 5_3:+41881289 | None:intergenic |
| AATGGACGGATGACTACGAT+GGG | 0.618551 | 5_3:-41884162 | Msa0812060:CDS |
| ACAGGGGAAACCACCCGTCA+CGG | 0.619623 | 5_3:-41882279 | Msa0812060:CDS |
| AGGGCAGCTTTCACAGAAGG+TGG | 0.621262 | 5_3:+41882234 | None:intergenic |
| CCTGTCCAAGGAGCAAATCA+CGG | 0.626413 | 5_3:+41884130 | None:intergenic |
| GCCATATGCAAAGGATGATG+AGG | 0.627558 | 5_3:-41885043 | Msa0812060:intron |
| TCATGTGGAACCATGGATGA+CGG | 0.627735 | 5_3:-41886621 | Msa0812060:CDS |
| TGTAACTGTTGGAGTGAGAG+GGG | 0.627998 | 5_3:-41886812 | Msa0812060:five_prime_UTR |
| TGGATGACGGGGAACTGTCG+TGG | 0.628076 | 5_3:-41886608 | Msa0812060:CDS |
| CTCTTATGTAAGGAGAATCA+GGG | 0.628997 | 5_3:+41886504 | None:intergenic |
| GGGTGAAGAATCCCTTGTAG+AGG | 0.636783 | 5_3:+41882176 | None:intergenic |
| AAGTTGATCATGTGGAACCA+TGG | 0.636947 | 5_3:-41886628 | Msa0812060:CDS |
| TAATGGACGGATGACTACGA+TGG | 0.637953 | 5_3:-41884163 | Msa0812060:CDS |
| ATTACAGGAACTGGGATGCG+AGG | 0.640293 | 5_3:+41882360 | None:intergenic |
| ACATAGTTTCAACTGAACAA+TGG | 0.642080 | 5_3:+41881281 | None:intergenic |
| CCTGACGCATTACAGGAACT+GGG | 0.642825 | 5_3:+41882352 | None:intergenic |
| ATGCTGATCCAAAGACTCTG+TGG | 0.643414 | 5_3:-41885077 | Msa0812060:CDS |
| AAACTCCCTACTACACATTG+TGG | 0.647894 | 5_3:-41882306 | Msa0812060:CDS |
| GTCATCAGAACCGTGACGGG+TGG | 0.647960 | 5_3:+41882269 | None:intergenic |
| ATGTGGAACCATGGATGACG+GGG | 0.653377 | 5_3:-41886619 | Msa0812060:CDS |
| CCGGGATAGGGACTATGAGA+GGG | 0.668727 | 5_3:-41881923 | Msa0812060:CDS |
| AGAGCGTGAGTCATGGCGTG+CGG | 0.670383 | 5_3:+41881720 | None:intergenic |
| TGAGAGGGACAGATCCAGGA+GGG | 0.674889 | 5_3:-41881908 | Msa0812060:CDS |
| TGATTCTCCTTACATAAGAG+CGG | 0.678807 | 5_3:-41886501 | Msa0812060:intron |
| TCCCTTGTAGAGGCTCGATG+TGG | 0.691841 | 5_3:+41882186 | None:intergenic |
| TGTCAAATGTTGACTCTCGG+CGG | 0.693107 | 5_3:+41886841 | None:intergenic |
| TACACATTGTGGTACGACAG+GGG | 0.693296 | 5_3:-41882295 | Msa0812060:CDS |
| TTATGACCGAGATAGGAACA+AGG | 0.707631 | 5_3:-41881977 | Msa0812060:CDS |
| GGTGATTTAGGTGAAAGCAA+AGG | 0.714464 | 5_3:-41881628 | Msa0812060:CDS |
| GCCACATCGAGCCTCTACAA+GGG | 0.725791 | 5_3:-41882187 | Msa0812060:CDS |
| ATGAGAGGGACAGATCCAGG+AGG | 0.739775 | 5_3:-41881909 | Msa0812060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAAATTCTTTTTATATG+CGG | + | chr5_3:41881952-41881971 | None:intergenic | 10.0% |
| !!! | AAAATTTAATTTTATCTATG+AGG | - | chr5_3:41884632-41884651 | Msa0812060:intron | 10.0% |
| !!! | AAATTTAATTTTATCTATGA+GGG | - | chr5_3:41884633-41884652 | Msa0812060:intron | 10.0% |
| !! | TTTAAAAATCTAAATATCAA+GGG | + | chr5_3:41885203-41885222 | None:intergenic | 10.0% |
| !! | ATAAAATTAAAAAAGTAGAA+AGG | + | chr5_3:41885871-41885890 | None:intergenic | 10.0% |
| !! | TGAATTATTTATTGAATTAC+TGG | - | chr5_3:41881565-41881584 | Msa0812060:CDS | 15.0% |
| !! | AGAAAATTAACTACTAATAA+GGG | + | chr5_3:41881710-41881729 | None:intergenic | 15.0% |
| !! | AAGAAAATTAACTACTAATA+AGG | + | chr5_3:41881711-41881730 | None:intergenic | 15.0% |
| !!! | TACTTGTTTGATTTAAATTA+TGG | - | chr5_3:41882915-41882934 | Msa0812060:intron | 15.0% |
| !!! | ACTTGTTTGATTTAAATTAT+GGG | - | chr5_3:41882916-41882935 | Msa0812060:intron | 15.0% |
| !! | TTAAATAATCATGGATATTA+CGG | + | chr5_3:41883774-41883793 | None:intergenic | 15.0% |
| !! | CTAAAAGCTAAAATTAAAAA+AGG | + | chr5_3:41883989-41884008 | None:intergenic | 15.0% |
| !!! | CTTTTTTAATTTTAGCTTTT+AGG | - | chr5_3:41883987-41884006 | Msa0812060:intron | 15.0% |
| !! | AAAAACTTAATAAATGACAT+TGG | + | chr5_3:41884220-41884239 | None:intergenic | 15.0% |
| !!! | AATTTAATTTTATCTATGAG+GGG | - | chr5_3:41884634-41884653 | Msa0812060:intron | 15.0% |
| !! | TTAAAAATCTAAATATCAAG+GGG | + | chr5_3:41885202-41885221 | None:intergenic | 15.0% |
| !! | GTTTAAAAATCTAAATATCA+AGG | + | chr5_3:41885204-41885223 | None:intergenic | 15.0% |
| !! | TTTAAACATAATGACTTATA+AGG | - | chr5_3:41885217-41885236 | Msa0812060:intron | 15.0% |
| !!! | TAATCAAATTGTTAGATTTT+GGG | - | chr5_3:41885643-41885662 | Msa0812060:intron | 15.0% |
| !! | TTTCAAATTTGATAAAATTG+AGG | - | chr5_3:41885765-41885784 | Msa0812060:intron | 15.0% |
| !! | TTCAAATTTGATAAAATTGA+GGG | - | chr5_3:41885766-41885785 | Msa0812060:intron | 15.0% |
| !! | TTTATTAAAAGAAGCAAATA+AGG | + | chr5_3:41886398-41886417 | None:intergenic | 15.0% |
| !!! | TCTTTTAATAAATACTACTT+AGG | - | chr5_3:41886406-41886425 | Msa0812060:intron | 15.0% |
| !!! | CTTTTAATAAATACTACTTA+GGG | - | chr5_3:41886407-41886426 | Msa0812060:intron | 15.0% |
| !! | ATGTATACTAAATTTATTTC+TGG | - | chr5_3:41887817-41887836 | Msa0812060:intron | 15.0% |
| !! | TTCATTGGAAATTGTAAATT+GGG | + | chr5_3:41881386-41881405 | None:intergenic | 20.0% |
| !! | TTTCATTGGAAATTGTAAAT+TGG | + | chr5_3:41881387-41881406 | None:intergenic | 20.0% |
| !! | ATTTACAATTTCCAATGAAA+AGG | - | chr5_3:41881387-41881406 | Msa0812060:three_prime_UTR | 20.0% |
| !! | TTTACAATTTCCAATGAAAA+GGG | - | chr5_3:41881388-41881407 | Msa0812060:three_prime_UTR | 20.0% |
| !!! | AAAAAAAAAACCCTTTTCAT+TGG | + | chr5_3:41881401-41881420 | None:intergenic | 20.0% |
| !! | AACGAAAGAAAATAAATCAT+GGG | + | chr5_3:41881432-41881451 | None:intergenic | 20.0% |
| !! | AAACGAAAGAAAATAAATCA+TGG | + | chr5_3:41881433-41881452 | None:intergenic | 20.0% |
| !!! | TGATTTATTTTCTTTCGTTT+AGG | - | chr5_3:41881433-41881452 | Msa0812060:three_prime_UTR | 20.0% |
| !!! | GATTTATTTTCTTTCGTTTA+GGG | - | chr5_3:41881434-41881453 | Msa0812060:three_prime_UTR | 20.0% |
| !! | AATTCAAATAGTAGAAAGAA+GGG | + | chr5_3:41881480-41881499 | None:intergenic | 20.0% |
| !!! | TTTGTTTTTTCTTTTGTTGT+AGG | - | chr5_3:41882299-41882318 | Msa0812060:CDS | 20.0% |
| !! | TAAATAATCATGGATATTAC+GGG | + | chr5_3:41883773-41883792 | None:intergenic | 20.0% |
| !! | CTAAAAGACTTAAATAATCA+TGG | + | chr5_3:41883783-41883802 | None:intergenic | 20.0% |
| !! | ACAAGATAAAATGGATATAA+GGG | + | chr5_3:41884039-41884058 | None:intergenic | 20.0% |
| !! | TCTAATTGTAAACTAAATAG+AGG | - | chr5_3:41884414-41884433 | Msa0812060:intron | 20.0% |
| !! | TACCAAAATCTTGATAAATT+TGG | + | chr5_3:41884800-41884819 | None:intergenic | 20.0% |
| !! | AAACAAATAACTATCTTTCA+TGG | + | chr5_3:41884856-41884875 | None:intergenic | 20.0% |
| !! | ATGAAAGATAGTTATTTGTT+TGG | - | chr5_3:41884855-41884874 | Msa0812060:intron | 20.0% |
| !! | TGAAAGATAGTTATTTGTTT+GGG | - | chr5_3:41884856-41884875 | Msa0812060:intron | 20.0% |
| !!! | TCGAATGAATATCTATTTTA+GGG | - | chr5_3:41884890-41884909 | Msa0812060:intron | 20.0% |
| !!! | TTTTTTTTTCCTTTTTACCA+CGG | - | chr5_3:41885477-41885496 | Msa0812060:intron | 20.0% |
| !!! | GTAATCAAATTGTTAGATTT+TGG | - | chr5_3:41885642-41885661 | Msa0812060:intron | 20.0% |
| !! | ATTAAAAAAGTAGAAAGGAA+TGG | + | chr5_3:41885866-41885885 | None:intergenic | 20.0% |
| !! | AAAAATGTTAAGGGAAATAT+AGG | + | chr5_3:41886113-41886132 | None:intergenic | 20.0% |
| !!! | ATTCAAACTTTTGATATTCT+TGG | - | chr5_3:41886171-41886190 | Msa0812060:intron | 20.0% |
| !! | TGATATTCTTGGTTTATAAA+AGG | - | chr5_3:41886182-41886201 | Msa0812060:intron | 20.0% |
| !!! | TAGACTTAATGATCATTTTA+TGG | - | chr5_3:41887868-41887887 | Msa0812060:intron | 20.0% |
| ! | NNNNNAATCAAAAACTCGCT+AGG | - | chr5_3:41881255-41881274 | Msa0812060:three_prime_UTR | 25.0% |
| ! | NNNNAATCAAAAACTCGCTA+GGG | - | chr5_3:41881256-41881275 | Msa0812060:three_prime_UTR | 25.0% |
| ! | TAGAAAAAAAGAAAAACGCA+AGG | + | chr5_3:41881342-41881361 | None:intergenic | 25.0% |
| ! | TCATTGGAAATTGTAAATTG+GGG | + | chr5_3:41881385-41881404 | None:intergenic | 25.0% |
| ! | ATTCAAATAGTAGAAAGAAG+GGG | + | chr5_3:41881479-41881498 | None:intergenic | 25.0% |
| ! | GAATTCAAATAGTAGAAAGA+AGG | + | chr5_3:41881481-41881500 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTGTTTGACTGTT+TGG | - | chr5_3:41881858-41881877 | Msa0812060:CDS | 25.0% |
| !!! | TAAGTTTTGTTTGACTGTTT+GGG | - | chr5_3:41881859-41881878 | Msa0812060:CDS | 25.0% |
| ! | TTTACCATATGAGTTACATA+TGG | - | chr5_3:41882122-41882141 | Msa0812060:CDS | 25.0% |
| ! | TTACCATATGAGTTACATAT+GGG | - | chr5_3:41882123-41882142 | Msa0812060:CDS | 25.0% |
| ! | ATAGAAGAACATAATAGAAC+TGG | + | chr5_3:41882245-41882264 | None:intergenic | 25.0% |
| !!! | CATTGTTACAATTGTTGTTT+TGG | - | chr5_3:41882265-41882284 | Msa0812060:CDS | 25.0% |
| ! | ATATCTCATCAATAACTTCA+TGG | + | chr5_3:41882538-41882557 | None:intergenic | 25.0% |
| !! | TATTTTCTTGATATGCAAGA+TGG | + | chr5_3:41882856-41882875 | None:intergenic | 25.0% |
| ! | ATTTAAATTATGGGTCTGTT+TGG | - | chr5_3:41882925-41882944 | Msa0812060:intron | 25.0% |
| ! | TTATAAGCTACTCTGTATAT+TGG | + | chr5_3:41883068-41883087 | None:intergenic | 25.0% |
| ! | TGAAATGTTATAACAGAGTT+TGG | - | chr5_3:41883235-41883254 | Msa0812060:intron | 25.0% |
| !!! | TTTTTCAAAAATCGACAACT+TGG | + | chr5_3:41883444-41883463 | None:intergenic | 25.0% |
| !! | AATACTATGTTTTATACCAC+AGG | - | chr5_3:41883818-41883837 | Msa0812060:intron | 25.0% |
| ! | ATGAAAACTAGAAGTAAAAG+AGG | + | chr5_3:41883906-41883925 | None:intergenic | 25.0% |
| ! | CACAAGATAAAATGGATATA+AGG | + | chr5_3:41884040-41884059 | None:intergenic | 25.0% |
| !!! | GATTTTGAAATTTATCGCTT+TGG | - | chr5_3:41884183-41884202 | Msa0812060:CDS | 25.0% |
| ! | TAATAAATGACATTGGATGA+CGG | + | chr5_3:41884213-41884232 | None:intergenic | 25.0% |
| ! | CTTTCTTATGATATCAACTA+TGG | + | chr5_3:41884375-41884394 | None:intergenic | 25.0% |
| !! | TTGAAAATGGTCTTACATTA+AGG | - | chr5_3:41884473-41884492 | Msa0812060:intron | 25.0% |
| !! | TGAAAATGGTCTTACATTAA+GGG | - | chr5_3:41884474-41884493 | Msa0812060:intron | 25.0% |
| ! | GATAAAGAAATATGAGAAGT+AGG | - | chr5_3:41884496-41884515 | Msa0812060:intron | 25.0% |
| !! | AGAAGTAGGTCTTATAATTA+GGG | - | chr5_3:41884510-41884529 | Msa0812060:intron | 25.0% |
| !! | AGCCAAATTTATCAAGATTT+TGG | - | chr5_3:41884795-41884814 | Msa0812060:intron | 25.0% |
| ! | ATAACTATCTTTCATGGAAA+AGG | + | chr5_3:41884850-41884869 | None:intergenic | 25.0% |
| !! | GTCGAATGAATATCTATTTT+AGG | - | chr5_3:41884889-41884908 | Msa0812060:intron | 25.0% |
| ! | CAAATGCATTTAGATGATAA+CGG | - | chr5_3:41885161-41885180 | Msa0812060:intron | 25.0% |
| !! | AGTCAAATAATTATTTTCCC+TGG | + | chr5_3:41885243-41885262 | None:intergenic | 25.0% |
| !! | TTTCACACTTTCAAGATTTT+TGG | - | chr5_3:41885393-41885412 | Msa0812060:intron | 25.0% |
| ! | AGTATACTTATAAGAATTGC+TGG | + | chr5_3:41885439-41885458 | None:intergenic | 25.0% |
| !! | TAAATACTCAGTTTTCTTCT+GGG | + | chr5_3:41885546-41885565 | None:intergenic | 25.0% |
| !! | TTAAATACTCAGTTTTCTTC+TGG | + | chr5_3:41885547-41885566 | None:intergenic | 25.0% |
| !!! | AATAAGACTTATTTTAGTCC+TGG | - | chr5_3:41885584-41885603 | Msa0812060:intron | 25.0% |
| !!! | TTATTTTAGTCCTGGTTAAA+GGG | - | chr5_3:41885592-41885611 | Msa0812060:intron | 25.0% |
| !! | TAATAGAAACACTATCCTTT+TGG | + | chr5_3:41885703-41885722 | None:intergenic | 25.0% |
| ! | AAGTAGAATACTATTCTTCA+AGG | - | chr5_3:41885739-41885758 | Msa0812060:intron | 25.0% |
| ! | AGTAGAATACTATTCTTCAA+GGG | - | chr5_3:41885740-41885759 | Msa0812060:intron | 25.0% |
| ! | AAATTTGATAAAATTGAGGG+AGG | - | chr5_3:41885769-41885788 | Msa0812060:intron | 25.0% |
| ! | ATGCAAAATTAATGACACAT+AGG | + | chr5_3:41885928-41885947 | None:intergenic | 25.0% |
| ! | AAGGAAATTAAGCTTCATAA+AGG | + | chr5_3:41885986-41886005 | None:intergenic | 25.0% |
| ! | AAAGTTTGAATCATAAGTGA+GGG | + | chr5_3:41886162-41886181 | None:intergenic | 25.0% |
| ! | AAAAGTTTGAATCATAAGTG+AGG | + | chr5_3:41886163-41886182 | None:intergenic | 25.0% |
| ! | ATTCTTGGTTTATAAAAGGA+AGG | - | chr5_3:41886186-41886205 | Msa0812060:intron | 25.0% |
| !! | TTATCCCATTGATATTTTGT+TGG | - | chr5_3:41886437-41886456 | Msa0812060:intron | 25.0% |
| ! | AATACTCGCGAAAAAAATAA+AGG | + | chr5_3:41886578-41886597 | None:intergenic | 25.0% |
| ! | CTTATACAAGTTAAATTACC+AGG | + | chr5_3:41886761-41886780 | None:intergenic | 25.0% |
| ! | AGAGAAGTTATGATTATGAT+AGG | - | chr5_3:41887319-41887338 | Msa0812060:intron | 25.0% |
| ! | GCTAAACTTAAAGATTTGTA+CGG | - | chr5_3:41887543-41887562 | Msa0812060:intron | 25.0% |
| ! | TTCTAATGTTGAATACCTTT+AGG | - | chr5_3:41887954-41887973 | Msa0812060:intron | 25.0% |
| !! | TTTAAAGCTAAAACTCCTAA+AGG | + | chr5_3:41887972-41887991 | None:intergenic | 25.0% |
| CATTGGAAATTGTAAATTGG+GGG | + | chr5_3:41881384-41881403 | None:intergenic | 30.0% | |
| TTGTATAAGTCAATCCAAAC+AGG | + | chr5_3:41881824-41881843 | None:intergenic | 30.0% | |
| ! | AAAACTTATGTTGGTGGATA+AGG | + | chr5_3:41881847-41881866 | None:intergenic | 30.0% |
| TCAAACAAAACTTATGTTGG+TGG | + | chr5_3:41881853-41881872 | None:intergenic | 30.0% | |
| CAGTCAAACAAAACTTATGT+TGG | + | chr5_3:41881856-41881875 | None:intergenic | 30.0% | |
| TACATATGGGACTTTACTTA+CGG | - | chr5_3:41882136-41882155 | Msa0812060:CDS | 30.0% | |
| GATAAGCACTTCACTTTAAA+TGG | - | chr5_3:41882165-41882184 | Msa0812060:CDS | 30.0% | |
| TGTGATTGAAATGAAACAGT+AGG | - | chr5_3:41882195-41882214 | Msa0812060:CDS | 30.0% | |
| !!! | TTTTGTCAAATGTTGACTCT+CGG | + | chr5_3:41882357-41882376 | None:intergenic | 30.0% |
| TGACAAAATTGTGTAACTGT+TGG | - | chr5_3:41882369-41882388 | Msa0812060:CDS | 30.0% | |
| ! | TACATTTTCTGACTCAATCA+TGG | - | chr5_3:41882406-41882425 | Msa0812060:intron | 30.0% |
| ATGACAGAATATTCATGCAA+AGG | + | chr5_3:41882478-41882497 | None:intergenic | 30.0% | |
| !! | ATACAATCAAGTTGATCATG+TGG | - | chr5_3:41882556-41882575 | Msa0812060:intron | 30.0% |
| TTCCTAAACTCGATACAAAA+TGG | + | chr5_3:41882802-41882821 | None:intergenic | 30.0% | |
| TGCAAGATGGCTAATTATAA+AGG | + | chr5_3:41882843-41882862 | None:intergenic | 30.0% | |
| ATTATCAATCAAACTGTCTC+AGG | + | chr5_3:41882887-41882906 | None:intergenic | 30.0% | |
| ! | CTTATTTGAGCTTTATCTAC+TGG | - | chr5_3:41882953-41882972 | Msa0812060:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr5_3:41882977-41882996 | Msa0812060:intron | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | - | chr5_3:41882978-41882997 | Msa0812060:intron | 30.0% |
| GCTTATGTATAAGTTTGCAT+AGG | + | chr5_3:41883147-41883166 | None:intergenic | 30.0% | |
| TTATACATAAGCGCTTATCA+TGG | - | chr5_3:41883155-41883174 | Msa0812060:intron | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | - | chr5_3:41883202-41883221 | Msa0812060:intron | 30.0% | |
| ATAGTAGTAAGCAAAAACCA+TGG | + | chr5_3:41883341-41883360 | None:intergenic | 30.0% | |
| TCACATCTATAAGCATGAAT+TGG | - | chr5_3:41883369-41883388 | Msa0812060:intron | 30.0% | |
| CTTAGGTCTTAAGATTTCAA+GGG | + | chr5_3:41883480-41883499 | None:intergenic | 30.0% | |
| GGTCAAATGATTGACAAAAT+AGG | + | chr5_3:41883511-41883530 | None:intergenic | 30.0% | |
| ATTCAATCTGCATTTGTTTC+AGG | - | chr5_3:41883672-41883691 | Msa0812060:intron | 30.0% | |
| CTCTATTTGTGTACTATGTT+TGG | - | chr5_3:41883739-41883758 | Msa0812060:intron | 30.0% | |
| AAAACTAGAAGTAAAAGAGG+AGG | + | chr5_3:41883903-41883922 | None:intergenic | 30.0% | |
| !!! | CTTCTAGTTTTCATGAAGTT+AGG | - | chr5_3:41883912-41883931 | Msa0812060:intron | 30.0% |
| ! | TGATTCCTTATGTTGGTTAT+AGG | - | chr5_3:41884068-41884087 | Msa0812060:intron | 30.0% |
| !! | GTAAATGGGTCTTATTGTAA+GGG | + | chr5_3:41884289-41884308 | None:intergenic | 30.0% |
| !! | TGTAAATGGGTCTTATTGTA+AGG | + | chr5_3:41884290-41884309 | None:intergenic | 30.0% |
| AGACCCATTTACAAAATTCA+CGG | - | chr5_3:41884297-41884316 | Msa0812060:intron | 30.0% | |
| ! | TACCCGTGAATTTTGTAAAT+GGG | + | chr5_3:41884303-41884322 | None:intergenic | 30.0% |
| ! | ATACCCGTGAATTTTGTAAA+TGG | + | chr5_3:41884304-41884323 | None:intergenic | 30.0% |
| TGCAAGTGAAAGTTTGAAAA+TGG | - | chr5_3:41884460-41884479 | Msa0812060:intron | 30.0% | |
| ! | GAGAAGTAGGTCTTATAATT+AGG | - | chr5_3:41884509-41884528 | Msa0812060:intron | 30.0% |
| ! | TAAGAAAAAGTACGACATCA+AGG | + | chr5_3:41884680-41884699 | None:intergenic | 30.0% |
| ! | TTTTGTACCTTTGCTTGATA+TGG | - | chr5_3:41884728-41884747 | Msa0812060:intron | 30.0% |
| ! | TTGGTATTTATGTTTTGCTG+TGG | - | chr5_3:41884814-41884833 | Msa0812060:intron | 30.0% |
| GCATTTAAAAGTTCTCTCTT+AGG | - | chr5_3:41884916-41884935 | Msa0812060:intron | 30.0% | |
| !! | AACTGATGATGCTTTATTTC+AGG | - | chr5_3:41884990-41885009 | Msa0812060:intron | 30.0% |
| ! | TTATTTCAGGAATTTTCTCC+TGG | - | chr5_3:41885003-41885022 | Msa0812060:intron | 30.0% |
| AAATCTAAATATCAAGGGGT+CGG | + | chr5_3:41885198-41885217 | None:intergenic | 30.0% | |
| ! | TTCCTCATCATCACATATTT+TGG | - | chr5_3:41885352-41885371 | Msa0812060:intron | 30.0% |
| !!! | TATTTTGGAGTAACAGTATG+AGG | - | chr5_3:41885367-41885386 | Msa0812060:intron | 30.0% |
| !!! | CTTATTTTAGTCCTGGTTAA+AGG | - | chr5_3:41885591-41885610 | Msa0812060:intron | 30.0% |
| GTTAAAGGGACACTAATATT+GGG | - | chr5_3:41885606-41885625 | Msa0812060:intron | 30.0% | |
| CGAATAGAGGTTAAATTTGA+TGG | - | chr5_3:41885672-41885691 | Msa0812060:intron | 30.0% | |
| AATTTGATGGAAACACCAAA+AGG | - | chr5_3:41885685-41885704 | Msa0812060:intron | 30.0% | |
| TAAGCTTCATAAAGGATTAG+AGG | + | chr5_3:41885978-41885997 | None:intergenic | 30.0% | |
| !! | TTTCTTTCTCTAAGATCTCA+AGG | + | chr5_3:41886005-41886024 | None:intergenic | 30.0% |
| TGAGATCTTAGAGAAAGAAA+TGG | - | chr5_3:41886005-41886024 | Msa0812060:intron | 30.0% | |
| GAGATCTTAGAGAAAGAAAT+GGG | - | chr5_3:41886006-41886025 | Msa0812060:intron | 30.0% | |
| TGCAAAAACCTGATATACAA+AGG | + | chr5_3:41886065-41886084 | None:intergenic | 30.0% | |
| ! | ATTTCCCTTAACATTTTTCC+TGG | - | chr5_3:41886115-41886134 | Msa0812060:intron | 30.0% |
| ! | TTTCCCTTAACATTTTTCCT+GGG | - | chr5_3:41886116-41886135 | Msa0812060:intron | 30.0% |
| ATACCCAGGAAAAATGTTAA+GGG | + | chr5_3:41886122-41886141 | None:intergenic | 30.0% | |
| TATACCCAGGAAAAATGTTA+AGG | + | chr5_3:41886123-41886142 | None:intergenic | 30.0% | |
| ! | TTAACATTTTTCCTGGGTAT+AGG | - | chr5_3:41886122-41886141 | Msa0812060:intron | 30.0% |
| ! | TAACATTTTTCCTGGGTATA+GGG | - | chr5_3:41886123-41886142 | Msa0812060:intron | 30.0% |
| AAGTTTGAATCATAAGTGAG+GGG | + | chr5_3:41886161-41886180 | None:intergenic | 30.0% | |
| ACGACCAACAAAATATCAAT+GGG | + | chr5_3:41886444-41886463 | None:intergenic | 30.0% | |
| TACGACCAACAAAATATCAA+TGG | + | chr5_3:41886445-41886464 | None:intergenic | 30.0% | |
| !!! | CACTTTTTTACCCTAAGAAA+CGG | + | chr5_3:41886622-41886641 | None:intergenic | 30.0% |
| GTTTCTTAGGGTAAAAAAGT+GGG | - | chr5_3:41886621-41886640 | Msa0812060:CDS | 30.0% | |
| GAATGAAGGGTAAAAATATG+GGG | + | chr5_3:41886739-41886758 | None:intergenic | 30.0% | |
| GGAATGAAGGGTAAAAATAT+GGG | + | chr5_3:41886740-41886759 | None:intergenic | 30.0% | |
| AGGAATGAAGGGTAAAAATA+TGG | + | chr5_3:41886741-41886760 | None:intergenic | 30.0% | |
| !! | ATATTTTTACCCTTCATTCC+TGG | - | chr5_3:41886740-41886759 | Msa0812060:CDS | 30.0% |
| GTTAAATTACCAGGAATGAA+GGG | + | chr5_3:41886752-41886771 | None:intergenic | 30.0% | |
| AGTTAAATTACCAGGAATGA+AGG | + | chr5_3:41886753-41886772 | None:intergenic | 30.0% | |
| CATAATCATAACTTCTCTCT+CGG | + | chr5_3:41887317-41887336 | None:intergenic | 30.0% | |
| GAAGTTATGATTATGATAGG+AGG | - | chr5_3:41887322-41887341 | Msa0812060:intron | 30.0% | |
| AAAGATTTGTACGGTGATTT+AGG | - | chr5_3:41887552-41887571 | Msa0812060:intron | 30.0% | |
| ! | TCCATTGAAAAAGAGCATAT+TGG | - | chr5_3:41887706-41887725 | Msa0812060:intron | 30.0% |
| !!! | TCCAATATGCTCTTTTTCAA+TGG | + | chr5_3:41887710-41887729 | None:intergenic | 30.0% |
| GATAATGAAAGGCAATGAAA+AGG | + | chr5_3:41887738-41887757 | None:intergenic | 30.0% | |
| ACTTGGTTGACATAAGTTAT+AGG | - | chr5_3:41887758-41887777 | Msa0812060:intron | 30.0% | |
| ACATAGTTTCAACTGAACAA+TGG | + | chr5_3:41887914-41887933 | None:intergenic | 30.0% | |
| GTTTGGGTAATCGAAAAGAA+TGG | + | chr5_3:41881129-41881148 | None:intergenic | 35.0% | |
| AACCAATCTCTTCGTGTAAT+TGG | - | chr5_3:41881295-41881314 | Msa0812060:three_prime_UTR | 35.0% | |
| TACCAATTACACGAAGAGAT+TGG | + | chr5_3:41881300-41881319 | None:intergenic | 35.0% | |
| GAAAAACGCAAGGAAGAAAT+TGG | + | chr5_3:41881332-41881351 | None:intergenic | 35.0% | |
| TTGGGGGATAATTGAGATTT+GGG | + | chr5_3:41881368-41881387 | None:intergenic | 35.0% | |
| ATTGGGGGATAATTGAGATT+TGG | + | chr5_3:41881369-41881388 | None:intergenic | 35.0% | |
| !! | CTGGTACAAGTTCTGAAATT+TGG | - | chr5_3:41881584-41881603 | Msa0812060:CDS | 35.0% |
| ! | TGTGTGTAAATTTTGCAGCT+AGG | + | chr5_3:41881787-41881806 | None:intergenic | 35.0% |
| ! | ACATTTTTCATAAGTTCCCC+AGG | - | chr5_3:41881905-41881924 | Msa0812060:CDS | 35.0% |
| ! | TGTTTTCATAAGCTATCCTG+GGG | + | chr5_3:41881924-41881943 | None:intergenic | 35.0% |
| ! | CTGTTTTCATAAGCTATCCT+GGG | + | chr5_3:41881925-41881944 | None:intergenic | 35.0% |
| ! | AGCCTTAGTGTTGGAAATTT+CGG | - | chr5_3:41882058-41882077 | Msa0812060:CDS | 35.0% |
| ATCCGAAATTTCCAACACTA+AGG | + | chr5_3:41882063-41882082 | None:intergenic | 35.0% | |
| ! | AGTGTTGGAAATTTCGGATT+CGG | - | chr5_3:41882064-41882083 | Msa0812060:CDS | 35.0% |
| TCATATGGTAAATGCTTGCA+GGG | + | chr5_3:41882114-41882133 | None:intergenic | 35.0% | |
| AGTCCCATATGTAACTCATA+TGG | + | chr5_3:41882129-41882148 | None:intergenic | 35.0% | |
| ACATATGGGACTTTACTTAC+GGG | - | chr5_3:41882137-41882156 | Msa0812060:CDS | 35.0% | |
| CTCTTATGTAAGGAGAATCA+GGG | + | chr5_3:41882691-41882710 | None:intergenic | 35.0% | |
| TGATTCTCCTTACATAAGAG+CGG | - | chr5_3:41882691-41882710 | Msa0812060:intron | 35.0% | |
| ! | CACCATTTTGTATCGAGTTT+AGG | - | chr5_3:41882797-41882816 | Msa0812060:intron | 35.0% |
| TTCAAGAAATAGAGCCTGTT+TGG | + | chr5_3:41883219-41883238 | None:intergenic | 35.0% | |
| TTGTTGAATCATCAAAGCCA+AGG | - | chr5_3:41883277-41883296 | Msa0812060:intron | 35.0% | |
| CATGAATTGGCGAGATTATA+GGG | - | chr5_3:41883382-41883401 | Msa0812060:intron | 35.0% | |
| ATGAATTGGCGAGATTATAG+GGG | - | chr5_3:41883383-41883402 | Msa0812060:intron | 35.0% | |
| CTCATGAAATTGGACCAAAA+TGG | + | chr5_3:41883420-41883439 | None:intergenic | 35.0% | |
| !! | CATTTTGGTCCAATTTCATG+AGG | - | chr5_3:41883418-41883437 | Msa0812060:intron | 35.0% |
| CCTTAGGTCTTAAGATTTCA+AGG | + | chr5_3:41883481-41883500 | None:intergenic | 35.0% | |
| CCTTGAAATCTTAAGACCTA+AGG | - | chr5_3:41883478-41883497 | Msa0812060:intron | 35.0% | |
| AATCTTAAGACCTAAGGTTC+TGG | - | chr5_3:41883484-41883503 | Msa0812060:intron | 35.0% | |
| !! | GGTTGATATTTTAGAGAGCT+TGG | - | chr5_3:41883616-41883635 | Msa0812060:intron | 35.0% |
| ATGCAGATTGAATAAGAAGC+AGG | + | chr5_3:41883665-41883684 | None:intergenic | 35.0% | |
| !! | CATTTGTTTCAGGTTGTTTG+TGG | - | chr5_3:41883682-41883701 | Msa0812060:intron | 35.0% |
| ! | CTATGTTTTATACCACAGGT+TGG | - | chr5_3:41883822-41883841 | Msa0812060:intron | 35.0% |
| AAGTCAAATTTACCAACCTG+TGG | + | chr5_3:41883837-41883856 | None:intergenic | 35.0% | |
| AGTGTTGTGAATTTAGGCTT+TGG | - | chr5_3:41883864-41883883 | Msa0812060:CDS | 35.0% | |
| TTCATGAAGTTAGGAATGCT+TGG | - | chr5_3:41883921-41883940 | Msa0812060:intron | 35.0% | |
| ATGCAGCTCACAAGATAAAA+TGG | + | chr5_3:41884048-41884067 | None:intergenic | 35.0% | |
| ! | TCCTTATGTTGGTTATAGGT+TGG | - | chr5_3:41884072-41884091 | Msa0812060:intron | 35.0% |
| TCCAACCTATAACCAACATA+AGG | + | chr5_3:41884076-41884095 | None:intergenic | 35.0% | |
| ! | GTCTTATTGTAAGGGATGAA+GGG | + | chr5_3:41884281-41884300 | None:intergenic | 35.0% |
| GACCCATTTACAAAATTCAC+GGG | - | chr5_3:41884298-41884317 | Msa0812060:intron | 35.0% | |
| ! | GTAGGTCTTATAATTAGGGA+TGG | - | chr5_3:41884514-41884533 | Msa0812060:intron | 35.0% |
| GTCTTATAATTAGGGATGGA+TGG | - | chr5_3:41884518-41884537 | Msa0812060:intron | 35.0% | |
| !! | ATGTTTTGCTGTGGCTTATA+TGG | - | chr5_3:41884823-41884842 | Msa0812060:intron | 35.0% |
| ! | GAATTTTCTCCTGGATCTAA+TGG | - | chr5_3:41885012-41885031 | Msa0812060:intron | 35.0% |
| AATCTAAATATCAAGGGGTC+GGG | + | chr5_3:41885197-41885216 | None:intergenic | 35.0% | |
| ACATAATGACTTATAAGGCC+AGG | - | chr5_3:41885222-41885241 | Msa0812060:intron | 35.0% | |
| CATAATGACTTATAAGGCCA+GGG | - | chr5_3:41885223-41885242 | Msa0812060:intron | 35.0% | |
| ! | CTCCAAAATATGTGATGATG+AGG | + | chr5_3:41885357-41885376 | None:intergenic | 35.0% |
| AAAATGATGCCGTGGTAAAA+AGG | + | chr5_3:41885489-41885508 | None:intergenic | 35.0% | |
| AAAACAAGAAAATGATGCCG+TGG | + | chr5_3:41885497-41885516 | None:intergenic | 35.0% | |
| TTTCTAAACTCACTACACCT+AGG | - | chr5_3:41885518-41885537 | Msa0812060:intron | 35.0% | |
| ATATTAGTGTCCCTTTAACC+AGG | + | chr5_3:41885605-41885624 | None:intergenic | 35.0% | |
| GGTTAAAGGGACACTAATAT+TGG | - | chr5_3:41885605-41885624 | Msa0812060:intron | 35.0% | |
| CAATTTGATTACTCAAGTGC+AGG | + | chr5_3:41885634-41885653 | None:intergenic | 35.0% | |
| !!! | TAGGCAGTGCATATTTTAGT+TGG | - | chr5_3:41885804-41885823 | Msa0812060:intron | 35.0% |
| ! | TTTAGTTGGCGGATCAAAAT+AGG | - | chr5_3:41885818-41885837 | Msa0812060:intron | 35.0% |
| GAATGGATGATACACAAGAT+GGG | + | chr5_3:41885849-41885868 | None:intergenic | 35.0% | |
| TTTATCTCCTCTTCTTTCTG+AGG | - | chr5_3:41885886-41885905 | Msa0812060:intron | 35.0% | |
| ! | TTGTTTCCCCTGCAAATTTT+AGG | - | chr5_3:41885950-41885969 | Msa0812060:intron | 35.0% |
| ! | TGTTTCCCCTGCAAATTTTA+GGG | - | chr5_3:41885951-41885970 | Msa0812060:intron | 35.0% |
| GTAAAACGCCTTTGTATATC+AGG | - | chr5_3:41886054-41886073 | Msa0812060:intron | 35.0% | |
| ! | AACATTTTTCCTGGGTATAG+GGG | - | chr5_3:41886124-41886143 | Msa0812060:intron | 35.0% |
| ! | ACTTGTGCTGACAACATAAA+AGG | + | chr5_3:41886534-41886553 | None:intergenic | 35.0% |
| CGTTTCTTAGGGTAAAAAAG+TGG | - | chr5_3:41886620-41886639 | Msa0812060:CDS | 35.0% | |
| AAGTGGGTAATTATCTCTTC+CGG | - | chr5_3:41886637-41886656 | Msa0812060:CDS | 35.0% | |
| !!! | TCAGTGCCATTTTTTTCATG+AGG | + | chr5_3:41887063-41887082 | None:intergenic | 35.0% |
| TATCCCTTTCAGGATATTCA+CGG | + | chr5_3:41887125-41887144 | None:intergenic | 35.0% | |
| TGAATATCCTGAAAGGGATA+GGG | - | chr5_3:41887125-41887144 | Msa0812060:intron | 35.0% | |
| ACAGATATTATGACCGAGAT+AGG | - | chr5_3:41887208-41887227 | Msa0812060:intron | 35.0% | |
| TCTAGGAATTCTTTCCATGT+TGG | + | chr5_3:41887595-41887614 | None:intergenic | 35.0% | |
| ACATGGAAAGAATTCCTAGA+AGG | - | chr5_3:41887595-41887614 | Msa0812060:intron | 35.0% | |
| CATGGAAAGAATTCCTAGAA+GGG | - | chr5_3:41887596-41887615 | Msa0812060:intron | 35.0% | |
| ATTCCTAGAAGGGATAATAG+TGG | - | chr5_3:41887606-41887625 | Msa0812060:intron | 35.0% | |
| !!! | ATGCTCTTTTTCAATGGATC+CGG | + | chr5_3:41887704-41887723 | None:intergenic | 35.0% |
| CATTGCCTTTCATTATCACT+TGG | - | chr5_3:41887741-41887760 | Msa0812060:intron | 35.0% | |
| ! | GTCAACCAAGTGATAATGAA+AGG | + | chr5_3:41887749-41887768 | None:intergenic | 35.0% |
| ! | AGTCTAAAACTTGCAAAGCA+GGG | + | chr5_3:41887854-41887873 | None:intergenic | 35.0% |
| ! | AAGTCTAAAACTTGCAAAGC+AGG | + | chr5_3:41887855-41887874 | None:intergenic | 35.0% |
| ! | ACGACATCAGATTATTGACT+TGG | + | chr5_3:41887995-41888014 | None:intergenic | 35.0% |
| TAGTAGAAAGAAGGGGACAA+GGG | + | chr5_3:41881472-41881491 | None:intergenic | 40.0% | |
| ATAGTAGAAAGAAGGGGACA+AGG | + | chr5_3:41881473-41881492 | None:intergenic | 40.0% | |
| CTTATGCATAAGTGCCTGTT+TGG | - | chr5_3:41881807-41881826 | Msa0812060:CDS | 40.0% | |
| !! | GCTGTTTTCATAAGCTATCC+TGG | + | chr5_3:41881926-41881945 | None:intergenic | 40.0% |
| ACATTTGATATGTTCGGGCA+CGG | + | chr5_3:41882091-41882110 | None:intergenic | 40.0% | |
| CAGGGACATTTGATATGTTC+GGG | + | chr5_3:41882096-41882115 | None:intergenic | 40.0% | |
| GCAGGGACATTTGATATGTT+CGG | + | chr5_3:41882097-41882116 | None:intergenic | 40.0% | |
| CTCATATGGTAAATGCTTGC+AGG | + | chr5_3:41882115-41882134 | None:intergenic | 40.0% | |
| ATCATGGAGATACAGACTTC+TGG | - | chr5_3:41882422-41882441 | Msa0812060:intron | 40.0% | |
| TTCTCTAGCAAGGACTCAAT+TGG | + | chr5_3:41882452-41882471 | None:intergenic | 40.0% | |
| ! | AAGTTGATCATGTGGAACCA+TGG | - | chr5_3:41882564-41882583 | Msa0812060:intron | 40.0% |
| AGAAGACAGAAAGCAGTTGA+AGG | + | chr5_3:41882611-41882630 | None:intergenic | 40.0% | |
| GCTCTTATGTAAGGAGAATC+AGG | + | chr5_3:41882692-41882711 | None:intergenic | 40.0% | |
| CTACATACCGCTCTTATGTA+AGG | + | chr5_3:41882701-41882720 | None:intergenic | 40.0% | |
| TACATAAGAGCGGTATGTAG+AGG | - | chr5_3:41882701-41882720 | Msa0812060:intron | 40.0% | |
| TAGACGAAATCAGGGATAGA+TGG | - | chr5_3:41883300-41883319 | Msa0812060:intron | 40.0% | |
| GCATGAATTGGCGAGATTAT+AGG | - | chr5_3:41883381-41883400 | Msa0812060:intron | 40.0% | |
| ACAACTTGGCCTCATGAAAT+TGG | + | chr5_3:41883430-41883449 | None:intergenic | 40.0% | |
| CAAAATAGGTCCAGAACCTT+AGG | + | chr5_3:41883497-41883516 | None:intergenic | 40.0% | |
| CTGATATCAGATGTGGTTTG+TGG | - | chr5_3:41883595-41883614 | Msa0812060:intron | 40.0% | |
| !! | ATTTTAGAGAGCTTGGCTGT+TGG | - | chr5_3:41883623-41883642 | Msa0812060:intron | 40.0% |
| TTGAATAAGAAGCAGGACGT+GGG | + | chr5_3:41883658-41883677 | None:intergenic | 40.0% | |
| ATTGAATAAGAAGCAGGACG+TGG | + | chr5_3:41883659-41883678 | None:intergenic | 40.0% | |
| ! | GTTGCGAGTGTTGTGAATTT+AGG | - | chr5_3:41883858-41883877 | Msa0812060:CDS | 40.0% |
| !! | GCTGCATTGATTCCTTATGT+TGG | - | chr5_3:41884061-41884080 | Msa0812060:intron | 40.0% |
| ACCTCATCATCCTTTGCATA+TGG | + | chr5_3:41884153-41884172 | None:intergenic | 40.0% | |
| !! | GGTCTTATTGTAAGGGATGA+AGG | + | chr5_3:41884282-41884301 | None:intergenic | 40.0% |
| ! | TCTATGAGGGGTTTTCGTTA+TGG | - | chr5_3:41884646-41884665 | Msa0812060:intron | 40.0% |
| CATAGCTCCATATCAAGCAA+AGG | + | chr5_3:41884738-41884757 | None:intergenic | 40.0% | |
| TTTCTCCTGGATCTAATGGA+CGG | - | chr5_3:41885016-41885035 | Msa0812060:intron | 40.0% | |
| !! | TATATCCGTGATTTGCTCCT+TGG | - | chr5_3:41885057-41885076 | Msa0812060:CDS | 40.0% |
| AAAGATAACGAACCTGTCCA+AGG | + | chr5_3:41885077-41885096 | None:intergenic | 40.0% | |
| ATCTAAATATCAAGGGGTCG+GGG | + | chr5_3:41885196-41885215 | None:intergenic | 40.0% | |
| AGGGAGGAAATTAGTAACGT+AGG | - | chr5_3:41885785-41885804 | Msa0812060:intron | 40.0% | |
| !!! | GCAGTGCATATTTTAGTTGG+CGG | - | chr5_3:41885807-41885826 | Msa0812060:intron | 40.0% |
| GGAATGGATGATACACAAGA+TGG | + | chr5_3:41885850-41885869 | None:intergenic | 40.0% | |
| AGAGGACCCTAAAATTTGCA+GGG | + | chr5_3:41885960-41885979 | None:intergenic | 40.0% | |
| TAGAGGACCCTAAAATTTGC+AGG | + | chr5_3:41885961-41885980 | None:intergenic | 40.0% | |
| GGTCGTATGAATTGAATTCG+TGG | - | chr5_3:41886458-41886477 | Msa0812060:intron | 40.0% | |
| AGAACACAAATGATAACCGC+CGG | + | chr5_3:41886659-41886678 | None:intergenic | 40.0% | |
| GGTAAAAATATGGGGCAACA+GGG | + | chr5_3:41886731-41886750 | None:intergenic | 40.0% | |
| AAACTCCCTACTACACATTG+TGG | - | chr5_3:41886886-41886905 | Msa0812060:intron | 40.0% | |
| TCGTACCACAATGTGTAGTA+GGG | + | chr5_3:41886894-41886913 | None:intergenic | 40.0% | |
| CTGACCAAAAGAGACTGAAA+GGG | + | chr5_3:41886980-41886999 | None:intergenic | 40.0% | |
| !!! | CCATTTTTTTCATGAGGAGC+AGG | + | chr5_3:41887057-41887076 | None:intergenic | 40.0% |
| CCTGCTCCTCATGAAAAAAA+TGG | - | chr5_3:41887054-41887073 | Msa0812060:intron | 40.0% | |
| GTGAATATCCTGAAAGGGAT+AGG | - | chr5_3:41887124-41887143 | Msa0812060:intron | 40.0% | |
| TTATGACCGAGATAGGAACA+AGG | - | chr5_3:41887215-41887234 | Msa0812060:intron | 40.0% | |
| ATGCTGAAAGATACAGGGAT+CGG | - | chr5_3:41887244-41887263 | Msa0812060:intron | 40.0% | |
| CAATGCTGTTGTCATAATCC+CGG | + | chr5_3:41887374-41887393 | None:intergenic | 40.0% | |
| !! | TATGACAACAGCATTGGCAA+TGG | - | chr5_3:41887378-41887397 | Msa0812060:intron | 40.0% |
| TTCTTACTTCCATCTCTCTG+TGG | + | chr5_3:41887501-41887520 | None:intergenic | 40.0% | |
| GGTGATTTAGGTGAAAGCAA+AGG | - | chr5_3:41887564-41887583 | Msa0812060:intron | 40.0% | |
| TCACCACTATTATCCCTTCT+AGG | + | chr5_3:41887612-41887631 | None:intergenic | 40.0% | |
| AAGGGATAATAGTGGTGAAG+AGG | - | chr5_3:41887614-41887633 | Msa0812060:intron | 40.0% | |
| GGTGAAGAGGTTATTAGACT+TGG | - | chr5_3:41887627-41887646 | Msa0812060:intron | 40.0% | |
| GAAGAGGTTATTAGACTTGG+TGG | - | chr5_3:41887630-41887649 | Msa0812060:intron | 40.0% | |
| AGAATGCTTGTATCTGATGC+CGG | - | chr5_3:41887682-41887701 | Msa0812060:intron | 40.0% | |
| TCAACTGAACAATGGAAGCA+TGG | + | chr5_3:41887906-41887925 | None:intergenic | 40.0% | |
| GCTGTCTAGATGCAAATTGA+TGG | - | chr5_3:41888043-41888062 | Msa0812060:intron | 40.0% | |
| TCCAAACAGAGCCTTAGTGT+TGG | - | chr5_3:41882049-41882068 | Msa0812060:CDS | 45.0% | |
| TCCAACACTAAGGCTCTGTT+TGG | + | chr5_3:41882053-41882072 | None:intergenic | 45.0% | |
| !! | TGTCAAATGTTGACTCTCGG+CGG | + | chr5_3:41882354-41882373 | None:intergenic | 45.0% |
| TGTGTAACTGTTGGAGTGAG+AGG | - | chr5_3:41882378-41882397 | Msa0812060:CDS | 45.0% | |
| GTGTAACTGTTGGAGTGAGA+GGG | - | chr5_3:41882379-41882398 | Msa0812060:CDS | 45.0% | |
| TGTAACTGTTGGAGTGAGAG+GGG | - | chr5_3:41882380-41882399 | Msa0812060:CDS | 45.0% | |
| GCAAAGGACTTTCTCTAGCA+AGG | + | chr5_3:41882462-41882481 | None:intergenic | 45.0% | |
| TCATGTGGAACCATGGATGA+CGG | - | chr5_3:41882571-41882590 | Msa0812060:intron | 45.0% | |
| TCACTGTCAAGCAGATGCAT+GGG | - | chr5_3:41882654-41882673 | Msa0812060:intron | 45.0% | |
| ! | AGTTTGGCTTAGTGCGTTAG+TGG | - | chr5_3:41883251-41883270 | Msa0812060:intron | 45.0% |
| AAGCCAAGGTAGACGAAATC+AGG | - | chr5_3:41883291-41883310 | Msa0812060:intron | 45.0% | |
| AGCCAAGGTAGACGAAATCA+GGG | - | chr5_3:41883292-41883311 | Msa0812060:intron | 45.0% | |
| ATCCCTGATTTCGTCTACCT+TGG | + | chr5_3:41883297-41883316 | None:intergenic | 45.0% | |
| CGAAATCAGGGATAGATGGT+AGG | - | chr5_3:41883304-41883323 | Msa0812060:intron | 45.0% | |
| GGTAGGATTGAACACTTCCA+TGG | - | chr5_3:41883321-41883340 | Msa0812060:intron | 45.0% | |
| CGAGATTATAGGGGATCACT+TGG | - | chr5_3:41883392-41883411 | Msa0812060:intron | 45.0% | |
| ! | GGGATCACTTGGATCCATTT+TGG | - | chr5_3:41883403-41883422 | Msa0812060:intron | 45.0% |
| ACCACATCTGATATCAGCCA+CGG | + | chr5_3:41883592-41883611 | None:intergenic | 45.0% | |
| GTGGTGCTCAACTGAATTCT+TGG | - | chr5_3:41883701-41883720 | Msa0812060:intron | 45.0% | |
| ATGCTGATCCAAAGACTCTG+TGG | - | chr5_3:41884115-41884134 | Msa0812060:intron | 45.0% | |
| ! | CTGGTTTGAGCCATATGCAA+AGG | - | chr5_3:41884140-41884159 | Msa0812060:CDS | 45.0% |
| GCCATATGCAAAGGATGATG+AGG | - | chr5_3:41884149-41884168 | Msa0812060:CDS | 45.0% | |
| ! | TAATGGACGGATGACTACGA+TGG | - | chr5_3:41885029-41885048 | Msa0812060:intron | 45.0% |
| AATGGACGGATGACTACGAT+GGG | - | chr5_3:41885030-41885049 | Msa0812060:intron | 45.0% | |
| TTGCATTCTTGTGATGCACC+TGG | + | chr5_3:41885321-41885340 | None:intergenic | 45.0% | |
| !! | CAGTTTTCTTCTGGGAACCT+AGG | + | chr5_3:41885538-41885557 | None:intergenic | 45.0% |
| !! | TTTTGGGAGACTGCGAATAG+AGG | - | chr5_3:41885659-41885678 | Msa0812060:intron | 45.0% |
| AGCTCAACCTCAGAAAGAAG+AGG | + | chr5_3:41885896-41885915 | None:intergenic | 45.0% | |
| GAGGACCCTAAAATTTGCAG+GGG | + | chr5_3:41885959-41885978 | None:intergenic | 45.0% | |
| ATCAACGCTCACCGTTTCTT+AGG | - | chr5_3:41886608-41886627 | Msa0812060:CDS | 45.0% | |
| TCAACGCTCACCGTTTCTTA+GGG | - | chr5_3:41886609-41886628 | Msa0812060:CDS | 45.0% | |
| TGGGTAATTATCTCTTCCGG+CGG | - | chr5_3:41886640-41886659 | Msa0812060:CDS | 45.0% | |
| GGGTAAAAATATGGGGCAAC+AGG | + | chr5_3:41886732-41886751 | None:intergenic | 45.0% | |
| GTCGTACCACAATGTGTAGT+AGG | + | chr5_3:41886895-41886914 | None:intergenic | 45.0% | |
| ACTACACATTGTGGTACGAC+AGG | - | chr5_3:41886895-41886914 | Msa0812060:intron | 45.0% | |
| CTACACATTGTGGTACGACA+GGG | - | chr5_3:41886896-41886915 | Msa0812060:intron | 45.0% | |
| TACACATTGTGGTACGACAG+GGG | - | chr5_3:41886897-41886916 | Msa0812060:intron | 45.0% | |
| GCTGACCAAAAGAGACTGAA+AGG | + | chr5_3:41886981-41887000 | None:intergenic | 45.0% | |
| TTCTTCACCCATTCGTCGTA+CGG | - | chr5_3:41887029-41887048 | Msa0812060:intron | 45.0% | |
| AGAGCCGTGAATATCCTGAA+AGG | - | chr5_3:41887118-41887137 | Msa0812060:intron | 45.0% | |
| GAGCCGTGAATATCCTGAAA+GGG | - | chr5_3:41887119-41887138 | Msa0812060:intron | 45.0% | |
| AAAGGGATAGGGAACGTGAT+AGG | - | chr5_3:41887184-41887203 | Msa0812060:intron | 45.0% | |
| AAGGGATAGGGAACGTGATA+GGG | - | chr5_3:41887185-41887204 | Msa0812060:intron | 45.0% | |
| ACCGAGATGCTGAAAGATAC+AGG | - | chr5_3:41887238-41887257 | Msa0812060:intron | 45.0% | |
| CCCTGTATCTTTCAGCATCT+CGG | + | chr5_3:41887242-41887261 | None:intergenic | 45.0% | |
| CCGAGATGCTGAAAGATACA+GGG | - | chr5_3:41887239-41887258 | Msa0812060:intron | 45.0% | |
| TGCTGAAAGATACAGGGATC+GGG | - | chr5_3:41887245-41887264 | Msa0812060:intron | 45.0% | |
| CGGGATTATGACAACAGCAT+TGG | - | chr5_3:41887372-41887391 | Msa0812060:intron | 45.0% | |
| !! | ACAGCATTGGCAATGGTAGT+AGG | - | chr5_3:41887385-41887404 | Msa0812060:intron | 45.0% |
| AAGCAAAGGAGATGCCAACA+TGG | - | chr5_3:41887578-41887597 | Msa0812060:intron | 45.0% | |
| !! | TTAGACTTGGTGGCTCTTCT+TGG | - | chr5_3:41887640-41887659 | Msa0812060:intron | 45.0% |
| TGGAGATACAGACTTCTGGC+AGG | - | chr5_3:41882426-41882445 | Msa0812060:intron | 50.0% | |
| CATGTGGAACCATGGATGAC+GGG | - | chr5_3:41882572-41882591 | Msa0812060:intron | 50.0% | |
| ATGTGGAACCATGGATGACG+GGG | - | chr5_3:41882573-41882592 | Msa0812060:intron | 50.0% | |
| CTGCTTGACAGTGAGCTTCA+TGG | + | chr5_3:41882648-41882667 | None:intergenic | 50.0% | |
| CTCACTGTCAAGCAGATGCA+TGG | - | chr5_3:41882653-41882672 | Msa0812060:intron | 50.0% | |
| GGCGTACAGATTACAAGGGA+AGG | + | chr5_3:41883532-41883551 | None:intergenic | 50.0% | |
| CACGGGCGTACAGATTACAA+GGG | + | chr5_3:41883536-41883555 | None:intergenic | 50.0% | |
| GGCGTACAGATTACAAGGGA+AGG | + | chr5_3:41883532-41883551 | None:intergenic | 50.0% | |
| CACGGGCGTACAGATTACAA+GGG | + | chr5_3:41883536-41883555 | None:intergenic | 50.0% | |
| CCACATCTGATATCAGCCAC+GGG | + | chr5_3:41883591-41883610 | None:intergenic | 50.0% | |
| ATAAGAAGCAGGACGTGGGA+AGG | + | chr5_3:41883654-41883673 | None:intergenic | 50.0% | |
| ATCCAAAGACTCTGTGGAGC+TGG | - | chr5_3:41884121-41884140 | Msa0812060:intron | 50.0% | |
| AACCAGCTCCACAGAGTCTT+TGG | + | chr5_3:41884126-41884145 | None:intergenic | 50.0% | |
| GTCATCCGTCCATTAGATCC+AGG | + | chr5_3:41885024-41885043 | None:intergenic | 50.0% | |
| CCTGTCCAAGGAGCAAATCA+CGG | + | chr5_3:41885065-41885084 | None:intergenic | 50.0% | |
| GAGCTCTACTACCAGAATCC+AGG | - | chr5_3:41885300-41885319 | Msa0812060:intron | 50.0% | |
| CTTGTGATGCACCTGGATTC+TGG | + | chr5_3:41885314-41885333 | None:intergenic | 50.0% | |
| ATCCTGTAATGCCCACCTGT+CGG | - | chr5_3:41886030-41886049 | Msa0812060:intron | 50.0% | |
| !!! | CAAAGGCGTTTTACACCGAC+AGG | + | chr5_3:41886048-41886067 | None:intergenic | 50.0% |
| ATTACAGGAACTGGGATGCG+AGG | + | chr5_3:41886835-41886854 | None:intergenic | 50.0% | |
| CCTGACGCATTACAGGAACT+GGG | + | chr5_3:41886843-41886862 | None:intergenic | 50.0% | |
| ACCTGACGCATTACAGGAAC+TGG | + | chr5_3:41886844-41886863 | None:intergenic | 50.0% | |
| ! | TCCTGTAATGCGTCAGGTTG+TGG | - | chr5_3:41886846-41886865 | Msa0812060:five_prime_UTR | 50.0% |
| AGTGTCATCAGAACCGTGAC+GGG | + | chr5_3:41886929-41886948 | None:intergenic | 50.0% | |
| CAGTGTCATCAGAACCGTGA+CGG | + | chr5_3:41886930-41886949 | None:intergenic | 50.0% | |
| TTTCACAGAAGGTGGTCTGC+GGG | + | chr5_3:41886953-41886972 | None:intergenic | 50.0% | |
| CTTTCACAGAAGGTGGTCTG+CGG | + | chr5_3:41886954-41886973 | None:intergenic | 50.0% | |
| GAAAGGGCAGCTTTCACAGA+AGG | + | chr5_3:41886964-41886983 | None:intergenic | 50.0% | |
| ! | GCTGCCCTTTCAGTCTCTTT+TGG | - | chr5_3:41886973-41886992 | Msa0812060:intron | 50.0% |
| GGGTGAAGAATCCCTTGTAG+AGG | + | chr5_3:41887019-41887038 | None:intergenic | 50.0% | |
| CTCTGACTGCGATGATTGCT+GGG | + | chr5_3:41887102-41887121 | None:intergenic | 50.0% | |
| ATCCTGAAAGGGATAGGGAC+AGG | - | chr5_3:41887130-41887149 | Msa0812060:intron | 50.0% | |
| TCCTGAAAGGGATAGGGACA+GGG | - | chr5_3:41887131-41887150 | Msa0812060:intron | 50.0% | |
| CACGTTCCCTATCCCTTTCT+CGG | + | chr5_3:41887182-41887201 | None:intergenic | 50.0% | |
| CTCGGTCCTTGTTCCTATCT+CGG | + | chr5_3:41887224-41887243 | None:intergenic | 50.0% | |
| AAAGATACAGGGATCGGGAC+CGG | - | chr5_3:41887250-41887269 | Msa0812060:intron | 50.0% | |
| ACTATGAGAGGGACAGATCC+AGG | - | chr5_3:41887280-41887299 | Msa0812060:intron | 50.0% | |
| ACGCAGAGAGAGAAAGTAGC+CGG | - | chr5_3:41887352-41887371 | Msa0812060:intron | 50.0% | |
| GTAGGAGTCGGAGTAGAAGT+AGG | - | chr5_3:41887418-41887437 | Msa0812060:intron | 50.0% | |
| !! | TGCCAACTTGGCTCTGACTT+CGG | + | chr5_3:41887452-41887471 | None:intergenic | 50.0% |
| CCACGGGCGTACAGATTACA+AGG | + | chr5_3:41883537-41883556 | None:intergenic | 55.0% | |
| CCTTGTAATCTGTACGCCCG+TGG | - | chr5_3:41883534-41883553 | Msa0812060:intron | 55.0% | |
| CCACGGGCGTACAGATTACA+AGG | + | chr5_3:41883537-41883556 | None:intergenic | 55.0% | |
| CCTTGTAATCTGTACGCCCG+TGG | - | chr5_3:41883534-41883553 | Msa0812060:intron | 55.0% | |
| CCCGTGGCTGATATCAGATG+TGG | - | chr5_3:41883588-41883607 | Msa0812060:intron | 55.0% | |
| !! | CCGTGATTTGCTCCTTGGAC+AGG | - | chr5_3:41885062-41885081 | Msa0812060:CDS | 55.0% |
| ! | GGCGTTTTACACCGACAGGT+GGG | + | chr5_3:41886044-41886063 | None:intergenic | 55.0% |
| ! | AGGCGTTTTACACCGACAGG+TGG | + | chr5_3:41886045-41886064 | None:intergenic | 55.0% |
| CCCAGTTCCTGTAATGCGTC+AGG | - | chr5_3:41886840-41886859 | Msa0812060:five_prime_UTR | 55.0% | |
| GCCACAACCTGACGCATTAC+AGG | + | chr5_3:41886850-41886869 | None:intergenic | 55.0% | |
| ! | GCGTCAGGTTGTGGCAAATC+TGG | - | chr5_3:41886855-41886874 | Msa0812060:five_prime_UTR | 55.0% |
| AGGGCAGCTTTCACAGAAGG+TGG | + | chr5_3:41886961-41886980 | None:intergenic | 55.0% | |
| GCCACATCGAGCCTCTACAA+GGG | - | chr5_3:41887005-41887024 | Msa0812060:intron | 55.0% | |
| TCCCTTGTAGAGGCTCGATG+TGG | + | chr5_3:41887009-41887028 | None:intergenic | 55.0% | |
| ! | GCAGGTACCGTACGACGAAT+GGG | + | chr5_3:41887039-41887058 | None:intergenic | 55.0% |
| ! | AGCAGGTACCGTACGACGAA+TGG | + | chr5_3:41887040-41887059 | None:intergenic | 55.0% |
| GCTCTGACTGCGATGATTGC+TGG | + | chr5_3:41887103-41887122 | None:intergenic | 55.0% | |
| TCCCTGTCCCTATCCCTTTC+AGG | + | chr5_3:41887135-41887154 | None:intergenic | 55.0% | |
| AAAGGGATAGGGACAGGGAG+CGG | - | chr5_3:41887136-41887155 | Msa0812060:intron | 55.0% | |
| ACAGGGACCGAGAAAGGGAT+AGG | - | chr5_3:41887172-41887191 | Msa0812060:intron | 55.0% | |
| CAGGGACCGAGAAAGGGATA+GGG | - | chr5_3:41887173-41887192 | Msa0812060:intron | 55.0% | |
| AAGATACAGGGATCGGGACC+GGG | - | chr5_3:41887251-41887270 | Msa0812060:intron | 55.0% | |
| ACCGGGATAGGGACTATGAG+AGG | - | chr5_3:41887268-41887287 | Msa0812060:intron | 55.0% | |
| CCCTCTCATAGTCCCTATCC+CGG | + | chr5_3:41887272-41887291 | None:intergenic | 55.0% | |
| CCGGGATAGGGACTATGAGA+GGG | - | chr5_3:41887269-41887288 | Msa0812060:intron | 55.0% | |
| ATGAGAGGGACAGATCCAGG+AGG | - | chr5_3:41887283-41887302 | Msa0812060:intron | 55.0% | |
| TGAGAGGGACAGATCCAGGA+GGG | - | chr5_3:41887284-41887303 | Msa0812060:intron | 55.0% | |
| GGACAGATCCAGGAGGGATA+GGG | - | chr5_3:41887290-41887309 | Msa0812060:intron | 55.0% | |
| CGCAGAGAGAGAAAGTAGCC+GGG | - | chr5_3:41887353-41887372 | Msa0812060:intron | 55.0% | |
| TACTCCGACTCCTACTGCGA+TGG | + | chr5_3:41887413-41887432 | None:intergenic | 55.0% | |
| GTCGGAGTAGAAGTAGGAGC+AGG | - | chr5_3:41887424-41887443 | Msa0812060:intron | 55.0% | |
| AGCCGAAGTCAGAGCCAAGT+TGG | - | chr5_3:41887447-41887466 | Msa0812060:intron | 55.0% | |
| !! | GTGGACTAGAGCGTGAGTCA+TGG | + | chr5_3:41887482-41887501 | None:intergenic | 55.0% |
| CGCTCTAGTCCACAGAGAGA+TGG | - | chr5_3:41887489-41887508 | Msa0812060:intron | 55.0% | |
| CGACAGTTCCCCGTCATCCA+TGG | + | chr5_3:41882584-41882603 | None:intergenic | 60.0% | |
| !! | TGGATGACGGGGAACTGTCG+TGG | - | chr5_3:41882584-41882603 | Msa0812060:intron | 60.0% |
| GGAAGGTCGATAGCAGCCAC+GGG | + | chr5_3:41883553-41883572 | None:intergenic | 60.0% | |
| GGGAAGGTCGATAGCAGCCA+CGG | + | chr5_3:41883554-41883573 | None:intergenic | 60.0% | |
| CACCGACAGGTGGGCATTAC+AGG | + | chr5_3:41886035-41886054 | None:intergenic | 60.0% | |
| CCAGCAACTCCCCTATACCC+AGG | + | chr5_3:41886136-41886155 | None:intergenic | 60.0% | |
| CCTGGGTATAGGGGAGTTGC+TGG | - | chr5_3:41886133-41886152 | Msa0812060:intron | 60.0% | |
| ACAGGGGAAACCACCCGTCA+CGG | - | chr5_3:41886913-41886932 | Msa0812060:intron | 60.0% | |
| ! | GTCATCAGAACCGTGACGGG+TGG | + | chr5_3:41886926-41886945 | None:intergenic | 60.0% |
| CGCCACATCGAGCCTCTACA+AGG | - | chr5_3:41887004-41887023 | Msa0812060:intron | 60.0% | |
| CAGGGACAGGGACCGAGAAA+GGG | - | chr5_3:41887167-41887186 | Msa0812060:intron | 60.0% | |
| GGGACAGATCCAGGAGGGAT+AGG | - | chr5_3:41887289-41887308 | Msa0812060:intron | 60.0% | |
| GTAGTAGGCGCCATCGCAGT+AGG | - | chr5_3:41887400-41887419 | Msa0812060:intron | 60.0% | |
| AGAGCGTGAGTCATGGCGTG+CGG | + | chr5_3:41887475-41887494 | None:intergenic | 60.0% | |
| CCTTTCTCGGTCCCTGTCCC+TGG | + | chr5_3:41887169-41887188 | None:intergenic | 65.0% | |
| CCAGGGACAGGGACCGAGAA+AGG | - | chr5_3:41887166-41887185 | Msa0812060:intron | 65.0% | |
| ACAGGGATCGGGACCGGGAT+AGG | - | chr5_3:41887256-41887275 | Msa0812060:intron | 65.0% | |
| CAGGGATCGGGACCGGGATA+GGG | - | chr5_3:41887257-41887276 | Msa0812060:intron | 65.0% | |
| CTCTCGGTCCCTATCCCTCC+TGG | + | chr5_3:41887301-41887320 | None:intergenic | 65.0% | |
| GGCGCCATCGCAGTAGGAGT+CGG | - | chr5_3:41887406-41887425 | Msa0812060:intron | 65.0% | |
| ! | CATGGCGTGCGGTGCCAACT+TGG | + | chr5_3:41887464-41887483 | None:intergenic | 65.0% |
| ACAGGGAGCGGTCACGCTCC+AGG | - | chr5_3:41887148-41887167 | Msa0812060:intron | 70.0% | |
| CAGGGAGCGGTCACGCTCCA+GGG | - | chr5_3:41887149-41887168 | Msa0812060:intron | 70.0% | |
| AGCGGTCACGCTCCAGGGAC+AGG | - | chr5_3:41887154-41887173 | Msa0812060:intron | 70.0% | |
| GCGGTCACGCTCCAGGGACA+GGG | - | chr5_3:41887155-41887174 | Msa0812060:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 41881100 | 41888114 | 41881100 | ID=Msa0812060;Name=Msa0812060 |
| chr5_3 | mRNA | 41881100 | 41888114 | 41881100 | ID=Msa0812060-mRNA-1;Parent=Msa0812060;Name=Msa0812060-mRNA-1;_AED=0.14;_eAED=0.14;_QI=221|0.83|0.85|1|0.66|0.57|7|443|460 |
| chr5_3 | exon | 41881100 | 41882403 | 41881100 | ID=Msa0812060-mRNA-1:exon:12851;Parent=Msa0812060-mRNA-1 |
| chr5_3 | exon | 41883833 | 41883913 | 41883833 | ID=Msa0812060-mRNA-1:exon:12850;Parent=Msa0812060-mRNA-1 |
| chr5_3 | exon | 41884131 | 41884202 | 41884131 | ID=Msa0812060-mRNA-1:exon:12849;Parent=Msa0812060-mRNA-1 |
| chr5_3 | exon | 41885044 | 41885124 | 41885044 | ID=Msa0812060-mRNA-1:exon:12848;Parent=Msa0812060-mRNA-1 |
| chr5_3 | exon | 41886502 | 41886893 | 41886502 | ID=Msa0812060-mRNA-1:exon:12847;Parent=Msa0812060-mRNA-1 |
| chr5_3 | exon | 41887898 | 41887954 | 41887898 | ID=Msa0812060-mRNA-1:exon:12846;Parent=Msa0812060-mRNA-1 |
| chr5_3 | exon | 41888055 | 41888114 | 41888055 | ID=Msa0812060-mRNA-1:exon:12845;Parent=Msa0812060-mRNA-1 |
| chr5_3 | five_prime_UTR | 41888055 | 41888114 | 41888055 | ID=Msa0812060-mRNA-1:five_prime_utr;Parent=Msa0812060-mRNA-1 |
| chr5_3 | five_prime_UTR | 41887898 | 41887954 | 41887898 | ID=Msa0812060-mRNA-1:five_prime_utr;Parent=Msa0812060-mRNA-1 |
| chr5_3 | five_prime_UTR | 41886790 | 41886893 | 41886790 | ID=Msa0812060-mRNA-1:five_prime_utr;Parent=Msa0812060-mRNA-1 |
| chr5_3 | CDS | 41886502 | 41886789 | 41886502 | ID=Msa0812060-mRNA-1:cds;Parent=Msa0812060-mRNA-1 |
| chr5_3 | CDS | 41885044 | 41885124 | 41885044 | ID=Msa0812060-mRNA-1:cds;Parent=Msa0812060-mRNA-1 |
| chr5_3 | CDS | 41884131 | 41884202 | 41884131 | ID=Msa0812060-mRNA-1:cds;Parent=Msa0812060-mRNA-1 |
| chr5_3 | CDS | 41883833 | 41883913 | 41883833 | ID=Msa0812060-mRNA-1:cds;Parent=Msa0812060-mRNA-1 |
| chr5_3 | CDS | 41881543 | 41882403 | 41881543 | ID=Msa0812060-mRNA-1:cds;Parent=Msa0812060-mRNA-1 |
| chr5_3 | three_prime_UTR | 41881100 | 41881542 | 41881100 | ID=Msa0812060-mRNA-1:three_prime_utr;Parent=Msa0812060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
